Pregenerated sensors for CPLX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039714Ensembl transcript IDs: ENSMUST00000045068.10, ENSMUST00000215487.2, ENSMUST00000217015.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAGGTCTTCTGTGTGCCCAGAGGCTCTCCTAAGGGCCTCTGGGTaGTGGTATCTGGAGGGGCTGGGAGCCCAGGAGACGTGTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: SRSSVCPEALLRASG*WYLEGLGAQETCVC Trigger: ACAGACACACGTCTCCTGGGCTCCCAGCCCCTCCAGATACCAGCACCCAGAGGCCCTTAGGAGAGCCTCTGGGCACACAGAAGACCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR CCA 90 bp | AGGTCTTCTGTGTGCCCAGAGGCTCTCCTAAGGGCCTCTGGGTGCTaGTATCTGGAGGGGCTGGGAGCCCAGGAGACGTGTGTCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RSSVCPEALLRASGC*YLEGLGAQETCVCV Trigger: CACACAGACACACGTCTCCTGGGCTCCCAGCCCCTCCAGATACCAGCACCCAGAGGCCCTTAGGAGAGCCTCTGGGCACACAGAAGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR CCA 90 bp | AGGAACAGAACACAGTTTGGCTCAGCCCTGGGCCCAGAGGAGGCCTaGAGCTACTGTTCAGTGCCAGCTCCATCCCTGGCACTCTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: RNRTQFGSALGPEEA*SYCSVPAPSLALCP Trigger: GGGGCAGAGTGCCAGGGATGGAGCTGGCACTGAACAGTAGCTCCAGGCCTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGTTCTGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR GCA 90 bp | TGGTATCTGGAGGGGCTGGGAGCCCAGGAGACGTGTGTCTGTGTGTaGCAGGATGCATCTGTGGCAAATGAGCCAGGGCTTCTGTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: WYLEGLGAQETCVCV*QDASVANEPGLLCP Trigger: AGGACACAGAAGCCCTGGCTCATTTGCCACAGATGCATCCTGGCACACACAGACACACGTCTCCTGGGCTCCCAGCCCCTCCAGATACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR TCA 90 bp | GGCAGGGAAAGCAGAGTCCAAAATGGACTGGAGGTATCCGGAAGTTaGGACACTCACTCTCTTAGCCCTCATGTGGACCAGCCCTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GRESRVQNGLEVSGS*DTHSLSPHVDQPSG Trigger: GCCAGAGGGCTGGTCCACATGAGGGCTAAGAGAGTGAGTGTCTCAACTTCCGGATACCTCCAGTCCATTTTGGACTCTGCTTTCCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000217015.2 |
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| 3UTR CCA 90 bp | TGGAGGTATCCGGAAGTTGAGACACTCACTCTCTTAGCCCTCATGTaGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: WRYPEVETLTLLALM*TSPLAILEENPGGS Trigger: ACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAGGGCTAAGAGAGTGAGTGTCTCAACTTCCGGATACCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045068.10 ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR CCA 90 bp | AATCCAGAGAATTCTACAGGAACAGAACACAGTTTGGCTCAGCCCTaGGCCCAGAGGAGGCCTGGAGCTACTGTTCAGTGCCAGCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: NPENSTGTEHSLAQP*AQRRPGATVQCQLH Trigger: ATGGAGCTGGCACTGAACAGTAGCTCCAGGCCTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCTGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR CCA 90 bp | CTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATATaGCACTTCTCAGCTGATTGCTTGAGGTCCCCTAGTGTAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LAILEENPGGSGHMI*HFSADCLRSPSVVW Trigger: CCAGACTACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR CCA 90 bp | TCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAACACAGTTTaGCTCAGCCCTGGGCCCAGAGGAGGCCTGGAGCTACTGTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SNYGIQRILQEQNTV*LSPGPRGGLELLFS Trigger: ACTGAACAGTAGCTCCAGGCCTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR TCA 90 bp | AAAACCATCTGTAACTCCAGGCACAGGGCATCTGACGCCTTGTTCTaGCCTCCTTGGTCACCAAGCACACATGAGCAAAGACATGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: KTICNSRHRASDALF*PPWSPSTHEQRHVC Trigger: GCACACATGTCTTTGCTCATGTGTGCTTGGTGACCAAGGAGGTCAGAACAAGGCGTCAGATGCCCTGTGCCTGGAGTTACAGATGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR GCA 90 bp | AATCCAGGGGGAAGTGGTCACATGATATGGCACTTCTCAGCTGATTaGTTGAGGTCCCCTAGTGTAGTCTGGGCTTTGTCCTTGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: NPGGSGHMIWHFSAD*LRSPSVVWALSLSE Trigger: CTCACTCAAGGACAAAGCCCAGACTACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR GCA 90 bp | CCCTGCCCAAGAAGGGATGTGGGCTCTATTCTGAGTGGCCAGGAATaGCAATCAGGAGAGAATTTTGGAAATCACTCAGTCCATTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: PCPRRDVGSILSGQE*QSGENFGNHSVHSH Trigger: ATGGGAATGGACTGAGTGATTTCCAAAATTCTCTCCTGATTGGCATTCCTGGCCACTCAGAATAGAGCCCACATCCCTTCTTGGGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR GCA 90 bp | GGGAACACAGAGAGAGAAGAAAACCCGGCAGAAACTGAAACACACTaGCTAAACACAAACTTTGAGGACACCAGCTTGCCATCTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GNTEREENPAETETH*LNTNFEDTSLPSQA Trigger: GGCCTGAGATGGCAAGCTGGTGTCCTCAAAGTTTGTGTTTAGGCAGTGTGTTTCAGTTTCTGCCGGGTTTTCTTCTCTCTCTGTGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR TCA 90 bp | GGCTCAGTGCTTTTCCAGACACAGATTCAATTCTCAGCACCCACATaGCAACTCAAAACCATCTGTAACTCCAGGCACAGGGCATCTGAC | + |
