Pregenerated sensors for CPHX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095975Ensembl transcript IDs: ENSMUST00000184016.3
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTGTGTCTCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTaGCATCGGGACCCTCTCTTGGTAGCTCTGAGGATGCTGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: CCVSISLTLVYNEPV*HRDPLLVALRMLQW Trigger: CCACTGCAGCATCCTCAGAGCTACCAAGAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGAGACACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR GCA 90 bp | GCATTTGGTGGAACACTGACTGCAGCTGGCCAAGGAGCATCTGAGTaGCTGCTGTGTCTCCATCTCTCTGACTCTGGTGTACAACGAGCC | + |
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Preference number: 1 (lower is better) Translates to: AFGGTLTAAGQGASE*LLCLHLSDSGVQRA Trigger: GGCTCGTTGTACACCAGAGTCAGAGAGATGGAGACACAGCAGGCACTCAGATGCTCCTTGGCCAGCTGCAGTCAGTGTTCCACCAAATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CCA 90 bp | GTCTGCCATCGGGACCCTCTCTTGGTAGCTCTGAGGATGCTGCAGTaGTTGCTGATATTCCCAGTTATTCTGCTGCTGTCCTGGGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: VCHRDPLLVALRMLQ*LLIFPVILLLSWEH Trigger: ATGCTCCCAGGACAGCAGCAGAATAACTGGGAATATCAGCAACCACTGCAGCATCCTCAGAGCTACCAAGAGAGGGTCCCGATGGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CCA 90 bp | ATGCTGCAGTGGTTGCTGATATTCCCAGTTATTCTGCTGCTGTCCTaGGAGCATTGGGGAACAGTTACAATCCACCCACCTTTGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: MLQWLLIFPVILLLS*EHWGTVTIHPPLPL Trigger: CAGGGGCAAAGGTGGGTGGATTGTAACTGTTCCCCAATGCTCCCAGGACAGCAGCAGAATAACTGGGAATATCAGCAACCACTGCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR GCA 90 bp | TCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCATCGGGACCCTCTCCAATCCACCCACCTTTaGCCCTGCCTACAAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: SISLTLVYNEPVCHRDPLQSTHL*PCLQGT Trigger: TGTTCCTTGTAGGCAGGGGCAAAGGTGGGTGGATTG...GAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR GCA 90 bp | GATGTCAGACCTCCCTCAGACTTGGAGCCACTGAGAAGGTCAAAGCCCCTTAGGCTGTCAGCAGTCCCTTaGTGCCCATGTAGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: DVRPPSDLEPLRRSKPLRLSAVP*CPCSQS Trigger: GCTTTGGCTACATGGGCAGCAAGGGACTGCTGACAG...CCTAAGGGGCTTTGACCTTCTCAGTGGCTCCAAGTCTGAGGGAGGTCTGACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CAA 90 bp | TGCCATCGGGACCCTCTCTTGGTAGCTCTGAGGATGCTGCAGTGGTaGCTGATATTCCCAGTTATTCTGCTGCTGTCCTGGGAGCATTGG | + |
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Preference number: 2 (lower is better) Translates to: CHRDPLLVALRMLQW*LIFPVILLLSWEHW Trigger: CCAATGCTCCCAGGACAGCAGCAGAATAACTGGGAATATCAGCAACCACTGCAGCATCCTCAGAGCTACCAAGAGAGGGTCCCGATGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTGTCTCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCATCGGTCCCAGTTATTCTGCTaGTGTCCTGGGAGCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: CCVSISLTLVYNEPVCHRSQLFC*CPGSIG Trigger: CCCAATGCTCCCAGGACAGCAGCAGAATAACTGGGA...CCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGAGACACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGAACCCTGGATCTTTGTTGAGACTCCTGGACTCCACTTTAGCCCCTCATGCGTGTCTCCATCTCTCTaGCTCTGGTGTACAACGAGC | + |
