Pregenerated sensors for CPLANE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073733Ensembl transcript IDs: ENSMUST00000097813.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCGCCTGCCGGAAGGCTGTaGGGTCTCGCGCTGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: QDRSEDRQYQPLPRMLSPPAGRL*GLALAH Trigger: ATGTGCCAGCGCGAGACCTCACAGCCTTCCGGCAGG...CGGTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR GCA 90 bp | AGCCCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGGGCAGTTCCCAGGCCTaGCGGAAGGCTGTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SPQDRSEDRQYQPLPRMLGSSQA*RKAVRS Trigger: AGACCTCACAGCCTTCCGGCAGGCCTGGGAACTGCC...CAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CCA 90 bp | CTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACTGCCAGCCGCCGCCCTaGCACACTCTTCACCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: LRIEVRIASTSLYPGCCHCQPPP*HTLHPE Trigger: TTCCGGGTGAAGAGTGTGCCAGGGCGGCGGCTGGCA...GTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CCA 90 bp | CAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCGAGGCCGGCTGCCACCTaGTCCTGGTGCCACAACTGT | + |
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Preference number: 4 (lower is better) Translates to: QDRSEDRQYQPLPRMLSPRPAAT*SWCHNC Trigger: ACAGTTGTGGCACCAGGACCAGGTGGCAGCCGGCCT...CGGTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR GCA 90 bp | CTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCAGGCCGGCCAGCTTTaGCACCAGTGCTGTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LRIEVRIASTSLYPGCCHQAGQL*HQCCLA Trigger: GGCAAGACAGCACTGGTGGCAAAGCTGGCCGGCCTG...GTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR GCA 90 bp | CTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCCACCAGTGCTGTCTTaGCCACACCACTCTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LRIEVRIASTSLYPGCCHPPVLS*PHHSSR Trigger: CCGGGAAGAGTGGTGTGGGCAAGACAGCACTGGTGG...GTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR GCA 90 bp | CCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACAGCTAGCCCAGCCCTaGCATCCAGTGTTCGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: PQDRSEDRQYQPLPRMLSQLAQP*HPVFVR Trigger: ACGGACGAACACTGGATGGCAGGGCTGGGCTAGCTG...TGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CCA 90 bp | CAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCGCGCTGGCCTTCAGCTTaGCTGGCCAAAACACCACAG | + |
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Preference number: 4 (lower is better) Translates to: QDRSEDRQYQPLPRMLSPRWPSA*LAKTPQ Trigger: CTGTGGTGTTTTGGCCAGCCAAGCTGAAGGCCAGCG...CGGTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CCA 90 bp | GCCCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTGCTGCCACCTGGTCCTaGTGCCACAACTGTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ALRIEVRIASTSLYPGCCAATWS*CHNCSA Trigger: TGCAGAACAGTTGTGGCACCAGGACCAGGTGGCAGC...ACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR GCA 90 bp | CCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCAGCCACCTGGTCCTGGTaGCACAACTGTTCTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PQDRSEDRQYQPLPRMLSATWSW*HNCSAR Trigger: CCTTGCAGAACAGTTGTGGCACCAGGACCAGGTGGC...TGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR GCA 90 bp | CTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCAGCTTTGCCACCAGTaGTGTCTTGCCCACACCACT | + |
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Preference number: 4 (lower is better) Translates to: LRIEVRIASTSLYPGCCHQLCHQ*CLAHTT Trigger: AGTGGTGTGGGCAAGACAGCACTGGTGGCAAAGCTG...GTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACGTCTCATGCCAGTCTaGGACAATCACCGAACCGTG | + |