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Preference number: 1 (lower is better) Translates to: GSVLFQTQIQFSAPT*QLKTICNSRHRASD Trigger: GTCAGATGCCCTGTGCCTGGAGTTACAGATGGTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAAAGCACTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATACTAGGCCAGGGAGGCTaGCCAGCTGCCCGAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: TSPLAILEENPGGSGHMILGQGG*PAARAQ Trigger: CTGTGCTCGGGCAGCTGGCCAGCCTCCCTGGCCTAG...TATCATGTGACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR CAA 90 bp | TCAGCTGATTGCTTGAGGTCCCCTAGTGTAGTCTGGGCTTTGTCCTaGAGTGAGCTGAGGTCTAGGCCAGGGAGGCTGGCCAGCTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: SADCLRSPSVVWALS*SELRSRPGRLASCP Trigger: CGGGCAGCTGGCCAGCCTCCCTGGCCTAGACCTCAGCTCACTCAAGGACAAAGCCCAGACTACACTAGGGGACCTCAAGCAATCAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGAGGCCTGGAGCTACTGTTCAGTGCCAGCTCCATCCCTGGCACTCTGCTGCATCTGTGGCAAATaGGCCAGGGCTTCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PEEAWSYCSVPAPSLALCCICGK*ARASVS Trigger: GGACACAGAAGCCCTGGCTCATTTGCCACAGATGCA...GCAGAGTGCCAGGGATGGAGCTGGCACTGAACAGTAGCTCCAGGCCTCCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAATTCTACAGGAACAGAACACAGTTTGGCTCAGCCCTGGGCCCAGAGGAGCTGGGTGCTGGTATCTaGAGGGGCTGGGAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: REFYRNRTQFGSALGPEELGAGI*RGWEPR Trigger: CCTGGGCTCCCAGCCCCTCCAGATACCAGCACCCAG...CTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAATCCAGGGGGAAGTGGTCACATGATATGGCACTTCTCAGCTGATTGCCTAGGCCAGGGAGGCTaGCCAGCTGCCCGAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: EENPGGSGHMIWHFSADCLGQGG*PAARAQ Trigger: CTGTGCTCGGGCAGCTGGCCAGCCTCCCTGGCCTAG...GCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGGATTCTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR CAA 90 bp | CACTTCTCAGCTGATTGCTTGAGGTCCCCTAGTGTAGTCTGGGCTTaGTCCTTGAGTGAGCTGAGGTCTAGGCCAGGGAGGCTGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HFSADCLRSPSVVWA*SLSELRSRPGRLAS Trigger: GCTGGCCAGCCTCCCTGGCCTAGACCTCAGCTCACTCAAGGACAAAGCCCAGACTACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGGGAACACAGAGAGAGAAGAAAACCCGGCAGAAACTGAAACACACTGCTGCTGGGACTGCAGCTaGTGCCCTGCCCAAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GRGNTEREENPAETETHCCWDCS*CPAQEG Trigger: CCCTTCTTGGGCAGGGCAGCAGCTGCAGTCCCAGCA...GCAGTGTGTTTCAGTTTCTGCCGGGTTTTCTTCTCTCTCTGTGTTCCCCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGGAACACAGAGAGAGAAGAAAACCCGGCAGAAACTGAAACACACTGCGGTATCTGGAGGGGCTaGGAGCCCAGGAGACGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GRGNTEREENPAETETHCGIWRG*EPRRRV Trigger: CACACGTCTCCTGGGCTCCCAGCCCCTCCAGATACC...GCAGTGTGTTTCAGTTTCTGCCGGGTTTTCTTCTCTCTCTGTGTTCCCCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR TCA 90 bp | GAGATCCCATCTCTAAGACAAAGGGGCTGGAGAGAGGGCTCAGTGCTTTTCCAGTCTGACGCCTTGTTCTaGCCTCCTTGGTCACCAAGC | + |
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Preference number: 2 (lower is better) Translates to: EIPSLRQRGWREGSVLFQSDALF*PPWSPS Trigger: GCTTGGTGACCAAGGAGGTCAGAACAAGGCGTCAGA...CTGGAAAAGCACTGAGCCCTCTCTCCAGCCCCTTTGTCTTAGAGATGGGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGAGAGGGCTCAGTGCTTTTCCAGACACAGATTCAATTCTCAGCACCCACCCCCTCACACAGCATTaGTCAGCTCCCAGAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: LERGLSAFPDTDSILSTHPLTQH*SAPRTH Trigger: GTGGGTTCTGGGAGCTGAGCAATGCTGTGTGAGGGG...GTGGGTGCTGAGAATTGAATCTGTGTCTGGAAAAGCACTGAGCCCTCTCTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR GCA 90 bp | AAGGGGCTGGAGAGAGGGCTCAGTGCTTTTCCAGACACAGATTCAATTCTCAGCCCATCCCTGGCACTCTaGCCCTCACACAGCATTGCT | + |
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Preference number: 2 (lower is better) Translates to: KGLERGLSAFPDTDSILSPSLAL*PSHSIA Trigger: AGCAATGCTGTGTGAGGGGCAGAGTGCCAGGGATGG...GCTGAGAATTGAATCTGTGTCTGGAAAAGCACTGAGCCCTCTCTCCAGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCCTCATGTGGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGACACTTCTCAGCTGATTaGTTGAGGTCCCCTAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LALMWTSPLAILEENPGGHFSAD*LRSPSV Trigger: TACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTG...TCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAGGGCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATGTGGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACTTCTCAGCTGATTaGTTGAGGTCCCCTAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LMWTSPLAILEENPGGSGHFSAD*LRSPSV Trigger: TACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTG...ACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCAGAGACAGCCCTTTCTCTAGTCTCAGGAACACCCTAAGCTCCATCTTCACCTCTCCATCCAGATaGCTGCCACACCCTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GVRDSPFSSLRNTLSSIFTSPSR*LPHPPH Trigger: GTGAGGAGGGTGTGGCAGCCATCTGGATGGAGAGGT...GAAGATGGAGCTTAGGGTGTTCCTGAGACTAGAGAAAGGGCTGTCTCTGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGCTGGAGAGAGGGCTCAGTGCTTTTCCAGACACAGATTCAATTCTCAGCGAGGGGCTGTGGGTGTaGCTGAGTGGCAGACCATTT | + |
