Pregenerated sensors for CPEB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025586Ensembl transcript IDs: ENSMUST00000098331.10, ENSMUST00000130310.8, ENSMUST00000178892.3
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCGCAAAGCTAGCTCCCATGGCGCCTGTGCAGCGAGTTGCTGCCTaGCTTGACAGCCTTTGGCACCACAGGACACTGGGCAAGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: CAKLAPMAPVQRVAA*LDSLWHHRTLGKAS Trigger: GCTGGCCTTGCCCAGTGTCCTGTGGTGCCAAAGGCTGTCAAGTCAGGCAGCAACTCGCTGCACAGGCGCCATGGGAGCTAGCTTTGCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR GCA 90 bp | CACACAGCTTCACAAAACCCACAGAGTAGCTGGGATATGCAACAATaGAACATCAGCTCAGCAGGAGGGAGGGGTTATGACACTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: HTASQNPQSSWDMQQ*NISSAGGRGYDTGS Trigger: AGAGCCAGTGTCATAACCCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTGGGTTTTGTGAAGCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR GCA 90 bp | AGACTTCACACACAGCTTCACAAAACCCACAGAGTAGCTGGGATATaGAACAATGCAACATCAGCTCAGCAGGAGGGAGGGGTTATGACA | + |
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Preference number: 1 (lower is better) Translates to: RLHTQLHKTHRVAGI*NNATSAQQEGGVMT Trigger: TGTCATAACCCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTGGGTTTTGTGAAGCTGTGTGTGAAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR CCA 90 bp | TTGATGCCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATaGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCA | + |
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Preference number: 1 (lower is better) Translates to: LMPFRWGLNQWKGTV*QLQNERTNETCASP Trigger: TGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGGCATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR GCA 90 bp | CACCACAGCTTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTaGATATACAACAATGAGGTAGAGACTTCACACACAGCTTCACAA | + |
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Preference number: 1 (lower is better) Translates to: HHSLLHTSVGECSLA*IYNNEVETSHTASQ Trigger: TTGTGAAGCTGTGTGTGAAGTCTCTACCTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAAGCTGTGGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR CCA 90 bp | CAGCTGAACACTCAATTGATGCCGTTCAGGTGGGGGTTAAATCAATaGAAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAG | + |
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Preference number: 1 (lower is better) Translates to: QLNTQLMPFRWGLNQ*KGTVWQLQNERTNE Trigger: CTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGGCATCAATTGAGTGTTCAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCGAGGGTCCTTGCTCTaGCACACCCCACTGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHRGSLL*HTPLKT Trigger: TGTTTTCAGTGGGGTGTGCCAGAGCAAGGACCCTCG...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTACGAGGGTCCTTGCTCTaGCACACCCCACTGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: WQLQNERTNETCASPPSVRGSLL*HTPLKT Trigger: TGTTTTCAGTGGGGTGTGCCAGAGCAAGGACCCTCG...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGGTAAGGAAGGGTATTTaGCCCTCTAAGAGAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: HRVAGICNNATSAQQEGGVRKGI*PSKRKG Trigger: GCCCTTTCTCTTAGAGGGGCAAATACCCTTCCTTAC...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGGGCACCACAGGACACTaGGCAAGGCCAGCTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: LLHTSVGECSLACIYNNEGTTGH*ARPAPL Trigger: TAGAGGAGCTGGCCTTGCCCAGTGTCCTGTGGTGCC...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGCTGTGTCAGACCTTCTaGACACAGTGGTTGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: HRVAGICNNATSAQQEGGLCQTF*TQWLLL Trigger: CAACAACAACCACTGTGTCCAGAAGGTCTGACACAG...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGTGGAAAGGCACTGTATaGCAACTGCAGAATGAACGA | + |
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Preference number: 2 (lower is better) Translates to: HRVAGICNNATSAQQEGGWKGTV*QLQNER Trigger: TCGTTCATTCTGCAGTTGCCATACAGTGCCTTTCCA...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR TCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGAGGAGGGAGGGGTTATaGCACTGGCTCTTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: LLHTSVGECSLACIYNNERREGL*HWLFGT Trigger: TGTGCCAAAGAGCCAGTGTCATAACCCCTCCCTCCT...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACACTGAAAACAAGACCTaGCAAAACTCATTGTGCATT | + |
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Preference number: 2 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHTENKT*QNSLCI Trigger: AATGCACAATGAGTTTTGTCAGGTCTTGTTTTCAGT...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR TCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGTCTGGCACACCCCACTaGAAACAAGACCTGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: LLHTSVGECSLACIYNNESGTPH*KQDLTK Trigger: TTTTGTCAGGTCTTGTTTTCAGTGGGGTGTGCCAGA...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGGTAAGGAAGGGTATTTaGCCCTCTAAGAGAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LLHTSVGECSLACIYNNEVRKGI*PSKRKG Trigger: GCCCTTTCTCTTAGAGGGGCAAATACCCTTCCTTAC...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTAACTGAAAACAAGACCTaGCAAAACTCATTGTGCATT | + |
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Preference number: 2 (lower is better) Translates to: WQLQNERTNETCASPPSVTENKT*QNSLCI Trigger: AATGCACAATGAGTTTTGTCAGGTCTTGTTTTCAGT...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCACTGTGTCAGACCTTCTaGACACAGTGGTTGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SPVTVIKNFYQPSPNISALCQTF*TQWLLL Trigger: CAACAACAACCACTGTGTCCAGAAGGTCTGACACAG...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR TCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGTGGTTACAAATGCTTTaGTTTGCAACTGTGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLHTSVGECSLACIYNNEWLQML*FATVTS Trigger: GCTGGTCACAGTTGCAAATCAAAGCATTTGTAACCA...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCATTGATGCCGTTCAGGTaGGGGTTAAATCAATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SPVTVIKNFYQPSPNISALMPFR*GLNQWK Trigger: TTTCCATTGATTTAACCCCCACCTGAACGGCATCAA...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR TCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGTCTGGCACACCCCACTaGAAACAAGACCTGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: YIRQIKVVRKGICPSKRKSGTPH*KQDLTK Trigger: TTTTGTCAGGTCTTGTTTTCAGTGGGGTGTGCCAGA...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR TCA 72 bp | CTAGCTCCCATGGCGCCTGTGCAGCGAGTTGCTGCCTaGCTTGACAGCCTTTGGCACCACAGGACACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LAPMAPVQRVAA*LDSLWHHRTLG Trigger: GCCCAGTGTCCTGTGGTGCCAAAGGCTGTCAAGTCAGGCAGCAACTCGCTGCACAGGCGCCATGGGAGCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGGAGTTGCTGCCTGACTaGACAGCCTTTGGCACCACA | + |
