Pregenerated sensors for CPLX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025867Ensembl transcript IDs: ENSMUST00000026985.9
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGAAGGAGTGGCTTGGCCGGGGCCGTGCTTCTTTAGGTCGGGTTaGGGAGAGGTGTGCTCCTGGCCAGCAGCGGCACCAGGAAGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LEGVAWPGPCFFRSG*GEVCSWPAAAPGRG Trigger: TCCTCTTCCTGGTGCCGCTGCTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGGCCCCGGCCAAGCCACTCCTTCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | TGGAGCCAGACCACTCAGTGCCTCTGCCCTGACCTGGACTCCCACTaGGGGGTTCAGAGGCCAAAGGTCAGCATGCTGGGCAAGGCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: WSQTTQCLCPDLDSH*GVQRPKVSMLGKAG Trigger: TCCAGCCTTGCCCAGCATGCTGACCTTTGGCCTCTGAACCCCCCAGTGGGAGTCCAGGTCAGGGCAGAGGCACTGAGTGGTCTGGCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | GTGGGAAAGAGGTTCCCCTACATGAGCAGGATGGTCCATCTCACCTaGGTCTCAGTGGGACTTCCCACTCCCATCCCGGGGCCAGCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: VGKRFPYMSRMVHLT*VSVGLPTPIPGPAG Trigger: TCCTGCTGGCCCCGGGATGGGAGTGGGAAGTCCCACTGAGACCCAGGTGAGATGGACCATCCTGCTCATGTAGGGGAACCTCTTTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | AGTCCAAAGAGGATCCATTTGGAAGGAGTGGCTTGGCCGGGGCCGTaGTTCTTTAGGTCGGGTTGGGGAGAGGTGTGCTCCTGGCCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: SPKRIHLEGVAWPGP*FFRSGWGEVCSWPA Trigger: TGCTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGGCCCCGGCCAAGCCACTCCTTCCAAATGGATCCTCTTTGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 90 bp | GCATGGCTTCCTAGGGTACTGCCTGGGTCTGTCCCAGTAGCATTCTaGGGACCTCAGGTAGGAAACCCCCAAGGGTGGGAGGACTCTAGG | + |
|
Preference number: 1 (lower is better) Translates to: AWLPRVLPGSVPVAF*GPQVGNPQGWEDSR Trigger: CCTAGAGTCCTCCCACCCTTGGGGGTTTCCTACCTGAGGTCCTCAGAATGCTACTGGGACAGACCCAGGCAGTACCCTAGGAAGCCATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 90 bp | CGCTCTGGGCTCAGAGGAGCCATGGAAACCACCAAGGACTTCAGTTaGAGGGTCTGGGCTCTCTCAGGACCATTCGGGTTCTTGCGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: RSGLRGAMETTKDFS*RVWALSGPFGFLRG Trigger: GCCACGCAAGAACCCGAATGGTCCTGAGAGAGCCCAGACCCTTCAACTGAAGTCCTTGGTGGTTTCCATGGCTCCTCTGAGCCCAGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | CTCCACAGATGTGCTAAAGTCCAAAGAGGATCCATTTGGAAGGAGTaGCTTGGCCGGGGCCGTGCTTCTTTAGGTCGGGTTGGGGAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: LHRCAKVQRGSIWKE*LGRGRASLGRVGER Trigger: CCTCTCCCCAACCCGACCTAAAGAAGCACGGCCCCGGCCAAGCCACTCCTTCCAAATGGATCCTCTTTGGACTTTAGCACATCTGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | GGGCTCTCTCAGGACCATTCGGGTTCTTGCGTGGCTGGGTTTCCTTaGCTATTTGCATCTCTCCAGGTCTTGGTCTCCACTACCCATCTG | + |
|
Preference number: 1 (lower is better) Translates to: GLSQDHSGSCVAGFP*LFASLQVLVSTTHL Trigger: CAGATGGGTAGTGGAGACCAAGACCTGGAGAGATGCAAATAGGCAAGGAAACCCAGCCACGCAAGAACCCGAATGGTCCTGAGAGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | CCTGGGTTCCTCCACAGATGTGCTAAAGTCCAAAGAGGATCCATTTaGAAGGAGTGGCTTGGCCGGGGCCGTGCTTCTTTAGGTCGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: PGFLHRCAKVQRGSI*KEWLGRGRASLGRV Trigger: AACCCGACCTAAAGAAGCACGGCCCCGGCCAAGCCACTCCTTCCAAATGGATCCTCTTTGGACTTTAGCACATCTGTGGAGGAACCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 90 bp | AGCAACAAGGACACAGCACAGTTGTGGGAAAGAGGTTCCCCTACATaGGCAGGATGGTCCATCTCACCTGGGTCTCAGTGGGACTTCCCA | + |
|
Preference number: 1 (lower is better) Translates to: SNKDTAQLWERGSPT*AGWSISPGSQWDFP Trigger: TGGGAAGTCCCACTGAGACCCAGGTGAGATGGACCATCCTGCTCATGTAGGGGAACCTCTTTCCCACAACTGTGCTGTGTCCTTGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | GAGCCTGATGACCTTCCCAAAGAGCACACATGCCTGTCAGTGATGTaGCTCATCCCACTCCAGCCATCTTCCATGCTGTGTGTGTGCATG | + |
|
Preference number: 1 (lower is better) Translates to: EPDDLPKEHTCLSVM*LIPLQPSSMLCVCM Trigger: CATGCACACACACAGCATGGAAGATGGCTGGAGTGGGATGAGGCACATCACTGACAGGCATGTGTGCTCTTTGGGAAGGTCATCAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 90 bp | TGTAGGAGCCTGATGACCTTCCCAAAGAGCACACATGCCTGTCAGTaGTGTGCCTCATCCCACTCCAGCCATCTTCCATGCTGTGTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: CRSLMTFPKSTHACQ*CASSHSSHLPCCVC Trigger: ACACACACAGCATGGAAGATGGCTGGAGTGGGATGAGGCACATCACTGACAGGCATGTGTGCTCTTTGGGAAGGTCATCAGGCTCCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | ACTTCAGTTGAAGGGTCTGGGCTCTCTCAGGACCATTCGGGTTCTTaGGTGGCTGGGTTTCCTTGCCTATTTGCATCTCTCCAGGTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: TSVEGSGLSQDHSGS*VAGFPCLFASLQVL Trigger: CAAGACCTGGAGAGATGCAAATAGGCAAGGAAACCCAGCCACGCAAGAACCCGAATGGTCCTGAGAGAGCCCAGACCCTTCAACTGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | CCTATACATCCCAGAGGAGAGCTGACCCTTGGCCAGTGGGATGAATaGACAGTCTTTTGTCAGGTGGCAATTGGCTTCTCCCCAGCTGTT | + |
|
Preference number: 1 (lower is better) Translates to: PIHPRGELTLGQWDE*TVFCQVAIGFSPAV Trigger: AACAGCTGGGGAGAAGCCAATTGCCACCTGACAAAAGACTGTCCATTCATCCCACTGGCCAAGGGTCAGCTCTCCTCTGGGATGTATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | AAGGGTGGGAGGACTCTAGGCCAAAGTAAGGTTTCCTGTCAGATGTaGCCATCTGTGACTAACCGTCTCAGGGTGGGGAGGAAGCATCTT | + |
|
Preference number: 1 (lower is better) Translates to: KGGRTLGQSKVSCQM*PSVTNRLRVGRKHL Trigger: AAGATGCTTCCTCCCCACCCTGAGACGGTTAGTCACAGATGGCCACATCTGACAGGAAACCTTACTTTGGCCTAGAGTCCTCCCACCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 90 bp | TCCTCCTCCTCCTCCTCCTCCTTCCTTTTTCAAGCTACTTGGGAGTaGAACAGGACTAGAAACCCTGGGATGAAGGGTCTGTCAGGGACT | + |
