Pregenerated sensors for CPD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020841Ensembl transcript IDs: ENSMUST00000021201.6
Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGAAGAAATGGAAGGTCTCCAGGAGAAACACTGGAGGCATGCACTaGCCACCCCATATGGCTTCAGTGTCCTCGGCTGCCGAAGTAGTG | + |
Preference number: 1 (lower is better) Translates to: LKKWKVSRRNTGGMH*PPHMASVSSAAEVV Trigger: CACTACTTCGGCAGCCGAGGACACTGAAGCCATATGGGGTGGGCAGTGCATGCCTCCAGTGTTTCTCCTGGAGACCTTCCATTTCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR GCA 90 bp | TGGAGGCATGCACTGCCCACCCCATATGGCTTCAGTGTCCTCGGCTaGCGAAGTAGTGTAGGATTAGATCGGTTTCACAACCCAAAGAAG | + |
Preference number: 1 (lower is better) Translates to: WRHALPTPYGFSVLG*RSSVGLDRFHNPKK Trigger: CTTCTTTGGGTTGTGAAACCGATCTAATCCTACACTACTTCGGCAGCCGAGGACACTGAAGCCATATGGGGTGGGCAGTGCATGCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 90 bp | GACAACGTCCTTGCTTCTGCTCCATCTCCCTTTCACCTCTACTCATaGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCTCCTCT | + |
Preference number: 1 (lower is better) Translates to: DNVLASAPSPFHLYS*DIWCLHSKASEFSS Trigger: AGAGGAGAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAAGGGAGATGGAGCAGAAGCAAGGACGTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 90 bp | TCCCAAAGCCAGTTCTCTTCGGTGAGAATGGCAAGTGTTTTTCGTTaGATCAGATCCCAGCACCACCCGGAGTTCACTGCTACACCAAAG | + |
Preference number: 1 (lower is better) Translates to: SQSQFSSVRMASVFR*IRSQHHPEFTATPK Trigger: CTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGGATCTGATCCAACGAAAAACACTTGCCATTCTCACCGAAGAGAACTGGCTTTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 90 bp | GGAAAGTGTCCTTTAGTGAACTCTAGTAACGTGAAGGCTGTCACATaGACTTGGTTTCTATTTGTCCCAAGCAGGGCCCAGCCACAGGCC | + |
Preference number: 1 (lower is better) Translates to: GKCPLVNSSNVKAVT*TWFLFVPSRAQPQA Trigger: GGCCTGTGGCTGGGCCCTGCTTGGGACAAATAGAAACCAAGTTCATGTGACAGCCTTCACGTTACTAGAGTTCACTAAAGGACACTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 90 bp | CAAACTTCTAATACTGTGACACTTGAGTCCAGGACTCTGAAGAAATaGAAGGTCTCCAGGAGAAACACTGGAGGCATGCACTGCCCACCC | + |
Preference number: 1 (lower is better) Translates to: QTSNTVTLESRTLKK*KVSRRNTGGMHCPP Trigger: GGGTGGGCAGTGCATGCCTCCAGTGTTTCTCCTGGAGACCTTCCATTTCTTCAGAGTCCTGGACTCAAGTGTCACAGTATTAGAAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 90 bp | GCTACCATAAAACAATCCACCAGAGACCCACACTGCAGGACACCATaGCATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAA | + |
Preference number: 1 (lower is better) Translates to: ATIKQSTRDPHCRTP*HVHSQEASERAGTK Trigger: TTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCCTGCAGTGTGGGTCTCTGGTGGATTGTTTTATGGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 90 bp | GGAAGAAGGCTTATAAACTCATCACGAGGACAAAGCAACACCTTGTaGGCAAAGGAAAGGCACATCTCAGACTGGGGCAAACTTCTAATA | + |
Preference number: 1 (lower is better) Translates to: GRRLINSSRGQSNTL*AKERHISDWGKLLI Trigger: TATTAGAAGTTTGCCCCAGTCTGAGATGTGCCTTTCCTTTGCTCACAAGGTGTTGCTTTGTCCTCGTGATGAGTTTATAAGCCTTCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 90 bp | CAGACAGACACAATAAAATACCAATCTTTTAGGCCTGACTGGCATTaGAGAGGACACCTTCATACCAATGTTCTATCACATGGCAGTCCT | + |
Preference number: 1 (lower is better) Translates to: QTDTIKYQSFRPDWH*RGHLHTNVLSHGSP Trigger: AGGACTGCCATGTGATAGAACATTGGTATGAAGGTGTCCTCTTCAATGCCAGTCAGGCCTAAAAGATTGGTATTTTATTGTGTCTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR GCA 90 bp | CATCATTTAGGAAAACAAAGCATTACCGGAAGAGATGGAGTCATGTaGTCTTCATTAGCATTAACTGCCACTAATTGTTCTGTTCATGCA | + |
Preference number: 1 (lower is better) Translates to: HHLGKQSITGRDGVM*SSLALTATNCSVHA Trigger: TGCATGAACAGAACAATTAGTGGCAGTTAATGCTAATGAAGAGCACATGACTCCATCTCTTCCGGTAATGCTTTGTTTTCCTAAATGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR GCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGATTTTGGAGGCCCATGTaGAGAGGCCACACTATCTCC | + |
Preference number: 2 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRFWRPM*RGHTIS Trigger: GGAGATAGTGTGGCCTCTGCACATGGGCCTCCAAAA...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR TCA 90 bp | CACACTATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTGGGCCGGAGCATGGATCCAAGTGTACTaGGAATGTGCAAGTAGGTTT | + |
Preference number: 2 (lower is better) Translates to: HTISMTVCHHRAEAWAGAWIQVY*ECASRF Trigger: AAACCTACTTGCACATTCTCAGTACACTTGGATCCA...TGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR GCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACACACAGCCACTTGGGTaGATTCCTCACCAAGTGTGG | + |
Preference number: 2 (lower is better) Translates to: GHHDMFIAKKLLREQGPNTQPLG*IPHQVW Trigger: CCACACTTGGTGAGGAATGCACCCAAGTGGCTGTGT...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCCCACAGGCCACTTGTTaGTTTTCTGACTTGGCACTT | + |
Preference number: 2 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSPQATC*FSDLAL Trigger: AAGTGCCAAGTCAGAAAACCAACAAGTGGCCTGTGG...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 90 bp | GCAGCAGCACCTATGGGTTTTACCAGGATAAGACAGACAACGTCCTaGCTTCTGCTCCATCTCCCTTTCACCTCTACTCATGGGACATCT | + |
Preference number: 2 (lower is better) Translates to: AAAPMGFTRIRQTTS*LLLHLPFTSTHGTS Trigger: AGATGTCCCATGAGTAGAGGTGAAAGGGAGATGGAGCAGAAGCAAGGACGTTGTCTGTCTTATCCTGGTAAAACCCATAGGTGCTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCCAGCTATGTGCTAACTaGAGAAGAGAACTCCTCAGT | + |
Preference number: 2 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSQLCAN*RRELLS Trigger: ACTGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTG...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAAGGACTCTGAAGAAATaGAAGGTCTCCAGGAGAAAC | + |
Preference number: 2 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRRTLKK*KVSRRN Trigger: GTTTCTCCTGGAGACCTTCCATTTCTTCAGAGTCCT...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR TCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGACAGCCCACCAGTTCTaGCCCAGCTTGGAAACAGGT | + |
Preference number: 2 (lower is better) Translates to: IVFVKEQGGKKAYKLITRTAHQF*PSLETG Trigger: ACCTGTTTCCAAGCTGGGTCAGAACTGGTGGGCTGT...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR GCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACTCTGACTGGTGTCCCTaGCTTAATGTTTCTGGATTC | + |
