Pregenerated sensors for CPEB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020300Ensembl transcript IDs: ENSMUST00000020543.13, ENSMUST00000109412.9, ENSMUST00000155278.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCTGCTTTTCCTACAGACAGCAGAAGGGTCACCAGCCAGGCGGTaGCAGCACTGCAGGCAAGTCTTTGGTTCTGAAGGATCCAAGATG | + |
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Preference number: 1 (lower is better) Translates to: GLLFLQTAEGSPARR*QHCRQVFGSEGSKM Trigger: CATCTTGGATCCTTCAGAACCAAAGACTTGCCTGCAGTGCTGTCACCGCCTGGCTGGTGACCCTTCTGCTGTCTGTAGGAAAAGCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR GCA 90 bp | GTAGGTTGTTCTTTTCATTCTACCACTGATAGTTACACACTGCTGTaGAGGACATGCCAGTGTGAAGAGGCTGAGGAAGAGTTGGAATTA | + |
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Preference number: 1 (lower is better) Translates to: VGCSFHSTTDSYTLL*RTCQCEEAEEELEL Trigger: TAATTCCAACTCTTCCTCAGCCTCTTCACACTGGCATGTCCTGCACAGCAGTGTGTAACTATCAGTGGTAGAATGAAAAGAACAACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CCA 90 bp | TCATTCACTGCAAGTTTTATGTTGCATTCTGCAGAGGTCTGTGTATaGAGAAGTAAATATATTATACCAAAGCCAGGGGGCACGGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: SFTASFMLHSAEVCV*RSKYIIPKPGGTGR Trigger: CCTACCCGTGCCCCCTGGCTTTGGTATAATATATTTACTTCTCCATACACAGACCTCTGCAGAATGCAACATAAAACTTGCAGTGAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CCA 90 bp | TACATAGACTATTTCTTAAATTATAGGTACACCAGTAGCTGGTGCTaGGGAAGGATGTTTAAGCAACATGCTTTCTCTTCTCTGCAGACT | + |
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Preference number: 1 (lower is better) Translates to: YIDYFLNYRYTSSWC*GRMFKQHAFSSLQT Trigger: AGTCTGCAGAGAAGAGAAAGCATGTTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAAATAGTCTATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR TCA 90 bp | AGCAAAACAAGAGAATTAAAACCTGCATGCAACATAATGGCAATGTaGAATGGAGTTGAACATACTGTTTGCAGTGACACGAGAGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: SKTRELKPACNIMAM*NGVEHTVCSDTRVY Trigger: GTAGACTCTCGTGTCACTGCAAACAGTATGTTCAACTCCATTTCACATTGCCATTATGTTGCATGCAGGTTTTAATTCTCTTGTTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR TCA 90 bp | ACAAGGTATACAAAAGTAGTGCATAACAAATGTACATCATGTGCATaGCAAAATAAGTCAGCTACAGACACTGTACCGGAATTCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TRYTKVVHNKCTSCA*QNKSATDTVPEFSR Trigger: CCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACTTATTTTGTCATGCACATGATGTACATTTGTTATGCACTACTTTTGTATACCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CCA 90 bp | CACTGCAAAGATCTTCCAAAGTGTGAGATAAGTATTGCACATAACTaGAGTGAGCTTGCCACAATTCATCACATTCAAGTTTTAAATCAC | + |
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Preference number: 1 (lower is better) Translates to: HCKDLPKCEISIAHN*SELATIHHIQVLNH Trigger: GTGATTTAAAACTTGAATGTGATGAATTGTGGCAAGCTCACTCCAGTTATGTGCAATACTTATCTCACACTTTGGAAGATCTTTGCAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CCA 90 bp | AAGTTCAGAGTAATAGATAATCATTGTTTATGCCCTGTAAAGAAGTaGAACCAAATCATCTGTAAACACGCTTGTCACACAATCACAAGT | + |
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Preference number: 1 (lower is better) Translates to: KFRVIDNHCLCPVKK*NQIICKHACHTITS Trigger: ACTTGTGATTGTGTGACAAGCGTGTTTACAGATGATTTGGTTCCACTTCTTTACAGGGCATAAACAATGATTATCTATTACTCTGAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CAA 90 bp | CCTCCACCACACAGCTGCTCCGCTGTTCTGTTAGCAGGGGATTCTTaGACAGTGGCTCCCTCTTTCTGTTGGACTCTTAGACAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PPPHSCSAVLLAGDS*TVAPSFCWTLRQQV Trigger: CACTTGCTGTCTAAGAGTCCAACAGAAAGAGGGAGCCACTGTCAAAGAATCCCCTGCTAACAGAACAGCGGAGCAGCTGTGTGGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGGCAAGAGCACTTTCCTaGGGGAGACTGTGTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKARALS*GRLCQN Trigger: GTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGC...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATCACCAGCCAGGCGGTaGCAGCACTGCAGGCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQSPARR*QHCRQV Trigger: GACTTGCCTGCAGTGCTGTCACCGCCTGGCTGGTGA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGATGGAGAGCAAAGGCTaGCACCTGATGACTGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKMESKG*HLMTVS Trigger: ACTAACAGTCATCAGGTGTCAGCCTTTGCTCTCCAT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGCAAAAGTTACTTCCATaGCCGGGGCTTCAAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKQKLLP*PGLQET Trigger: AGTCTCTTGAAGCCCCGGTCATGGAAGTAACTTTTG...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGAGTTACACACTGCTGTaGAGGACATGCCAGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKSYTLL*RTCQCE Trigger: TTCACACTGGCATGTCCTGCACAGCAGTGTGTAACT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGGCTCCCTCTTTCTGTTaGACTCTTAGACAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKAPSFC*TLRQQV Trigger: CACTTGCTGTCTAAGAGTCCAACAGAAAGAGGGAGC...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTTCTGAGGCCTGCAAATaGGCTCTGGAGTCATTCATT | + |