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Preference number: 2 (lower is better) Translates to: KGLERGLSAFPDTDSILSEGLWV*LSGRPF Trigger: AAATGGTCTGCCACTCAGCCACACCCACAGCCCCTC...GCTGAGAATTGAATCTGTGTCTGGAAAAGCACTGAGCCCTCTCTCCAGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR CAA 90 bp | CCAGGGGGAAGTGGTCACATGATATGGCACTTCTCAGCTGATTGCTaGAGGTCCCCTAGTGTAGTCTGGGCTTTGTCCTTGAGTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PGGSGHMIWHFSADC*RSPSVVWALSLSEL Trigger: CAGCTCACTCAAGGACAAAGCCCAGACTACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGGCTGGAGAGAGGGCTCAGTGCTTTTCCAGACACAGATTCAATTCTCAGCAGCAGGTCTTCTGTGTaGCCAGAGGCTCTCCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: KGLERGLSAFPDTDSILSSRSSV*PEALLR Trigger: CCTTAGGAGAGCCTCTGGGCACACAGAAGACCTGCT...GCTGAGAATTGAATCTGTGTCTGGAAAAGCACTGAGCCCTCTCTCCAGCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAACACAGAGAGAGAAGAAAACCCGGCAGAAACTGAAACACACTGCCTAAACGCACTACCAAGGAGGTaGGGGTGGGGGACAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: GNTEREENPAETETHCLNALPRR*GWGTNG Trigger: GCCATTTGTCCCCCACCCCCACCTCCTTGGTAGTGC...GTTTAGGCAGTGTGTTTCAGTTTCTGCCGGGTTTTCTTCTCTCTCTGTGTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATATCCCCTAGTGTAGTCTaGGCTTTGTCCTTGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TSPLAILEENPGGSGHMISPSVV*ALSLSE Trigger: CTCACTCAAGGACAAAGCCCAGACTACACTAGGGGA...TATCATGTGACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
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| 3UTR CAA 90 bp | TTCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAACACAGTTaGGCTCAGCCCTGGGCCCAGAGGAGGCCTGGAGCTACTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: FQLWNPENSTGTEHS*AQPWAQRRPGATVQ Trigger: CTGAACAGTAGCTCCAGGCCTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGACACAGATTCAATTCTCAGCACCCACATGACAACTCAAAACCATCTGCAGGCCTGGGGCCTGTaGACCCCAAGTCAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FPDTDSILSTHMTTQNHLQAWGL*TPSQQE Trigger: TTCCTGCTGACTTGGGGTTCACAGGCCCCAGGCCTG...CAGATGGTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGCTGGAGAGAGGGCTCAGTGCTTTTCCAGACACAGATTCAATTCTCAGCGTCACCAAGCACACATaGGCAAAGACATGTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KGLERGLSAFPDTDSILSVTKHT*AKTCVQ Trigger: CTGCACACATGTCTTTGCTCATGTGTGCTTGGTGAC...GCTGAGAATTGAATCTGTGTCTGGAAAAGCACTGAGCCCTCTCTCCAGCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTGAGGTGGGACTAACACTGTCTTCACCACCAGGTCTCACTCAGTGTAGCCTGAGTGGCCAGGAATaGCAATCAGGAGAGAATTTT | + |
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Preference number: 2 (lower is better) Translates to: PCEVGLTLSSPPGLTQCSLSGQE*QSGENF Trigger: AAAATTCTCTCCTGATTGGCATTCCTGGCCACTCAG...GCTACACTGAGTGAGACCTGGTGGTGAAGACAGTGTTAGTCCCACCTCACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR GCA 90 bp | GGGAACACAGAGAGAGAAGAAAACCCGGCAGAAACTGAAACACACTGCCTAAACCTCCATCCAGATGGCTaGCACACCCTCCTCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: GNTEREENPAETETHCLNLHPDG*HTLLTL Trigger: AAGAGTGAGGAGGGTGTGGCAGCCATCTGGATGGAG...GTTTAGGCAGTGTGTTTCAGTTTCTGCCGGGTTTTCTTCTCTCTCTGTGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAACACAGTTTGGCTCAGCGGCCCAGAGGAGGCCTaGAGCTACTGTTCAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SNYGIQRILQEQNTVWLSGPEEA*SYCSVP Trigger: TGGCACTGAACAGTAGCTCCAGGCCTCCTCTGGGCC...GCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR CAA 90 bp | GGAAACTTTCCAGGCAGCGGAGGGAGAGAGGGAAGAATGGGAACTTaGCTGACAATAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: GNFPGSGGREGRMGT*LTIKRERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTATTGTCAGCAAAGTTCCCATTCTTCCCTCTCTCCCTCCGCTGCCTGGAAAGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGAAGAAAACCCGGCAGAAACTGAAACACACTGCCTAAACACAAACTTTGGCCCCACCCTCACCTaGAGCCCTGATTCTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: EREENPAETETHCLNTNFGPTLT*SPDSLL Trigger: TAGGAGAGAATCAGGGCTGCAGGTGAGGGTGGGGCC...AAAGTTTGTGTTTAGGCAGTGTGTTTCAGTTTCTGCCGGGTTTTCTTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTGCCACACCCTCCTCACTCTTAGTGCTTAGACTTAACTTCATCTGGCCATTCTGTGTCCTCTTGTaGGTGCTCTTGTGTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: MAATPSSLLVLRLNFIWPFCVLL*VLLCEE Trigger: TTCTTCACACAAGAGCACTCACAAGAGGACACAGAA...TGGCCAGATGAAGTTAAGTCTAAGCACTAAGAGTGAGGAGGGTGTGGCAGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAACACAGTTTGGCTCAGCGGGCTCTATTCTGAGTaGCCAGGAATGCCAATCAGG | + |
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Preference number: 2 (lower is better) Translates to: SNYGIQRILQEQNTVWLSGLYSE*PGMPIR Trigger: CCTGATTGGCATTCCTGGCCACTCAGAATAGAGCCC...GCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR CCA 90 bp | AACGAGAAGAGGAAATTCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAATGCCAGCTCCATCCCTaGCACTCTGCCCCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: NEKRKFQLWNPENSTGTECQLHP*HSAPHT Trigger: TGTGTGAGGGGCAGAGTGCCAGGGATGGAGCTGGCA...TTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGAATTTCCTCTTCTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGACACAGATTCAATTCTCAGCACCCACATGACAACTCAAAACCATCTGGTGAGTGCTCTTGTGTaGAGAACAGGAGGCTGTACC | + |