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Preference number: 2 (lower is better) Translates to: WEPWIFVETPGLHFSPSCVSPSL*LWCTTS Trigger: GCTCGTTGTACACCAGAGTCAGAGAGATGGAGACAC...GCATGAGGGGCTAAAGTGGAGTCCAGGAGTCTCAACAAAGATCCAGGGTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGCTGTGTCTCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCAATTCTGCTGCTGTCCTaGGAGCATTGGGGAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: CLLCLHLSDSGVQRASLPILLLS*EHWGTV Trigger: AACTGTTCCCCAATGCTCCCAGGACAGCAGCAGAAT...TGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGAGACACAGCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR GCA 90 bp | TCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCATCGGGACCCTCTCTATTCCCAGTTATTCTaGTGCTGTCCTGGGAGCATT | + |
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Preference number: 2 (lower is better) Translates to: SISLTLVYNEPVCHRDPLYSQLF*CCPGSI Trigger: AATGCTCCCAGGACAGCAGCAGAATAACTGGGAATA...GAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCCATGTAGCCAAAGCAGCATTTGGTGGAACACTGACTGCAGCTGGCCAACTGAGGATGCTGCAGTaGTTGCTGATATTCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: AAHVAKAAFGGTLTAAGQLRMLQ*LLIFPV Trigger: AACTGGGAATATCAGCAACCACTGCAGCATCCTCAG...TTGGCCAGCTGCAGTCAGTGTTCCACCAAATGCTGCTTTGGCTACATGGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGGAACATGATGTCAGACCTCCCTCAGACTTGGAGCCACTGAGAAGGTCAAGCCAAAGCAGCATTTaGTGGAACACTGACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SGEHDVRPPSDLEPLRRSSQSSI*WNTDCS Trigger: GCTGCAGTCAGTGTTCCACCAAATGCTGCTTTGGCT...TGACCTTCTCAGTGGCTCCAAGTCTGAGGGAGGTCTGACATCATGTTCCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGAACCCTGGATCTTTGTTGAGACTCCTGGACTCCACTTTAGCCCCTCATGCTGCTTTCTAAATTCCTaGAGCTTGTGTGTTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: WEPWIFVETPGLHFSPSCCFLNS*SLCVLT Trigger: TGTCAAAACACACAAGCTTCAGGAATTTAGAAAGCA...GCATGAGGGGCTAAAGTGGAGTCCAGGAGTCTCAACAAAGATCCAGGGTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CCA 90 bp | ATAATAACCTCCAGGTTAACAAGGGTAAACTTCTTATTTGCCTATTTGGCCAAACAAAGCAGCATTTGGTaGAACACTGACTGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: IITSRLTRVNFLFAYLAKQSSIW*NTDCSW Trigger: CCAGCTGCAGTCAGTGTTCCACCAAATGCTGCTTTG...TTTGGCCAAATAGGCAAATAAGAAGTTTACCCTTGTTAACCTGGAGGTTATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CCA 90 bp | AACGTAACACTTGTATACAATGTGTATTCACAGTCTCATACTCTGAATACACTCCACTCATGGGAACCCTaGATCTTTGTTGAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: NVTLVYNVYSQSHTLNTLHSWEP*IFVETP Trigger: AGGAGTCTCAACAAAGATCCAGGGTTCCCATGAGTG...GAGTGTATTCAGAGTATGAGACTGTGAATACACATTGTATACAAGTGTTACGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CAA 90 bp | ATACACTCCCTCCACCTTTTCACGTCTTATAAAGTGTTACAACAGTaGATTGTCTCCTCTAGAAATAAAACCTCTAATAATCTAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: IHSLHLFTSYKVLQQ*IVSSRNKTSNNLSS Trigger: GCTGCTTAGATTATTAGAGGTTTTATTTCTAGAGGAGACAATCAACTGTTGTAACACTTTATAAGACGTGAAAAGGTGGAGGGAGTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CCA 72 bp | CAAAGCCCCTTAGGCTGCCACTGGCTACTGAGGCCCTaGAGGCTGGATTGGACAAGCTGGCCCTGCGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: QSPLGCHWLLRP*RLDWTSWPCAF Trigger: GAAAGCGCAGGGCCAGCTTGTCCAATCCAGCCTCCAGGGCCTCAGTAGCCAGTGGCAGCCTAAGGGGCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CAA 90 bp | TGCTGCCCATGTAGCCAAAGCAGCATTTGGTGGAACACTGACTGCAGCTGGCCAACAATCCACCCACCTTaGCCCCTGCCTACAAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: CCPCSQSSIWWNTDCSWPTIHPP*PLPTRN Trigger: GTTCCTTGTAGGCAGGGGCAAAGGTGGGTGGATTGT...TGGCCAGCTGCAGTCAGTGTTCCACCAAATGCTGCTTTGGCTACATGGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR GCA 72 bp | TCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTaGCATCGGGACCCTCTCTTGGTAGCTCTGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: SISLTLVYNEPV*HRDPLLVALRM Trigger: CATCCTCAGAGCTACCAAGAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CAA 90 bp | CTTATTTGCCTATTTGGCCAAATGAGCACTGGCTCTCTGGATAACTCTCTCCACCATCGGGACCCTCTCTaGGTAGCTCTGAGGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: LICLFGQMSTGSLDNSLHHRDPL*VALRML Trigger: CAGCATCCTCAGAGCTACCAAGAGAGGGTCCCGATG...GTGGAGAGAGTTATCCAGAGAGCCAGTGCTCATTTGGCCAAATAGGCAAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CCA 72 bp | ATATTCCCAGTTATTCTGCTGCTGTCCTGGGAGCATTaGGGAACAGTTACAATCCACCCACCTTTGCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: IFPVILLLSWEH*GTVTIHPPLPL Trigger: CAGGGGCAAAGGTGGGTGGATTGTAACTGTTCCCCAATGCTCCCAGGACAGCAGCAGAATAACTGGGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CCA 72 bp | TGGTTGCTGATATTCCCAGTTATTCTGCTGCTGTCCTaGGAGCATTGGGGAACAGTTACAATCCACCCACCT | + |
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Preference number: 3 (lower is better) Translates to: WLLIFPVILLLS*EHWGTVTIHPP Trigger: AGGTGGGTGGATTGTAACTGTTCCCCAATGCTCCCAGGACAGCAGCAGAATAACTGGGAATATCAGCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CCA 72 bp | CAGCACCTGCCAGGAGTCCTAGAAGATTGGCCAATCTaGTCCATAGAAGTTAAAAGCATTGATATGCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: QHLPGVLEDWPI*SIEVKSIDMPD Trigger: GTCAGGCATATCAATGCTTTTAACTTCTATGGACCAGATTGGCCAATCTTCTAGGACTCCTGGCAGGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGAAGATTGGCCAATCTGGTCCATAGAAGTTAAAAGCATTGATATGCCTGACAGGATGCTGCAGTGGTaGCTGATATTCCCAGTTATT | + |
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Preference number: 3 (lower is better) Translates to: LEDWPIWSIEVKSIDMPDRMLQW*LIFPVI Trigger: AATAACTGGGAATATCAGCAACCACTGCAGCATCCT...GTCAGGCATATCAATGCTTTTAACTTCTATGGACCAGATTGGCCAATCTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR TCA 72 bp | CACTTGTATACAATGTGTATTCACAGTCTCATACTCTaGATACACTCCCTCCACCTTTTCACGTCTTATAAA | + |
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Preference number: 3 (lower is better) Translates to: HLYTMCIHSLIL*IHSLHLFTSYK Trigger: TTTATAAGACGTGAAAAGGTGGAGGGAGTGTATTCAGAGTATGAGACTGTGAATACACATTGTATACAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR TCA 90 bp | CTGTCAGCAGTCCCTTGCTGCCCATGTAGCCAAAGCAGCATTTGGTGGAACACTGCTCATCCTTGGTGGTaGAGTCCGGGTAAGGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSAVPCCPCSQSSIWWNTAHPWW*SPGKER Trigger: ACGCTCCTTACCCGGACTTCACCACCAAGGATGAGC...AGTGTTCCACCAAATGCTGCTTTGGCTACATGGGCAGCAAGGGACTGCTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR GCA 90 bp | TGCCTGCTGTGTCTCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCAACTTCACACTGGAACTaGCGGGCCAGCTCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CLLCLHLSDSGVQRASLPTSHWN*RASSSL Trigger: CAAGGATGAGCTGGCCCGGCAGTTCCAGTGTGAAGT...TGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGAGACACAGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CAA 72 bp | GTGTACAACGAGCCAGTCTGCCATCGGGACCCTCTCTaGGTAGCTCTGAGGATGCTGCAGTGGTTGCTGATA | + |