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Preference number: 3 (lower is better) Translates to: HRVAGICNNATSAQQEGGELLPD*TAFGTT Trigger: TGTGGTGCCAAAGGCTGTCAAGTCAGGCAGCAACTC...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR GCA 72 bp | ACACAGCTTCACAAAACCCACAGAGTAGCTGGGATATaGAACAATGCAACATCAGCTCAGCAGGAGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: TQLHKTHRVAGI*NNATSAQQEGG Trigger: CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTGGGTTTTGTGAAGCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATCTGGGAAAACTACAATaGCTTGAGGGTGAGCCGAGG | + |
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Preference number: 3 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNLGKLQ*LEGEPR Trigger: CCTCGGCTCACCCTCAAGCAATTGTAGTTTTCCCAG...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACTGGGAAAACTACAATaGCTTGAGGGTGAGCCGAGG | + |
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Preference number: 3 (lower is better) Translates to: KGTVWQLQNERTNETCASLGKLQ*LEGEPR Trigger: CCTCGGCTCACCCTCAAGCAATTGTAGTTTTCCCAG...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR GCA 72 bp | TCACAAAACCCACAGAGTAGCTGGGATATGCAACAATaGAACATCAGCTCAGCAGGAGGGAGGGGTTATGAC | + |
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Preference number: 3 (lower is better) Translates to: SQNPQSSWDMQQ*NISSAGGRGYD Trigger: GTCATAACCCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTGGGTTTTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CAA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGGAGTTGCTGCCTGACTaGACAGCCTTTGGCACCACA | + |
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Preference number: 3 (lower is better) Translates to: LLHTSVGECSLACIYNNEELLPD*TAFGTT Trigger: TGTGGTGCCAAAGGCTGTCAAGTCAGGCAGCAACTC...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR CCA 72 bp | TTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATaGCAACTGCAGAATGAACGAACCAATGAGACCTGC | + |
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Preference number: 3 (lower is better) Translates to: FRWGLNQWKGTV*QLQNERTNETC Trigger: GCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR TCA 72 bp | TGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATaGGGTAGAGACTTCACACACAGCTTCACAAAACCC | + |
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Preference number: 3 (lower is better) Translates to: CRRVQSCLHIQQ*GRDFTHSFTKP Trigger: GGGTTTTGTGAAGCTGTGTGTGAAGTCTCTACCTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR CCA 72 bp | ACTCAATTGATGCCGTTCAGGTGGGGGTTAAATCAATaGAAAGGCACTGTATGGCAACTGCAGAATGAACGA | + |
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Preference number: 3 (lower is better) Translates to: TQLMPFRWGLNQ*KGTVWQLQNER Trigger: TCGTTCATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGGCATCAATTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR CCA 72 bp | AAACACCAGCTGAACACTCAATTGATGCCGTTCAGGTaGGGGTTAAATCAATGGAAAGGCACTGTATGGCAA | + |
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Preference number: 3 (lower is better) Translates to: KHQLNTQLMPFR*GLNQWKGTVWQ Trigger: TTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGGCATCAATTGAGTGTTCAGCTGGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATGGACACAGTGGTTGTaGTTGTTATTTTCATTTGCA | + |
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Preference number: 3 (lower is better) Translates to: TVWQLQNERTNETCASPPWTQWL*LLFSFA Trigger: TGCAAATGAAAATAACAACAACAACCACTGTGTCCA...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR-3UTR CAA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGCAGCTGAACACTCAATaGATGCCGTTCAGGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: YIRQIKVVRKGICPSKRKQLNTQ*MPFRWG Trigger: CCCCCACCTGAACGGCATCAATTGAGTGTTCAGCTG...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR GCA 72 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTaGATATACAACAATGAGGTAGAGACTTCACACACA | + |
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Preference number: 3 (lower is better) Translates to: LLHTSVGECSLA*IYNNEVETSHT Trigger: TGTGTGTGAAGTCTCTACCTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| 3UTR CAA 72 bp | CTCCCATGGCGCCTGTGCAGCGAGTTGCTGCCTGACTaGACAGCCTTTGGCACCACAGGACACTGGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LPWRLCSELLPD*TAFGTTGHWAR Trigger: CCTTGCCCAGTGTCCTGTGGTGCCAAAGGCTGTCAAGTCAGGCAGCAACTCGCTGCACAGGCGCCATGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCACCCAGCCAGTCAGACTaGGGGACTGCAGGCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPPSQSD*GTAGQG Trigger: GCCTTGGCCTGCAGTCCCTCAGTCTGACTGGCTGGG...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAAACGGGAGTCCAGGATaGGCCGGGTGTCCAGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPNGSPG*AGCPGE Trigger: CTCGCCTGGACACCCGGCCCATCCTGGACTCCCGTT...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCCAGAGCCTCAGCATTaGGCATCCCGTGCAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHPEPQH*ASRARH Trigger: GTGCCTTGCACGGGATGCTCAATGCTGAGGCTCTGG...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAGGCGTAGGCCTTCCATaGTGTGTCGCCAGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPGVGLP*CVASAS Trigger: GCTGGCACTGGCGACACAGCATGGAAGGCCTACGCC...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACGAAGCCACTCGTGTCTaGGTCAGAGGGGCTGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHEATRV*VRGAAR Trigger: TCTAGCAGCCCCTCTGACTCAGACACGAGTGGCTTC...