Preference number: 2 (lower is better) Translates to: GHHDMFIAKKLLREQGPNSDWCP*LNVSGF Trigger: GAATCCAGAAACATTAAGGCAGGGACACCAGTCAGA...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CCA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCAGTTCTGACCCAGCTTaGAAACAGGTAGAAAGACAA | + |
Preference number: 2 (lower is better) Translates to: FHLYSWDIWCLHSKASEFSSDPA*KQVERQ Trigger: TTGTCTTTCTACCTGTTTCCAAGCTGGGTCAGAACT...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 90 bp | CCGCACAGGGAGAACTGTGAACATCACCGATCCATCACATTGTTTTaGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGA | + |
Preference number: 2 (lower is better) Translates to: PHRENCEHHRSITLF*LRSREGRRLINSSR Trigger: TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGTGATGGATCGGTGATGTTCACAGTTCTCCCTGTGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR GCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTCATGGGACATCTGGTaGCTCCACAGCAAAGCCAGT | + |
Preference number: 2 (lower is better) Translates to: IVFVKEQGGKKAYKLITRSWDIW*LHSKAS Trigger: ACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAACAACATCTACTAGCTaGCTTTATGCTGTCTCTATA | + |
Preference number: 2 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRTTSTS*LYAVSI Trigger: TATAGAGACAGCATAAAGCCAGCTAGTAGATGTTGT...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGTGTCAGAGTCTGACTaGTGTCCCTGCCTTAATGTT | + |
Preference number: 2 (lower is better) Translates to: TLFLLRSREGRRLINSSRVSESD*CPCLNV Trigger: AACATTAAGGCAGGGACACCAGTCAGACTCTGACAC...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 90 bp | GAGAACTCCTCAGTAGATGGAGAAAAATCTCGAGTTTTTAAAGCTTaGTGTCAGAGTCTGACTGGTGTCCCTGCCTTAATGTTTCTGGAT | + |
Preference number: 2 (lower is better) Translates to: ENSSVDGEKSRVFKA*CQSLTGVPALMFLD Trigger: ATCCAGAAACATTAAGGCAGGGACACCAGTCAGACTCTGACACAAAGCTTTAAAAACTCGAGATTTTTCTCCATCTACTGAGGAGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR GCA 90 bp | GACCCAGCTTGGAAACAGGTAGAAAGACAAATACGGAAGCCCGTTTATTCCATTAATTTCTCTTCTTACTaGAGTGTCTCCCAAGAAGAG | + |
Preference number: 2 (lower is better) Translates to: DPAWKQVERQIRKPVYSINFSSY*SVSQEE Trigger: CTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATT...AATGGAATAAACGGGCTTCCGTATTTGTCTTTCTACCTGTTTCCAAGCTGGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR GCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGATGCCCCATCTTCTGCTaGATAAATAGAAATCAGATT | + |
Preference number: 2 (lower is better) Translates to: TLFLLRSREGRRLINSSRCPIFC*INRNQI Trigger: AATCTGATTTCTATTTATGCAGCAGAAGATGGGGCA...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAAGTTCAGCAGCAACTTaGCCATTAAAAACATTCAAA | + |
Preference number: 2 (lower is better) Translates to: TLFLLRSREGRRLINSSRSSAAT*PLKTFK Trigger: TTTGAATGTTTTTAATGGCCAAGTTGCTGCTGAACT...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR GCA 72 bp | TGGAAGGTCTCCAGGAGAAACACTGGAGGCATGCACTaGCCACCCCATATGGCTTCAGTGTCCTCGGCTGCC | + |
Preference number: 3 (lower is better) Translates to: WKVSRRNTGGMH*PPHMASVSSAA Trigger: GGCAGCCGAGGACACTGAAGCCATATGGGGTGGGCAGTGCATGCCTCCAGTGTTTCTCCTGGAGACCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR GCA 72 bp | CCATCTCCCTTTCACCTCTACTCATGGGACATCTGGTaGCTCCACAGCAAAGCCAGTGAGTTCTCCTCTAGG | + |
Preference number: 3 (lower is better) Translates to: PSPFHLYSWDIW*LHSKASEFSSR Trigger: CCTAGAGGAGAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAAGGGAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 72 bp | GCTCCATCTCCCTTTCACCTCTACTCATGGGACATCTaGTGCCTCCACAGCAAAGCCAGTGAGTTCTCCTCT | + |
Preference number: 3 (lower is better) Translates to: APSPFHLYSWDI*CLHSKASEFSS Trigger: AGAGGAGAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAAGGGAGATGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 72 bp | GACTCTGAAGAAATGGAAGGTCTCCAGGAGAAACACTaGAGGCATGCACTGCCCACCCCATATGGCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: DSEEMEGLQEKH*RHALPTPYGFS Trigger: ACTGAAGCCATATGGGGTGGGCAGTGCATGCCTCCAGTGTTTCTCCTGGAGACCTTCCATTTCTTCAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CAA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCAGAAGAGCTGTCATTTaGCCTGGTACGTATACAGGG | + |
Preference number: 3 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSRRAVI*PGTYTG Trigger: CCCTGTATACGTACCAGGCAAAATGACAGCTCTTCT...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 72 bp | ATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTaGGCCGGAGCATCAAGTGTAGACATTTTGGATCCA | + |
Preference number: 3 (lower is better) Translates to: ISMTVCHHRAEA*AGASSVDILDP Trigger: TGGATCCAAAATGTCTACACTTGATGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 72 bp | CAGTTCTCTTCGGTGAGAATGGCAAGTGTTTTTCGTTaGATCAGATCCCAGCACCACCCGGAGTTCACTGCT | + |
Preference number: 3 (lower is better) Translates to: QFSSVRMASVFR*IRSQHHPEFTA Trigger: AGCAGTGAACTCCGGGTGGTGCTGGGATCTGATCCAACGAAAAACACTTGCCATTCTCACCGAAGAGAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CAA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAGGCTGTCACATGAACTaGGTTTCTATTTGTCCCAAG | + |
Preference number: 3 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRGCHMN*VSICPK Trigger: CTTGGGACAAATAGAAACCAAGTTCATGTGACAGCC...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 72 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTaGTGTAGTTACTTGAGATCATCTTACCAAACCCTA | + |
Preference number: 3 (lower is better) Translates to: PSTTRSSLLHQS*CSYLRSSYQTL Trigger: TAGGGTTTGGTAAGATGATCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | TTGCTAAACCTTACAAGAGAGGTAGTAAAATCCTGCTaGGAGCACAGCCCACCAGTTCTGACCCAGCTTGGA | + |
Preference number: 3 (lower is better) Translates to: LLNLTREVVKSC*EHSPPVLTQLG Trigger: TCCAAGCTGGGTCAGAACTGGTGGGCTGTGCTCTCAGCAGGATTTTACTACCTCTCTTGTAAGGTTTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | AAACAATCCACCAGAGACCCACACTGCAGGACACCATaGCATGTTCATAGCCAAGAAGCTTCTGAGAGAGCA | + |