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Preference number: 2 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTSEACK*ALESFI Trigger: AATGAATGACTCCAGAGCTCATTTGCAGGCCTCAGA...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTCTGCTGTGCAGGACATaGCAGTGTGAAGAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGLLCRT*QCEEAE Trigger: CTCAGCCTCTTCACACTGGCATGTCCTGCACAGCAG...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGTACACTGCTCAATCTTaGTCATGCATTTGCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKYTAQS*SCICLL Trigger: GAGCAAGCAAATGCATGAGCAAGATTGAGCAGTGTA...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGAAGTTTAGATCCTCTTaGCCTCCAGCAAAACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKKFRSS*PPAKQE Trigger: CTCTTGTTTTGCTGGAGGCCAAGAGGATCTAAACTT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTAGAGGGCACTTCTTCTaGGGCCTGCAAATGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGRGHFF*GLQMSS Trigger: AGAGCTCATTTGCAGGCCTCAGAAGAAGTGCCCTCT...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTCTGCTGTGCAGGACATaGCAGTGTGAAGAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LFFCSPPEIINSSFGRFPLLCRT*QCEEAE Trigger: CTCAGCCTCTTCACACTGGCATGTCCTGCACAGCAG...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTGCAAGAGCACTTTCCTaGGGGAGACTGTGTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGARALS*GRLCQN Trigger: GTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGC...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTAGAGGGCACTTCTTCTaGGGCCTGCAAATGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LFFCSPPEIINSSFGRFPRGHFF*GLQMSS Trigger: AGAGCTCATTTGCAGGCCTCAGAAGAAGTGCCCTCT...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTGGTTTCCTGGGGCCGTaGTTAGGAAGTCAGTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: GKQGQWAADLYVVFNLPVGFLGP*LGSQLN Trigger: ATTTAACTGACTTCCTAATCACGGCCCCAGGAAACC...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATAGTTACACACTGCTGTaGAGGACATGCCAGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYSYTLL*RTCQCE Trigger: TTCACACTGGCATGTCCTGCACAGCAGTGTGTAACT...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTGGTTTCCTGGGGCCGTaGTTAGGAAGTCAGTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGGFLGP*LGSQLN Trigger: ATTTAACTGACTTCCTAATCACGGCCCCAGGAAACC...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTTCTCCTCTAAGAAAATaGTACAGCAAGTTTAGATCC | + |
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Preference number: 2 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTSPLRK*YSKFRS Trigger: GGATCTAAACTTGCTGTAGCATTTTCTTAGAGGAGA...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGAACCATACGGACTTTTaGACAGATTTACACAATTAC | + |
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Preference number: 2 (lower is better) Translates to: SQLQTLYRNSAGRVQREKNHTDF*TDLHNY Trigger: GTAATTGTGTAAATCTGTGCAAAAGTCCGTATGGTT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGCTCCCTCTTTCTGTTaGACTCTTAGACAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQAPSFC*TLRQQV Trigger: CACTTGCTGTCTAAGAGTCCAACAGAAAGAGGGAGC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CAA 90 bp | AGCACAGCTAGCAAGACTGCACTTAGACTGCTGCTGTTAAATGCTTaGCACACTGATAGTAATCCTTTGAACTACGGTAGGGCATTTAAT | + |
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Preference number: 2 (lower is better) Translates to: STASKTALRLLLLNA*HTDSNPLNYGRAFN Trigger: ATTAAATGCCCTACCGTAGTTCAAAGGATTACTATCAGTGTGCAAAGCATTTAACAGCAGCAGTCTAAGTGCAGTCTTGCTAGCTGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTTCTGAGGCCTGCAAATaGGCTCTGGAGTCATTCATT | + |
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Preference number: 2 (lower is better) Translates to: LFFCSPPEIINSSFGRFPSEACK*ALESFI Trigger: AATGAATGACTCCAGAGCTCATTTGCAGGCCTCAGA...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTAAGGCATTTGAGGCATaGTCAAGCTATCATCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGKAFEA*SSYHQP Trigger: AGGCTGATGATAGCTTGATCATGCCTCAAATGCCTT...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGCAAGTCTTTGGTTCTaGAGGATCCAAGATGGTACT | + |
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Preference number: 2 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQASLWF*RIQDGT Trigger: AGTACCATCTTGGATCCTTCAGAACCAAAGACTTGC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTGCTCATGCATTTGCTTaGTCTGACATACTCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GKQGQWAADLYVVFNLPVAHAFA*SDILFP Trigger: AGGAAAGAGTATGTCAGAGCAAGCAAATGCATGAGC...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATAAGTTTAGATCCTCTTaGCCTCCAGCAAAACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYKFRSS*PPAKQE Trigger: CTCTTGTTTTGCTGGAGGCCAAGAGGATCTAAACTT...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGCTCATGCATTTGCTTaGTCTGACATACTCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQAHAFA*SDILFP Trigger: AGGAAAGAGTATGTCAGAGCAAGCAAATGCATGAGC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CAA 90 bp | GCCTCAAAGCTCTTATGGTTACACTGCTCAATCTTGCTCATGCATTaGCTTGCTCTGACATACTCTTTCCTGTTAATAACTGTTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: ASKLLWLHCSILLMH*LALTYSFLLITVNF Trigger: GAAGTTAACAGTTATTAACAGGAAAGAGTATGTCAGAGCAAGCAAATGCATGAGCAAGATTGAGCAGTGTAACCATAAGAGCTTTGAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTTACACTGCTCAATCTTaGTCATGCATTTGCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LFFCSPPEIINSSFGRFPYTAQS*SCICLL Trigger: GAGCAAGCAAATGCATGAGCAAGATTGAGCAGTGTA...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTGCCTCAAAGCTCTTATaGTTACACTGCTCAATCTTG | + |
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Preference number: 2 (lower is better) Translates to: LFFCSPPEIINSSFGRFPASKLL*LHCSIL Trigger: CAAGATTGAGCAGTGTAACCATAAGAGCTTTGAGGC...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATTAAAAATAAAGGGCTaGTTTTCCTACAGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQLKIKG*FSYRQQ Trigger: CTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGAAAAATTGAGGTATTaGATAAAGAGATATCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQEKLRY*IKRYPV Trigger: GACGGGATATCTCTTTATGCAATACCTCAATTTTTC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR CAA 90 bp | CTTAGACTGCTGCTGTTAAATGCTTTGCACACTGATAGTAATCCTTaGAACTACGGTAGGGCATTTAATAAGAGAATGTCAATTAAACCA | + |
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Preference number: 2 (lower is better) Translates to: LRLLLLNALHTDSNP*NYGRAFNKRMSIKP Trigger: TGGTTTAATTGACATTCTCTTATTAAATGCCCTACCGTAGTTCAAAGGATTACTATCAGTGTGCAAAGCATTTAACAGCAGCAGTCTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR GCA 72 bp | CAGCTACACGAGAGACAGCACCCTCCACCACACAGCTaGTCCGCTGTTCTGTTAGCAGGGGATTCTTTGACA | + |