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTACCAGAGCCTCAGCATTaGGCATCCCGTGCAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: WQLQNERTNETCASPPSVPEPQH*ASRARH Trigger: GTGCCTTGCACGGGATGCTCAATGCTGAGGCTCTGG...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAGACACCGGGGGTGCTTaGCATCCTTACCAGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPDTGGA*HPYQAT Trigger: AGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTC...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCAGGAGGACACCGGGGGTaGTTGCCATCCTTACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KGTVWQLQNERTNETCASGGHRG*LPSLPG Trigger: GCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCC...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCAGGCGTAGGCCTTCCATaGTGTGTCGCCAGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTVWQLQNERTNETCASGVGLP*CVASAS Trigger: GCTGGCACTGGCGACACAGCATGGAAGGCCTACGCC...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGCAAGCCATTTGCATCTaGGAGGCCACGGGGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HRVAGICNNATSAQQEGGQAICI*EATGRF Trigger: GAATCTCCCCGTGGCCTCCCAGATGCAAATGGCTTG...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGCTTTGGAGCACTGGTTaGAGAGGGAGCAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRVAGICNNATSAQQEGGLWSTG*RGSNCS Trigger: GCTGCAGTTGCTCCCTCTCCAACCAGTGCTCCAAAG...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTAGCTGCAGCCTGCCGGTaGAGTCTAGCCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WQLQNERTNETCASPPSVAAACR*SLASLS Trigger: AGAGAGAGAGGCTAGACTCCACCGGCAGGCTGCAGC...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACTTCCGGGGAGGAAGCTaGCCACTCCAGGTACACGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHFRGGS*PLQVHV Trigger: TACGTGTACCTGGAGTGGCCAGCTTCCTCCCCGGAA...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGTTCACTCAGGCCATCTaGGCTCAGCGGGTCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRVAGICNNATSAQQEGGFTQAI*AQRVMR Trigger: TCTCATGACCCGCTGAGCCCAGATGGCCTGAGTGAA...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAGAAGCCACTCGTGTCTaGGTCAGAGGGGCTGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPEATRV*VRGAAR Trigger: TCTAGCAGCCCCTCTGACTCAGACACGAGTGGCTTC...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTACTGGGATCCAGCCTCTaGGATGGGCTCCAGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQLQNERTNETCASPPSVLGSSL*DGLQTK Trigger: CTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAG...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTAAAGGCACAAGCCATTTaGATCTGGGAGGCCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WQLQNERTNETCASPPSVKAQAI*IWEATG Trigger: CCCCGTGGCCTCCCAGATGCAAATGGCTTGTGCCTT...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCAGCTGCAGCCTGCCGGTaGAGTCTAGCCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTVWQLQNERTNETCASAAACR*SLASLS Trigger: AGAGAGAGAGGCTAGACTCCACCGGCAGGCTGCAGC...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAAACACCGTCCTGCTaGGATCCAGCCTCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHQTPSC*DPASEM Trigger: CATCTCAGAGGCTGGATCCCAGCAGGACGGTGTTTG...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCACCCAGCCAGTCAGACTaGGGGACTGCAGGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISAPSQSD*GTAGQG Trigger: GCCTTGGCCTGCAGTCCCTCAGTCTGACTGGCTGGG...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATCTGGGATCCAGCCTCTaGGATGGGCTCCAGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNLGSSL*DGLQTK Trigger: CTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAG...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCACAACAAACACCGTCCTaGTGGGATCCAGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPQQTPS*WDPASE Trigger: CTCAGAGGCTGGATCCCAGCAGGACGGTGTTTGTTG...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGGAGGAGTCTGAGTCCTaGGTGCTCCAGGGTCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHTSVGECSLACIYNNEEESES*VLQGRS Trigger: GGACCGACCCTGGAGCACCCAGGACTCAGACTCCTC...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTACTTTGGAGCACTGGTTaGAGAGGGAGCAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQLQNERTNETCASPPSVLWSTG*RGSNCS Trigger: GCTGCAGTTGCTCCCTCTCCAACCAGTGCTCCAAAG...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATTTCCGGGGAGGAAGCTaGCCACTCCAGGTACACGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNFRGGS*PLQVHV Trigger: TACGTGTACCTGGAGTGGCCAGCTTCCTCCCCGGAA...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATGGTCTGATCCAGAGCTaGAGCCACTCGTGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNGLIQS*SHSCLS Trigger: ACTCAGACACGAGTGGCTTCAGCTCTGGATCAGACC...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGCCACAAAAGCAGCGGTaGCTGCTTTCAGATAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: HRVAGICNNATSAQQEGGPQKQR*LLSDNY Trigger: GTAGTTATCTGAAAGCAGTCACCGCTGCTTTTGTGG...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATTACCTGTACCTCTTTaGAGCGCATCCTTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPLPVPL*SASFGW Trigger: CCAGCCGAAGGATGCGCTGCAAAGAGGTACAGGTAA...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAGGCTCCAGACAAAGTTaGTGTCAGCCAAGACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPGSRQS*CQPRPK Trigger: CTTGGGTCTTGGCTGACAGCAACTTTGTCTGGAGCC...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTAAGAGCAGCTTGTTCTTaGTCCATTCGGGACCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: WQLQNERTNETCASPPSVRAACS*SIRDPT Trigger: CGTTGGGTCCCGAATGGACCAAGAACAAGCTGCTCT...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATCAAACACCGTCCTGCTaGGATCCAGCCTCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNQTPSC*DPASEM Trigger: CATCTCAGAGGCTGGATCCCAGCAGGACGGTGTTTG...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGAAGGCACAAGCCATTTaGATCTGGGAGGCCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHTSVGECSLACIYNNEKAQAI*IWEATG Trigger: CCCCGTGGCCTCCCAGATGCAAATGGCTTGTGCCTT...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATGGCTCCAGACAAAGTTaGTGTCAGCCAAGACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNGSRQS*CQPRPK Trigger: CTTGGGTCTTGGCTGACAGCAACTTTGTCTGGAGCC...