Preference number: 3 (lower is better) Translates to: KQSTRDPHCRTP*HVHSQEASERA Trigger: TGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCCTGCAGTGTGGGTCTCTGGTGGATTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | GTCATATGGAAACCGCAGGTGTACACACAGAAGGGCTaGAATGTAGGAAATGCTAAGGAACAGGCGTTCCTA | + |
Preference number: 3 (lower is better) Translates to: VIWKPQVYTQKG*NVGNAKEQAFL Trigger: TAGGAACGCCTGTTCCTTAGCATTTCCTACATTTCAGCCCTTCTGTGTGTACACCTGCGGTTTCCATATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR GCA 72 bp | TCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTaGCTGGTACGTATACAGGGAGATATGCAAACCGTG | + |
Preference number: 3 (lower is better) Translates to: SYCSVSQEELSF*LVRIQGDMQTV Trigger: CACGGTTTGCATATCTCCCTGTATACGTACCAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 72 bp | ACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTaGTACGTATACAGGGAGATATGCAAACCGTGCTTT | + |
Preference number: 3 (lower is better) Translates to: TAVSPKKSCHFA*YVYREICKPCF Trigger: AAAGCACGGTTTGCATATCTCCCTGTATACGTACCAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | GAAAAAGACTGTCAAGGGAATCATAGGACAAAGGACTaGATTACTTTTGGAGGCCCATGTGCAGAGGCCACA | + |
Preference number: 3 (lower is better) Translates to: EKDCQGNHRTKD*ITFGGPCAEAT Trigger: TGTGGCCTCTGCACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGTCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | CTTATAAACTCATCACGAGGACAAAGCAACACCTTGTaGGCAAAGGAAAGGCACATCTCAGACTGGGGCAAA | + |
Preference number: 3 (lower is better) Translates to: LINSSRGQSNTL*AKERHISDWGK Trigger: TTTGCCCCAGTCTGAGATGTGCCTTTCCTTTGCTCACAAGGTGTTGCTTTGTCCTCGTGATGAGTTTATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | TGGTGTAGTTACTTGAGATCATCTTACCAAACCCTATaGGCACAAGTGCATCCGCACAGGGAGAACTGTGAA | + |
Preference number: 3 (lower is better) Translates to: WCSYLRSSYQTL*AQVHPHRENCE Trigger: TTCACAGTTCTCCCTGTGCGGATGCACTTGTGCTCATAGGGTTTGGTAAGATGATCTCAAGTAACTACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | GGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTaGGATCATCTTACCAAACCCTATGAGCACAAGTGC | + |
Preference number: 3 (lower is better) Translates to: GVHCYTKAGVVT*DHLTKPYEHKC Trigger: GCACTTGTGCTCATAGGGTTTGGTAAGATGATCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR-3UTR CAA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTACTTCCCAAAGCTCTTaGAAGGCGGAAGGAATTTCT | + |
Preference number: 3 (lower is better) Translates to: GKQSGCPIFCCINRNQIFTSQSS*KAEGIS Trigger: AGAAATTCCTTCCGCCTTCAAAGAGCTTTGGGAAGT...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR TCA 72 bp | CAGTTTGGAAAGGTAAGAGCTAGTTTTGTGATCCCCTaGTTTAGTACAAGTTCAGCAGCAACTTGGCCATTA | + |
Preference number: 3 (lower is better) Translates to: QFGKVRASFVIP*FSTSSAATWPL Trigger: TAATGGCCAAGTTGCTGCTGAACTTGTACTAAATCAGGGGATCACAAAACTAGCTCTTACCTTTCCAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR GCA 72 bp | GGAAAACAAAGCATTACCGGAAGAGATGGAGTCATGTaGTCTTCATTAGCATTAACTGCCACTAATTGTTCT | + |
Preference number: 3 (lower is better) Translates to: GKQSITGRDGVM*SSLALTATNCS Trigger: AGAACAATTAGTGGCAGTTAATGCTAATGAAGAGCACATGACTCCATCTCTTCCGGTAATGCTTTGTTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CCA 72 bp | ACATCATTTAGGAAAACAAAGCATTACCGGAAGAGATaGAGTCATGTGCTCTTCATTAGCATTAACTGCCAC | + |
Preference number: 3 (lower is better) Translates to: TSFRKTKHYRKR*SHVLFISINCH Trigger: GTGGCAGTTAATGCTAATGAAGAGCACATGACTCCATCTCTTCCGGTAATGCTTTGTTTTCCTAAATGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCGCCCCAGGCCCGCTGTaGGGCGCAGCACCCACAGCG | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSAPGPL*GAAPTA Trigger: CGCTGTGGGTGCTGCGCCTCACAGCGGGCCTGGGGC...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCCCCACCAGCTTCACCTaGGGCCGGCCGGGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSPTSFT*GRPGSS Trigger: GCTGCTGCCCGGCCGGCCGCAGGTGAAGCTGGTGGG...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGACACGTCGGTGGTGTTaGGCAGGCGGACCAGGCGCG | + |
Preference number: 4 (lower is better) Translates to: TVKGIIGQRTELLLEAHVTRRWC*AGGPGA Trigger: CGCGCCTGGTCCGCCTGCTCAACACCACCGACGTGT...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | CACACTATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTGGGCCGGAGCATGGCTGATGGGAGGATaGTGTTCCAGGAGGGATATT | + |
Preference number: 4 (lower is better) Translates to: HTISMTVCHHRAEAWAGAWLMGG*CSRRDI Trigger: AATATCCCTCCTGGAACACCATCCTCCCATCAGCCA...TGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTGCGGATCCAGTCGATaGGGGCGCGCACCTCCGGCA | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRCGSSR*GRAPPA Trigger: TGCCGGAGGTGCGCGCCCTCATCGACTGGATCCGCA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GACCTGAATAAGAGAAACCCCAGCTATGTGCTAACTGGAGAAGAGAACTCCTCATTGATGTGCGCCGCCTaGGCCGAGCTCCTCAGTAGC | + |
Preference number: 4 (lower is better) Translates to: DLNKRNPSYVLTGEENSSLMCAA*AELLSS Trigger: GCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAA...TGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTGGGGTTTCTCTTATTCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACTGGTGTCGTCAGTGCTaGTGCTATGCCCCCTGCCTT | + |
Preference number: 4 (lower is better) Translates to: GHHDMFIAKKLLREQGPNWCRQC*CYAPCL Trigger: AAGGCAGGGGGCATAGCACCAGCACTGACGACACCA...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 72 bp | CCAGTTCTCTTCGGTGAGAATGGCAAGTGTTTTTCGTaGGATCAGATCCCAGCACCACCCGGAGTTCACTGC | + |
Preference number: 4 (lower is better) Translates to: PVLFGENGKCFS*DQIPAPPGVHC Trigger: GCAGTGAACTCCGGGTGGTGCTGGGATCTGATCCAACGAAAAACACTTGCCATTCTCACCGAAGAGAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCGAACTGGCTGCATCATaGTGCACAAAGACCTGTGTG | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSELAAS*CTKTCV Trigger: CACACAGGTCTTTGTGCATCATGATGCAGCCAGTTC...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGTCAGCCTTCTTGATGTaGGCCGCCTGGGCCGAGCTC | + |
Preference number: 4 (lower is better) Translates to: TVKGIIGQRTELLLEAHVSAFLM*AAWAEL Trigger: GAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGA...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GACCTGAATAAGAGAAACCCCAGCTATGTGCTAACTGGAGAAGAGAACTCCTCATCGCCGGTGCTGAACTaGTCAGGGAAGCTGCGGTTG | + |