|
Preference number: 1 (lower is better) Translates to: SSSSSSSFLFQATWE*NRTRNPGMKGLSGT Trigger: AGTCCCTGACAGACCCTTCATCCCAGGGTTTCTAGTCCTGTTTCACTCCCAAGTAGCTTGAAAAAGGAAGGAGGAGGAGGAGGAGGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | GTCCCAGGACCTAAGTCAGATGAGAGAGAAATAAGGGTGTTGCCCTaGCCTGGGTTCCTCCACAGATGTGCTAAAGTCCAAAGAGGATCC | + |
|
Preference number: 1 (lower is better) Translates to: VPGPKSDEREIRVLP*PGFLHRCAKVQRGS Trigger: GGATCCTCTTTGGACTTTAGCACATCTGTGGAGGAACCCAGGGCAGGGCAACACCCTTATTTCTCTCTCATCTGACTTAGGTCCTGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | CATACCAGTCCTATACATCCCAGAGGAGAGCTGACCCTTGGCCAGTaGGATGAATGGACAGTCTTTTGTCAGGTGGCAATTGGCTTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: HTSPIHPRGELTLGQ*DEWTVFCQVAIGFS Trigger: GGAGAAGCCAATTGCCACCTGACAAAAGACTGTCCATTCATCCCACTGGCCAAGGGTCAGCTCTCCTCTGGGATGTATAGGACTGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | CTCTCCATTTCTCCACAAGTCACAGAGCAGGAAGCCTTGACAAGGTaGTACGTGAGGACACATACCAGTCCTATACATCCCAGAGGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: LSISPQVTEQEALTR*YVRTHTSPIHPRGE Trigger: CTCTCCTCTGGGATGTATAGGACTGGTATGTGTCCTCACGTACCACCTTGTCAAGGCTTCCTGCTCTGTGACTTGTGGAGAAATGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | GAAAATGAACTGGGACTCAGGCACACTACATCCCACAAACACATATaGACGAGGCACATCAGATACACAGCCTGCAACACAGAGCTAACA | + |
|
Preference number: 1 (lower is better) Translates to: ENELGLRHTTSHKHI*TRHIRYTACNTELT Trigger: TGTTAGCTCTGTGTTGCAGGCTGTGTATCTGATGTGCCTCGTGCATATGTGTTTGTGGGATGTAGTGTGCCTGAGTCCCAGTTCATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | TATGTATCCTTTCCAATGCTCAAGTACCCAAGTTCTGCCCTCCCATaGATGTGTGGTACACAGCATCCTTCCAGGGTTGCCTGTTGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: YVSFPMLKYPSSALP*MCGTQHPSRVACCF Trigger: AAAACAACAGGCAACCCTGGAAGGATGCTGTGTACCACACATGCATGGGAGGGCAGAACTTGGGTACTTGAGCATTGGAAAGGATACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | GTGATGTGCCTCATCCCACTCCAGCCATCTTCCATGCTGTGTGTGTaGATGTGTGTATGTATGTGTGTGTATGTGTACATATGTGTGTAT | + |
|
Preference number: 1 (lower is better) Translates to: VMCLIPLQPSSMLCV*MCVCMCVYVYICVY Trigger: ATACACACATATGTACACATACACACACATACATACACACATGCACACACACAGCATGGAAGATGGCTGGAGTGGGATGAGGCACATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 90 bp | CCAAGGCCCTGCTCCTTAGAGGAGGGAGAGACCAGGGGACTTTTCTaGTTCCCTACACATATGGATTGTTTAGTCTTATCTTTAAAGTAT | + |
|
Preference number: 1 (lower is better) Translates to: PRPCSLEEGETRGLF*FPTHMDCLVLSLKY Trigger: ATACTTTAAAGATAAGACTAAACAATCCATATGTGTAGGGAACCAGAAAAGTCCCCTGGTCTCTCCCTCCTCTAAGGAGCAGGGCCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 90 bp | TGCCGTTTTGCAAGTACATGCATATACAAGCTAGCACATGCAATCTaGAAGCACACGAGATGGCTAGCACATACCGAGAAAATGAACTGG | + |
|
Preference number: 1 (lower is better) Translates to: CRFASTCIYKLAHAI*KHTRWLAHTEKMNW Trigger: CCAGTTCATTTTCTCGGTATGTGCTAGCCATCTCGTGTGCTTTCAGATTGCATGTGCTAGCTTGTATATGCATGTACTTGCAAAACGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 90 bp | CAAGTAGAAATTCTCTTACCTCCACCTTCAAAGGACCTCAGAATCTaGTGTCTGGGCATAGAAAGGAGACATAAATCTAGACTAAGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: QVEILLPPPSKDLRI*CLGIERRHKSRLSQ Trigger: CTGGCTTAGTCTAGATTTATGTCTCCTTTCTATGCCCAGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAAGAGAATTTCTACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 90 bp | ACATATGGATTGTTTAGTCTTATCTTTAAAGTATTGCGGTCTAACTaGTATGGCTTTAACTATTGGAAACGGACAGGGAAGACGTCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: TYGLFSLIFKVLRSN*YGFNYWKRTGKTSV Trigger: GACAGACGTCTTCCCTGTCCGTTTCCAATAGTTAAAGCCATATCAGTTAGACCGCAATACTTTAAAGATAAGACTAAACAATCCATATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTGAAAGGGCAGGGCGTCCCTGCCTGTCTCTaGCCCAGGACCCCAAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SRGQQEHLRSLSLVKGQGVPACL*PRTPRL Trigger: GAGCCTTGGGGTCCTGGGCCAGAGACAGGCAGGGAC...GCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCCGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCCGGGGCCGTGCTTCTTTAGGTCGGGTTGGGGAGAGGTGTGCTCCTGGCCAGGGGTCTGTCAGGGACTaGAGAGGGGAGGAGTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GRGRASLGRVGERCAPGQGSVRD*RGEESL Trigger: CAGGGACTCCTCCCCTCTGCAGTCCCTGACAGACCC...CTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGGCCCCGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTGAAAGGGCAGGGCGGTGTTGCCCTGCCCTaGGTTCCTCCACAGATGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SRGQQEHLRSLSLVKGQGGVALP*VPPQMC Trigger: GCACATCTGTGGAGGAACCCAGGGCAGGGCAACACC...GCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTAGGTCGGGTTGGGGAGAGGTGTGCTCCTGGCCAGCAGCGGCACCAGGAATCAGTGCCTCTGCCCTaGCCTGGACTCCCACTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SLGRVGERCAPGQQRHQESVPLP*PGLPLG Trigger: CCCCAGTGGGAGTCCAGGTCAGGGCAGAGGCACTGA...TTCCTGGTGCCGCTGCTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCGGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTGAAAGGGCAGGGCAGGACAGGCTCCCTCTaGATAGCCTTCCTGGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SRGQQEHLRSLSLVKGQGRTGSL*IAFLEP Trigger: TGGCTCCAGGAAGGCTATTCAGAGGGAGCCTGTCCT...GCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTGAAAGGGCAGGGCTTCTTTAGGTCGGGTTaGGGAGAGGTGTGCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SRGQQEHLRSLSLVKGQGFFRSG*GEVCSW Trigger: CCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAA...GCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCCGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTGAAAGGGCAGGGCTGGAAGGAAGCGCTGTaGAGCTTTGCTGCTAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SRGQQEHLRSLSLVKGQGWKEAL*SFAAKG Trigger: GCCCTTAGCAGCAAAGCTCCACAGCGCTTCCTTCCA...GCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCCGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | GGCCGGGGCCGTGCTTCTTTAGGTCGGGTTGGGGAGAGGTGTGCTCCTGGCCAGCAAGCTACTTGGGAGTaGAACAGGACTAGAAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: GRGRASLGRVGERCAPGQQATWE*NRTRNP Trigger: AGGGTTTCTAGTCCTGTTTCACTCCCAAGTAGCTTG...CTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGGCCCCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGGGCAAACTCGGGCCTAGCCTGGCAGTGGGGTCCCAGGACCTAAGTCAGCAATGCCTTTGGCTCTaGGTTCAATGCCCCCTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: WLGKLGPSLAVGSQDLSQQCLWL*VQCPLL Trigger: TAGCAGGGGGCATTGAACCCAGAGCCAAAGGCATTG...CTGACTTAGGTCCTGGGACCCCACTGCCAGGCTAGGCCCGAGTTTGCCCAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 90 bp | AGTGAGGTCAGGGGCTGGCCAAACCACAGGAAGATGGAAGGGGAGTaGTGGGTGGGCAACTCTGCTCACTTCATAGTGGGCACTCTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: SEVRGWPNHRKMEGE*WVGNSAHFIVGTLG Trigger: CCCGAGAGTGCCCACTATGAAGTGAGCAGAGTTGCCCACCCACAACTCCCCTTCCATCTTCCTGTGGTTTGGCCAGCCCCTGACCTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCACAGGCCACCACTGCCCGATGGCTCCAAGTATTTTCTGGGGGTCTGGGCCAAAGGTCAGCATGCTaGGCAAGGCTGGAATGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: MAQATTARWLQVFSGGLGQRSAC*ARLECV Trigger: GACACATTCCAGCCTTGCCCAGCATGCTGACCTTTG...GCCCAGACCCCCAGAAAATACTTGGAGCCATCGGGCAGTGGTGGCCTGTGCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAAACCACCAAGGACTTCAGTTGAAGGGTCTGGGCTCTCTCAGGACCATTCGGCTAGAAACCCTGGGATaGAGGGTCTGTCAGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: GNHQGLQLKGLGSLRTIRLETLG*RVCQGL Trigger: CAGTCCCTGACAGACCCTTCATCCCAGGGTTTCTAG...CCGAATGGTCCTGAGAGAGCCCAGACCCTTCAACTGAAGTCCTTGGTGGTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTGAAAAGCCCTGAGCTCGCTCTGGGCTCAGAGGAGCCATGGAAACCACCACCTTGGCCAGTGGGATaGATGGACAGTCTTTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RLKSPELALGSEEPWKPPPWPVG*MDSLLS Trigger: TGACAAAAGACTGTCCATTCATCCCACTGGCCAAGG...TGGTGGTTTCCATGGCTCCTCTGAGCCCAGAGCGAGCTCAGGGCTTTTCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGAGCAGGATGGTCCATCTCACCTGGGTCTCAGTGGGACTTCCCACTCCCATTTCTCCCCAGCTGTTTaGGGGCTTTGGCCAAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HEQDGPSHLGLSGTSHSHFSPAV*GLWPRR Trigger: TCTTCTTGGCCAAAGCCCCCAAACAGCTGGGGAGAA...ATGGGAGTGGGAAGTCCCACTGAGACCCAGGTGAGATGGACCATCCTGCTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTGAAAGGGCAGGGCGTAAGTCCACTAAAATaGAAAACCTGCAGAATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SRGQQEHLRSLSLVKGQGVSPLK*KTCRMQ Trigger: TTGCATTCTGCAGGTTTTCCATTTTAGTGGACTTAC...GCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 90 bp | TGGGCTCTCTCAGGACCATTCGGGTTCTTGCGTGGCTGGGTTTCCTaGCCTATTTGCATCTCTCCAGGTCTTGGTCTCCACTACCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: WALSGPFGFLRGWVS*PICISPGLGLHYPS Trigger: AGATGGGTAGTGGAGACCAAGACCTGGAGAGATGCAAATAGGCAAGGAAACCCAGCCACGCAAGAACCCGAATGGTCCTGAGAGAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | CATGAGCAGGATGGTCCATCTCACCTGGGTCTCAGTGGGACTTCCCACTCCCATCACATACCGAGAAAATaGACTGGGACTCAGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: HEQDGPSHLGLSGTSHSHHIPRK*TGTQAH Trigger: GTGTGCCTGAGTCCCAGTTCATTTTCTCGGTATGTG...ATGGGAGTGGGAAGTCCCACTGAGACCCAGGTGAGATGGACCATCCTGCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGATATCCTGTGTCATCTTCACAGAGGCCCAGAGAAGCGCTCTTTCTTTTCAGGACCCCAAGGCTCTaGAGAATGACCATCCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PGYPVSSSQRPREALFLFRTPRL*RMTILP Trigger: GGGCAGGATGGTCATTCTTCAGAGCCTTGGGGTCCT...GAAAAGAAAGAGCGCTTCTCTGGGCCTCTGTGAAGATGACACAGGATATCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGTGGGATGAATGGACAGTCTTTTGTCAGGTGGCAATTGGCTTCTCCCCAGCAAGAAGAGTCCTCCTaGGGACAATGGGGACTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ASGMNGQSFVRWQLASPQQEESS*GQWGLG Trigger: TCCAAGTCCCCATTGTCCCCAGGAGGACTCTTCTTG...CTGGGGAGAAGCCAATTGCCACCTGACAAAAGACTGTCCATTCATCCCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTCCACCTTCAAAGGACCTCAGAATCTGCTGTCTGGGCATAGAAAGGAGACTGCAGAATGCAAACTaGGGCCAGTGGGACAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LPPPSKDLRICCLGIERRLQNAN*GQWDRG Trigger: GCCCCTGTCCCACTGGCCCCAGTTTGCATTCTGCAG...TCTCCTTTCTATGCCCAGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGATATCCTGTGTCATCTTCACAGAGGCCCAGAGAAGCGCTCTTTCTTTTCAACACTAGCCCCCTGTaGGATGACACAGGGGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PGYPVSSSQRPREALFLFNTSPL*DDTGAQ Trigger: TTGGGCCCCTGTGTCATCCCACAGGGGGCTAGTGTT...GAAAAGAAAGAGCGCTTCTCTGGGCCTCTGTGAAGATGACACAGGATATCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 90 bp | CCCCTCTGTCTCTCCATTTCTCCACAAGTCACAGAGCAGGAAGCCTaGACAAGGTGGTACGTGAGGACACATACCAGTCCTATACATCCC | + |
|