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCAAGAGCAGCTTGTTCTTaGTCCATTCGGGACCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: KGTVWQLQNERTNETCASRAACS*SIRDPT Trigger: CGTTGGGTCCCGAATGGACCAAGAACAAGCTGCTCT...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCAAATACACATACCCTTTaGGAGGACACCGGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTVWQLQNERTNETCASNTHTL*EDTGGA Trigger: AGCACCCCCGGTGTCCTCCCAAAGGGTATGTGTATT...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACAACTACGTTGGTTATTaGAAGTCACACGACCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHNYVGY*KSHDQT Trigger: GGTCTGGTCGTGTGACTTTCAATAACCAACGTAGTT...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTATACTGACTGTGTGCTaGTCTGGGCTGAGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: INPSVGICVRPSGHSGCCILTVC*SGLRSL Trigger: CAGACTCCTCAGCCCAGAGCAGCACACAGTCAGTAT...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTTTACCTGTACCTCTTTaGAGCGCATCCTTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: INPSVGICVRPSGHSGCCLPVPL*SASFGW Trigger: CCAGCCGAAGGATGCGCTGCAAAGAGGTACAGGTAA...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCACCTTGCATGAGTAGATaGGGTTCTTATAGTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPPCMSR*GSYSSG Trigger: CCCGGAACTATAAGAACCCCATCTACTCATGCAAGG...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATATCCAGCCTCTGAGATaGGCTCCAGACAAAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNIQPLR*APDKVA Trigger: AGCAACTTTGTCTGGAGCCCATCTCAGAGGCTGGAT...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTAATAGGTCATTCAAGATaGCAGCCAGAGCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WQLQNERTNETCASPPSVIGHSR*QPEPQH Trigger: ATGCTGAGGCTCTGGCTGCCATCTTGAATGACCTAT...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGTTGTACAGACTTTACTaGAGTCCAGTGAATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRVAGICNNATSAQQEGGLYRLY*SPVNHP Trigger: TGGATGATTCACTGGACTTCAGTAAAGTCTGTACAA...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACGTGGATTTTGGAGCATaGTTAATACTGACTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHVDFGA*LILTVC Trigger: GCACACAGTCAGTATTAAGCATGCTCCAAAATCCAC...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCACCAATGGGGTACTTGTaGTTATCTGTGTCAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPPMGYL*LSVSIP Trigger: TGGGATTGACACAGATAAGCACAAGTACCCCATTGG...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAAGTGCAGGAACTTCTTaGTTGTCCCAGCAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVWQLQNERTNETCASPPSAGTS*LSQQSF Trigger: AAAGGATTGCTGGGACAACCAAGAAGTTCCTGCACT...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATATAGGTCATTCAAGATaGCAGCCAGAGCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNIGHSR*QPEPQH Trigger: ATGCTGAGGCTCTGGCTGCCATCTTGAATGACCTAT...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACATCCTTTATTCTTCCTaGTGCTTCTTCCAGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHILYSS*CFFQRE Trigger: TTCTCTCTGGAAGAAGCAGCAGGAAGAATAAAGGAT...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098331.10 |
||
| CDS-3UTR GCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATGCAGAGGAGGGGAAATaGGAAGGCTTGAAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNAEEGK*EGLKSN Trigger: ATTTGATTTCAAGCCTTCGCATTTCCCCTCCTCTGC...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGGACACCGGGGGTGCTTaGCATCCTTACCAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKDTGGA*HPYQAT Trigger: AGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTC...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR GCA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATCCAATGGGGTACTTGTaGTTATCTGTGTCAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNPMGYL*LSVSIP Trigger: TGGGATTGACACAGATAAGCACAAGTACCCCATTGG...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCATCTCTCTATGCTGAATaGGTCTTTAGGAGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGTVWQLQNERTNETCASSLYAE*VFRSSK Trigger: CTTGGAGCTCCTAAAGACCCATTCAGCATAGAGAGA...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGATCCAGCCTCTGAGATaGGCTCCAGACAAAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHTSVGECSLACIYNNEIQPLR*APDKVA Trigger: AGCAACTTTGTCTGGAGCCCATCTCAGAGGCTGGAT...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTTCTCTCTATGCTGAATaGGTCTTTAGGAGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: INPSVGICVRPSGHSGCCSLYAE*VFRSSK Trigger: CTTGGAGCTCCTAAAGACCCATTCAGCATAGAGAGA...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCACACGACCAGACCCAATaGGGTACTTGTGCTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISAHDQTQ*GTCAYL Trigger: CAGATAAGCACAAGTACCCCATTGGGTCTGGTCGTG...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGGCGAGATCCTCTAACTaGGGGTGCTGGGAACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKARSSN*GCWELV Trigger: GACAAGTTCCCAGCACCCTCAGTTAGAGGATCTCGC...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGGGTCTGATCCAGAGCTaGAGCCACTCGTGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKGLIQS*SHSCLS Trigger: ACTCAGACACGAGTGGCTTCAGCTCTGGATCAGACC...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCACCACAAAAGCAGCGGTaGCTGCTTTCAGATAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISAPQKQR*LLSDNY Trigger: GTAGTTATCTGAAAGCAGTCACCGCTGCTTTTGTGG...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGCAACAAACACCGTCCTaGTGGGATCCAGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKQQTPS*WDPASE Trigger: CTCAGAGGCTGGATCCCAGCAGGACGGTGTTTGTTG...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGAGTGCAGGAACTTCTTaGTTGTCCCAGCAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHTSVGECSLACIYNNESAGTS*LSQQSF Trigger: AAAGGATTGCTGGGACAACCAAGAAGTTCCTGCACT...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGCAAGCCATTTGCATCTaGGAGGCCACGGGGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKQAICI*EATGRF Trigger: GAATCTCCCCGTGGCCTCCCAGATGCAAATGGCTTG...