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Preference number: 3 (lower is better) Translates to: QLHERQHPPPHS*SAVLLAGDSLT Trigger: TGTCAAAGAATCCCCTGCTAACAGAACAGCGGAGCAGCTGTGTGGTGGAGGGTGCTGTCTCTCGTGTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| 3UTR TCA 72 bp | CAGGCGGTGACAGCACTGCAGGCAAGTCTTTGGTTCTaGAGGATCCAAGATGGTACTGTTAGGCAGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QAVTALQASLWF*RIQDGTVRQHS Trigger: GCTGTGCTGCCTAACAGTACCATCTTGGATCCTTCAGAACCAAAGACTTGCCTGCAGTGCTGTCACCGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGACTGCAGGCAAGTCTTaGGTTCTGAAGGATCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQLQTLYRNSAGRVQREKTAGKS*VLKDPR Trigger: TCTTGGATCCTTCAGAACCAAAGACTTGCCTGCAGT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR GCA 72 bp | TCTACCACTGATAGTTACACACTGCTGTGCAGGACATaGCAGTGTGAAGAGGCTGAGGAAGAGTTGGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: STTDSYTLLCRT*QCEEAEEELEL Trigger: TAATTCCAACTCTTCCTCAGCCTCTTCACACTGGCATGTCCTGCACAGCAGTGTGTAACTATCAGTGGTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR GCA 72 bp | TCTTTTCATTCTACCACTGATAGTTACACACTGCTGTaGAGGACATGCCAGTGTGAAGAGGCTGAGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFHSTTDSYTLL*RTCQCEEAEEE Trigger: CTCTTCCTCAGCCTCTTCACACTGGCATGTCCTGCACAGCAGTGTGTAACTATCAGTGGTAGAATGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR GCA 72 bp | GTTGTTCTTTTCATTCTACCACTGATAGTTACACACTaGTGTGCAGGACATGCCAGTGTGAAGAGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VVLFILPLIVTH*CAGHASVKRLR Trigger: CCTCAGCCTCTTCACACTGGCATGTCCTGCACAGCAGTGTGTAACTATCAGTGGTAGAATGAAAAGAACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTGAGGCTGAGGAAGAGTaGGAATTAACAAAAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKQGQWAADLYVVFNLPVEAEEE*ELTKEG Trigger: GCCCTCTTTTGTTAATTCCAACTCTTCCTCAGCCTC...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGTACCTATGTTGTAGGTaGTTCTTTTCATTCTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQLQTLYRNSAGRVQREKYLCCR*FFSFYH Trigger: GTGGTAGAATGAAAAGAACAACCTACAACATAGGTA...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGCAGCCGATCTGTATGTaGTTTTTAATCTTCCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SQLQTLYRNSAGRVQREKQPICM*FLIFQF Trigger: AAACTGGAAGATTAAAAACAACATACAGATCGGCTG...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATCATTAATTCTAGCTTaGGTAGGTTTCCTGGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQSLILA*VGFLGP Trigger: CGGCCCCAGGAAACCTACCAAAGCTAGAATTAATGA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTACTGCAGGCAAGTCTTaGGTTCTGAAGGATCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGTAGKS*VLKDPR Trigger: TCTTGGATCCTTCAGAACCAAAGACTTGCCTGCAGT...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR GCA 72 bp | AAGCTATCATCAGCCTCAAAGCTCTTATGGTTACACTaGTCAATCTTGCTCATGCATTTGCTTGCTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: KLSSASKLLWLH*SILLMHLLALT Trigger: TGTCAGAGCAAGCAAATGCATGAGCAAGATTGAGCAGTGTAACCATAAGAGCTTTGAGGCTGATGATAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR CCA 72 bp | GGCATGATCAAGCTATCATCAGCCTCAAAGCTCTTATaGTTACACTGCTCAATCTTGCTCATGCATTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GMIKLSSASKLL*LHCSILLMHLL Trigger: AAGCAAATGCATGAGCAAGATTGAGCAGTGTAACCATAAGAGCTTTGAGGCTGATGATAGCTTGATCATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR CCA 72 bp | GCAAGTTTTATGTTGCATTCTGCAGAGGTCTGTGTATaGAGAAGTAAATATATTATACCAAAGCCAGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASFMLHSAEVCV*RSKYIIPKPGG Trigger: GCCCCCTGGCTTTGGTATAATATATTTACTTCTCCATACACAGACCTCTGCAGAATGCAACATAAAACTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTTTACACTGCTCAATCTaGCTCATGCATTTGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGLHCSI*LMHLLA Trigger: AGCAAGCAAATGCATGAGCAAGATTGAGCAGTGTAA...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTTTACACTGCTCAATCTaGCTCATGCATTTGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LFFCSPPEIINSSFGRFPLHCSI*LMHLLA Trigger: AGCAAGCAAATGCATGAGCAAGATTGAGCAGTGTAA...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR GCA 72 bp | GACTATTTCTTAAATTATAGGTACACCAGTAGCTGGTaGTGGGGAAGGATGTTTAAGCAACATGCTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DYFLNYRYTSSW*WGRMFKQHAFS Trigger: AGAGAAAGCATGTTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAAATAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATACCTATGTTGTAGGTaGTTCTTTTCATTCTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQYLCCR*FFSFYH Trigger: GTGGTAGAATGAAAAGAACAACCTACAACATAGGTA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTCATTACTTGATGAAGTaGGCACTTCAAACACTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGHYLMK*ALQTLC Trigger: ACATAGTGTTTGAAGTGCCAACTTCATCAAGTAATG...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR TCA 72 bp | AGAGAATTAAAACCTGCATGCAACATAATGGCAATGTaGAATGGAGTTGAACATACTGTTTGCAGTGACACG | + |
|
Preference number: 3 (lower is better) Translates to: RELKPACNIMAM*NGVEHTVCSDT Trigger: CGTGTCACTGCAAACAGTATGTTCAACTCCATTTCACATTGCCATTATGTTGCATGCAGGTTTTAATTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR CCA 72 bp | ATAGACTATTTCTTAAATTATAGGTACACCAGTAGCTaGTGCTGGGGAAGGATGTTTAAGCAACATGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IDYFLNYRYTSS*CWGRMFKQHAF Trigger: GAAAGCATGTTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAAATAGTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR CCA 72 bp | GATCTTCCAAAGTGTGAGATAAGTATTGCACATAACTaGAGTGAGCTTGCCACAATTCATCACATTCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: DLPKCEISIAHN*SELATIHHIQV Trigger: AACTTGAATGTGATGAATTGTGGCAAGCTCACTCCAGTTATGTGCAATACTTATCTCACACTTTGGAAGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR TCA 72 bp | ACAAAAGTAGTGCATAACAAATGTACATCATGTGCATaGCAAAATAAGTCAGCTACAGACACTGTACCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TKVVHNKCTSCA*QNKSATDTVPE Trigger: TTCCGGTACAGTGTCTGTAGCTGACTTATTTTGTCATGCACATGATGTACATTTGTTATGCACTACTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR TCA 72 bp | TTACATGGTAACTCCCAGCTACAATCCCATGTAATCTaGAGGACATGTAATCATAAAGTTCAGAGTAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LHGNSQLQSHVI*RTCNHKVQSNR Trigger: TCTATTACTCTGAACTTTATGATTACATGTCCTTCAGATTACATGGGATTGTAGCTGGGAGTTACCATGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGAGGCTGACCCAGCACTaGTGCCATTGGCAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKRLTQH*CHWQLC Trigger: ACACAGCTGCCAATGGCAGCAGTGCTGGGTCAGCCT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGATGTCAAGGGTTGGGTaGAAGTCCCGAGACCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKMSRVG*KSRDRW Trigger: CCACCGGTCTCGGGACTTCCACCCAACCCTTGACAT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTCCCCATTCTGGTGAGTaGAGCAGTGAGGTGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTPHSGE*SSEVTP Trigger: TGGGGTCACCTCACTGCTTCACTCACCAGAATGGGG...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTCTGGATGTCAAGGGTTaGGTGGAAGTCCCGAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTLDVKG*VEVPRP Trigger: CGGTCTCGGGACTTCCACCCAACCCTTGACATCCAG...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGGGGACCCCTCCCTGGTaGAAGAAACTTGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKGTPPW*KKLASS Trigger: TGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCC...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGTGGGTCAAGTGGCTGTaGGCCATCCATCACAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKWVKWL*AIHHKV Trigger: GACTTTGTGATGGATGGCTCACAGCCACTTGACCCA...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGCTGCCAGCACGAGAGTaGATAGCAGCCCAGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKLPARE*IAAQQY Trigger: ATATTGCTGGGCTGCTATTCACTCTCGTGCTGGCAG...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGCTGACCCAGCACTGCTaGCATTGGCAGCTGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKLTQHC*HWQLCY Trigger: ATAACACAGCTGCCAATGGCAGCAGTGCTGGGTCAG...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTCAGCGGAATGAAATATaGCGAGGGCGGTCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTQRNEI*RGRSPP Trigger: AGGTGGTGACCGCCCTCGGCATATTTCATTCCGCTG...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATGAGAGAGGCCCGATCTaGGGGGAGAAGCTACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYERGPI*GEKLPP Trigger: TGGTGGTAGCTTCTCCCCTCAGATCGGGCCTCTCTC...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGTTTTGGAGCAAAGGCTaGGCTAGGGCGAGCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKFWSKG*ARASIL Trigger: AAGTATGCTCGCCCTAGCTCAGCCTTTGCTCCAAAA...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTAGTGAAGCAGTGAGGTaGCCCCAGACCACTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTSEAVR*PQTTMK Trigger: CTTCATAGTGGTCTGGGGTCACCTCACTGCTTCACT...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTCTGCCAGCACGAGAGTaGATAGCAGCCCAGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTLPARE*IAAQQY Trigger: ATATTGCTGGGCTGCTATTCACTCTCGTGCTGGCAG...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGACCAGTAAGGGACGATaGACTGGATGTCAAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKTSKGR*TGCQGL Trigger: CAACCCTTGACATCCAGTGCATCGTCCCTTACTGGT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTTTTTGGAGCAAAGGCTaGGCTAGGGCGAGCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTFWSKG*ARASIL Trigger: AAGTATGCTCGCCCTAGCTCAGCCTTTGCTCCAAAA...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGCTCGGGGAGAGCTGTTaGTTTTCTAAAGGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKLGESC*FSKGSC Trigger: ACAAGACCCTTTAGAAAAGCAACAGCTCTCCCCGAG...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTAAGGACTCTGGTAGCTaGTCCATGGAGAAGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTKDSGS*SMEKEV Trigger: AACCTCCTTCTCCATGGAGCAGCTACCAGAGTCCTT...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTCACCGTTCAGCCCTCTaGGGTGATCCCGGCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPHRSAL*GDPGLE Trigger: CTCAAGGCCGGGATCACCGCAGAGGGCTGAACGGTG...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTTGGAGGCTGCAGATGTaGATGGAATCGGACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTWRLQM*MESDWK Trigger: TTTCCAGTCCGATTCCATCCACATCTGCAGCCTCCA...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGGGGTGGCATTTTGGTaGTGGTGTGGAGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQGVAFW*WCGGCR Trigger: TCTGCAGCCTCCACACCATCACCAAAATGCCACCCC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAAGTATTCCAGCTTCCTaGCCTGGACTCGGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQSIPAS*PGLGES Trigger: GCTCTCCCCGAGTCCAGGTCAGGAAGCTGGAATACT...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTGAGCTCTCCAGTGAGTaGATGTCAAACGTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKQGQWAADLYVVFNLPVELSSE*MSNVLG Trigger: CCCCAGGACGTTTGACATGCACTCACTGGAGAGCTC...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTCACCCACAAACACTTTaGGAGAGTATCGTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTHPQTL*ESIVPL Trigger: GAGTGGAACGATACTCTCGCAAAGTGTTTGTGGGTG...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTCAGCGGAATGAAATATaGCGAGGGCGGTCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GKQGQWAADLYVVFNLPVQRNEI*RGRSPP Trigger: AGGTGGTGACCGCCCTCGGCATATTTCATTCCGCTG...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGGTCATCCAAGACATATaGCTTAACCTCCACCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQTLYRNSAGRVQREKVIQDI*LNLHPF Trigger: AAACGGGTGGAGGTTAAGCCATATGTCTTGGATGAC...