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Preference number: 4 (lower is better) Translates to: PQDRSEDRQYQPLPRMLSRLMPV*DNHRTV Trigger: CACGGTTCGGTGATTGTCCCAGACTGGCATGAGACG...TGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR TCA 90 bp | CAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCGTGTGATCAAACTTCTTaGGGGCAGACTCCCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: QDRSEDRQYQPLPRMLSPCDQTS*GQTPHS Trigger: ACTGTGGGGAGTCTGCCCTCAAGAAGTTTGATCACA...CGGTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCATGTGAGGTCTCGCGCTaGCACATCTGTGTGCATGTA | + |
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Preference number: 4 (lower is better) Translates to: PQDRSEDRQYQPLPRMLSCEVSR*HICVHV Trigger: TACATGCACACAGATGTGCCAGCGCGAGACCTCACA...TGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CCA 90 bp | GCCCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTATGCCAGTGGTCTCATaGTGTACTATAGGCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALRIEVRIASTSLYPGCCMPVVS*CTIGTS Trigger: GGAAGTGCCTATAGTACACCATGAGACCACTGGCAT...ACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR TCA 90 bp | AGCCCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCTGTGTGCATGTACTaGTCAAACTTGGACCCGATA | + |
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Preference number: 4 (lower is better) Translates to: SPQDRSEDRQYQPLPRMLSVCMY*SNLDPI Trigger: TATCGGGTCCAAGTTTGATCAGTACATGCACACAGA...CAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR GCA 90 bp | CTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACGAAGAGGAAGGCATCTaGATTCTCTTTACAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LRIEVRIASTSLYPGCCHEEEGI*ILFTSR Trigger: CCGGCTTGTAAAGAGAATGCAGATGCCTTCCTCTTC...GTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS CCA 90 bp | CCCAGCCCTGCCATCCAGTGTTCGTCCGTCTGCCAGCCGCCGCCCTaGCACACTCTTCACCCGGAACAAGGGCAGTTCCCAGGCCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: PSPAIQCSSVCQPPP*HTLHPEQGQFPGLP Trigger: CGGCAGGCCTGGGAACTGCCCTTGTTCCGGGTGAAGAGTGTGCCAGGGCGGCGGCTGGCAGACGGACGAACACTGGATGGCAGGGCTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS GCA 90 bp | CGCCCTGGCACACTCTTCACCCGGAACAAGGGCAGTTCCCAGGCCTaGCGGAAGGCTGTGAGGTCTCGCGCTGGCACATCTGTGTGCATG | + |
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Preference number: 5 (lower is better) Translates to: RPGTLFTRNKGSSQA*RKAVRSRAGTSVCM Trigger: CATGCACACAGATGTGCCAGCGCGAGACCTCACAGCCTTCCGGCAGGCCTGGGAACTGCCCTTGTTCCGGGTGAAGAGTGTGCCAGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS CCA 90 bp | ACCTGGTCCTGGTGCCACAACTGTTCTGCAAGGCCATTGAGCACATaGGCTGTGTCAGCTAGCCCAGCCCTGCCATCCAGTGTTCGTCCG | + |
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Preference number: 5 (lower is better) Translates to: TWSWCHNCSARPLST*AVSASPALPSSVRP Trigger: CGGACGAACACTGGATGGCAGGGCTGGGCTAGCTGACACAGCCCATGTGCTCAATGGCCTTGCAGAACAGTTGTGGCACCAGGACCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS GCA 90 bp | TTGCGCAGGATGCAGGCTAAGTACTCCTTACCCTCGACCGTCTCATaGCAGTCTGGGACAATCACCGAACCGTGCATGGGAGGTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LRRMQAKYSLPSTVS*QSGTITEPCMGGLA Trigger: GGCCAGACCTCCCATGCACGGTTCGGTGATTGTCCCAGACTGGCATGAGACGGTCGAGGGTAAGGAGTACTTAGCCTGCATCCTGCGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS GCA 90 bp | GGCGTTCAAGCAACCCAAACTCCCGCCGGCGATTCTTGCGCAGGATaGAGGCTAAGTACTCCTTACCCTCGACCGTCTCATGCCAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GVQATQTPAGDSCAG*RLSTPYPRPSHASL Trigger: CAGACTGGCATGAGACGGTCGAGGGTAAGGAGTACTTAGCCTGCATCCTGCGCAAGAATCGCCGGCGGGAGTTTGGGTTGCTTGAACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CAA 