Preference number: 4 (lower is better) Translates to: DLNKRNPSYVLTGEENSSSPVLN*SGKLRL Trigger: CAACCGCAGCTTCCCTGACCAGTTCAGCACCGGCGA...TGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTGGGGTTTCTCTTATTCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | CACACTATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTGGGCCGGAGCACACAGCGATAGTTTCTaGTTGGGTAGGTTCTGTGAT | + |
Preference number: 4 (lower is better) Translates to: HTISMTVCHHRAEAWAGAHSDSF*LGRFCD Trigger: ATCACAGAACCTACCCAACCAGAAACTATCGCTGTG...TGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATAGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCACGCTCTCGCCCATCTaGATTCAGAGAGGGAACAAT | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSTLSPI*IQRGNN Trigger: ATTGTTCCCTCTCTGAATCCAGATGGGCGAGAGCGT...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGACCAACACCTGGCGTaGCACCGTCTCGTCGCCGTG | + |
Preference number: 4 (lower is better) Translates to: TLFLLRSREGRRLINSSRDQHLA*HRLVAV Trigger: CACGGCGACGAGACGGTGTCACGCCAGGTGTTGGTC...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAACCACTGAGCCACCATaGAGATTTCCAGAAAGCACA | + |
Preference number: 4 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRTTEPP*RFPEST Trigger: TGTGCTTTCTGGAAATCTTCATGGTGGCTCAGTGGT...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCTGTGTGCCCAGTCTTTaGGGTGCAGTCTTTCTCTTG | + |
Preference number: 4 (lower is better) Translates to: FHLYSWDIWCLHSKASEFCVPSL*GAVFLL Trigger: CAAGAGAAAGACTGCACCTCAAAGACTGGGCACACA...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAGGCAATGGCCATAGGTaGCACTATAATCCTTCATGC | + |
Preference number: 4 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRGNGHR*HYNPSC Trigger: GCATGAAGGATTATAGTGTCACCTATGGCCATTGCC...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAAGCAGATGCACCAAATaGTGCAAGCCGTTAGGATCA | + |
Preference number: 4 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRSRCTK*CKPLGS Trigger: TGATCCTAACGGCTTGCATCATTTGGTGCATCTGCT...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | GACCTGAATAAGAGAAACCCCAGCTATGTGCTAACTGGAGAAGAGAACTCCTCAACCGTCTCGTCGCCGTaGATGTTACCCACCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: DLNKRNPSYVLTGEENSSTVSSP*MLPTSF Trigger: GAAGCTGGTGGGTAACATGCACGGCGACGAGACGGT...TGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTGGGGTTTCTCTTATTCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGACATCATCTGGTGACTTaGTGTACGTGGCAACTCCTT | + |
Preference number: 4 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRHHLVT*CTWQLL Trigger: AAGGAGTTGCCACGTACAGCAAGTCACCAGATGATG...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCGGGTGGCATTTAATATaGCCCTACCATCTGTGGCAT | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSGWHLI*PYHLWH Trigger: ATGCCACAGATGGTAGGGGCATATTAAATGCCACCC...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACTCAGTGCTGGTGCTATaGCCCCTGCCTTTCTTTGAC | + |
Preference number: 4 (lower is better) Translates to: GHHDMFIAKKLLREQGPNSVLVL*PLPFFD Trigger: GTCAAAGAAAGGCAGGGGGCATAGCACCAGCACTGA...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGATACCAGCCACTGAAATaGTTGCGTTCTCTAACCCAG | + |
Preference number: 4 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRYQPLK*LRSLTQ Trigger: CTGGGTTAGAGAACGCAACCATTTCAGTGGCTGGTA...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 72 bp | TATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTaGGGCCGGAGCATCAAGTGTAGACATTTTGGATCC | + |
Preference number: 4 (lower is better) Translates to: YLHDSMPSQGRG*GRSIKCRHFGS Trigger: GGATCCAAAATGTCTACACTTGATGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCTCATCTCCTGGACAATaGGGTTCGCCAGTTTTCATT | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSSSPGQ*GSPVFI Trigger: AATGAAAACTGGCGAACCCCATTGTCCAGGAGATGA...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCAAATTCTGGTTCACCTaGTTCATGGACACCTGGGTT | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSKFWFT*FMDTWV Trigger: AACCCAGGTGTCCATGAACCAGGTGAACCAGAATTT...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCCAGTTCAGTTCCAACTaGAGCGTTTCCATGGATACC | + |
Preference number: 4 (lower is better) Translates to: FHLYSWDIWCLHSKASEFQFSSN*SVSMDT Trigger: GGTATCCATGGAAACGCTCCAGTTGGAACTGAACTG...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACGTGTCCGTTTCATCCTaGAACTCATGGCTTAGGAGG | + |
Preference number: 4 (lower is better) Translates to: GHHDMFIAKKLLREQGPNVSVSS*NSWLRR Trigger: CCTCCTAAGCCATGAGTTCCAGGATGAAACGGACAC...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 72 bp | CTTCCATCAACTAAGATCTCAACTTTACACAGCCACTaGGGTGCATTCCTCACCAAGTGTGGCCGAGTGACC | + |
Preference number: 4 (lower is better) Translates to: LPSTKISTLHSH*GAFLTKCGRVT Trigger: GGTCACTCGGCCACACTTGGTGAGGAATGCACCCAAGTGGCTGTGTAAAGTTGAGATCTTAGTTGATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGGTGCAGTCTTTCTCTTaGGCACGCTCTCGCCCATCT | + |
Preference number: 4 (lower is better) Translates to: TVKGIIGQRTELLLEAHVVQSFS*ARSRPS Trigger: AGATGGGCGAGAGCGTGCTCAAGAGAAAGACTGCAC...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCAAGCAGGTGGGTACTTaGAGCAAGACAATTCTAATG | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSKQVGT*SKTILM Trigger: CATTAGAATTGTCTTGCTGCAAGTACCCACCTGCTT...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | CACACTATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTGGGCCGGAGCAATCAGGATTCATGGATaGCATAAGGTGAATTCTTGT | + |
Preference number: 4 (lower is better) Translates to: HTISMTVCHHRAEAWAGAIRIHG*HKVNSC Trigger: ACAAGAATTCACCTTATGCCATCCATGAATCCTGAT...TGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCGCGATAGTTTCTGGTTaGGTAGGTTCTGTGATTGGA | + |
Preference number: 4 (lower is better) Translates to: FHLYSWDIWCLHSKASEFAIVSG*VGSVIG Trigger: TCCAATCACAGAACCTACCCAACCAGAAACTATCGC...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | CACACTATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTGGGCCGGAGCACAGTTCATTCTCAAATaGATATTTCACACAACCGAG | + |
Preference number: 4 (lower is better) Translates to: HTISMTVCHHRAEAWAGAQFILK*IFHTTE Trigger: CTCGGTTGTGTGAAATATCCATTTGAGAATGAACTG...TGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCTTGCTCCCAGTACTTTaGCAGTTCATTCTCAAATGG | + |