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTAGCACCATTATTAGCTaGAGCGCCAGGGACCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPSTIIS*SARDPS Trigger: GGAGGGGTCCCTGGCGCTTCAGCTAATAATGGTGCT...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTCCCCATTCTGGTGAGTaGAGCAGTGAGGTGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPPHSGE*SSEVTP Trigger: TGGGGTCACCTCACTGCTTCACTCACCAGAATGGGG...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTTGGGTCAAGTGGCTGTaGGCCATCCATCACAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKQGQWAADLYVVFNLPVWVKWL*AIHHKV Trigger: GACTTTGTGATGGATGGCTCACAGCCACTTGACCCA...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATTCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYSPCCS*TKRALI Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTCAGCAGGGTTGGGGGTaGCATTTTGGTGATGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGQQGWG*HFGDGV Trigger: CACACCATCACCAAAATGCCACCCCCAACCCTGCTG...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATGGAAGAAGAGGGGGTTaGAGAAGGACTCTGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYGRRGG*RRTLVA Trigger: AGCTACCAGAGTCCTTCTCCAACCCCCTCTTCTTCC...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATTTCACCAGGGGCTTGTaGAATTCTCTGCCAGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYFTRGL*NSLPAR Trigger: TCGTGCTGGCAGAGAATTCCACAAGCCCCTGGTGAA...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAAGTGAAGCAGTGAGGTaGCCCCAGACCACTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQSEAVR*PQTTMK Trigger: CTTCATAGTGGTCTGGGGTCACCTCACTGCTTCACT...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQSPCCS*TKRALI Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTTCAGTTCCAGCGGAATaGAATATGCCGAGGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPSVPAE*NMPRAV Trigger: GACCGCCCTCGGCATATTTCATTCCGCTGGAACTGA...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTGAGCTCTCCAGTGAGTaGATGTCAAACGTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPELSSE*MSNVLG Trigger: CCCCAGGACGTTTGACATGCACTCACTGGAGAGCTC...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATGGCTGCAGATGTGGATaGAATCGGACTGGAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYGCRCG*NRTGKA Trigger: TGCTTTTCCAGTCCGATTCCATCCACATCTGCAGCC...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATTCACCAGGGGCTTGTaGAATTCTCTGCCAGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQFTRGL*NSLPAR Trigger: TCGTGCTGGCAGAGAATTCCACAAGCCCCTGGTGAA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATCACCAAAGCCAGGGCTaGCATGATGGGGAAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYHQSQG*HDGENF Trigger: AAAATTTTCCCCATCATGTCAGCCCTGGCTTTGGTG...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTCACCCACAAACACTTTaGGAGAGTATCGTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GKQGQWAADLYVVFNLPVHPQTL*ESIVPL Trigger: GAGTGGAACGATACTCTCGCAAAGTGTTTGTGGGTG...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTAGGTGCTATCGCTGCTaGCCAGTTACTGAAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPRCYRC*PVTETS Trigger: ACTGGTTTCAGTAACTGGTCAGCAGCGATAGCACCT...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTCTCTCATTATGTCAATaGGTGAGCTCTCCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKQGQWAADLYVVFNLPVLSLCQ*VSSPVS Trigger: ACTCACTGGAGAGCTCACTCATTGACATAATGAGAG...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTTTCCCAGTATTGCTTTaGACTAGCACTCCAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGFPVLL*TSTPNP Trigger: CGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAA...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTATTTATTCCCAGTATTaGTTTGCACTAGCACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTIYSQY*FALALQ Trigger: TTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAAT...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTTCCGTTGCTGTTTTCTaGAGAACTGTCCCCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPSVAVF*RTVPWI Trigger: AATCCAGGGGACAGTTCTTCAGAAAACAGCAACGGA...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAACTCTCATTATGTCAATaGGTGAGCTCTCCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQLSLCQ*VSSPVS Trigger: ACTCACTGGAGAGCTCACTCATTGACATAATGAGAG...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGCACTGGTTTATCCTTaGTGGTTGGACTTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQALVYP*WLDLIH Trigger: GTGTATCAAGTCCAACCATCAAGGATAAACCAGTGC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGGAGCTGAATATGATTaGTTGCGAAATTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTGAEYD*LRNFSS Trigger: TGAAGAAAAATTTCGCAAGCAATCATATTCAGCTCC...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATATAAGATTTGCTCTCTaGCTTATGAGGCCAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYIRFAL*LMRPIH Trigger: GTGGATTGGCCTCATAAGGCAGAGAGCAAATCTTAT...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATGTGGAAAATAAGATTTaGTCTCTGCCTTATGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYVENKI*SLPYEA Trigger: GGCCTCATAAGGCAGAGAGCAAATCTTATTTTCCAC...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATTGGATGGAATCGGACTaGAAAAGCAGATTTATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYWMESD*KSRFIP Trigger: GGGAATAAATCTGCTTTTCCAGTCCGATTCCATCCA...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATCAGCACTGCTGCCATTaGCAGCTGTGTTATTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYQHCCH*QLCYYL Trigger: TAAATAATAACACAGCTGCCAATGGCAGCAGTGCTG...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGTCATCCAAGACATATaGCTTAACCTCCACCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQVIQDI*LNLHPF Trigger: AAACGGGTGGAGGTTAAGCCATATGTCTTGGATGAC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATCAATACATGCATCAATaGGAGCCTGAACAGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYQYMHQ*EPEQNF Trigger: AAAGTTCTGTTCAGGCTCTCATTGATGCATGTATTG...