90 bp | GCCCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTGCCACCAGTGCTGTCTaGCCCACACCACTCTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: ALRIEVRIASTSLYPGCCATSAV*PTPLFP Trigger: CGGGAAGAGTGGTGTGGGCAAGACAGCACTGGTGGC...ACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CAA 90 bp | CCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCAGGCCGGCCAGCTTaGCCACCAGTGCTGTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: PQDRSEDRQYQPLPRMLSPGRPA*PPVLSC Trigger: GCAAGACAGCACTGGTGGCAAAGCTGGCCGGCCTGG...TGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 90 bp | TCTTCACCCGGAACAAGGGCAGTTCCCAGGCCTGCCGGAAGGCTGTaGGGTCTCGCGCTGGCACATCTGTGTGCATGTACTGATCAAACT | + |
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Preference number: 5 (lower is better) Translates to: SSPGTRAVPRPAGRL*GLALAHLCACTDQT Trigger: AGTTTGATCAGTACATGCACACAGATGTGCCAGCGCGAGACCTCACAGCCTTCCGGCAGGCCTGGGAACTGCCCTTGTTCCGGGTGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS CCA 90 bp | CAAGGGCAGTTCCCAGGCCTGCCGGAAGGCTGTGAGGTCTCGCGCTaGCACATCTGTGTGCATGTACTGATCAAACTTGGACCCGATAAC | + |
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Preference number: 5 (lower is better) Translates to: QGQFPGLPEGCEVSR*HICVHVLIKLGPDN Trigger: GTTATCGGGTCCAAGTTTGATCAGTACATGCACACAGATGTGCCAGCGCGAGACCTCACAGCCTTCCGGCAGGCCTGGGAACTGCCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 90 bp | CAGTCGCTGGCCTTCAGCTTGGCTGGCCAAAACACCACAGTGGTCTaGATGCCAGTGGTCTCATGGTGTACTATAGGCACTTCCAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: QSLAFSLAGQNTTVV*MPVVSWCTIGTSRP Trigger: CGGCCTGGAAGTGCCTATAGTACACCATGAGACCACTGGCATTCAGACCACTGTGGTGTTTTGGCCAGCCAAGCTGAAGGCCAGCGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS GCA 90 bp | AGTGGTCTCATGGTGTACTATAGGCACTTCCAGGCCGGCCAGCTTTaGCACCAGTGCTGTCTTGCCCACACCACTCTTCCCGGACACAAA | + |
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Preference number: 5 (lower is better) Translates to: SGLMVYYRHFQAGQL*HQCCLAHTTLPGHK Trigger: TTTGTGTCCGGGAAGAGTGGTGTGGGCAAGACAGCACTGGTGGCAAAGCTGGCCGGCCTGGAAGTGCCTATAGTACACCATGAGACCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CAA 90 bp | GCCCTCAGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTTCGCTGGCCTTCAGCTaGGCTGGCCAAAACACCACA | + |
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Preference number: 5 (lower is better) Translates to: ALRIEVRIASTSLYPGCCSLAFS*AGQNTT Trigger: TGTGGTGTTTTGGCCAGCCAAGCTGAAGGCCAGCGA...ACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCTGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 90 bp | CACCACTCTTCCCGGACACAAAGATCTTATAGCTGGCGGTATCAATaGCCACGGAAGGGGGCAGCACCGGGCGTTCAAGCAACCCAAACT | + |
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Preference number: 5 (lower is better) Translates to: HHSSRTQRSYSWRYQ*PRKGAAPGVQATQT Trigger: AGTTTGGGTTGCTTGAACGCCCGGTGCTGCCCCCTTCCGTGGTCATTGATACCGCCAGCTATAAGATCTTTGTGTCCGGGAAGAGTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 90 bp | CGGAAGGCTGTGAGGTCTCGCGCTGGCACATCTGTGTGCATGTACTaGTCAAACTTGGACCCGATAACTATCTTGACGAGCCCAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: RKAVRSRAGTSVCMY*SNLDPITILTSPGA Trigger: AGCTCCTGGGCTCGTCAAGATAGTTATCGGGTCCAAGTTTGATCAGTACATGCACACAGATGTGCCAGCGCGAGACCTCACAGCCTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS-3UTR CAA 90 bp | AGGATAGAAGTGAGGATCGCCAGTACCAGCCTCTACCCAGGATGTTGTCACCGTTGTTCTGCAAGGCCATaGAGCACATGGGCTGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RIEVRIASTSLYPGCCHRCSARP*STWAVS Trigger: TGACACAGCCCATGTGCTCAATGGCCTTGCAGAACA...ACGGTGACAACATCCTGGGTAGAGGCTGGTACTGGCGATCCTCACTTCTATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS CCA 72 bp | GCCATCCAGTGTTCGTCCGTCTGCCAGCCGCCGCCCTaGCACACTCTTCACCCGGAACAAGGGCAGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: AIQCSSVCQPPP*HTLHPEQGQFP Trigger: TGGGAACTGCCCTTGTTCCGGGTGAAGAGTGTGCCAGGGCGGCGGCTGGCAGACGGACGAACACTGGATGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 72 bp | GGAACAAGGGCAGTTCCCAGGCCTGCCGGAAGGCTGTaGGGTCTCGCGCTGGCACATCTGTGTGCATGTACT | + |