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Preference number: 2 (lower is better) Translates to: FPDTDSILSTHMTTQNHLVSALV*RTGGCT Trigger: GGTACAGCCTCCTGTTCTTCACACAAGAGCACTCAC...CAGATGGTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGACACAGATTCAATTCTCAGCACCCACATGACAACTCAAAACCATCTGGGGTACTTGGGAAGTTaGGGCAAGATGATCAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FPDTDSILSTHMTTQNHLGYLGS*GKMIRS Trigger: GCTTCTGATCATCTTGCCTCAACTTCCCAAGTACCC...CAGATGGTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGAGAGAGGGCTCAGTGCTTTTCCAGACACAGATTCAATTCTCAGCACCCACACAAATGGCTACTCTTTaGAACACGTATTATTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: WREGSVLFQTQIQFSAPTQMATL*NTYYSW Trigger: CCAAGAATAATACGTGTTTCAAAGAGTAGCCATTTG...TGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAAAGCACTGAGCCCTCTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCTTTTCCAGACACAGATTCAATTCTCAGCACCCACATGACAACTCAAAACAAACCCGGCAGAAACTaGAACACACTGCCTAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: SAFPDTDSILSTHMTTQNKPGRN*NTLPKH Trigger: GTGTTTAGGCAGTGTGTTTCAGTTTCTGCCGGGTTT...GTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAAAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR-3UTR CCA 90 bp | AACGAGAAGAGGAAATTCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAAATCAGGAGAGAATTTTaGAAATCACTCAGTCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: NEKRKFQLWNPENSTGTEIRREF*KSLSPF Trigger: GAATGGACTGAGTGATTTCCAAAATTCTCTCCTGAT...TTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGAATTTCCTCTTCTCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR CCA 72 bp | GTGTGCCCAGAGGCTCTCCTAAGGGCCTCTGGGTGCTaGTATCTGGAGGGGCTGGGAGCCCAGGAGACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCPEALLRASGC*YLEGLGAQETC Trigger: ACACGTCTCCTGGGCTCCCAGCCCCTCCAGATACCAGCACCCAGAGGCCCTTAGGAGAGCCTCTGGGCACAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR GCA 72 bp | AGTGAGCTGAGGTCTAGGCCAGGGAGGCTGGCCAGCTaGCCGAGCACAGAGGCCTTATCCTCCTCTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SELRSRPGRLAS*PSTEALSSSSS Trigger: GGAGGAAGAGGAGGATAAGGCCTCTGTGCTCGGGCAGCTGGCCAGCCTCCCTGGCCTAGACCTCAGCTCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
||
| 3UTR CCA 72 bp | GTCTTCTGTGTGCCCAGAGGCTCTCCTAAGGGCCTCTaGGTGCTGGTATCTGGAGGGGCTGGGAGCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VFCVPRGSPKGL*VLVSGGAGSPG Trigger: TCCTGGGCTCCCAGCCCCTCCAGATACCAGCACCCAGAGGCCCTTAGGAGAGCCTCTGGGCACACAGAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR CCA 72 bp | ACACAGTTTGGCTCAGCCCTGGGCCCAGAGGAGGCCTaGAGCTACTGTTCAGTGCCAGCTCCATCCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TQFGSALGPEEA*SYCSVPAPSLA Trigger: TGCCAGGGATGGAGCTGGCACTGAACAGTAGCTCCAGGCCTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR TCA 72 bp | CTGAGTGGCAGACCATTTGCCTTAGTATGCAGTGTGTaGGGCCCTGGGTCCCCCAGCACTACCAAGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSGRPFALVCSV*GPGSPSTTKEV Trigger: CACCTCCTTGGTAGTGCTGGGGGACCCAGGGCCTCACACACTGCATACTAAGGCAAATGGTCTGCCACTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR TCA 72 bp | GAGGACACCAGCTTGCCATCTCAGGCCACCTCCCTGTaGGGTGGGACTAACACTGTCTTCACCACCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EDTSLPSQATSL*GGTNTVFTTRS Trigger: AGACCTGGTGGTGAAGACAGTGTTAGTCCCACCTCACAGGGAGGTGGCCTGAGATGGCAAGCTGGTGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR GCA 72 bp | GTGCTTAGACTTAACTTCATCTGGCCAAAGGGCATCTaGTCCCTCAGTGAGGCCCCACCCTCACCTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLRLNFIWPKGI*SLSEAPPSPAA Trigger: GGCTGCAGGTGAGGGTGGGGCCTCACTGAGGGAGCAGATGCCCTTTGGCCAGATGAAGTTAAGTCTAAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR TCA 72 bp | CCAGGGCTTCTGTGTCCTCTTGTGAGTGCTCTTGTGTaGAGAACAGGAGGCTGTACCCAGAAAGGGTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PGLLCPLVSALV*RTGGCTQKGLG Trigger: GCCCAACCCTTTCTGGGTACAGCCTCCTGTTCTTCACACAAGAGCACTCACAAGAGGACACAGAAGCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR GCA 72 bp | GATCATAAAGGTAGGGATAAGAGCAGGTCTTCTGTGTaGCCAGAGGCTCTCCTAAGGGCCTCTGGGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DHKGRDKSRSSV*PEALLRASGCW Trigger: CCAGCACCCAGAGGCCCTTAGGAGAGCCTCTGGGCACACAGAAGACCTGCTCTTATCCCTACCTTTATGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR CCA 72 bp | CCGGAAGTTGAGACACTCACTCTCTTAGCCCTCATGTaGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: PEVETLTLLALM*TSPLAILEENP Trigger: TGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAGGGCTAAGAGAGTGAGTGTCTCAACTTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045068.10 ENSMUST00000215487.2 ENSMUST00000217015.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGCCAAAGGGCATCTGCTCCCTCAGTGAGGCCCCACCCTCACCTGCAGCCCAATCAGGAGAGAATTTaGGAAATCACTCAGTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: SGQRASAPSVRPHPHLQPNQERI*EITQSI Trigger: AATGGACTGAGTGATTTCCAAAATTCTCTCCTGATT...GGGCTGCAGGTGAGGGTGGGGCCTCACTGAGGGAGCAGATGCCCTTTGGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGAATCCAGGGGGAAGTGGTCACATGATATGGCACTTCTCAGCTGATTGCGTCTGGGCTTTGTCCTaGAGTGAGCTGAGGTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: EENPGGSGHMIWHFSADCVWALS*SELRSR Trigger: CCTAGACCTCAGCTCACTCAAGGACAAAGCCCAGAC...GCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGGATTCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