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTGCACTGGTTTATCCTTaGTGGTTGGACTTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPALVYP*WLDLIH Trigger: GTGTATCAAGTCCAACCATCAAGGATAAACCAGTGC...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTGTGGAAAATAAGATTTaGTCTCTGCCTTATGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGVENKI*SLPYEA Trigger: GGCCTCATAAGGCAGAGAGCAAATCTTATTTTCCAC...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTAGATTATTCGCCAAATaGGGCAGCTGGTTAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPRLFAK*GSWLKA Trigger: TGCTTTTAACCAGCTGCCTCATTTGGCGAATAATCT...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR TCA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTCAATACATGCATCAATaGGAGCCTGAACAGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGQYMHQ*EPEQNF Trigger: AAAGTTCTGTTCAGGCTCTCATTGATGCATGTATTG...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTGGAAACAATGAAGACTaGCCATTAATAAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKQGQWAADLYVVFNLPVGNNED*PLISRE Trigger: TTCTCTGCTTATTAATGGTCAGTCTTCATTGTTTCC...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155278.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTTTCCATCGGAAACAATaGAGACTGACCATTAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKQGQWAADLYVVFNLPVFHRKQ*RLTINK Trigger: CTTATTAATGGTCAGTCTTCATTGTTTCCGATGGAA...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATTGAAACAGCAGGAATaGATAGCCTTTTGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQLKQQE*IAFWWK Trigger: TTTCCACCAAAAGGCTATGCATTCCTGCTGTTTCAA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAACACTGGTGATTCAATaGGTAGTTTTTCTTTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQTLVIQ*VVFLFR Trigger: ACGGAAAAGAAAAACTACGCATTGAATCACCAGTGT...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTTTGAAACAGCAGGAATaGATAGCCTTTTGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFFCSPPEIINSSFGRFPLKQQE*IAFWWK Trigger: TTTCCACCAAAAGGCTATGCATTCCTGCTGTTTCAA...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAATCGCCCATAAGTCCTTaGTTTAATGGAATCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQSPISP*FNGIIF Trigger: GAAAATGATTCCATTAAAGCAAGGACTTATGGGCGA...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGGAGCTGAATATGATTaGTTGCGAAATTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQGAEYD*LRNFSS Trigger: TGAAGAAAAATTTCGCAAGCAATCATATTCAGCTCC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAGAATGCATAGCCTTTTaGTGGAAAATAAGATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQECIAF*WKIRFA Trigger: AGCAAATCTTATTTTCCACCAAAAGGCTATGCATTC...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| 3UTR CAA 72 bp | CTGCTGTTAAATGCTTTGCACACTGATAGTAATCCTTaGAACTACGGTAGGGCATTTAATAAGAGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLNALHTDSNP*NYGRAFNKRMS Trigger: TGACATTCTCTTATTAAATGCCCTACCGTAGTTCAAAGGATTACTATCAGTGTGCAAAGCATTTAACAGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS GCA 90 bp | TGTTATTCCACCGTTCAGCCCTCTGCGGTGATCCCGGCCTTGAGATaGTCCCCAGCCACCGTAGCCGCCACCTCCTGGGCTCCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CYSTVQPSAVIPALR*SPATVAATSWAPGR Trigger: TCTTCCTGGAGCCCAGGAGGTGGCGGCTACGGTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGCAGAGGGCTGAACGGTGGAATAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS CCA 90 bp | ATCCCGGCCTTGAGATGCTCCCCAGCCACCGTAGCCGCCACCTCCTaGGCTCCAGGAAGAAGAGGGGGTTGGAGAAGGACTCTGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPALRCSPATVAATS*APGRRGGWRRTLVA Trigger: AGCTACCAGAGTCCTTCTCCAACCCCCTCTTCTTCCTGGAGCCCAGGAGGTGGCGGCTACGGTGGCTGGGGAGCATCTCAAGGCCGGGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS GCA 90 bp | AAGGTGAGATTGAGTTCAGGGGTGTTATTCCACCGTTCAGCCCTCTaGGGTGATCCCGGCCTTGAGATGCTCCCCAGCCACCGTAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KVRLSSGVLFHRSAL*GDPGLEMLPSHRSR Trigger: GCGGCTACGGTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGCAGAGGGCTGAACGGTGGAATAACACCCCTGAACTCAATCTCACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS CCA 90 bp | GCCACCGTAGCCGCCACCTCCTGGGCTCCAGGAAGAAGAGGGGGTTaGAGAAGGACTCTGGTAGCTGCTCCATGGAGAAGGAGGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATVAATSWAPGRRGG*RRTLVAAPWRRRFV Trigger: AACAAACCTCCTTCTCCATGGAGCAGCTACCAGAGTCCTTCTCCAACCCCCTCTTCTTCCTGGAGCCCAGGAGGTGGCGGCTACGGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTGCGGTGATCCCGGCCTaGAGATGCTCCCCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GKQGQWAADLYVVFNLPVAVIPA*RCSPAT Trigger: GGTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGC...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS TCA 90 bp | ACACTTTGCGAGAGTATCGTTCCACTCTCTCCCCATTCTGGTGAGTaGAGCAGTGAGGTGACCCCAGACCACTATGAAGAGGTTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLCESIVPLSPHSGE*SSEVTPDHYEEVDP Trigger: GGGATCAACCTCTTCATAGTGGTCTGGGGTCACCTCACTGCTTCACTCACCAGAATGGGGAGAGAGTGGAACGATACTCTCGCAAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS CCA 90 bp | ACGATGCACTGGATGTCAAGGGTTGGGTGGAAGTCCCGAGACCGGTaGCTTCTTGGTAATCAAACCCTGTCAACACTGGTGATTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: TMHWMSRVGWKSRDR*LLGNQTLSTLVIQC Trigger: GCATTGAATCACCAGTGTTGACAGGGTTTGATTACCAAGAAGCCACCGGTCTCGGGACTTCCACCCAACCCTTGACATCCAGTGCATCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTCCCACAACGGGCCCCTaGACATTCATCACACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTPTTGP*TFITQL Trigger: CAGCTGTGTGATGAATGTCAAGGGGCCCGTTGTGGG...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS CCA 90 bp | CCAGGAAGAAGAGGGGGTTGGAGAAGGACTCTGGTAGCTGCTCCATaGAGAAGGAGGTTTGTTAAGATTATTCGCCAAATGAGGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRRGGWRRTLVAAP*RRRFVKIIRQMRQL Trigger: CAGCTGCCTCATTTGGCGAATAATCTTAACAAACCTCCTTCTCCATGGAGCAGCTACCAGAGTCCTTCTCCAACCCCCTCTTCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGACCACTATGAAGAGGTaGATCCCCACGGCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SQLQTLYRNSAGRVQREKTTMKR*IPTAII Trigger: GATGATGGCCGTGGGGATCAACCTCTTCATAGTGGT...