Preference number: 4 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSLLPVL*QFILKW Trigger: CCATTTGAGAATGAACTGCCAAAGTACTGGGAGCAA...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCAATTATTTGGGCAACTaGGCTGACCCATGTGCATTG | + |
Preference number: 4 (lower is better) Translates to: FHLYSWDIWCLHSKASEFNYLGN*ADPCAL Trigger: CAATGCACATGGGTCAGCCCAGTTGCCCAAATAATT...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACCAAGGACAAATCCTTTaGCACCCTGATGAACCTGTT | + |
Preference number: 4 (lower is better) Translates to: GHHDMFIAKKLLREQGPNQGQIL*HPDEPV Trigger: AACAGGTTCATCAGGGTGTCAAAGGATTTGTCCTTG...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACGAATCAAGTTTTCGATaGTGGCTTTGGTCTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: GHHDMFIAKKLLREQGPNESSFR*WLWSQA Trigger: AGCCTGAGACCAAAGCCATCATCGAAAACTTGATTC...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGTTTGGGCAACTGGGCTaGCCCATGTGCATTGATGGA | + |
Preference number: 4 (lower is better) Translates to: RNFSSYCSVSQEELSFCLFGQLG*PMCIDG Trigger: TCCATCAATGCACATGGGTCAGCCCAGTTGCCCAAA...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCAGGTATGTTCTCATCTaGATTATTTGGGCAACTGGG | + |
Preference number: 4 (lower is better) Translates to: FHLYSWDIWCLHSKASEFRYVLI*IIWATG Trigger: CCCAGTTGCCCAAATAATTCAGATGAGAACATACCT...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAGGAACAAGTAATCTGTaGAAATCACCAAATCTTCCC | + |
Preference number: 4 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRGTSNL*KSPNLP Trigger: GGGAAGATTTGGTGATTTCCACAGATTACTTGTTCC...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGGAGCTGAGCTGCACTTaGGAAGTAGCAGCAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: TVKGIIGQRTELLLEAHVELSCT*EVAAAC Trigger: ACAAGCTGCTGCTACTTCCCAAGTGCAGCTCAGCTC...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGCCGTGGACTCCTTTGTaGACCTCCACCAGCATGCTA | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRPWTPL*TSTSML Trigger: TAGCATGCTGGTGGAGGTCCACAAAGGAGTCCACGG...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTGCTGCCGCAGCCGGTaGAAGCCATCTTTGTGTCTA | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRCCRSR*KPSLCL Trigger: TAGACACAAAGATGGCTTCCACCGGCTGCGGCAGCA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGCTCGGGCAGATGCTGTaGTTTTGTATGTCCCTGGGA | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRLGQML*FCMSLG Trigger: TCCCAGGGACATACAAAATCACAGCATCTGCCCGAG...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACCTTCTTAGAGCCAGTTaGCATCATGCGAATTTCATC | + |
Preference number: 4 (lower is better) Translates to: GHHDMFIAKKLLREQGPNLLRAS*HHANFI Trigger: GATGAAATTCGCATGATGTCAACTGGCTCTAAGAAG...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGGCCCAGTCTTTGAGGTaGAGTCTTTCTCTTGAGCAC | + |
Preference number: 4 (lower is better) Translates to: RNFSSYCSVSQEELSFCLAQSLR*SLSLEH Trigger: GTGCTCAAGAGAAAGACTGCACCTCAAAGACTGGGC...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | GACCCAGCTTGGAAACAGGTAGAAAGACAAATACGGAAGCCCGTTTATTCCATTCACTATAATCCTTCATaGTGCCCAGGTGACTGTGCC | + |
Preference number: 4 (lower is better) Translates to: DPAWKQVERQIRKPVYSIHYNPS*CPGDCA Trigger: GGCACAGTCACCTGGGCAGCATGAAGGATTATAGTG...AATGGAATAAACGGGCTTCCGTATTTGTCTTTCTACCTGTTTCCAAGCTGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAATTGAGTACAATGACTaGTTTCGAGATTGGTTTACC | + |
Preference number: 4 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRIEYND*FRDWFT Trigger: GGTAAACCAATCTCGAAAGCAGTCATTGTACTCAAT...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 72 bp | CCTATGGGTTTTACCAGGATAAGACAGACAACGTCCTaGCTTCTGCTCCATCTCCCTTTCACCTCTACTCAT | + |
Preference number: 4 (lower is better) Translates to: PMGFTRIRQTTS*LLLHLPFTSTH Trigger: ATGAGTAGAGGTGAAAGGGAGATGGAGCAGAAGCAAGGACGTTGTCTGTCTTATCCTGGTAAAACCCATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACAAGACAATTCTAATGTaGTCTCAAAACAGTTGGCCC | + |
Preference number: 4 (lower is better) Translates to: GHHDMFIAKKLLREQGPNKTILM*SQNSWP Trigger: GGGCCAACTGTTTTGAGATCACATTAGAATTGTCTT...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGCATTCTTGTCGAAGCTaGGAAGCAGGTGGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRHSCRS*EAGGYL Trigger: CAAGTACCCACCTGCTTCTCAGCTTCGACAAGAATG...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTTTCTGCCAACTACACTaGTCGAATCTCCTTCCTGGG | + |
Preference number: 4 (lower is better) Translates to: GKQSGCPIFCCINRNQIFFCQLH*SNLLPG Trigger: CCCAGGAAGGAGATTCGATCAGTGTAGTTGGCAGAA...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTACAGCATCATCTGGTaGCTTGCTGTACGTGGCAAC | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRYSIIW*LAVRGN Trigger: GTTGCCACGTACAGCAAGTCACCAGATGATGCTGTA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GACCCAGCTTGGAAACAGGTAGAAAGACAAATACGGAAGCCCGTTTATTCCATTAGCTTGTGTATACCGTaGTTTCTGGGCAATGGCCAT | + |
Preference number: 4 (lower is better) Translates to: DPAWKQVERQIRKPVYSISLCIP*FLGNGH Trigger: ATGGCCATTGCCCAGAAATCACGGTATACACAAGCT...AATGGAATAAACGGGCTTCCGTATTTGTCTTTCTACCTGTTTCCAAGCTGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAAAGACCTGTGTGTGCTaGTGCTGGTACCCATCAGCA | + |
Preference number: 4 (lower is better) Translates to: TLFLLRSREGRRLINSSRKTCVC*CWYPSA Trigger: TGCTGATGGGTACCAGCAGCAGCACACACAGGTCTT...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGGTCTTTAGGCTGAATTaGCTGATGGGAGGATGGTGT | + |
Preference number: 4 (lower is better) Translates to: RNFSSYCSVSQEELSFCLVFRLN*LMGGWC Trigger: ACACCATCCTCCCATCAGCCAATTCAGCCTAAAGAC...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GACCTGAATAAGAGAAACCCCAGCTATGTGCTAACTGGAGAAGAGAACTCCTCAACTGGAGCGTTTCCATaGATACCAGCAACAAAACGA | + |
Preference number: 4 (lower is better) Translates to: DLNKRNPSYVLTGEENSSTGAFP*IPATKR Trigger: TCGTTTTGTTGCTGGTATCCATGGAAACGCTCCAGT...TGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTGGGGTTTCTCTTATTCAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGGTATACCGTGATTTCTaGGCAATGGCCATAGGTGAC | + |