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Preference number: 6 (lower is better) Translates to: GTRAVPRPAGRL*GLALAHLCACT Trigger: AGTACATGCACACAGATGTGCCAGCGCGAGACCTCACAGCCTTCCGGCAGGCCTGGGAACTGCCCTTGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS CAA 72 bp | ACCTGGTCCTGGTGCCACAACTGTTCTGCAAGGCCATaGAGCACATGGGCTGTGTCAGCTAGCCCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TWSWCHNCSARP*STWAVSASPAL Trigger: CAGGGCTGGGCTAGCTGACACAGCCCATGTGCTCAATGGCCTTGCAGAACAGTTGTGGCACCAGGACCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS GCA 72 bp | GCAACCCAAACTCCCGCCGGCGATTCTTGCGCAGGATaGAGGCTAAGTACTCCTTACCCTCGACCGTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: ATQTPAGDSCAG*RLSTPYPRPSH Trigger: ATGAGACGGTCGAGGGTAAGGAGTACTTAGCCTGCATCCTGCGCAAGAATCGCCGGCGGGAGTTTGGGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS CCA 72 bp | TGGTGCCACAACTGTTCTGCAAGGCCATTGAGCACATaGGCTGTGTCAGCTAGCCCAGCCCTGCCATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: WCHNCSARPLST*AVSASPALPSS Trigger: ACTGGATGGCAGGGCTGGGCTAGCTGACACAGCCCATGTGCTCAATGGCCTTGCAGAACAGTTGTGGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 72 bp | TCCCGGACACAAAGATCTTATAGCTGGCGGTATCAATaGCCACGGAAGGGGGCAGCACCGGGCGTTCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRTQRSYSWRYQ*PRKGAAPGVQA Trigger: TGCTTGAACGCCCGGTGCTGCCCCCTTCCGTGGTCATTGATACCGCCAGCTATAAGATCTTTGTGTCCGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS GCA 72 bp | CTTCCAGGCCGGCCAGCTTTGCCACCAGTGCTGTCTTaGCCACACCACTCTTCCCGGACACAAAGATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: LPGRPALPPVLS*PHHSSRTQRSY Trigger: ATAAGATCTTTGTGTCCGGGAAGAGTGGTGTGGGCAAGACAGCACTGGTGGCAAAGCTGGCCGGCCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS CCA 72 bp | TTCCCAGGCCTGCCGGAAGGCTGTGAGGTCTCGCGCTaGCACATCTGTGTGCATGTACTGATCAAACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: FPGLPEGCEVSR*HICVHVLIKLG Trigger: TCCAAGTTTGATCAGTACATGCACACAGATGTGCCAGCGCGAGACCTCACAGCCTTCCGGCAGGCCTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 72 bp | GCCTTCAGCTTGGCTGGCCAAAACACCACAGTGGTCTaGATGCCAGTGGTCTCATGGTGTACTATAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: AFSLAGQNTTVV*MPVVSWCTIGT Trigger: AGTGCCTATAGTACACCATGAGACCACTGGCATTCAGACCACTGTGGTGTTTTGGCCAGCCAAGCTGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 72 bp | AAGGCATCTGCATTCTCTTTACAAGCCGGCAGCATGTaGTCAAACTTCTTGAGGGCAGACTCCCCACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: KASAFSLQAGSM*SNFLRADSPQS Trigger: GGACTGTGGGGAGTCTGCCCTCAAGAAGTTTGATCACATGCTGCCGGCTTGTAAAGAGAATGCAGATGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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| CDS TCA 72 bp | GTGAGGTCTCGCGCTGGCACATCTGTGTGCATGTACTaGTCAAACTTGGACCCGATAACTATCTTGACGAGC | + |
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Preference number: 6 (lower is better) Translates to: VRSRAGTSVCMY*SNLDPITILTS Trigger: GCTCGTCAAGATAGTTATCGGGTCCAAGTTTGATCAGTACATGCACACAGATGTGCCAGCGCGAGACCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097813.3 |
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