Preference number: 2 (lower is better) Translates to: PLCLSISPQVTEQEA*TRWYVRTHTSPIHP Trigger: GGGATGTATAGGACTGGTATGTGTCCTCACGTACCACCTTGTCAAGGCTTCCTGCTCTGTGACTTGTGGAGAAATGGAGAGACAGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGACTGACACATTTAAAGGAAGCAGAGCAACAAGGACACAGCACAGTTGTGACCACTCAGTGCCTCTaGCCTGACCTGGACTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QRLTHLKEAEQQGHSTVVTTQCL*PDLDSH Trigger: GTGGGAGTCCAGGTCAGGGCAGAGGCACTGAGTGGT...CACAACTGTGCTGTGTCCTTGTTGCTCTGCTTCCTTTAAATGTGTCAGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGATATCCTGTGTCATCTTCACAGAGGCCCAGAGAAGCGCTCTTTCTTTTCATTACTTTGGCTGGCTaGGGACAGTGGTCCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PGYPVSSSQRPREALFLFITLAG*GQWSSW Trigger: CCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAAT...GAAAAGAAAGAGCGCTTCTCTGGGCCTCTGTGAAGATGACACAGGATATCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCAGAGCAACAAGGACACAGCACAGTTGTGGGAAAGAGGTTCCCCTACATGTTAGACCCACACACATaGACACCAGTCTTAGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: EAEQQGHSTVVGKRFPYMLDPHT*TPVLAH Trigger: GTGGGCTAAGACTGGTGTTCATGTGTGTGGGTCTAA...CATGTAGGGGAACCTCTTTCCCACAACTGTGCTGTGTCCTTGTTGCTCTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTCTCATTTACCTACCTGGGATGGCCTATAGAGCTCCTACTTCCATGGAAGATAAGGGTGTTGCCCTaGCCTGGGTTCCTCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LFSFTYLGWPIELLLPWKIRVLP*PGFLHR Trigger: TCTGTGGAGGAACCCAGGGCAGGGCAACACCCTTAT...CTTCCATGGAAGTAGGAGCTCTATAGGCCATCCCAGGTAGGTAAATGAGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAGCTAACACACACACATGCAATCTCAAGACACAGTCGCATCGAGATGTACGCTCATCCCTCATTTaGGCCTCCCCCTCTGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: HRANTHTCNLKTQSHRDVRSSLI*ASPSVS Trigger: AGAGACAGAGGGGGAGGCGCAAATGAGGGATGAGCG...TACATCTCGATGCGACTGTGTCTTGAGATTGCATGTGTGTGTGTTAGCTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGATATCCTGTGTCATCTTCACAGAGGCCCAGAGAAGCGCTCTTTCTTTTCGGGTTCTTGCGTGGCTaGGTTTCCTTGCCTATTTGC | + |
|
Preference number: 2 (lower is better) Translates to: PGYPVSSSQRPREALFLFGFLRG*VSLPIC Trigger: GCAAATAGGCAAGGAAACCCAGCCACGCAAGAACCC...GAAAAGAAAGAGCGCTTCTCTGGGCCTCTGTGAAGATGACACAGGATATCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 90 bp | TCTTGCGTGGCTGGGTTTCCTTGCCTATTTGCATCTCTCCAGGTCTaGGTCTCCACTACCCATCTGATGCTTTGTACTGTGCCGTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: SCVAGFPCLFASLQV*VSTTHLMLCTVPFI Trigger: AATGAACGGCACAGTACAAAGCATCAGATGGGTAGTGGAGACCAAGACCTGGAGAGATGCAAATAGGCAAGGAAACCCAGCCACGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCAGAGCAACAAGGACACAGCACAGTTGTGGGAAAGAGGTTCCCCTACATGTTTAGATGGCTGGTTTaGTCACCAGCTCTGCCATGT | + |
|
Preference number: 2 (lower is better) Translates to: EAEQQGHSTVVGKRFPYMFRWLV*SPALPC Trigger: ACATGGCAGAGCTGGTGAGCAAACCAGCCATCTAAA...CATGTAGGGGAACCTCTTTCCCACAACTGTGCTGTGTCCTTGTTGCTCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTCCACCTTCAAAGGACCTCAGAATCTGCTGTCTGGGCATAGAAAGGAGATGTCATTACTTTGGCTaGCTGGGGACAGTGGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LPPPSKDLRICCLGIERRCHYFG*LGTVVL Trigger: GAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACA...TCTCCTTTCTATGCCCAGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAGCTAACACACACACATGCAATCTCAAGACACAGTCGCATCGAGATGTACACATGGACAGGACATaGAGGGAAGGAGGGTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: HRANTHTCNLKTQSHRDVHMDRT*REGGWT Trigger: TGTCCACCCTCCTTCCCTCCATGTCCTGTCCATGTG...TACATCTCGATGCGACTGTGTCTTGAGATTGCATGTGTGTGTGTTAGCTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGATATCCTGTGTCATCTTCACAGAGGCCCAGAGAAGCGCTCTTTCTTTTCAATGTGTCATTACTTTaGCTGGCTGGGGACAGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PGYPVSSSQRPREALFLFNVSLL*LAGDSG Trigger: ACCACTGTCCCCAGCCAGCCAAAGTAATGACACATT...GAAAAGAAAGAGCGCTTCTCTGGGCCTCTGTGAAGATGACACAGGATATCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGACTGACACATTTAAAGGAAGCAGAGCAACAAGGACACAGCACAGTTGTGCTAACCGTCTCAGGGTaGGGAGGAAGCATCTTACTC | + |
|
Preference number: 2 (lower is better) Translates to: QRLTHLKEAEQQGHSTVVLTVSG*GGSILL Trigger: GAGTAAGATGCTTCCTCCCCACCCTGAGACGGTTAG...CACAACTGTGCTGTGTCCTTGTTGCTCTGCTTCCTTTAAATGTGTCAGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCAGAGCAACAAGGACACAGCACAGTTGTGGGAAAGAGGTTCCCCTACATGCCAATTCTTGCTCTCTaGGAAAGAAGTTGTACGACT | + |
|
Preference number: 2 (lower is better) Translates to: EAEQQGHSTVVGKRFPYMPILAL*ERSCTT Trigger: AGTCGTACAACTTCTTTCTCAGAGAGCAAGAATTGG...CATGTAGGGGAACCTCTTTCCCACAACTGTGCTGTGTCCTTGTTGCTCTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAGCTAACACACACACATGCAATCTCAAGACACAGTCGCATCGAGATGTAGGCCAGTGGGATGAATaGACAGTCTTTTGTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HRANTHTCNLKTQSHRDVGQWDE*TVFCQV Trigger: CACCTGACAAAAGACTGTCCATTCATCCCACTGGCC...TACATCTCGATGCGACTGTGTCTTGAGATTGCATGTGTGTGTGTTAGCTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTTACCTACCTGGGATGGCCTATAGAGCTCCTACTTCCATGGAAGGAAGCATGCATACGACTTCCTaGTTTAGACCCACACACATG | + |
|