Preference number: 4 (lower is better) Translates to: RNFSSYCSVSQEELSFCLVYRDF*AMAIGD Trigger: GTCACCTATGGCCATTGCCCAGAAATCACGGTATAC...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 72 bp | TTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTaGCCTGGTACGTATACAGGGAGATATGCAAACCGT | + |
Preference number: 4 (lower is better) Translates to: FLLQCLPRRAVI*PGTYTGRYANR Trigger: ACGGTTTGCATATCTCCCTGTATACGTACCAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTAGGACGAGCTTAACATaGAGCCTTCCAAGCCATTCT | + |
Preference number: 4 (lower is better) Translates to: GKQSGCPIFCCINRNQIFRTSLT*SLPSHS Trigger: AGAATGGCTTGGAAGGCTTCATGTTAAGCTCGTCCT...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGGCTTTGGTCTCAGGCTaGGAAGCATTACTTGTAAAG | + |
Preference number: 4 (lower is better) Translates to: RNFSSYCSVSQEELSFCLALVSG*EALLVK Trigger: CTTTACAAGTAATGCTTCTCAGCCTGAGACCAAAGC...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGTACCACAGAACTGGCTaGATCATGATGCACAAAGAC | + |
Preference number: 4 (lower is better) Translates to: TVKGIIGQRTELLLEAHVYHRTG*IMMHKD Trigger: GTCTTTGTGCATCATGATGCAGCCAGTTCTGTGGTA...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTAAGCTGAGAAGCAGGTaGGTACTTGCAGCAAGACAA | + |
Preference number: 4 (lower is better) Translates to: GKQSGCPIFCCINRNQIFKLRSR*VLAARQ Trigger: TTGTCTTGCTGCAAGTACCCACCTGCTTCTCAGCTT...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GACCCAGCTTGGAAACAGGTAGAAAGACAAATACGGAAGCCCGTTTATTCCATTGTCCTGTCAACCAATTaGGTAACAACTGGGTTCCTT | + |
Preference number: 4 (lower is better) Translates to: DPAWKQVERQIRKPVYSIVLSTN*VTTGFL Trigger: AAGGAACCCAGTTGTTACCCAATTGGTTGACAGGAC...AATGGAATAAACGGGCTTCCGTATTTGTCTTTCTACCTGTTTCCAAGCTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGTACCACGAGTTCCCTTaGCAAACCAAATATCCGGTT | + |
Preference number: 4 (lower is better) Translates to: TVKGIIGQRTELLLEAHVYHEFP*QTKYPV Trigger: AACCGGATATTTGGTTTGCCAAGGGAACTCGTGGTA...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGTCATCCTGGAACTCATaGCTTAGGAGGGACTTCTTA | + |
Preference number: 4 (lower is better) Translates to: RNFSSYCSVSQEELSFCLSSWNS*LRRDFL Trigger: TAAGAAGTCCCTCCTAAGCCATGAGTTCCAGGATGA...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGCCCGTTGTGATGTTATaGTTAATACCAGCCACTGAA | + |
Preference number: 4 (lower is better) Translates to: TVKGIIGQRTELLLEAHVPVVML*LIPATE Trigger: TTCAGTGGCTGGTATTAATCATAACATCACAACGGG...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAATACCCTCGGGCAGATaGTGTGATTTTGTATGTCCC | + |
Preference number: 4 (lower is better) Translates to: TLFLLRSREGRRLINSSRIPSGR*CDFVCP Trigger: GGGACATACAAAATCACAGCATCTGCCCGAGGGTAT...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GACCCAGCTTGGAAACAGGTAGAAAGACAAATACGGAAGCCCGTTTATTCCATTATATGTTGGGCTTATTaGAGATCTCCAGGGACCAAA | + |
Preference number: 4 (lower is better) Translates to: DPAWKQVERQIRKPVYSIICWAY*RSPGTK Trigger: TTTGGTCCCTGGAGATCTCCAATAAGCCCAACATAT...AATGGAATAAACGGGCTTCCGTATTTGTCTTTCTACCTGTTTCCAAGCTGGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 72 bp | GAGAACTGTGAACATCACCGATCCATCACATTGTTTTaGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAAC | + |
Preference number: 4 (lower is better) Translates to: ENCEHHRSITLF*LRSREGRRLIN Trigger: GTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGTGATGGATCGGTGATGTTCACAGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTTCCAGGTCTTTGCCATaGGCATTTGTGTGCCCAGTC | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSSRSLP*AFVCPV Trigger: GACTGGGCACACAAATGCTCATGGCAAAGACCTGGA...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTAGGCAATGGAAAGACTaGAGTCCTGCTTTTGAATCA | + |
Preference number: 4 (lower is better) Translates to: GKQSGCPIFCCINRNQIFRQWKD*SPAFES Trigger: TGATTCAAAAGCAGGACTTCAGTCTTTCCATTGCCT...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGAGTCCAGTGGTCTTATaGTCGGGAGAATCATCAAAA | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRSPVVL*SGESSK Trigger: TTTTGATGATTCTCCCGAGCATAAGACCACTGGACT...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTCTCGTCTTCATCTCCTaGACAATGGGGTTCGCCAGT | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSLVFIS*TMGFAS Trigger: ACTGGCGAACCCCATTGTCCAGGAGATGAAGACGAG...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTGGTTCATGGACACCTaGGTTATCAGATATCTCCAT | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRWFMDT*VIRYLH Trigger: ATGGAGATATCTGATAACCCAGGTGTCCATGAACCA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGATCGAATCTCCTTCCTaGGACTTTTCATATCCATCA | + |
Preference number: 4 (lower is better) Translates to: RNFSSYCSVSQEELSFCLIESPS*DFSYPS Trigger: TGATGGATATGAAAAGTCCCAGGAAGGAGATTCGAT...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTTGCAAGGTCTACCTTaGAACATCTGCGAATTTTCC | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRLQGLP*NICEFS Trigger: GGAAAATTCGCAGATGTTCCAAGGTAGACCTTGCAA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GACCCAGCTTGGAAACAGGTAGAAAGACAAATACGGAAGCCCGTTTATTCCATTAAGTCTTTGTATGAATaGTATCGATACAGAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: DPAWKQVERQIRKPVYSIKSLYE*YRYRAR Trigger: CCTGGCTCTGTATCGATACCATTCATACAAAGACTT...AATGGAATAAACGGGCTTCCGTATTTGTCTTTCTACCTGTTTCCAAGCTGGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTGAAAGTGCTATTTGCTaGAATACAGCATCATCTGGT | + |
Preference number: 4 (lower is better) Translates to: GKQSGCPIFCCINRNQIFESAIC*NTASSG Trigger: ACCAGATGATGCTGTATTTCAGCAAATAGCACTTTC...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTCCCCCTGCCTTTCTTTaGCTCATTGTTTGCATCTGC | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSPPAFL*LIVCIC Trigger: GCAGATGCAAACAATGAGTCAAAGAAAGGCAGGGGG...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GACCTGAATAAGAGAAACCCCAGCTATGTGCTAACTGGAGAAGAGAACTCCTCAAATATACTTAAATTCTaGTTCACCTGGTTCATGGAC | + |
Preference number: 4 (lower is better) Translates to: DLNKRNPSYVLTGEENSSNILKF*FTWFMD Trigger: GTCCATGAACCAGGTGAACCAGAATTTAAGTATATT...TGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTGGGGTTTCTCTTATTCAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTTCCACTGTCTGCACTaGTTTATCATACGGATATGT | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRFHCLH*FIIRIC Trigger: ACATATCCGTATGATAAACCAGTGCAGACAGTGGAA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGACTATTACCACAGAACTaGCTGCATCATGATGCACAA | + |