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | AAAGGCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCATTTCCCAGTGGATTTTaGAGCATGCTTAATACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGTVWQLQNERTNETCASFPSGF*SMLNTD Trigger: GTCAGTATTAAGCATGCTCCAAAATCCACTGGGAAA...TGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTATCAAATCTGAGAGATaGTCTGATCCAGAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: INPSVGICVRPSGHSGCCIKSER*SDPELK Trigger: CTTCAGCTCTGGATCAGACCATCTCTCAGATTTGAT...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCACCTTGCATGAGTAGATaGGGTTCTTATAGTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISAPCMSR*GSYSSG Trigger: CCCGGAACTATAAGAACCCCATCTACTCATGCAAGG...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGTTCACTCAGGCCATCTaGGCTCAGCGGGTCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKFTQAI*AQRVMR Trigger: TCTCATGACCCGCTGAGCCCAGATGGCCTGAGTGAA...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGTTCGGCTGGACATCTTaGAATAATATTCACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHTSVGECSLACIYNNEFGWTS*NNIHSG Trigger: GCCTGAGTGAATATTATTTCAAGATGTCCAGCCGAA...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCAAACTACGTTGGTTATTaGAAGTCACACGACCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISANYVGY*KSHDQT Trigger: GGTCTGGTCGTGTGACTTTCAATAACCAACGTAGTT...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGATACTGACTGTGTGCTaGTCTGGGCTGAGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKILTVC*SGLRSL Trigger: CAGACTCCTCAGCCCAGAGCAGCACACAGTCAGTAT...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGGTGGATTTTGGAGCATaGTTAATACTGACTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHTSVGECSLACIYNNEVDFGA*LILTVC Trigger: GCACACAGTCAGTATTAAGCATGCTCCAAAATCCAC...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCATTCGGCTGGACATCTTaGAATAATATTCACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISAFGWTS*NNIHSG Trigger: GCCTGAGTGAATATTATTTCAAGATGTCCAGCCGAA...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCAATCAAATCTGAGAGATaGTCTGATCCAGAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISAIKSER*SDPELK Trigger: CTTCAGCTCTGGATCAGACCATCTCTCAGATTTGAT...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGCACGACCAGACCCAATaGGGTACTTGTGCTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKHDQTQ*GTCAYL Trigger: CAGATAAGCACAAGTACCCCATTGGGTCTGGTCGTG...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR TCA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCATTGTACAGACTTTACTaGAGTCCAGTGAATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPVTVIKNFYQPSPNISALYRLY*SPVNHP Trigger: TGGATGATTCACTGGACTTCAGTAAAGTCTGTACAA...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGTTAATACTGACTGTGTaGTGCTCTGGGCTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKLILTV*CSGLRS Trigger: ACTCCTCAGCCCAGAGCAGCACACAGTCAGTATTAA...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR GCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGGCAGAGGAGGGGAAATaGGAAGGCTTGAAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKAEEGK*EGLKSN Trigger: ATTTGATTTCAAGCCTTCGCATTTCCCCTCCTCTGC...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CCA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGTTTCCCAGTGGATTTTaGAGCATGCTTAATACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YIRQIKVVRKGICPSKRKFPSGF*SMLNTD Trigger: GTCAGTATTAAGCATGCTCCAAAATCCACTGGGAAA...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS GCA 90 bp | TCCTGGGTGCTCCAGGGTCGGTCCCAGCCAGTCAGACTGAGGGACTaGAGGCCAAGGCACAAGCCATTTGCATCTGGGAGGCCACGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SWVLQGRSQPVRLRD*RPRHKPFASGRPRG Trigger: TCCCCGTGGCCTCCCAGATGCAAATGGCTTGTGCCTTGGCCTGCAGTCCCTCAGTCTGACTGGCTGGGACCGACCCTGGAGCACCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS TCA 90 bp | ACGGGAGTCCAGGATGGGCCGGGTGTCCAGGCGAGATCCTCTAACTaGGGGTGCTGGGAACTTGTCCAAGTCAGACCCAAGGGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGVQDGPGVQARSSN*GCWELVQVRPKGIQ Trigger: CTGGATCCCCTTGGGTCTGACTTGGACAAGTTCCCAGCACCCTCAGTTAGAGGATCTCGCCTGGACACCCGGCCCATCCTGGACTCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS GCA 90 bp | CCAGCCAGTCAGACTGAGGGACTGCAGGCCAAGGCACAAGCCATTTaGATCTGGGAGGCCACGGGGAGATTCTTGCGCAGAGGTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PASQTEGLQAKAQAI*IWEATGRFLRRGGE Trigger: TTCCCCACCTCTGCGCAAGAATCTCCCCGTGGCCTCCCAGATGCAAATGGCTTGTGCCTTGGCCTGCAGTCCCTCAGTCTGACTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS TCA 90 bp | CCGTGCAAGGCACCAACAAACACCGTCCTGCTGGGATCCAGCCTCTaGGATGGGCTCCAGACAAAGTTGCTGTCAGCCAAGACCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCKAPTNTVLLGSSL*DGLQTKLLSAKTQG Trigger: CCCTTGGGTCTTGGCTGACAGCAACTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAGCAGGACGGTGTTTGTTGGTGCCTTGCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS-3UTR CAA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGGGACACCGGGGGTGCTaGCCATCCTTACCAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HRVAGICNNATSAQQEGGGHRGC*PSLPGH Trigger: GTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCC...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS CCA 90 bp | CCCAGTGGATTTTGGAGCATGCTTAATACTGACTGTGTGCTGCTCTaGGCTGAGGAGTCTGAGTCCTGGGTGCTCCAGGGTCGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSGFWSMLNTDCVLL*AEESESWVLQGRSQ Trigger: CTGGGACCGACCCTGGAGCACCCAGGACTCAGACTCCTCAGCCCAGAGCAGCACACAGTCAGTATTAAGCATGCTCCAAAATCCACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS-3UTR CAA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACGGACACCGGGGGTGCTaGCCATCCTTACCAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHGHRGC*PSLPGH Trigger: GTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCC...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS GCA 90 bp | CCGTCCTGCTGGGATCCAGCCTCTGAGATGGGCTCCAGACAAAGTTaGTGTCAGCCAAGACCCAAGGGATTACCTGTACCTCTTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSCWDPASEMGSRQS*CQPRPKGLPVPLCS Trigger: GCTGCAAAGAGGTACAGGTAATCCCTTGGGTCTTGGCTGACAGCAACTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAGCAGGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS CCA 90 bp | CAAGGCACCAACAAACACCGTCCTGCTGGGATCCAGCCTCTGAGATaGGCTCCAGACAAAGTTGCTGTCAGCCAAGACCCAAGGGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: QGTNKHRPAGIQPLR*APDKVAVSQDPRDY Trigger: GTAATCCCTTGGGTCTTGGCTGACAGCAACTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAGCAGGACGGTGTTTGTTGGTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS-3UTR CAA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGCTCCTGGCCATCTCTTaGGAGCACTGGTTGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRVAGICNNATSAQQEGGLLAIS*EHWLER Trigger: CCTCTCCAACCAGTGCTCCAAAGAGATGGCCAGGAG...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS TCA 90 bp | CTCCACCAAATAGGTCATTCAAGATGGCAGCCAGAGCCTCAGCATTaGGCATCCCGTGCAAGGCACCAACAAACACCGTCCTGCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHQIGHSRWQPEPQH*ASRARHQQTPSCWD Trigger: ATCCCAGCAGGACGGTGTTTGTTGGTGCCTTGCACGGGATGCTCAATGCTGAGGCTCTGGCTGCCATCTTGAATGACCTATTTGGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS GCA 90 bp | CAAACACCAAATACACATACCCTTTGGGAGGACACCGGGGGTGCTTaGCATCCTTACCAGGCCACTCCACACTCAGAGAGCCAAAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: QTPNTHTLWEDTGGA*HPYQATPHSESQKH Trigger: GTGTTTTTGGCTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGGTATGTGTATTTGGTGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130310.8 |
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| CDS CCA 90 bp | CATCCTTCGGCTGGACATCTTGAAATAATATTCACTCAGGCCATCTaGGCTCAGCGGGTCATGAGAACAAGCCTGAAGCAAGGCCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPSAGHLEIIFTQAI*AQRVMRTSLKQGPD Trigger: GTCCGGGCCTTGCTTCAGGCTTGTTCTCATGACCCGCTGAGCCCAGATGGCCTGAGTGAATATTATTTCAAGATGTCCAGCCGAAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS-3UTR CAA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAGAGGGTGCTGGGAACTaGTCCAAGTCAGACCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVWQLQNERTNETCASPPEGAGN*SKSDPR Trigger: CCTTGGGTCTGACTTGGACAAGTTCCCAGCACCCTC...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS GCA 90 bp | TACACATACCCTTTAGGCATATTACCTTTGGGAGGACACCGGGGGTaGTTGCCATCCTTACCAGGCCACTCCACACTCAGAGAGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YTYPLGILPLGGHRG*LPSLPGHSTLREPK Trigger: TTTTGGCTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGTAATATGCCTAAAGGGTATGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000178892.3 |
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| CDS GCA 90 bp | AGTTCAAACACCAAATACACATACCCTTTGGGAGGACACCGGGGGTaGTTGCCATCCTTACCAGGCCACTCCACACTCAGAGAGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSNTKYTYPLGGHRG*LPSLPGHSTLREPK Trigger: TTTTGGCTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGGTATGTGTATTTGGTGTTTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACAAGAGCAGCTTGTTCTaGGTCCATTCGGGACCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHKSSLF*VHSGPN Trigger: GTTGGGTCCCGAATGGACCAAGAACAAGCTGCTCTT...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CAA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACATTACCTGTACCTCTTaGCAGCGCATCCTTCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHITCTS*QRILRL Trigger: CAGCCGAAGGATGCGCTGCAAAGAGGTACAGGTAAT...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS TCA 90 bp | GGATTACCTGTACCTCTTTGCAGCGCATCCTTCGGCTGGACATCTTaGAATAATATTCACTCAGGCCATCTGGGCTCAGCGGGTCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPVPLCSASFGWTS*NNIHSGHLGSAGHE Trigger: CTCATGACCCGCTGAGCCCAGATGGCCTGAGTGAATATTATTTCAAGATGTCCAGCCGAAGGATGCGCTGCAAAGAGGTACAGGTAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTGAGGGTGCTGGGAACTaGTCCAAGTCAGACCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: INPSVGICVRPSGHSGCCEGAGN*SKSDPR Trigger: CCTTGGGTCTGACTTGGACAAGTTCCCAGCACCCTC...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAATTACCTGTACCTCTTaGCAGCGCATCCTTCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVWQLQNERTNETCASPPITCTS*QRILRL Trigger: CAGCCGAAGGATGCGCTGCAAAGAGGTACAGGTAAT...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCACAAGGCACAAGCCATTaGCATCTGGGAGGCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPVTVIKNFYQPSPNISAQGTSH*HLGGHG Trigger: CCCGTGGCCTCCCAGATGCAAATGGCTTGTGCCTTG...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTAAATACACATACCCTTaGGGAGGACACCGGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: INPSVGICVRPSGHSGCCKYTYP*GGHRGC Trigger: GCACCCCCGGTGTCCTCCCAAAGGGTATGTGTATTT...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACGCAGGAACTTCTTGGTaGTCCCAGCAATCCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: ALYGNCRMNEPMRPAHHHAGTSW*SQQSFI Trigger: AATAAAGGATTGCTGGGACAACCAAGAAGTTCCTGC...GTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTTGCAGCAAGAGCAGCTaGTTCTTGGTCCATTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: INPSVGICVRPSGHSGCCCSKSS*FLVHSG Trigger: TCCCGAATGGACCAAGAACAAGCTGCTCTTGCTGCA...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGAAGAGCAGCTTGTTCTaGGTCCATTCGGGACCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLHTSVGECSLACIYNNEKSSLF*VHSGPN Trigger: GTTGGGTCCCGAATGGACCAAGAACAAGCTGCTCTT...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATGACCCAATGGGGTACTaGTGCTTATCTGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNDPMGY*CLSVSI Trigger: GATTGACACAGATAAGCACAAGTACCCCATTGGGTC...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAGGGAAATGCGAAGGCTaGAAATCAAATCTGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TVWQLQNERTNETCASPPGKCEG*KSNLRD Trigger: ATCTCTCAGATTTGATTTCAAGCCTTCGCATTTCCC...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAGTAGCTGGGATATGCAACAATGCAACATCAGCTCAGCAGGAGGGAGGGTTTCAGATAACTACGTaGGTTATTGAAAGTCACACG | + |
|