||
| 3UTR TCA 72 bp | TGCTGCCCTGCCCAAGAAGGGATGTGGGCTCTATTCTaGGTGGCCAGGAATGCCAATCAGGAGAGAATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CCPAQEGMWALF*VARNANQERIL Trigger: CAAAATTCTCTCCTGATTGGCATTCCTGGCCACTCAGAATAGAGCCCACATCCCTTCTTGGGCAGGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR TCA 72 bp | TGTAACTCCAGGCACAGGGCATCTGACGCCTTGTTCTaGCCTCCTTGGTCACCAAGCACACATGAGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CNSRHRASDALF*PPWSPSTHEQR Trigger: TCTTTGCTCATGTGTGCTTGGTGACCAAGGAGGTCAGAACAAGGCGTCAGATGCCCTGTGCCTGGAGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR GCA 72 bp | GGAAGTGGTCACATGATATGGCACTTCTCAGCTGATTaGTTGAGGTCCCCTAGTGTAGTCTGGGCTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSGHMIWHFSAD*LRSPSVVWALS Trigger: GGACAAAGCCCAGACTACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
||
| 3UTR CCA 72 bp | CTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATATaGCACTTCTCAGCTGATTGCTTGAGGTCCCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LEENPGGSGHMI*HFSADCLRSPS Trigger: ACTAGGGGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGGATTCTCCTCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
||
| 3UTR GCA 72 bp | ACCAAACACAGGAGAAGGATGCAGCCTGTTGGTGCGTaGCTAACATGTACAAAGGCCTTGGTTAGGTTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: TKHRRRMQPVGA*LTCTKALVRFE Trigger: TTCGAACCTAACCAAGGCCTTTGTACATGTTAGGCACGCACCAACAGGCTGCATCCTTCTCCTGTGTTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAATTCTACAGGAACAGAACACAGTTTGGCTCAGCCCTGGGCCCAGAGGAGGGAAGAATGGGAACTTaGCTGACAATAAAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: REFYRNRTQFGSALGPEEGRMGT*LTIKRE Trigger: CTCTCTCTTTATTGTCAGCAAAGTTCCCATTCTTCC...CTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR CCA 72 bp | TTGTGTGAAGAACAGGAGGCTGTACCCAGAAAGGGTTaGGCTAATTCTATCAACTCGGGGAAACTTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LCEEQEAVPRKG*ANSINSGKLSR Trigger: CCTGGAAAGTTTCCCCGAGTTGATAGAATTAGCCCAACCCTTTCTGGGTACAGCCTCCTGTTCTTCACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGGGGAACACAGAGAGAGAAGAAAACCCGGCAGAAACTGAAACACACTGCAAACACGTATTATTCTaGGGGAGGAGAACTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GRGNTEREENPAETETHCKHVLF*GRRTLH Trigger: ATGAAGAGTTCTCCTCCCCAAGAATAATACGTGTTT...GCAGTGTGTTTCAGTTTCTGCCGGGTTTTCTTCTCTCTCTGTGTTCCCCCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR GCA 72 bp | AGAAGGGATGTGGGCTCTATTCTGAGTGGCCAGGAATaGCAATCAGGAGAGAATTTTGGAAATCACTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RRDVGSILSGQE*QSGENFGNHSV Trigger: GACTGAGTGATTTCCAAAATTCTCTCCTGATTGGCATTCCTGGCCACTCAGAATAGAGCCCACATCCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR CCA 72 bp | TACATAGTGTTGCTGCACATCTGTAATCCTAGCACTTaGGAGGCTAGCTTGGGCTACATAGTGAGATCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: YIVLLHICNPST*EASLGYIVRSH Trigger: ATGGGATCTCACTATGTAGCCCAAGCTAGCCTCCCAAGTGCTAGGATTACAGATGTGCAGCAACACTATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| 3UTR TCA 72 bp | CTTTTCCAGACACAGATTCAATTCTCAGCACCCACATaGCAACTCAAAACCATCTGTAACTCCAGGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFQTQIQFSAPT*QLKTICNSRHR Trigger: CCTGTGCCTGGAGTTACAGATGGTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGCCAAAGGGCATCTGCTCCCTCAGTGAGGCCCCACCCTCACCTGCAGCCCCCCCCAGGCTCCCTGTaGGGTTCTTCAGTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGQRASAPSVRPHPHLQPPPGSL*GSSVGH Trigger: GTGGCCAACTGAAGAACCTCACAGGGAGCCTGGGGG...GGGCTGCAGGTGAGGGTGGGGCCTCACTGAGGGAGCAGATGCCCTTTGGCCAGA 66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR CCA 90 bp | CCTCATGTGGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGCTAGGCCAGGGAGGCTaGCCAGCTGCCCGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PHVDQPSGHPRGESRGKWLGQGG*PAARAQ Trigger: CTGTGCTCGGGCAGCTGGCCAGCCTCCCTGGCCTAG...CCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR GCA 90 bp | CTGGCCAGCTGCCCGAGCACAGAGGCCTTATCCTCCTCTTCCTCCGTATCCTCCTCGGCTCATGCCCTGTaGTTCGGCTGCAGACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LASCPSTEALSSSSSVSSSAHAL*FGCRLV Trigger: GACAAGTCTGCAGCCGAAGCACAGGGCATGAGCCGA...GGAGGATACGGAGGAAGAGGAGGATAAGGCCTCTGTGCTCGGGCAGCTGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCAGCTGCCCGAGCACAGAGGCCTTATCCTCCTCTTCCTCCGTATCCTCACTCTTCTCGGCTCATaGCCTGTGCTTCGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGQLPEHRGLILLFLRILTLLGS*PVLRLQ Trigger: CTGCAGCCGAAGCACAGGGCATGAGCCGAGAAGAGT...GAGGATACGGAGGAAGAGGAGGATAAGGCCTCTGTGCTCGGGCAGCTGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCCAGCTGCCCGAGCACAGAGGCCTTATCCTCCTCTTCCTCCGTATCCTCCCTCCACATCTCCGCCTaGCAGCTGGATCTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LASCPSTEALSSSSSVSSLHISA*QLDLAF Trigger: GAAAGCCAGATCCAGCTGGCAGGCGGAGATGTGGAG...GGAGGATACGGAGGAAGAGGAGGATAAGGCCTCTGTGCTCGGGCAGCTGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGAGGCCTGGAGCTACTGTTCAGTGCCAGCTCCATCCCTGGCACTCTGCAGTGACTTCGCAGTGTaGCCCGCTCTGCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEEAWSYCSVPAPSLALCSDFAV*PALPSS Trigger: AGAGGAAGGCAGAGCGGGCCACACTGCGAAGTCACT...GCAGAGTGCCAGGGATGGAGCTGGCACTGAACAGTAGCTCCAGGCCTCCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR GCA 90 bp | CCTCATGTGGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCGGCTCATGCCCTGTaGTTCGGCTGCAGACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PHVDQPSGHPRGESRGKWSAHAL*FGCRLV Trigger: GACAAGTCTGCAGCCGAAGCACAGGGCATGAGCCGA...CCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000215487.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCCAAAGGGCATCTGCTCCCTCAGTGAGGCCCCACCCTCACCTGCAGCCCTCCCCTAGTGTAGTCTaGGCTTTGTCCTTGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGQRASAPSVRPHPHLQPSPSVV*ALSLSE Trigger: CTCACTCAAGGACAAAGCCCAGACTACACTAGGGGA...GGGCTGCAGGTGAGGGTGGGGCCTCACTGAGGGAGCAGATGCCCTTTGGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAATCCAGGGGGAAGTGGTCACATGATATGGCACTTCTCAGCTGATTGCCCCCCAGGCTCCCTGTaGGGTTCTTCAGTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EENPGGSGHMIWHFSADCPPGSL*GSSVGH Trigger: GTGGCCAACTGAAGAACCTCACAGGGAGCCTGGGGG...GCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGGATTCTCCTC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATATGCTCCACATCTCCGCCTaGCAGCTGGATCTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPSGHPRGESRGKWSHDMLHISA*QLDLAF Trigger: GAAAGCCAGATCCAGCTGGCAGGCGGAGATGTGGAG...CATATCATGTGACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215487.2 ENSMUST00000217015.2 |
||
| CDS-3UTR TCA 90 bp | CATCTCAGGCCACCTCCCTGTGAGGTGGGACTAACACTGTCTTCACCACCAGGTTATTTGTCTCTGAAGTaGCTTCGCAGTGTGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLRPPPCEVGLTLSSPPGYLSLK*LRSVAR Trigger: GCGGGCCACACTGCGAAGTCACTTCAGAGACAAATA...ACCTGGTGGTGAAGACAGTGTTAGTCCCACCTCACAGGGAGGTGGCCTGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAATTCTACAGGAACAGAACACAGTTTGGCTCAGCCCTGGGCCCAGAGGAGACTCTTCTCGGCTCATaGCCTGTGCTTCGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: REFYRNRTQFGSALGPEETLLGS*PVLRLQ Trigger: CTGCAGCCGAAGCACAGGGCATGAGCCGAGAAGAGT...CTCCTCTGGGCCCAGGGCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR CCA 90 bp | AGGACACCAGCTTGCCATCTCAGGCCACCTCCCTGTGAGGTGGGACTAACACTGCCTGCCAGCTGGATCTaGCTTTCATCTGTTTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTPACHLRPPPCEVGLTLPASWI*LSSVSF Trigger: GAACGAAACAGATGAAAGCCAGATCCAGCTGGCAGG...CAGTGTTAGTCCCACCTCACAGGGAGGTGGCCTGAGATGGCAAGCTGGTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR CCA 90 bp | CTCTTAGCCCTCATGTGGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGCCTGCCAGCTGGATCTaGCTTTCATCTGTTTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLALMWTSPLAILEENPGPASWI*LSSVSF Trigger: GAACGAAACAGATGAAAGCCAGATCCAGCTGGCAGG...CCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAGGGCTAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000217015.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAGGTGGGACTAACACTGTCTTCACCACCAGGTCTCACTCAGTGTAGCATGCTGCCTTCCTCTGTGTaGACTGTGCATCTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CEVGLTLSSPPGLTQCSMLPSSV*TVHLAP Trigger: TGGAGCGAGATGCACAGTTCACACAGAGGAAGGCAG...CATGCTACACTGAGTGAGACCTGGTGGTGAAGACAGTGTTAGTCCCACCTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATATGGACGGTATTTGTCTCTaGAGTGACTTCGCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSGHPRGESRGKWSHDMDGICL*SDFAVW Trigger: CCACACTGCGAAGTCACTTCAGAGACAAATACCGTC...CATATCATGTGACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217015.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGAGGTGGGACTAACACTGTCTTCACCACCAGGTCTCACTCAGTGTAGCCCTCTGTGTGAACTGTaGATCTCGCTCCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCEVGLTLSSPPGLTQCSPLCEL*ISLHLL Trigger: GAGAAGATGGAGCGAGATGCACAGTTCACACAGAGG...GCTACACTGAGTGAGACCTGGTGGTGAAGACAGTGTTAGTCCCACCTCACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
||