Preference number: 4 (lower is better) Translates to: TLFLLRSREGRRLINSSRLLPQN*LHHDAQ Trigger: TTGTGCATCATGATGCAGCCAGTTCTGTGGTAATAG...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTATAGCTTGCTACCACTaGGCCACCATGAAGATTTCC | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSIACYH*ATMKIS Trigger: GGAAATCTTCATGGTGGCTCAGTGGTAGCAAGCTAT...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTATGGATGGCATAAGGTaGATTCTTGTGCTGCGAACC | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSMDGIR*ILVLRT Trigger: GGTTCGCAGCACAAGAATTCACCTTATGCCATCCAT...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTGGTTCACCTGGTTCATaGACACCTGGGTTATCAGAT | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSGSPGS*TPGLSD Trigger: ATCTGATAACCCAGGTGTCCATGAACCAGGTGAACC...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTCAATTGGGTAACAACTaGGTTCCTTTTGTAATTCAG | + |
Preference number: 4 (lower is better) Translates to: GKQSGCPIFCCINRNQIFQLGNN*VPFVIQ Trigger: CTGAATTACAAAAGGAACCCAGTTGTTACCCAATTG...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAAGAGGCATAAGCTTTTaGCAAGTATCTAAAGACTTC | + |
Preference number: 4 (lower is better) Translates to: TLFLLRSREGRRLINSSRRGISF*QVSKDF Trigger: GAAGTCTTTAGATACTTGGCAAAAGCTTATGCCTCT...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR GCA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGAGCCAGTTGACATCATaGGAATTTCATCTTCATATT | + |
Preference number: 4 (lower is better) Translates to: IVFVKEQGGKKAYKLITRSQLTS*EFHLHI Trigger: AATATGAAGATGAAATTCGCATGATGTCAACTGGCT...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGATTTGTAAGTGGTCACTaGGTGATTAATTTCAGCAAC | + |
Preference number: 4 (lower is better) Translates to: TLFLLRSREGRRLINSSRFVSGH*VINFSN Trigger: GTTGCTGAAATTAATCACCCAGTGACCACTTACAAA...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTTGCAGAGGTATTCAATaGGATTCAATAGCAGCTCTC | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSCRGIQ*DSIAAL Trigger: GAGAGCTGCTATTGAATCTCATTGAATACCTCTGCA...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTATTGTTTGCATCTGCTaGAGATCGAACAAGGGTGAA | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSIVCIC*RSNKGE Trigger: TTCACCCTTGTTCGATCTTCAGCAGATGCAAACAAT...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGACCTTTAATTCCAATGTaGACCTTTTCAATCAATGTG | + |
Preference number: 4 (lower is better) Translates to: TLFLLRSREGRRLINSSRPLIPM*TFSINV Trigger: CACATTGATTGAAAAGGTCCACATTGGAATTAAAGG...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTCAGGTTCTGATATGTTaGGCTTATTGGAGATCTCCA | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSQVLIC*AYWRSP Trigger: TGGAGATCTCCAATAAGCCCAACATATCAGAACCTG...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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3UTR CAA 72 bp | AGTGAGTTCTCCTCTAGGATAAAGATATCTAGAACTTaGCTAAACCTTACAAGAGAGGTAGTAAAATCCTGC | + |
Preference number: 4 (lower is better) Translates to: SEFSSRIKISRT*LNLTREVVKSC Trigger: GCAGGATTTTACTACCTCTCTTGTAAGGTTTAGCAAAGTTCTAGATATCTTTATCCTAGAGGAGAACTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR TCA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTCCGTTTGTTATCCCATaGGGAAAATACTCATTGAGA | + |
Preference number: 4 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSPFVIP*GKYSLR Trigger: TCTCAATGAGTATTTTCCTCATGGGATAACAAACGG...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 90 bp | CGTGACACCGTCTCGTCGCCGTGCATGTTACCCACCAGCTTCACCTaGGGCCGGCCGGGCAGCAGCGGCCCCGCGGCGTCCAGCCCCGCG | + |
Preference number: 5 (lower is better) Translates to: RDTVSSPCMLPTSFT*GRPGSSGPAASSPA Trigger: CGCGGGGCTGGACGCCGCGGGGCCGCTGCTGCCCGGCCGGCCGCAGGTGAAGCTGGTGGGTAACATGCACGGCGACGAGACGGTGTCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | AGCCATCCGGGTTCAGGCTGGGCAGCAAATACACGTCGGTGGTGTTaGGCAGGCGGACCAGGCGCGGGTCCCCGCGGCGGTAGCCCGACG | + |
Preference number: 5 (lower is better) Translates to: SHPGSGWAANTRRWC*AGGPGAGPRGGSPT Trigger: CGTCGGGCTACCGCCGCGGGGACCCGCGCCTGGTCCGCCTGCTCAACACCACCGACGTGTATTTGCTGCCCAGCCTGAACCCGGATGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | CCGCCTCGGAGCCGCCAACGGTTGTCGTGGTCGCCTCAGCCTTCTTaGTGTGCGCCGCCTGGGCCGAGCTCCTCAGTAGCAGCAGCAGCA | + |
Preference number: 5 (lower is better) Translates to: PPRSRQRLSWSPQPS*CAPPGPSSSVAAAA Trigger: TGCTGCTGCTGCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGACAACCGTTGGCGGCTCCGAGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 90 bp | TCGGAGCCGCCAACGGTTGTCGTGGTCGCCTCAGCCTTCTTGATGTaGGCCGCCTGGGCCGAGCTCCTCAGTAGCAGCAGCAGCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: SEPPTVVVVASAFLM*AAWAELLSSSSSSS Trigger: GCTGCTGCTGCTGCTGCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGACAACCGTTGGCGGCTCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | CCAACGGTTGTCGTGGTCGCCTCAGCCTTCTTGATGTGCGCCGCCTaGGCCGAGCTCCTCAGTAGCAGCAGCAGCAGCAGCAGCGGTGGC | + |
Preference number: 5 (lower is better) Translates to: PTVVVVASAFLMCAA*AELLSSSSSSSSGG Trigger: GCCACCGCTGCTGCTGCTGCTGCTGCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGACAACCGTTGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | GTAGCCCGACGCCAGCTCGCGGGCCAGGTAGACCAACACCTGGCGTaGCACCGTCTCGTCGCCGTGCATGTTACCCACCAGCTTCACCTG | + |
Preference number: 5 (lower is better) Translates to: VARRQLAGQVDQHLA*HRLVAVHVTHQLHL Trigger: CAGGTGAAGCTGGTGGGTAACATGCACGGCGACGAGACGGTGTCACGCCAGGTGTTGGTCTACCTGGCCCGCGAGCTGGCGTCGGGCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | ACCTCCGGCACCTCATCCAGGGAAGGTGGCTCGCCGGTGCTGAACTaGTCAGGGAAGCTGCGGTTGAGGTCGCGGCCTCGGCTGTTGTCA | + |
Preference number: 5 (lower is better) Translates to: TSGTSSREGGSPVLN*SGKLRLRSRPRLLS Trigger: TGACAACAGCCGAGGCCGCGACCTCAACCGCAGCTTCCCTGACCAGTTCAGCACCGGCGAGCCACCTTCCCTGGATGAGGTGCCGGAGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | GAAGATTTCCAGAAAGCACAAACTTGTTCCTGCGGATCCAGTCGATaGGGGCGCGCACCTCCGGCACCTCATCCAGGGAAGGTGGCTCGC | + |