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGCCACCCACAAACACTTaGCGAGAGTATCGTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SQLQTLYRNSAGRVQREKPPTNT*REYRST Trigger: AGTGGAACGATACTCTCGCAAAGTGTTTGTGGGTGG...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS TCA 90 bp | AGCCCTGTTCAAGCTATCTTCCATCCAGGATTTTGGAGCAAAGGCTaGGCTAGGGCGAGCATACTTCTGGAGCTGAATATGATTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPVQAIFHPGFWSKG*ARASILLELNMIAC Trigger: GCAAGCAATCATATTCAGCTCCAGAAGTATGCTCGCCCTAGCTCAGCCTTTGCTCCAAAATCCTGGATGGAAGATAGCTTGAACAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGAGCACTTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGAGACCGGTGGCTTCTaGGTAATCAAACCCTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WQEHFPGGDCVRTDDSVTETGGF*VIKPCQ Trigger: TTGACAGGGTTTGATTACCAAGAAGCCACCGGTCTC...AGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAAGTGCTCTTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAACTGGATGTCAAGGGTaGGGTGGAAGTCCCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQTGCQG*GGSPET Trigger: GGTCTCGGGACTTCCACCCAACCCTTGACATCCAGT...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTCCCACAACGGGCCCCTaGACATTCATCACACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGPTTGP*TFITQL Trigger: CAGCTGTGTGATGAATGTCAAGGGGCCCGTTGTGGG...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATTCCTTCACCAGGGGCTaGTGGAATTCTCTGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYSFTRG*WNSLPA Trigger: TGCTGGCAGAGAATTCCACAAGCCCCTGGTGAAGGA...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS TCA 90 bp | AAGAGAGCACCATTATTAGCTGAAGCGCCAGGGACCCCTCCCTGGTaGAAGAAACTTGCATCTTCATTGATTATAGTGGAGGAAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KRAPLLAEAPGTPPW*KKLASSLIIVEEEG Trigger: ACCTTCTTCCTCCACTATAATCAATGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCCTGGCGCTTCAGCTAATAATGGTGCTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGGATTTATTCCCAGTATaGCTTTGCACTAGCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQLQTLYRNSAGRVQREKDLFPV*LCTSTP Trigger: TGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATC...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTGTTGGGGGTGGCATTTaGGTGATGGTGTGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFFCSPPEIINSSFGRFPVGGGI*VMVWRL Trigger: CAGCCTCCACACCATCACCAAAATGCCACCCCCAAC...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAGCTACAGACACTGTACCGGAATTCAGCAGGCCGTGTACAAAGGGAAAAGGATTTTCTTCAGCTTTaGCCTTTTCAGTTTCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQLQTLYRNSAGRVQREKDFLQL*PFQFQA Trigger: TGCCTGAAACTGAAAAGGCAAAAGCTGAAGAAAATC...CTTTTCCCTTTGTACACGGCCTGCTGAATTCCGGTACAGTGTCTGTAGCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTACCACTATGAAGAGGTaGATCCCCACGGCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGTTMKR*IPTAII Trigger: GATGATGGCCGTGGGGATCAACCTCTTCATAGTGGT...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTTCCTTCACCAGGGGCTaGTGGAATTCTCTGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFFCSPPEIINSSFGRFPSFTRG*WNSLPA Trigger: TGCTGGCAGAGAATTCCACAAGCCCCTGGTGAAGGA...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTCCACCCACAAACACTTaGCGAGAGTATCGTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LFFCSPPEIINSSFGRFPPPTNT*REYRST Trigger: AGTGGAACGATACTCTCGCAAAGTGTTTGTGGGTGG...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATCACCACCAACAAATATaGTTTTCCGTGGGTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYHHQQI*FSVGQV Trigger: CACTTGACCCACGGAAAACAATATTTGTTGGTGGTG...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTTCTTCAAAGGTGAGATaGAGTTCAGGGGTGTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: GKQGQWAADLYVVFNLPVSSKVR*SSGVLF Trigger: GAATAACACCCCTGAACTCAATCTCACCTTTGAAGA...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTCACCACCAACAAATATaGTTTTCCGTGGGTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGHHQQI*FSVGQV Trigger: CACTTGACCCACGGAAAACAATATTTGTTGGTGGTG...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGGGGGAGACTGTGTCAGAACAGATGATAGTGTTACTGTTGGTGATTATCATGGAGAAGGAGGTTaGTTAAGATTATTCGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FPGGDCVRTDDSVTVGDYHGEGG*LRLFAK Trigger: TTTGGCGAATAATCTTAACAAACCTCCTTCTCCATG...ATAATCACCAACAGTAACACTATCATCTGTTCTGACACAGTCTCCCCCAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTGGAATGCATAGCCTTTaGGTGGAAAATAAGATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKQGQWAADLYVVFNLPVGMHSL*VENKIC Trigger: GCAAATCTTATTTTCCACCAAAAGGCTATGCATTCC...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAATTATAGGTACACCAGTAGCTGGTGCTGGGGAAGGATGTTTAAGCAAAGGGTCTTGTTGTTCTaGCTGTTGACTTTTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLNYRYTSSWCWGRMFKQRVLLF*LLTFCF Trigger: AAAGCAAAAAGTCAACAGCAAGAACAACAAGACCCT...TTGCTTAAACATCCTTCCCCAGCACCAGCTACTGGTGTACCTATAATTTAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109412.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTGGAATGCATAGCCTTTaGGTGGAAAATAAGATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGGMHSL*VENKIC Trigger: GCAAATCTTATTTTCCACCAAAAGGCTATGCATTCC...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | GGAAAACAAGGCCAATGGGCAGCCGATCTGTATGTTGTTTTTAATCTTCCAGTTAACAGAACTTTCATCTaGAAACAGCAGGAATGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GKQGQWAADLYVVFNLPVNRTFI*KQQECI Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGTTCTGTT...AACTGGAAGATTAAAAACAACATACAGATCGGCTGCCCATTGGCCTTGTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTAGCTATGTAACTCTGTaGATTAGAAAACGCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGSYVTL*IRKRDS Trigger: AGAGTCGCGTTTTCTAATCAACAGAGTTACATAGCT...