| CDS-3UTR CCA 90 bp | CACATGATATGGCACTTCTCAGCTGATTGCTTGAGGTCCCCTAGTGTAGTCTGGAGTGACTTCGCAGTGTaGCCCGCTCTGCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMIWHFSADCLRSPSVVWSDFAV*PALPSS Trigger: AGAGGAAGGCAGAGCGGGCCACACTGCGAAGTCACT...CCAGACTACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217015.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGATTGCTTGAGGTCCCCTAGTGTAGTCTGGGCTTTGTCCTTGAGTGAGTATTTGTCTCTGAAGTaGCTTCGCAGTGTGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SADCLRSPSVVWALSLSEYLSLK*LRSVAR Trigger: GCGGGCCACACTGCGAAGTCACTTCAGAGACAAATA...CTCACTCAAGGACAAAGCCCAGACTACACTAGGGGACCTCAAGCAATCAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217015.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGGGGAAGTGGTCACATGATATGGCACTTCTCAGCTGATTGCTTGAGGTCCCCTGCCAGCTGGATCTaGCTTTCATCTGTTTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGSGHMIWHFSADCLRSPASWI*LSSVSF Trigger: AAACGAAACAGATGAAAGCCAGATCCAGCTGGCAGG...GGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTGACCACTTCCCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGACACAGATTCAATTCTCAGCACCCACATGACAACTCAAAACCATCTGCTCCACATCTCCGCCTaGCAGCTGGATCTGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: FPDTDSILSTHMTTQNHLLHISA*QLDLAF Trigger: GAAAGCCAGATCCAGCTGGCAGGCGGAGATGTGGAG...CAGATGGTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS-3UTR GCA 90 bp | AGTGCTTTTCCAGACACAGATTCAATTCTCAGCACCCACATGACAACTCAAAACCACTTCTCAGCTGATTaGTTGAGGTCCCCTAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SAFPDTDSILSTHMTTQNHFSAD*LRSPSV Trigger: TACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTG...GTTTTGAGTTGTCATGTGGGTGCTGAGAATTGAATCTGTGTCTGGAAAAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS-3UTR TCA 90 bp | AACGAGAAGAGGAAATTCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAAGACGGTATTTGTCTCTaGAGTGACTTCGCAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NEKRKFQLWNPENSTGTEDGICL*SDFAVW Trigger: CCACACTGCGAAGTCACTTCAGAGACAAATACCGTC...TTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGAATTTCCTCTTCTCGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS-3UTR CAA 90 bp | CAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATATGGCTTCGGCTGCAGACTaGTCTCCGTCCCCCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: QPSGHPRGESRGKWSHDMASAAD*SPSPLS Trigger: GGACAAGGGGGACGGAGACAAGTCTGCAGCCGAAGC...CATATCATGTGACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
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| CDS-3UTR CAA 90 bp | TTAGCCCTCATGTGGACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAGTCTGGGCTTTGTCCTaGAGTGAGCTGAGGTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: LALMWTSPLAILEENPGGVWALS*SELRSR Trigger: CCTAGACCTCAGCTCACTCAAGGACAAAGCCCAGAC...TCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGTCCACATGAGGGCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS CCA 90 bp | GCTAGCTCCCGAGGCAGCTCCACATCTCCGCCTGCCAGCTGGATCTaGCTTTCATCTGTTTCGTTCTTGGGCAGACGGTATTTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ASSRGSSTSPPASWI*LSSVSFLGRRYLSL Trigger: CAGAGACAAATACCGTCTGCCCAAGAACGAAACAGATGAAAGCCAGATCCAGCTGGCAGGCGGAGATGTGGAGCTGCCTCGGGAGCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS CCA 90 bp | ATCTTGGCTAGCTCCCGAGGCAGCTCCACATCTCCGCCTGCCAGCTaGATCTGGCTTTCATCTGTTTCGTTCTTGGGCAGACGGTATTTG | + |
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Preference number: 5 (lower is better) Translates to: ILASSRGSSTSPPAS*IWLSSVSFLGRRYL Trigger: CAAATACCGTCTGCCCAAGAACGAAACAGATGAAAGCCAGATCCAGCTGGCAGGCGGAGATGTGGAGCTGCCTCGGGAGCTAGCCAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS TCA 90 bp | GTGAACTGTGCATCTCGCTCCATCTTCTCCTCCACCAGTTGCTTCTaGTACTCCTCGTACTCTTCTCGGCTCATGCCCTGTGCTTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: VNCASRSIFSSTSCF*YSSYSSRLMPCASA Trigger: AGCCGAAGCACAGGGCATGAGCCGAGAAGAGTACGAGGAGTATCAGAAGCAACTGGTGGAGGAGAAGATGGAGCGAGATGCACAGTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS GCA 90 bp | CAGACGGTATTTGTCTCTGAAGTGACTTCGCAGTGTGGCCCGCTCTaGCTTCCTCTGTGTGAACTGTGCATCTCGCTCCATCTTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QTVFVSEVTSQCGPL*LPLCELCISLHLLL Trigger: GAGGAGAAGATGGAGCGAGATGCACAGTTCACACAGAGGAAGGCAGAGCGGGCCACACTGCGAAGTCACTTCAGAGACAAATACCGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS-3UTR CAA 90 bp | ACCAGCCCTCTGGCCATCCTAGAGGAGAATCCAGGGGGAAGTGGTCACATGATATGTGAGGTTCTTCAGTaGGCCACCCACCATGGACTT | + |
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Preference number: 5 (lower is better) Translates to: TSPLAILEENPGGSGHMICEVLQ*ATHHGL Trigger: AAGTCCATGGTGGGTGGCCAACTGAAGAACCTCACA...TATCATGTGACCACTTCCCCCTGGATTCTCCTCTAGGATGGCCAGAGGGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
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| CDS-3UTR CAA 90 bp | CGGAGGGAGAGAGGGAAGAATGGGAACTTTGCTGACAATAAAGAGAGAGAGAGAGCTTCGGCTGCAGACTaGTCTCCGTCCCCCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RRERGKNGNFADNKERERASAAD*SPSPLS Trigger: GGACAAGGGGGACGGAGACAAGTCTGCAGCCGAAGC...TCTCTCTCTCTCTTTATTGTCAGCAAAGTTCCCATTCTTCCCTCTCTCCCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS TCA 90 bp | CTTTCATCTGTTTCGTTCTTGGGCAGACGGTATTTGTCTCTGAAGTaGCTTCGCAGTGTGGCCCGCTCTGCCTTCCTCTGTGTGAACTGT | + |