Preference number: 2 (lower is better) Translates to: LIYLPGMAYRAPTSMEGSMHTTS*FRPTHM Trigger: CATGTGTGTGGGTCTAAACCAGGAAGTCGTATGCAT...GCTTCCTTCCATGGAAGTAGGAGCTCTATAGGCCATCCCAGGTAGGTAAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAACCAGGTATGTATCAAGTAGAAATTCTCTTACCTCCACCTTCAAAGGACCTGTCCCAGTAGCATTCTaGGGACCTCAGGTAGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GTRYVSSRNSLTSTFKGPVPVAF*GPQVGN Trigger: GTTTCCTACCTGAGGTCCTCAGAATGCTACTGGGAC...AGGTCCTTTGAAGGTGGAGGTAAGAGAATTTCTACTTGATACATACCTGGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 90 bp | GGGGAGGAAGCATCTTACTCCAATTCTTGCTCTCTGAGAAAGAAGTaGTACGACTTATGCATACGACTTCCTGGTTTAGACCCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: GEEASYSNSCSLRKK*YDLCIRLPGLDPHT Trigger: TGTGTGTGGGTCTAAACCAGGAAGTCGTATGCATAAGTCGTACAACTTCTTTCTCAGAGAGCAAGAATTGGAGTAAGATGCTTCCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAACCAGGTATGTATCAAGTAGAAATTCTCTTACCTCCACCTTCAAAGGACCTTGGAGGGACAACCAATaGCTTTGGCTCTGGGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GTRYVSSRNSLTSTFKGPWRDNQ*LWLWVQ Trigger: TTGAACCCAGAGCCAAAGGCATTGGTTGTCCCTCCA...AGGTCCTTTGAAGGTGGAGGTAAGAGAATTTCTACTTGATACATACCTGGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCAGAGCAACAAGGACACAGCACAGTTGTGGGAAAGAGGTTCCCCTACATGTCTTACTCCAATTCTTaGTCTCTGAGAAAGAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: EAEQQGHSTVVGKRFPYMSYSNS*SLRKKL Trigger: CAACTTCTTTCTCAGAGAGCAAGAATTGGAGTAAGA...CATGTAGGGGAACCTCTTTCCCACAACTGTGCTGTGTCCTTGTTGCTCTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGTAGAAATTCTCTTACCTCCACCTTCAAAGGACCTCAGAATCTGCTGTCTCTAGCACATGCAATCTaGAAGCACACGAGATGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SSRNSLTSTFKGPQNLLSLAHAI*KHTRWL Trigger: TAGCCATCTCGTGTGCTTTCAGATTGCATGTGCTAG...AGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAAGAGAATTTCTACTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 90 bp | TGTCTCAAGCACACATGTCTACAGCTAACATGTAACCTGTCACTCTaGACACACATGCCGTTTTGCAAGTACATGCATATACAAGCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: CLKHTCLQLTCNLSL*THMPFCKYMHIQAS Trigger: GCTAGCTTGTATATGCATGTACTTGCAAAACGGCATGTGTGTCAAGAGTGACAGGTTACATGTTAGCTGTAGACATGTGTGCTTGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | GTGGCTTGGCCGGGGCCGTGCTTCTTTAGGTCGGGTTaGGGAGAGGTGTGCTCCTGGCCAGCAGCGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: VAWPGPCFFRSG*GEVCSWPAAAP Trigger: TGGTGCCGCTGCTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGGCCCCGGCCAAGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCGGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTGAAAGGGCAGGGCGGAAATGGGGGCAGTTaGGATGTGCCAATGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SRGQQEHLRSLSLVKGQGGNGGS*DVPMRS Trigger: GCTCCTCATTGGCACATCCAAACTGCCCCCATTTCC...GCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCCGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | GGGGCCAGCAGGAGCACCTCAGGTCTCTCTCCCTGGTaGAAGGGCAGGGCATTAGGAATGGGGACTAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GASRSTSGLSPW*KGRALGMGTRA Trigger: TGCTCTAGTCCCCATTCCTAATGCCCTGCCCTTTCACCAGGGAGAGAGACCTGAGGTGCTCCTGCTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | AGGATCCATTTGGAAGGAGTGGCTTGGCCGGGGCCGTaGTTCTTTAGGTCGGGTTGGGGAGAGGTGTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RIHLEGVAWPGP*FFRSGWGEVCS Trigger: GGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGGCCCCGGCCAAGCCACTCCTTCCAAATGGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | AGGTTCCCCTACATGAGCAGGATGGTCCATCTCACCTaGGTCTCAGTGGGACTTCCCACTCCCATCCCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RFPYMSRMVHLT*VSVGLPTPIPG Trigger: CCCCGGGATGGGAGTGGGAAGTCCCACTGAGACCCAGGTGAGATGGACCATCCTGCTCATGTAGGGGAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCACCACTGCCCGATGGCTCCAAGTATTTTCTGGGGGTCTGGGCAGCCCCGAATGTGTCATTACTTaGGCTGGCTGGGGACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QATTARWLQVFSGGLGSPECVIT*AGWGQW Trigger: CCACTGTCCCCAGCCAGCCAAAGTAATGACACATTC...GGGGCTGCCCAGACCCCCAGAAAATACTTGGAGCCATCGGGCAGTGGTGGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | GGTGGACAGGAAATGGGGGCAGTTTGGATGTGCCAATaGGGAGCCTCATGGCACAGGCCACCACTGCCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGQEMGAVWMCQ*GASWHRPPLPD Trigger: ATCGGGCAGTGGTGGCCTGTGCCATGAGGCTCCTCATTGGCACATCCAAACTGCCCCCATTTCCTGTCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | CCTAGGGTACTGCCTGGGTCTGTCCCAGTAGCATTCTaGGGACCTCAGGTAGGAAACCCCCAAGGGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRVLPGSVPVAF*GPQVGNPQGWE Trigger: CTCCCACCCTTGGGGGTTTCCTACCTGAGGTCCTCAGAATGCTACTGGGACAGACCCAGGCAGTACCCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | GGGGGCTTTGGCCAAGAAGAGTCCTCCTGGGGACAATaGGGACTTGGAAGCACATGGACAGGACATGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GGFGQEESSWGQ*GLGSTWTGHGG Trigger: CCCTCCATGTCCTGTCCATGTGCTTCCAAGTCCCCATTGTCCCCAGGAGGACTCTTCTTGGCCAAAGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | GATGTAGGATGGGCCTGCCGTGCATTACCCAGTGTGTaGGGACTCACACGCTCATCCCTCATTTGCGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: DVGWACRALPSV*GLTRSSLICAS Trigger: GGAGGCGCAAATGAGGGATGAGCGTGTGAGTCCCCACACACTGGGTAATGCACGGCAGGCCCATCCTACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | CCAGTGAGGTCAGGGGCTGGCCAAACCACAGGAAGATaGAAGGGGAGTTGTGGGTGGGCAACTCTGCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PVRSGAGQTTGR*KGSCGWATLLT Trigger: AGTGAGCAGAGTTGCCCACCCACAACTCCCCTTCCATCTTCCTGTGGTTTGGCCAGCCCCTGACCTCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCACAGGCCACCACTGCCCGATGGCTCCAAGTATTTTCTGGGGGTCTGGGCAGAGAAATAAGGGTGTaGCCCTGCCCTGGGTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: MAQATTARWLQVFSGGLGREIRV*PCPGFL Trigger: GAGGAACCCAGGGCAGGGCAACACCCTTATTTCTCT...GCCCAGACCCCCAGAAAATACTTGGAGCCATCGGGCAGTGGTGGCCTGTGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGAAAAGCCCTGAGCTCGCTCTGGGCTCAGAGGAGCCATGGAAACCACCAGGACAACCAATGCCTTaGGCTCTGGGTTCAATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RLKSPELALGSEEPWKPPGQPMP*ALGSMP Trigger: GGGCATTGAACCCAGAGCCAAAGGCATTGGTTGTCC...TGGTGGTTTCCATGGCTCCTCTGAGCCCAGAGCGAGCTCAGGGCTTTTCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | CAGGAAGATGGAAGGGGAGTTGTGGGTGGGCAACTCTaGTCACTTCATAGTGGGCACTCTCGGGGCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QEDGRGVVGGQL*SLHSGHSRGWK Trigger: CTTCCAGCCCCGAGAGTGCCCACTATGAAGTGAGCAGAGTTGCCCACCCACAACTCCCCTTCCATCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGCTAACACACACACATGCAATCTCAAGACACAGTCGCATCGAGATGTAGGTCTGGGCAGCCCCTaGGCTGGGCAAACTCGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HRANTHTCNLKTQSHRDVGLGSP*AGQTRA Trigger: GGCCCGAGTTTGCCCAGCCAAGGGGCTGCCCAGACC...TACATCTCGATGCGACTGTGTCTTGAGATTGCATGTGTGTGTGTTAGCTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | CAGCTGTTTGGGGGCTTTGGCCAAGAAGAGTCCTCCTaGGGACAATGGGGACTTGGAAGCACATGGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QLFGGFGQEESS*GQWGLGSTWTG Trigger: TCCTGTCCATGTGCTTCCAAGTCCCCATTGTCCCCAGGAGGACTCTTCTTGGCCAAAGCCCCCAAACAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | AAAAGCCCTGAGCTCGCTCTGGGCTCAGAGGAGCCATaGAAACCACCAAGGACTTCAGTTGAAGGGTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KSPELALGSEEP*KPPRTSVEGSG Trigger: CCCAGACCCTTCAACTGAAGTCCTTGGTGGTTTCCATGGCTCCTCTGAGCCCAGAGCGAGCTCAGGGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | CTCAGAGGAGCCATGGAAACCACCAAGGACTTCAGTTaGAGGGTCTGGGCTCTCTCAGGACCATTCGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRGAMETTKDFS*RVWALSGPFGF Trigger: GAACCCGAATGGTCCTGAGAGAGCCCAGACCCTTCAACTGAAGTCCTTGGTGGTTTCCATGGCTCCTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | GACACAGCACAGTTGTGGGAAAGAGGTTCCCCTACATaGGCAGGATGGTCCATCTCACCTGGGTCTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTAQLWERGSPT*AGWSISPGSQW Trigger: CCACTGAGACCCAGGTGAGATGGACCATCCTGCTCATGTAGGGGAACCTCTTTCCCACAACTGTGCTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | GAAGGGTCTGGGCTCTCTCAGGACCATTCGGGTTCTTaGGTGGCTGGGTTTCCTTGCCTATTTGCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EGSGLSQDHSGS*VAGFPCLFASL Trigger: GAGAGATGCAAATAGGCAAGGAAACCCAGCCACGCAAGAACCCGAATGGTCCTGAGAGAGCCCAGACCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | CTGATGACCTTCCCAAAGAGCACACATGCCTGTCAGTaGTGTGCCTCATCCCACTCCAGCCATCTTCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LMTFPKSTHACQ*CASSHSSHLPC Trigger: GCATGGAAGATGGCTGGAGTGGGATGAGGCACATCACTGACAGGCATGTGTGCTCTTTGGGAAGGTCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | GACCTTCCCAAAGAGCACACATGCCTGTCAGTGATGTaGCTCATCCCACTCCAGCCATCTTCCATGCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: DLPKEHTCLSVM*LIPLQPSSMLC Trigger: ACACAGCATGGAAGATGGCTGGAGTGGGATGAGGCACATCACTGACAGGCATGTGTGCTCTTTGGGAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | TGTGCTAAAGTCCAAAGAGGATCCATTTGGAAGGAGTaGCTTGGCCGGGGCCGTGCTTCTTTAGGTCGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CAKVQRGSIWKE*LGRGRASLGRV Trigger: AACCCGACCTAAAGAAGCACGGCCCCGGCCAAGCCACTCCTTCCAAATGGATCCTCTTTGGACTTTAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | CCTATAGAGCTCCTACTTCCATGGAAGGAAGCGCTGTaGAGCTTTGCTGCTAAGGGCTCACTCTCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PIELLLPWKEAL*SFAAKGSLSGA Trigger: AGCTCCAGAGAGTGAGCCCTTAGCAGCAAAGCTCCACAGCGCTTCCTTCCATGGAAGTAGGAGCTCTATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | CTCCACAGATGTGCTAAAGTCCAAAGAGGATCCATTTaGAAGGAGTGGCTTGGCCGGGGCCGTGCTTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LHRCAKVQRGSI*KEWLGRGRASL Trigger: TAAAGAAGCACGGCCCCGGCCAAGCCACTCCTTCCAAATGGATCCTCTTTGGACTTTAGCACATCTGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | GCTCAAGTACCCAAGTTCTGCCCTCCCATGCATGTGTaGTACACAGCATCCTTCCAGGGTTGCCTGTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AQVPKFCPPMHV*YTASFQGCLLF Trigger: AAACAACAGGCAACCCTGGAAGGATGCTGTGTACCACACATGCATGGGAGGGCAGAACTTGGGTACTTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | TTACCTCCACCTTCAAAGGACCTCAGAATCTGCTGTCTGGGCATAGAAAGGAGAGGGGACAATGGGGACTaGGAAGCACATGGACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPPPSKDLRICCLGIERRGDNGD*EAHGQD Trigger: GTCCTGTCCATGTGCTTCCAAGTCCCCATTGTCCCC...TCTCCTTTCTATGCCCAGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGATATCCTGTGTCATCTTCACAGAGGCCCAGAGAAGCGCTCTTTCTTTTCCACCAAGGACTTCAGTaGAAGGGTCTGGGCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGYPVSSSQRPREALFLFHQGLQ*KGLGSL Trigger: GAGAGAGCCCAGACCCTTCAACTGAAGTCCTTGGTG...GAAAAGAAAGAGCGCTTCTCTGGGCCTCTGTGAAGATGACACAGGATATCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | GCCAAAGTAAGGTTTCCTGTCAGATGTGGCCATCTGTaGCTAACCGTCTCAGGGTGGGGAGGAAGCATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: AKVRFPVRCGHL*LTVSGWGGSIL Trigger: TAAGATGCTTCCTCCCCACCCTGAGACGGTTAGTCACAGATGGCCACATCTGACAGGAAACCTTACTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | CTGGGACTCAGGCACACTACATCCCACAAACACATATaGACGAGGCACATCAGATACACAGCCTGCAACACA | + |