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Preference number: 4 (lower is better) Translates to: VYNEPVCHRDPL*VALRMLQWLLI Trigger: TATCAGCAACCACTGCAGCATCCTCAGAGCTACCAAGAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CAA 72 bp | TACTCTGGGGAACATGATGTCAGACCTCCCTCAGACTaGGAGCCACTGAGAAGGTCAAAGCCCCTTAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YSGEHDVRPPSD*EPLRRSKPLRL Trigger: CAGCCTAAGGGGCTTTGACCTTCTCAGTGGCTCCAAGTCTGAGGGAGGTCTGACATCATGTTCCCCAGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CAA 72 bp | GACCCTCTCTTGGTAGCTCTGAGGATGCTGCAGTGGTaGCTGATATTCCCAGTTATTCTGCTGCTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: DPLLVALRMLQW*LIFPVILLLSW Trigger: CCAGGACAGCAGCAGAATAACTGGGAATATCAGCAACCACTGCAGCATCCTCAGAGCTACCAAGAGAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR TCA 90 bp | AGGTCAAAGCCCCTTAGGCTGCCACTGGCTACTGAGGCCCTGGAGGCTGGATTGTTTATGTCTCGGTTTTaGGTTTCTGCTTCCATATCG | + |
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Preference number: 4 (lower is better) Translates to: RSKPLRLPLATEALEAGLFMSRF*VSASIS Trigger: CGATATGGAAGCAGAAACTCAAAACCGAGACATAAA...CAATCCAGCCTCCAGGGCCTCAGTAGCCAGTGGCAGCCTAAGGGGCTTTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR TCA 90 bp | CAACGAGCCAGTCTGCCATCGGGACCCTCTCTTGGTAGCTCTGAGGATGCTGCACTGGCTCTTTTATTCTaGAACCAGTTGTCAATCACG | + |
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Preference number: 4 (lower is better) Translates to: QRASLPSGPSLGSSEDAALALLF*NQLSIT Trigger: CGTGATTGACAACTGGTTTCAGAATAAAAGAGCCAG...TGCAGCATCCTCAGAGCTACCAAGAGAGGGTCCCGATGGCAGACTGGCTCGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR TCA 90 bp | TGGGAACCCTGGATCTTTGTTGAGACTCCTGGACTCCACTTTAGCCCCTCATGCGACCACAGAGTCACATaGGCTGTACTGTTCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: WEPWIFVETPGLHFSPSCDHRVT*AVLFTR Trigger: TCTGGTGAACAGTACAGCTCATGTGACTCTGTGGTC...GCATGAGGGGCTAAAGTGGAGTCCAGGAGTCTCAACAAAGATCCAGGGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CCA 90 bp | CCAGTCTGCCATCGGGACCCTCTCTTGGTAGCTCTGAGGATGCTGCAGTGGTTGGAGAATGTGAAATATTaGGTTTCCTGTGTCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PVCHRDPLLVALRMLQWLENVKY*VSCVSS Trigger: GCTTGAGACACAGGAAACCCAATATTTCACATTCTC...CAACCACTGCAGCATCCTCAGAGCTACCAAGAGAGGGTCCCGATGGCAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CAA 72 bp | GATATTCCCAGTTATTCTGCTGCTGTCCTGGGAGCATaGGGGAACAGTTACAATCCACCCACCTTTGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: DIPSYSAAVLGA*GNSYNPPTFAP Trigger: AGGGGCAAAGGTGGGTGGATTGTAACTGTTCCCCAATGCTCCCAGGACAGCAGCAGAATAACTGGGAATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR TCA 90 bp | CTTATTTGCCTATTTGGCCAAATGAGCACTGGCTCTCTGGATAACTCTCTCCACCTCCACAGTGCCAATTaGTTGCCTTCCGATGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LICLFGQMSTGSLDNSLHLHSAN*LPSDAS Trigger: CGAAGCATCGGAAGGCAATCAATTGGCACTGTGGAG...GTGGAGAGAGTTATCCAGAGAGCCAGTGCTCATTTGGCCAAATAGGCAAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR GCA 90 bp | TCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCATCGGGACCCTCTCGCTTTTCAATTCTGGTaGCAATCTGGCTCTTTTATT | + |