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Preference number: 5 (lower is better) Translates to: LSSVSFLGRRYLSLK*LRSVARSAFLCVNC Trigger: ACAGTTCACACAGAGGAAGGCAGAGCGGGCCACACTGCGAAGTCACTTCAGAGACAAATACCGTCTGCCCAAGAACGAAACAGATGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000217015.2 |
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| CDS TCA 90 bp | GATCTGGCTTTCATCTGTTTCGTTTTCTCCTCCACCAGTTGCTTCTaGTACTCCTCGTACTCTTCTCGGCTCATGCCCTGTGCTTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: DLAFICFVFSSTSCF*YSSYSSRLMPCASA Trigger: AGCCGAAGCACAGGGCATGAGCCGAGAAGAGTACGAGGAGTATCAGAAGCAACTGGTGGAGGAGAAAACGAAACAGATGAAAGCCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
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| CDS-3UTR CAA 90 bp | TCCAACTATGGAATCCAGAGAATTCTACAGGAACAGAACACAGTTTGGCTCAGCTGTGAGGTTCTTCAGTaGGCCACCCACCATGGACTT | + |
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Preference number: 5 (lower is better) Translates to: SNYGIQRILQEQNTVWLSCEVLQ*ATHHGL Trigger: AAGTCCATGGTGGGTGGCCAACTGAAGAACCTCACA...GCTGAGCCAAACTGTGTTCTGTTCCTGTAGAATTCTCTGGATTCCATAGTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS GCA 72 bp | CTCGTACTCTTCTCGGCTCATGCCCTGTGCTTCGGCTaGAGACTTGTCTCCGTCCCCCTTGTCCTCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LVLFSAHALCFG*RLVSVPLVLAA Trigger: GGCGGCGAGGACAAGGGGGACGGAGACAAGTCTGCAGCCGAAGCACAGGGCATGAGCCGAGAAGAGTACGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000215487.2 |
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| CDS GCA 72 bp | CTGATACTCCTCGTACTCTTCTCGGCTCATGCCCTGTaGTTCGGCTGCAGACTTGTCTCCGTCCCCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LILLVLFSAHAL*FGCRLVSVPLV Trigger: GACAAGGGGGACGGAGACAAGTCTGCAGCCGAAGCACAGGGCATGAGCCGAGAAGAGTACGAGGAGTATCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000215487.2 |
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| CDS CCA 72 bp | AGCTCCCGAGGCAGCTCCACATCTCCGCCTGCCAGCTaGATCTGGCTTTCATCTGTTTCGTTCTTGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SSRGSSTSPPAS*IWLSSVSFLGR Trigger: TCTGCCCAAGAACGAAACAGATGAAAGCCAGATCCAGCTGGCAGGCGGAGATGTGGAGCTGCCTCGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000217015.2 |
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| CDS CCA 72 bp | TATCCTCCTCTTCCTCCGTATCCTCCTCGATCATCTTaGCTAGCTCCCGAGGCAGCTCCACATCTCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: YPPLPPYPPRSS*LAPEAAPHLRL Trigger: CAGGCGGAGATGTGGAGCTGCCTCGGGAGCTAGCCAAGATGATCGAGGAGGATACGGAGGAAGAGGAGGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS CCA 72 bp | CGAGGCAGCTCCACATCTCCGCCTGCCAGCTGGATCTaGCTTTCATCTGTTTCGTTCTTGGGCAGACGGTAT | + |
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Preference number: 6 (lower is better) Translates to: RGSSTSPPASWI*LSSVSFLGRRY Trigger: ATACCGTCTGCCCAAGAACGAAACAGATGAAAGCCAGATCCAGCTGGCAGGCGGAGATGTGGAGCTGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000217015.2 |
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| CDS TCA 72 bp | GCATCTCGCTCCATCTTCTCCTCCACCAGTTGCTTCTaGTACTCCTCGTACTCTTCTCGGCTCATGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ASRSIFSSTSCF*YSSYSSRLMPC Trigger: ACAGGGCATGAGCCGAGAAGAGTACGAGGAGTATCAGAAGCAACTGGTGGAGGAGAAGATGGAGCGAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS TCA 72 bp | GTTTCGTTCTTGGGCAGACGGTATTTGTCTCTGAAGTaGCTTCGCAGTGTGGCCCGCTCTGCCTTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VSFLGRRYLSLK*LRSVARSAFLC Trigger: ACAGAGGAAGGCAGAGCGGGCCACACTGCGAAGTCACTTCAGAGACAAATACCGTCTGCCCAAGAACGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000217015.2 |
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| CDS TCA 72 bp | CATCTGTTTCGTTCTTGGGCAGACGGTATTTGTCTCTaGAGTGACTTCGCAGTGTGGCCCGCTCTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HLFRSWADGICL*SDFAVWPALPS Trigger: GGAAGGCAGAGCGGGCCACACTGCGAAGTCACTTCAGAGACAAATACCGTCTGCCCAAGAACGAAACAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045068.10 ENSMUST00000217015.2 |
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| CDS GCA 72 bp | TTTGTCTCTGAAGTGACTTCGCAGTGTGGCCCGCTCTaGCTTCCTCTGTGTGAACTGTGCATCTCGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FVSEVTSQCGPL*LPLCELCISLH Trigger: ATGGAGCGAGATGCACAGTTCACACAGAGGAAGGCAGAGCGGGCCACACTGCGAAGTCACTTCAGAGACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045068.10 |
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| CDS TCA 72 bp | TTCATCTGTTTCGTTTTCTCCTCCACCAGTTGCTTCTaGTACTCCTCGTACTCTTCTCGGCTCATGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FICFVFSSTSCF*YSSYSSRLMPC Trigger: ACAGGGCATGAGCCGAGAAGAGTACGAGGAGTATCAGAAGCAACTGGTGGAGGAGAAAACGAAACAGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215487.2 |
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