|
Preference number: 3 (lower is better) Translates to: LGLRHTTSHKHI*TRHIRYTACNT Trigger: TGTGTTGCAGGCTGTGTATCTGATGTGCCTCGTGCATATGTGTTTGTGGGATGTAGTGTGCCTGAGTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | GGCTTCTCGTTCCTGTTCTCATTTACCTACCTGGGATaGCCTATAGAGCTCCTACTTCCATGGAAGGAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: GFSFLFSFTYLG*PIELLLPWKEA Trigger: CGCTTCCTTCCATGGAAGTAGGAGCTCTATAGGCCATCCCAGGTAGGTAAATGAGAACAGGAACGAGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAACCAGGTATGTATCAAGTAGAAATTCTCTTACCTCCACCTTCAAAGGACCTCGTGGCTGGGTTTCCTaGCCTATTTGCATCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GTRYVSSRNSLTSTFKGPRGWVS*PICISP Trigger: TGGAGAGATGCAAATAGGCAAGGAAACCCAGCCACG...AGGTCCTTTGAAGGTGGAGGTAAGAGAATTTCTACTTGATACATACCTGGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | TTATGCATACGACTTCCTGGTTTAGACCCACACACATaGACACCAGTCTTAGCCCACGTGACAGTTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCIRLPGLDPHT*TPVLAHVTVVS Trigger: TGAGACAACTGTCACGTGGGCTAAGACTGGTGTTCATGTGTGTGGGTCTAAACCAGGAAGTCGTATGCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | ATATGTATCCTTTCCAATGCTCAAGTACCCAAGTTCTaGCCTCCCATGCATGTGTGGTACACAGCATCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ICILSNAQVPKF*PPMHVWYTASF Trigger: GAAGGATGCTGTGTACCACACATGCATGGGAGGGCAGAACTTGGGTACTTGAGCATTGGAAAGGATACATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | CACACGAGATGGCTAGCACATACCGAGAAAATGAACTaGGACTCAGGCACACTACATCCCACAAACACATAT | + |
|
Preference number: 3 (lower is better) Translates to: HTRWLAHTEKMN*DSGTLHPTNTY Trigger: ATATGTGTTTGTGGGATGTAGTGTGCCTGAGTCCCAGTTCATTTTCTCGGTATGTGCTAGCCATCTCGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTCTCATTTACCTACCTGGGATGGCCTATAGAGCTCCTACTTCCATGGAAGGACACACATGCCGTTTaGCAAGTACATGCATATACA | + |
|
Preference number: 3 (lower is better) Translates to: LFSFTYLGWPIELLLPWKDTHAV*QVHAYT Trigger: TGTATATGCATGTACTTGCAAAACGGCATGTGTGTC...CTTCCATGGAAGTAGGAGCTCTATAGGCCATCCCAGGTAGGTAAATGAGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | CTCATCCCACTCCAGCCATCTTCCATGCTGTGTGTGTaGATGTGTGTATGTATGTGTGTGTATGTGTACATA | + |
|
Preference number: 3 (lower is better) Translates to: LIPLQPSSMLCV*MCVCMCVYVYI Trigger: TATGTACACATACACACACATACATACACACATGCACACACACAGCATGGAAGATGGCTGGAGTGGGATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | TTACCTCCACCTTCAAAGGACCTCAGAATCTGCTGTCTGGGCATAGAAAGGAGATCTCTGAGAAAGAAGTaGTACGACTTATGCATACGA | + |
|
Preference number: 3 (lower is better) Translates to: LPPPSKDLRICCLGIERRSLRKK*YDLCIR Trigger: TCGTATGCATAAGTCGTACAACTTCTTTCTCAGAGA...TCTCCTTTCTATGCCCAGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | GCAAGTACATGCATATACAAGCTAGCACATGCAATCTaGAAGCACACGAGATGGCTAGCACATACCGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASTCIYKLAHAI*KHTRWLAHTEK Trigger: TTTCTCGGTATGTGCTAGCCATCTCGTGTGCTTTCAGATTGCATGTGCTAGCTTGTATATGCATGTACTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR TCA 72 bp | GTGGGGAGGAAGCATCTTACTCCAATTCTTGCTCTCTaGGAAAGAAGTTGTACGACTTATGCATACGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VGRKHLTPILAL*ERSCTTYAYDF Trigger: GAAGTCGTATGCATAAGTCGTACAACTTCTTTCTCAGAGAGCAAGAATTGGAGTAAGATGCTTCCTCCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | GTCATCATGGTTGGTTTTGTACATCATCTTAGCATTTaGATCATACAAAGTGGGGAGCACGGCCATGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VIMVGFVHHLSI*IIQSGEHGHGF Trigger: AAAGCCATGGCCGTGCTCCCCACTTTGTATGATGCAAATGCTAAGATGATGTACAAAACCAACCATGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CCA 72 bp | CAGGCTATGTCAGAAATATCAATCATTACATCTCCCTaGGCTTTGTGTGGGTGGAACCAGGTATGTATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QAMSEISIITSP*ALCGWNQVCIK Trigger: CTTGATACATACCTGGTTCCACCCACACAAAGCCCAGGGAGATGTAATGATTGATATTTCTGACATAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGTAGAAATTCTCTTACCTCCACCTTCAAAGGACCTCAGAATCTGCTGTCTTACCCATCTGATGCTTaGTACTGTGCCGTTCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: SSRNSLTSTFKGPQNLLSYPSDA*YCAVHY Trigger: GTAATGAACGGCACAGTACAAAGCATCAGATGGGTA...AGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAAGAGAATTTCTACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | ATTCTCTTACCTCCACCTTCAAAGGACCTCAGAATCTaGTGTCTGGGCATAGAAAGGAGACATAAATCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILLPPPSKDLRI*CLGIERRHKSR Trigger: TCTAGATTTATGTCTCCTTTCTATGCCCAGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAAGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR GCA 72 bp | ACATGTAACCTGTCACTCTTGACACACATGCCGTTTTaGAAGTACATGCATATACAAGCTAGCACATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TCNLSLLTHMPF*KYMHIQASTCN Trigger: ATTGCATGTGCTAGCTTGTATATGCATGTACTTGCAAAACGGCATGTGTGTCAAGAGTGACAGGTTACATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGTAGAAATTCTCTTACCTCCACCTTCAAAGGACCTCAGAATCTGCTGTCTATCTTACTCCAATTCTaGCTCTCTGAGAAAGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSRNSLTSTFKGPQNLLSILLQF*LSEKEV Trigger: AACTTCTTTCTCAGAGAGCAAGAATTGGAGTAAGAT...AGACAGCAGATTCTGAGGTCCTTTGAAGGTGGAGGTAAGAGAATTTCTACTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR GCA 90 bp | TTAGGTCGGGTTGGGGAGAGGTGTGCTCCTGGCCAGCAGCGGCACCAGGAAGAGCGCTCTTCCTCCTGCTaGCTCAGGGCCTCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRVGERCAPGQQRHQEERSSSC*LRASCR Trigger: GCGGCAGGAGGCCCTGAGGCAGCAGGAGGAAGAGCG...CTCTTCCTGGTGCCGCTGCTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR GCA 90 bp | CCGTGCTTCTTTAGGTCGGGTTGGGGAGAGGTGTGCTCCTGGCCAGCAGCGGCATTGTCTCGGATCTGCTaGCGGACCTTCTCGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PCFFRSGWGEVCSWPAAALSRIC*RTFSRS Trigger: CGAGCGCGAGAAGGTCCGGCAGCAGATCCGAGACAA...TGCCGCTGCTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGGCAAACTCGGGCCTAGCCTGGCAGTGGGGTCCCAGGACCTAAGTCAGGCCCTGGCAGATATTTaGGCACTGTGTCCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WLGKLGPSLAVGSQDLSQALADI*ALCPGC Trigger: GCATCCTGGACACAGTGCTCAAATATCTGCCAGGGC...CTGACTTAGGTCCTGGGACCCCACTGCCAGGCTAGGCCCGAGTTTGCCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR GCA 90 bp | CCGTGCTTCTTTAGGTCGGGTTGGGGAGAGGTGTGCTCCTGGCCAGCAGCGGCATTCTTGAACATGTCCTaGAGCGGCCCTGGCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: PCFFRSGWGEVCSWPAAAFLNMS*SGPGRY Trigger: ATATCTGCCAGGGCCGCTGCAGGACATGTTCAAGAA...TGCCGCTGCTGGCCAGGAGCACACCTCTCCCCAACCCGACCTAAAGAAGCACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCCTCCTCCTCCTCCTTCCTTTTTCAAGCTACTTGGGAGTGAAACAGGGGCGTGTTTCGCCTTaGGCTCTTCCTCCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLPFSSYLGVKQGRVSP*ALPPAA Trigger: GGCAGCAGGAGGAAGAGCGCAAGGCGAAACACGCCC...CTGTTTCACTCCCAAGTAGCTTGAAAAAGGAAGGAGGAGGAGGAGGAGGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGTGGGGTCCCAGGACCTAAGTCAGATGAGAGAGAAATAAGGGTGTTGCCCTACTTGTCTCGGATCTaGTGCCGGACCTTCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGVPGPKSDEREIRVLPYLSRI*CRTFSR Trigger: GCGCGAGAAGGTCCGGCAGCAGATCCGAGACAAGTA...GGGCAACACCCTTATTTCTCTCTCATCTGACTTAGGTCCTGGGACCCCACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR GCA 90 bp | GGAAACCACCAAGGACTTCAGTTGAAGGGTCTGGGCTCTCTCAGGACCATTCGGGGGCTGTTCCAGGGCTaGCTTCTCCTCTGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNHQGLQLKGLGSLRTIRGLFQG*LLLCLF Trigger: AAAGAGGCAGAGGAGAAGGCAGCCCTGGAACAGCCC...CCGAATGGTCCTGAGAGAGCCCAGACCCTTCAACTGAAGTCCTTGGTGGTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 72 bp | TCAGGACCATTCGGGTTCTTGCGTGGCTGGGTTTCCTaGCCTATTTGCATCTCTCCAGGTCTTGGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGPFGFLRGWVS*PICISPGLGLH Trigger: GTGGAGACCAAGACCTGGAGAGATGCAAATAGGCAAGGAAACCCAGCCACGCAAGAACCCGAATGGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 72 bp | AGCTCCTACTTCCATGGAAGGAAGCGCTGTGGAGCTTaGCTGCTAAGGGCTCACTCTCTGGAGCTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSYFHGRKRCGA*LLRAHSLELKW Trigger: CCATTTCAGCTCCAGAGAGTGAGCCCTTAGCAGCAAAGCTCCACAGCGCTTCCTTCCATGGAAGTAGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR GCA 90 bp | CACAGAGCTAACACACACACATGCAATCTCAAGACACAGTCGCATCGAGATGTATTGCGCTCTTCCTCCTaGTGCCTCAGGGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRANTHTCNLKTQSHRDVLRSSS*CLRASC Trigger: GCAGGAGGCCCTGAGGCAGCAGGAGGAAGAGCGCAA...TACATCTCGATGCGACTGTGTCTTGAGATTGCATGTGTGTGTGTTAGCTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 72 bp | ATTCGGGTTCTTGCGTGGCTGGGTTTCCTTGCCTATTaGCATCTCTCCAGGTCTTGGTCTCCACTACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IRVLAWLGFLAY*HLSRSWSPLPI Trigger: GATGGGTAGTGGAGACCAAGACCTGGAGAGATGCAAATAGGCAAGGAAACCCAGCCACGCAAGAACCCGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 72 bp | GCTGGGTTTCCTTGCCTATTTGCATCTCTCCAGGTCTaGGTCTCCACTACCCATCTGATGCTTTGTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGFPCLFASLQV*VSTTHLMLCTV Trigger: CACAGTACAAAGCATCAGATGGGTAGTGGAGACCAAGACCTGGAGAGATGCAAATAGGCAAGGAAACCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| 3UTR CAA 72 bp | GCATCTTACTCCAATTCTTGCTCTCTGAGAAAGAAGTaGTACGACTTATGCATACGACTTCCTGGTTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASYSNSCSLRKK*YDLCIRLPGLD Trigger: GTCTAAACCAGGAAGTCGTATGCATAAGTCGTACAACTTCTTTCTCAGAGAGCAAGAATTGGAGTAAGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCACAGGCCACCACTGCCCGATGGCTCCAAGTATTTTCTGGGGGTCTGGGCGGCCCTGGCAGATATTaGAGCACTGTGTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MAQATTARWLQVFSGGLGGPGRY*STVSRM Trigger: CATCCTGGACACAGTGCTCAAATATCTGCCAGGGCC...GCCCAGACCCCCAGAAAATACTTGGAGCCATCGGGCAGTGGTGGCCTGTGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTCTCATTTACCTACCTGGGATGGCCTATAGAGCTCCTACTTCCATGGAAGCGGGCGTGTTTCGCCTaGCGCTCTTCCTCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSFTYLGWPIELLLPWKRACFA*RSSSCC Trigger: GCAGCAGGAGGAAGAGCGCAAGGCGAAACACGCCCG...CTTCCATGGAAGTAGGAGCTCTATAGGCCATCCCAGGTAGGTAAATGAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS GCA 72 bp | GGATCTGCTGCCGGACCTTCTCGCGCTCGGCTTCCATaGGGGCGTGTTTCGCCTTGCGCTCTTCCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSAAGPSRARLP*GRVSPCALPPA Trigger: AGCAGGAGGAAGAGCGCAAGGCGAAACACGCCCGCATGGAAGCCGAGCGCGAGAAGGTCCGGCAGCAGATCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||
| CDS GCA 72 bp | TCTTCCTTCTTCTTCAGCCCATACTTGTCTCGGATCTaGTGCCGGACCTTCTCGCGCTCGGCTTCCATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSFFFSPYLSRI*CRTFSRSASMR Trigger: CCGCATGGAAGCCGAGCGCGAGAAGGTCCGGCAGCAGATCCGAGACAAGTATGGGCTGAAGAAGAAGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026985.9 |
||