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Preference number: 4 (lower is better) Translates to: SISLTLVYNEPVCHRDPLAFQFW*QSGSFI Trigger: AATAAAAGAGCCAGATTGGCACCAGAATTGAAAAGC...GAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CCA 90 bp | GATGTCAGACCTCCCTCAGACTTGGAGCCACTGAGAAGGTCAAAGCCCCTTAGGATTCTGGTGCCAATCTaGCTCTTTTATTCTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: DVRPPSDLEPLRRSKPLRILVPI*LFYSET Trigger: GGTTTCAGAATAAAAGAGCCAGATTGGCACCAGAAT...CCTAAGGGGCTTTGACCTTCTCAGTGGCTCCAAGTCTGAGGGAGGTCTGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CCA 90 bp | TCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCATCGGGACCCTCTCTTTGCTTTTCAATTCTaGTGCCAATCTGGCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SISLTLVYNEPVCHRDPLFAFQF*CQSGSF Trigger: AAAAGAGCCAGATTGGCACCAGAATTGAAAAGCAAA...GAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| 3UTR CAA 72 bp | TCTTCTAGAATCACTCATGGGAACCCTGGATCTTTGTaGAGACTCCTGGACTCCACTTTAGCCCCTCATGCT | + |
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Preference number: 4 (lower is better) Translates to: SSRITHGNPGSL*RLLDSTLAPHA Trigger: AGCATGAGGGGCTAAAGTGGAGTCCAGGAGTCTCAACAAAGATCCAGGGTTCCCATGAGTGATTCTAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR GCA 90 bp | CTGTCAGCAGTCCCTTGCTGCCCATGTAGCCAAAGCAGCATTTGGTGGAACACTTCGGTTTTGAGTTTCTaGTTCCATATCGCTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSAVPCCPCSQSSIWWNTSVLSF*FHIAFL Trigger: CAAGAAAGCGATATGGAAGCAGAAACTCAAAACCGA...AGTGTTCCACCAAATGCTGCTTTGGCTACATGGGCAGCAAGGGACTGCTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CCA 90 bp | GTAGCTCTGAGGATGCTGCAGTGGTTGCTGATATTCCCAGTTATTCTGCTGCTGTGCGCATTCTTCTCATaGCAGAAATTTTGCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: VALRMLQWLLIFPVILLLCAFFS*QKFCFS Trigger: TGAAAAGCAAAATTTCTGCCATGAGAAGAATGCGCA...CAGCAGCAGAATAACTGGGAATATCAGCAACCACTGCAGCATCCTCAGAGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR GCA 90 bp | CTAGAAGATTGGCCAATCTGGTCCATAGAAGTTAAAAGCATTGATATGCCTGACTCATGGCAGAAATTTTaGTTTTCAATTCTGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LEDWPIWSIEVKSIDMPDSWQKF*FSILVP Trigger: TGGCACCAGAATTGAAAAGCAAAATTTCTGCCATGA...GTCAGGCATATCAATGCTTTTAACTTCTATGGACCAGATTGGCCAATCTTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CAA 90 bp | TCCATCTCTCTGACTCTGGTGTACAACGAGCCAGTCTGCCATCGGGACCCTCTCTATCGCTTTCTTGCTTaGCTGCGATTGTCTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SISLTLVYNEPVCHRDPLYRFLA*LRLSFV Trigger: AACAAAAGACAATCGCAGCAAAGCAAGAAAGCGATA...GAGAGGGTCCCGATGGCAGACTGGCTCGTTGTACACCAGAGTCAGAGAGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CAA 90 bp | CTAGAAGATTGGCCAATCTGGTCCATAGAAGTTAAAAGCATTGATATGCCTGACAGAGAATGTGAAATATaGGGTTTCCTGTGTCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LEDWPIWSIEVKSIDMPDRECEI*GFLCLK Trigger: CTTGAGACACAGGAAACCCAATATTTCACATTCTCT...GTCAGGCATATCAATGCTTTTAACTTCTATGGACCAGATTGGCCAATCTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CAA 90 bp | ATAATAACCTCCAGGTTAACAAGGGTAAACTTCTTATTTGCCTATTTGGCCAAAAGCGTATGCAAATTCTaGTTTAAGTCTCTTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: IITSRLTRVNFLFAYLAKSVCKF*FKSLQL Trigger: GAGCTGAAGAGACTTAAACAAGAATTTGCATACGCT...TTTGGCCAAATAGGCAAATAAGAAGTTTACCCTTGTTAACCTGGAGGTTATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS-3UTR CAA 90 bp | AACGTAACACTTGTATACAATGTGTATTCACAGTCTCATACTCTGAATACACTCATTTATGTCTCGGTTTaGAGTTTCTGCTTCCATATC | + |