Preference number: 5 (lower is better) Translates to: HRVAGICNNATSAQQEGGFQITT*VIESHT Trigger: CGTGTGACTTTCAATAACCAACGTAGTTATCTGAAA...CCCTCCCTCCTGCTGAGCTGATGTTGCATTGTTGCATATCCCAGCTACTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CAA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATGTAAACTTGGTGGTTTaGATCTCCACAAAAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNVNLVV*ISTKAA Trigger: CGCTGCTTTTGTGGAGATCAAAACCACCAAGTTTAC...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTATGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCAACCTTCTTGGTAAACTaGGTGGTTTTGATCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TVWQLQNERTNETCASPPTFLVN*VVLIST Trigger: TGTGGAGATCAAAACCACCAAGTTTACCAAGAAGGT...TGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCATACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAACTGCAGAATGAACGAACCAATGAGACCTGCGCATCACCACCATCAGTAACCTTCTTGGTAAACTaGGTGGTTTTGATCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: WQLQNERTNETCASPPSVTFLVN*VVLIST Trigger: TGTGGAGATCAAAACCACCAAGTTTACCAAGAAGGT...TACTGATGGTGGTGATGCGCAGGTCTCATTGGTTCGTTCATTCTGCAGTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | CCGTTCAGGTGGGGGTTAAATCAATGGAAAGGCACTGTATGGCAACTGCAGAATCGAAAGATATTGGCATaGCTACATGTAGAGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PFRWGLNQWKGTVWQLQNRKILA*LHVESA Trigger: TGCACTCTCTACATGTAGCAATGCCAATATCTTTCG...ATTCTGCAGTTGCCATACAGTGCCTTTCCATTGATTTAACCCCCACCTGAACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CAA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGCTCCTGGCCATCTCTTaGGAGCACTGGTTGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YIRQIKVVRKGICPSKRKLLAIS*EHWLER Trigger: CCTCTCCAACCAGTGCTCCAAAGAGATGGCCAGGAG...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS CCA 90 bp | CGAAAGATATTGGCATTGCTACATGTAGAGAGTGCAGGAACTTCTTaGTTGTCCCAGCAATCCTTTATTCTTCCTGCTGCTTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKILALLHVESAGTS*LSQQSFILPAASSR Trigger: TCTGGAAGAAGCAGCAGGAAGAATAAAGGATTGCTGGGACAACCAAGAAGTTCCTGCACTCTCTACATGTAGCAATGCCAATATCTTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000178892.3 |
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| CDS-3UTR CAA 90 bp | ATAAACCCAAGTGTAGGCATCTGTGTCAGACCTTCTGGACACAGTGGTTGTTGTGGGAAATGCGAAGGCTaGAAATCAAATCTGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: INPSVGICVRPSGHSGCCGKCEG*KSNLRD Trigger: ATCTCTCAGATTTGATTTCAAGCCTTCGCATTTCCC...ACAACAACCACTGTGTCCAGAAGGTCTGACACAGATGCCTACACTTGGGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTGTGACTGTGATTAAAAACTTCTATCAACCCTCCCCCAACATAAGTGCAGACCCAATGGGGTACTaGTGCTTATCTGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: SPVTVIKNFYQPSPNISADPMGY*CLSVSI Trigger: GATTGACACAGATAAGCACAAGTACCCCATTGGGTC...TGCACTTATGTTGGGGGAGGGTTGATAGAAGTTTTTAATCACAGTCACAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS GCA 90 bp | GGCATTTATCCTTCGAAAGATATTGGCATTGCTACATGTAGAGAGTaGAGGAACTTCTTGGTTGTCCCAGCAATCCTTTATTCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GIYPSKDIGIATCRE*RNFLVVPAILYSSC Trigger: GCAGGAAGAATAAAGGATTGCTGGGACAACCAAGAAGTTCCTGCACTCTCTACATGTAGCAATGCCAATATCTTTCGAAGGATAAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS-3UTR CAA 90 bp | TTACTCCACACATCTGTAGGAGAGTGCAGTCTTGCCTGCATATACAACAATGAGATCCTTCGAAAGATATaGGCATTGCTACATGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLHTSVGECSLACIYNNEILRKI*ALLHVE Trigger: CTCTACATGTAGCAATGCCAATATCTTTCGAAGGAT...CTCATTGTTGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGTGGAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CAA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGGTAAACTTGGTGGTTTaGATCTCCACAAAAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: YIRQIKVVRKGICPSKRKVNLVV*ISTKAA Trigger: CGCTGCTTTTGTGGAGATCAAAACCACCAAGTTTAC...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS-3UTR CAA 90 bp | TACATTCGTCAAATAAAAGTTGTAAGGAAGGGTATTTGCCCCTCTAAGAGAAAGATCCTTCGAAAGATATaGGCATTGCTACATGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YIRQIKVVRKGICPSKRKILRKI*ALLHVE Trigger: CTCTACATGTAGCAATGCCAATATCTTTCGAAGGAT...CTTTCTCTTAGAGGGGCAAATACCCTTCCTTACAACTTTTATTTGACGAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 |
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| CDS TCA 72 bp | CCTGGGTGCTCCAGGGTCGGTCCCAGCCAGTCAGACTaGGGGACTGCAGGCCAAGGCACAAGCCATTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGCSRVGPSQSD*GTAGQGTSHLH Trigger: ATGCAAATGGCTTGTGCCTTGGCCTGCAGTCCCTCAGTCTGACTGGCTGGGACCGACCCTGGAGCACCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS TCA 72 bp | CAGGATGGGCCGGGTGTCCAGGCGAGATCCTCTAACTaGGGGTGCTGGGAACTTGTCCAAGTCAGACCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: QDGPGVQARSSN*GCWELVQVRPK Trigger: CTTGGGTCTGACTTGGACAAGTTCCCAGCACCCTCAGTTAGAGGATCTCGCCTGGACACCCGGCCCATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS CAA 90 bp | GGCCGGGTGTCCAGGCGAGATCCTCTAACTGAGGGTGCTGGGAACTaGTCCAAGTCAGACCCAAGGGGATCCAGAGACAGGAAGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRVSRRDPLTEGAGN*SKSDPRGSRDRKLK Trigger: CTTGAGCTTCCTGTCTCTGGATCCCCTTGGGTCTGACTTGGACAAGTTCCCAGCACCCTCAGTTAGAGGATCTCGCCTGGACACCCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS GCA 72 bp | AAGATGGCAGCCAGAGCCTCAGCATTGAGCATCCCGTaGAAGGCACCAACAAACACCGTCCTGCTGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: KMAARASALSIP*KAPTNTVLLGS Trigger: GGATCCCAGCAGGACGGTGTTTGTTGGTGCCTTGCACGGGATGCTCAATGCTGAGGCTCTGGCTGCCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS CCA 72 bp | GCATCCCGTGCAAGGCACCAACAAACACCGTCCTGCTaGGATCCAGCCTCTGAGATGGGCTCCAGACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASRARHQQTPSC*DPASEMGSRQS Trigger: ACTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAGCAGGACGGTGTTTGTTGGTGCCTTGCACGGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS TCA 72 bp | GCACCAACAAACACCGTCCTGCTGGGATCCAGCCTCTaGGATGGGCTCCAGACAAAGTTGCTGTCAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: APTNTVLLGSSL*DGLQTKLLSAK Trigger: CTTGGCTGACAGCAACTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAGCAGGACGGTGTTTGTTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS GCA 72 bp | AATACACATACCCTTTGGGAGGACACCGGGGGTGCTTaGCATCCTTACCAGGCCACTCCACACTCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTHTLWEDTGGA*HPYQATPHSES Trigger: GCTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGGTATGTGTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130310.8 |