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCCTGTGTTAAAAATAAAGGGCTGCTTTTCCTACAGACAGCAGAAGGGTAACAGAACTTTCATCTaGAAACAGCAGGAATGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LKPVLKIKGCFSYRQQKGNRTFI*KQQECI Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGTTCTGTT...ACCCTTCTGCTGTCTGTAGGAAAAGCAGCCCTTTATTTTTAACACAGGCTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTTCTGTTCCCCACCAGAAATCATTAATTCTAGCTTTGGTAGGTTTCCTAGCTATGTAACTCTGTaGATTAGAAAACGCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFFCSPPEIINSSFGRFPSYVTL*IRKRDS Trigger: AGAGTCGCGTTTTCTAATCAACAGAGTTACATAGCT...AGGAAACCTACCAAAGCTAGAATTAATGATTTCTGGTGGGGAACAGAAGAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS GCA 72 bp | ACCGTTCAGCCCTCTGCGGTGATCCCGGCCTTGAGATaGTCCCCAGCCACCGTAGCCGCCACCTCCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TVQPSAVIPALR*SPATVAATSWA Trigger: AGCCCAGGAGGTGGCGGCTACGGTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGCAGAGGGCTGAACGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS CAA 90 bp | CAGGGGTGTTATTCCACCGTTCAGCCCTCTGCGGTGATCCCGGCCTaGAGATGCTCCCCAGCCACCGTAGCCGCCACCTCCTGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGCYSTVQPSAVIPA*RCSPATVAATSWAP Trigger: TGGAGCCCAGGAGGTGGCGGCTACGGTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGCAGAGGGCTGAACGGTGGAATAACACCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS CAA 72 bp | TATTCCACCGTTCAGCCCTCTGCGGTGATCCCGGCCTaGAGATGCTCCCCAGCCACCGTAGCCGCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: YSTVQPSAVIPA*RCSPATVAATS Trigger: GGAGGTGGCGGCTACGGTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGCAGAGGGCTGAACGGTGGAATA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS CCA 72 bp | GCCGCCACCTCCTGGGCTCCAGGAAGAAGAGGGGGTTaGAGAAGGACTCTGGTAGCTGCTCCATGGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AATSWAPGRRGG*RRTLVAAPWRR Trigger: CCTTCTCCATGGAGCAGCTACCAGAGTCCTTCTCCAACCCCCTCTTCTTCCTGGAGCCCAGGAGGTGGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS GCA 72 bp | TTGAGTTCAGGGGTGTTATTCCACCGTTCAGCCCTCTaGGGTGATCCCGGCCTTGAGATGCTCCCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSGVLFHRSAL*GDPGLEMLPSH Trigger: GTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGCAGAGGGCTGAACGGTGGAATAACACCCCTGAACTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS CAA 72 bp | GAAACCAGTAAGGGACGATGCACTGGATGTCAAGGGTaGGGTGGAAGTCCCGAGACCGGTGGCTTCTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ETSKGRCTGCQG*GGSPETGGFLV Trigger: TACCAAGAAGCCACCGGTCTCGGGACTTCCACCCAACCCTTGACATCCAGTGCATCGTCCCTTACTGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS CAA 90 bp | CCAGTTACTGAAACCAGTAAGGGACGATGCACTGGATGTCAAGGGTaGGGTGGAAGTCCCGAGACCGGTGGCTTCTTGGTAATCAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: PVTETSKGRCTGCQG*GGSPETGGFLVIKP Trigger: GGGTTTGATTACCAAGAAGCCACCGGTCTCGGGACTTCCACCCAACCCTTGACATCCAGTGCATCGTCCCTTACTGGTTTCAGTAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
||
| CDS TCA 72 bp | GAGAGTATCGTTCCACTCTCTCCCCATTCTGGTGAGTaGAGCAGTGAGGTGACCCCAGACCACTATGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ESIVPLSPHSGE*SSEVTPDHYEE Trigger: CTCTTCATAGTGGTCTGGGGTCACCTCACTGCTTCACTCACCAGAATGGGGAGAGAGTGGAACGATACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS GCA 72 bp | GCTCTCATTATGTCAATGAGTGAGCTCTCCAGTGAGTaGATGTCAAACGTCCTGGGGCGTTCCGGAAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALIMSMSELSSE*MSNVLGRSGKG Trigger: TCCTTTTCCGGAACGCCCCAGGACGTTTGACATGCACTCACTGGAGAGCTCACTCATTGACATAATGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS CAA 72 bp | CAGCTCGTAATGGTCGAGGAACACCACCAACAAATATaGTTTTCCGTGGGTCAAGTGGCTGTGAGCCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: QLVMVEEHHQQI*FSVGQVAVSHP Trigger: TGGATGGCTCACAGCCACTTGACCCACGGAAAACAATATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 ENSMUST00000155278.2 |
||
| CDS CAA 90 bp | CAAGCTCCACAGCTCGTAATGGTCGAGGAACACCACCAACAAATATaGTTTTCCGTGGGTCAAGTGGCTGTGAGCCATCCATCACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QAPQLVMVEEHHQQI*FSVGQVAVSHPSQS Trigger: ACTTTGTGATGGATGGCTCACAGCCACTTGACCCACGGAAAACAATATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| CDS TCA 72 bp | CAAGCTATCTTCCATCCAGGATTTTGGAGCAAAGGCTaGGCTAGGGCGAGCATACTTCTGGAGCTGAATATG | + |
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Preference number: 6 (lower is better) Translates to: QAIFHPGFWSKG*ARASILLELNM Trigger: CATATTCAGCTCCAGAAGTATGCTCGCCCTAGCTCAGCCTTTGCTCCAAAATCCTGGATGGAAGATAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 ENSMUST00000155278.2 |
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| CDS CCA 72 bp | AGAGGGGGTTGGAGAAGGACTCTGGTAGCTGCTCCATaGAGAAGGAGGTTTGTTAAGATTATTCGCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: RGGWRRTLVAAP*RRRFVKIIRQM Trigger: CATTTGGCGAATAATCTTAACAAACCTCCTTCTCCATGGAGCAGCTACCAGAGTCCTTCTCCAACCCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
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| CDS TCA 72 bp | CCATTATTAGCTGAAGCGCCAGGGACCCCTCCCTGGTaGAAGAAACTTGCATCTTCATTGATTATAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLLAEAPGTPPW*KKLASSLIIVE Trigger: CTCCACTATAATCAATGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCCTGGCGCTTCAGCTAATAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
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| CDS GCA 72 bp | GGAATCGGACTGGAAAAGCAGATTTATTCCCAGTATTaGTTTGCACTAGCACTCCAAACCCGTAATCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GIGLEKQIYSQY*FALALQTRNPP Trigger: TGGGGGATTACGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATCTGCTTTTCCAGTCCGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020543.13 ENSMUST00000109412.9 |
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