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Preference number: 5 (lower is better) Translates to: NVTLVYNVYSQSHTLNTLIYVSV*SFCFHI Trigger: GATATGGAAGCAGAAACTCAAAACCGAGACATAAAT...GAGTGTATTCAGAGTATGAGACTGTGAATACACATTGTATACAAGTGTTACGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS GCA 72 bp | AACCAGTTGTCAATCACGCTCACTTCACACTGGAACTaGCGGGCCAGCTCATCCTTGGTGGTGAAGTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: NQLSITLTSHWN*RASSSLVVKSG Trigger: CCCGGACTTCACCACCAAGGATGAGCTGGCCCGGCAGTTCCAGTGTGAAGTGAGCGTGATTGACAACTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS GCA 72 bp | AAGATTCCCTTCCAGCGGCCCCTTGATGCTCCACAGTaGCAATTGATTGCCTTCCGATGCTTCGGACCACAG | + |
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Preference number: 6 (lower is better) Translates to: KIPFQRPLDAPQ*QLIAFRCFGPQ Trigger: CTGTGGTCCGAAGCATCGGAAGGCAATCAATTGGCACTGTGGAGCATCAAGGGGCCGCTGGAAGGGAATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS TCA 72 bp | CACACTGGAACTGCCGGGCCAGCTCATCCTTGGTGGTaGAGTCCGGGTAAGGAGCGTATGCAAATTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: HTGTAGPAHPWW*SPGKERMQILV Trigger: AACAAGAATTTGCATACGCTCCTTACCCGGACTTCACCACCAAGGATGAGCTGGCCCGGCAGTTCCAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS GCA 72 bp | CTCATCCTTGGTGGTGAAGTCCGGGTAAGGAGCGTATaGAAATTCTTGTTTAAGTCTCTTCAGCTCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: LILGGEVRVRSV*KFLFKSLQLIS Trigger: AGAGATGAGCTGAAGAGACTTAAACAAGAATTTGCATACGCTCCTTACCCGGACTTCACCACCAAGGATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS CAA 72 bp | GGTTTTGAGTTTCTGCTTCCATATCGCTTTCTTGCTTaGCTGCGATTGTCTTTTGTTTCTGGAGCGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GFEFLLPYRFLA*LRLSFVSGAPG Trigger: TCCTGGCGCTCCAGAAACAAAAGACAATCGCAGCAAAGCAAGAAAGCGATATGGAAGCAGAAACTCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS CAA 90 bp | CTCATCCTTGGTGGTGAAGTCCGGGTAAGGAGCGTATGCAAATTCTaGTTTAAGTCTCTTCAGCTCATCTCTGGAAAATTTATGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LILGGEVRVRSVCKF*FKSLQLISGKFMSR Trigger: CCGAGACATAAATTTTCCAGAGATGAGCTGAAGAGACTTAAACAAGAATTTGCATACGCTCCTTACCCGGACTTCACCACCAAGGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS TCA 72 bp | CTTTTCAATTCTGGTGCCAATCTGGCTCTTTTATTCTaGAACCAGTTGTCAATCACGCTCACTTCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: LFNSGANLALLF*NQLSITLTSHW Trigger: CCAGTGTGAAGTGAGCGTGATTGACAACTGGTTTCAGAATAAAAGAGCCAGATTGGCACCAGAATTGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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| CDS GCA 72 bp | CATCTCTGGAAAATTTATGTCTCGGTTTTGAGTTTCTaGTTCCATATCGCTTTCTTGCTTTGCTGCGATTGT | + |
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Preference number: 6 (lower is better) Translates to: HLWKIYVSVLSF*FHIAFLLCCDC Trigger: ACAATCGCAGCAAAGCAAGAAAGCGATATGGAAGCAGAAACTCAAAACCGAGACATAAATTTTCCAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184016.3 |
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