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| CDS GCA 72 bp | CCTTTAGGCATATTACCTTTGGGAGGACACCGGGGGTaGTTGCCATCCTTACCAGGCCACTCCACACTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLGILPLGGHRG*LPSLPGHSTLR Trigger: TCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGTAATATGCCTAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000178892.3 |
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| CDS CCA 72 bp | CACAGAAGCTCCTGGCCATCTCTTTGGAGCACTGGTTaGAGAGGGAGCAACTGCAGCAAGAGCAGCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HRSSWPSLWSTG*RGSNCSKSSLF Trigger: GAACAAGCTGCTCTTGCTGCAGTTGCTCCCTCTCCAACCAGTGCTCCAAAGAGATGGCCAGGAGCTTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
||
| CDS CCA 72 bp | AACAAACACCGTCCTGCTGGGATCCAGCCTCTGAGATaGGCTCCAGACAAAGTTGCTGTCAGCCAAGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: NKHRPAGIQPLR*APDKVAVSQDP Trigger: TGGGTCTTGGCTGACAGCAACTTTGTCTGGAGCCCATCTCAGAGGCTGGATCCCAGCAGGACGGTGTTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
||
| CDS CAA 72 bp | TTAGGCATATTACCTTTGGGAGGACACCGGGGGTGCTaGCCATCCTTACCAGGCCACTCCACACTCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGILPLGGHRGC*PSLPGHSTLRE Trigger: CTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGTAATATGCCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000178892.3 |
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| CDS CAA 72 bp | AAATACACATACCCTTTGGGAGGACACCGGGGGTGCTaGCCATCCTTACCAGGCCACTCCACACTCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KYTYPLGGHRGC*PSLPGHSTLRE Trigger: CTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGGTATGTGTATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130310.8 |
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| CDS CCA 72 bp | GTACACGTAGCTTCATTCACAGCTGCAGCCTGCCGGTaGAGTCTAGCCTCTCTCTCTATGCTGAATGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VHVASFTAAACR*SLASLSMLNGS Trigger: AGACCCATTCAGCATAGAGAGAGAGGCTAGACTCCACCGGCAGGCTGCAGCTGTGAATGAAGCTACGTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS CCA 72 bp | AAGGAACGCCTCCTAGGAACACCTTGCATGAGTAGATaGGGTTCTTATAGTTCCGGGGAGGAAGCTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KERLLGTPCMSR*GSYSSGEEAGH Trigger: GTGGCCAGCTTCCTCCCCGGAACTATAAGAACCCCATCTACTCATGCAAGGTGTTCCTAGGAGGCGTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS CAA 90 bp | ACATACCCTTTAGGCATATTACCTTTGGGAGGACACCGGGGGTGCTaGCCATCCTTACCAGGCCACTCCACACTCAGAGAGCCAAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: TYPLGILPLGGHRGC*PSLPGHSTLREPKT Trigger: TGTTTTTGGCTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGTAATATGCCTAAAGGGTATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000178892.3 |
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| CDS CAA 90 bp | TCAAACACCAAATACACATACCCTTTGGGAGGACACCGGGGGTGCTaGCCATCCTTACCAGGCCACTCCACACTCAGAGAGCCAAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SNTKYTYPLGGHRGC*PSLPGHSTLREPKT Trigger: TGTTTTTGGCTCTCTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCACCCCCGGTGTCCTCCCAAAGGGTATGTGTATTTGGTGTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130310.8 |
||
| CDS TCA 72 bp | GTACCTCTTTGCAGCGCATCCTTCGGCTGGACATCTTaGAATAATATTCACTCAGGCCATCTGGGCTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VPLCSASFGWTS*NNIHSGHLGSA Trigger: CGCTGAGCCCAGATGGCCTGAGTGAATATTATTTCAAGATGTCCAGCCGAAGGATGCGCTGCAAAGAGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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| CDS CCA 72 bp | GGGGAAATGCGAAGGCTTGAAATCAAATCTGAGAGATaGTCTGATCCAGAGCTGAAGCCACTCGTGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GEMRRLEIKSER*SDPELKPLVSE Trigger: CTCAGACACGAGTGGCTTCAGCTCTGGATCAGACCATCTCTCAGATTTGATTTCAAGCCTTCGCATTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
||
| CDS CCA 72 bp | GCTGGACATCTTGAAATAATATTCACTCAGGCCATCTaGGCTCAGCGGGTCATGAGAACAAGCCTGAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGHLEIIFTQAI*AQRVMRTSLKQ Trigger: TTGCTTCAGGCTTGTTCTCATGACCCGCTGAGCCCAGATGGCCTGAGTGAATATTATTTCAAGATGTCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
||
| CDS CAA 72 bp | CACAAAAGCAGCGGTGACTGCTTTCAGATAACTACGTaGGTTATTGAAAGTCACACGACCAGACCCAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: HKSSGDCFQITT*VIESHTTRPNG Trigger: CCCATTGGGTCTGGTCGTGTGACTTTCAATAACCAACGTAGTTATCTGAAAGCAGTCACCGCTGCTTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
||
| CDS CAA 90 bp | TTTGATCTCCACAAAAGCAGCGGTGACTGCTTTCAGATAACTACGTaGGTTATTGAAAGTCACACGACCAGACCCAATGGGGTACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FDLHKSSGDCFQITT*VIESHTTRPNGVLV Trigger: CACAAGTACCCCATTGGGTCTGGTCGTGTGACTTTCAATAACCAACGTAGTTATCTGAAAGCAGTCACCGCTGCTTTTGTGGAGATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
||
| CDS CAA 90 bp | AAGATATTGGCATTGCTACATGTAGAGAGTGCAGGAACTTCTTGGTaGTCCCAGCAATCCTTTATTCTTCCTGCTGCTTCTTCCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KILALLHVESAGTSW*SQQSFILPAASSRE Trigger: CTCTCTGGAAGAAGCAGCAGGAAGAATAAAGGATTGCTGGGACAACCAAGAAGTTCCTGCACTCTCTACATGTAGCAATGCCAATATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000178892.3 |
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| CDS CAA 90 bp | TCGAAAGATATTGGCATTGCTACATGTAGAGAGTGCAGGAACTTCTaGGTTGTCCCAGCAATCCTTTATTCTTCCTGCTGCTTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SKDIGIATCRECRNF*VVPAILYSSCCFFQ Trigger: CTGGAAGAAGCAGCAGGAAGAATAAAGGATTGCTGGGACAACCAAGAAGTTCCTGCACTCTCTACATGTAGCAATGCCAATATCTTTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098331.10 ENSMUST00000178892.3 |
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| CDS CAA 72 bp | TCCAAAATGGCATTTATCCTTCGAAAGATATTGGCATaGCTACATGTAGAGAGTGCAGGAACTTCTTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SKMAFILRKILA*LHVESAGTSWL Trigger: CAACCAAGAAGTTCCTGCACTCTCTACATGTAGCAATGCCAATATCTTTCGAAGGATAAATGCCATTTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098331.10 ENSMUST00000130310.8 ENSMUST00000178892.3 |
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