Preference number: 5 (lower is better) Translates to: EDFQKAQTCSCGSSR*GRAPPAPHPGKVAR Trigger: GCGAGCCACCTTCCCTGGATGAGGTGCCGGAGGTGCGCGCCCTCATCGACTGGATCCGCAGGAACAAGTTTGTGCTTTCTGGAAATCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAGGTGCAGTCTTTCTCTaGAGCACGCTCTCGCCCATC | + |
Preference number: 5 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRGAVFL*STLSPI Trigger: GATGGGCGAGAGCGTGCTCAAGAGAAAGACTGCACC...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | ATCATAAGGGTAGTTAACCACCAGGGAACCCCCGTGCAGATTGGCTaGCAGCACAAACGGGTAGGCCTTCACCCAGCTCATCACAGCGAT | + |
Preference number: 5 (lower is better) Translates to: IIRVVNHQGTPVQIG*QHKRVGLHPAHHSD Trigger: ATCGCTGTGATGAGCTGGGTGAAGGCCTACCCGTTTGTGCTGTCAGCCAATCTGCACGGGGGTTCCCTGGTGGTTAACTACCCTTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | CACACTATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTGGGCCGGAGCAGCCCCCTGCCTTTCTTaGACTCATTGTTTGCATCTG | + |
Preference number: 5 (lower is better) Translates to: HTISMTVCHHRAEAWAGAAPCLS*THCLHL Trigger: CAGATGCAAACAATGAGTCAAAGAAAGGCAGGGGGC...TGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATAGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACGGAGCTGAGCTGCACTaGGGAAGTAGCAGCAGCTTG | + |
Preference number: 5 (lower is better) Translates to: GHHDMFIAKKLLREQGPNGAELH*GSSSSL Trigger: CAAGCTGCTGCTACTTCCCAAGTGCAGCTCAGCTCC...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | GTCTGTGTCCAGGTCTTTGCCATGAGCATTTGTGTGCCCAGTCTTTaGGGTGCAGTCTTTCTCTTGAGCACGCTCTCGCCCATCTGGATT | + |
Preference number: 5 (lower is better) Translates to: VCVQVFAMSICVPSL*GAVFLLSTLSPIWI Trigger: AATCCAGATGGGCGAGAGCGTGCTCAAGAGAAAGACTGCACCTCAAAGACTGGGCACACAAATGCTCATGGCAAAGACCTGGACACAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGACTAAGGAGAGACTTCTaGTTCTCTGCCCATAGGGCA | + |
Preference number: 5 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRLRRDF*FSAHRA Trigger: TGCCCTATGGGCAGAGAACAAGAAGTCTCTCCTTAG...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | CAAAGACCTGTGTGTGCTGCTGCTGGTACCCATCAGCAATTGCGTTaGTGTTATGGACTCCAGGAGCTAGGAGCACATGGAAATAACCCC | + |
Preference number: 5 (lower is better) Translates to: QRPVCAAAGTHQQLR*CYGLQELGAHGNNP Trigger: GGGGTTATTTCCATGTGCTCCTAGCTCCTGGAGTCCATAACATCAACGCAATTGCTGATGGGTACCAGCAGCAGCACACACAGGTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCAGCGATAGTTTCTGGTaGGGTAGGTTCTGTGATTGG | + |
Preference number: 5 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSSDSFW*GRFCDW Trigger: CCAATCACAGAACCTACCCAACCAGAAACTATCGCT...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | CGCGCCATTCGTGATCCCATCTTTGAAAGTCTCGTCTTCATCTCCTaGACAATGGGGTTCGCCAGTTTTCATTATAGGGTGGTTAGAGGC | + |
Preference number: 5 (lower is better) Translates to: RAIRDPIFESLVFIS*TMGFASFHYRVVRG Trigger: GCCTCTAACCACCCTATAATGAAAACTGGCGAACCCCATTGTCCAGGAGATGAAGACGAGACTTTCAAAGATGGGATCACGAATGGCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | ATGGTGGTGGTGAAAGTCTTTAGGCTGAATTGGCTGATGGGAGGATaGTGTTCCAGGAGGGATATTAGGAACAGCAACTGTGCCAGGAGT | + |
Preference number: 5 (lower is better) Translates to: MVVVKVFRLNWLMGG*CSRRDIRNSNCARS Trigger: ACTCCTGGCACAGTTGCTGTTCCTAATATCCCTCCTGGAACACCATCCTCCCATCAGCCAATTCAGCCTAAAGACTTTCACCACCACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | AGCTGCACTTGGGAAGTAGCAGCAGCTTGTGTATACCGTGATTTCTaGGCAATGGCCATAGGTGACACTATAATCCTTCATGCTGCCCAG | + |
Preference number: 5 (lower is better) Translates to: SCTWEVAAACVYRDF*AMAIGDTIILHAAQ Trigger: CTGGGCAGCATGAAGGATTATAGTGTCACCTATGGCCATTGCCCAGAAATCACGGTATACACAAGCTGCTGCTACTTCCCAAGTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | CACACTATCTCCATGACAGTATGCCATCACAGGGCAGAGGCTTGGGCCGGAGCATACATAATTGTAATCTaGCATACCACCTTCCACGTC | + |
Preference number: 5 (lower is better) Translates to: HTISMTVCHHRAEAWAGAYIIVI*HTTFHV Trigger: GACGTGGAAGGTGGTATGCAAGATTACAATTATGTA...TGCTCCGGCCCAAGCCTCTGCCCTGTGATGGCATACTGTCATGGAGATAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGAATTATTCTCCCATTCTaGTCGAAGCTGAGAAGCAGG | + |
Preference number: 5 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRIILPF*SKLRSR Trigger: CCTGCTTCTCAGCTTCGACAAGAATGGGAGAATAAT...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | CCCAGCACCACCCGGAGTTCACTGCTACACCAAAGCTGGTGTAGTTACTTGAGACGGTTTAGGTCAAAGTaGTTGCTGTTGTTTCTGCCA | + |
Preference number: 5 (lower is better) Translates to: PSTTRSSLLHQSWCSYLRRFRSK*LLLFLP Trigger: TGGCAGAAACAACAGCAACAACTTTGACCTAAACCG...TCTCAAGTAACTACACCAGCTTTGGTGTAGCAGTGAACTCCGGGTGGTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | ATTGGTTTACCAGCCTTGTCTTTTACTAACCCGTGGACTCCTTTGTaGACCTCCACCAGCATGCTAAGGAGAGACTTCTTGTTCTCTGCC | + |
Preference number: 5 (lower is better) Translates to: IGLPALSFTNPWTPL*TSTSMLRRDFLFSA Trigger: GGCAGAGAACAAGAAGTCTCTCCTTAGCATGCTGGTGGAGGTCCACAAAGGAGTCCACGGGTTAGTAAAAGACAAGGCTGGTAAACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | ACTGCTTTCGAGATTGGTTTACCAGCCTTGTCTTTTACTAACCCGTaGACTCCTTTGTGGACCTCCACCAGCATGCTAAGGAGAGACTTC | + |
Preference number: 5 (lower is better) Translates to: TAFEIGLPALSFTNP*TPLWTSTSMLRRDF Trigger: GAAGTCTCTCCTTAGCATGCTGGTGGAGGTCCACAAAGGAGTCCACGGGTTAGTAAAAGACAAGGCTGGTAAACCAATCTCGAAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCTTGTTACAGCCTCAGTaGAACCAGGCATTACTGACA | + |
Preference number: 5 (lower is better) Translates to: FHLYSWDIWCLHSKASEFLLQPQ*NQALLT Trigger: TGTCAGTAATGCCTGGTTCAACTGAGGCTGTAACAA...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCCTTGCAAGGTCTACCTaGGAACATCTGCGAATTTTC | + |
Preference number: 5 (lower is better) Translates to: FHLYSWDIWCLHSKASEFLARST*EHLRIF Trigger: GAAAATTCGCAGATGTTCCAAGGTAGACCTTGCAAG...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GACCTGAATAAGAGAAACCCCAGCTATGTGCTAACTGGAGAAGAGAACTCCTCACTGACGGTCACGTTCTaGGTGACAGGGTTATACCCT | + |
Preference number: 5 (lower is better) Translates to: DLNKRNPSYVLTGEENSSLTVTF*VTGLYP Trigger: AGGGTATAACCCTGTCACCAAGAACGTGACCGTCAG...TGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTGGGGTTTCTCTTATTCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | TCTGCCAGAGCCAAGAGCAGTTCAGTTCCAACTGGAGCGTTTCCATaGATACCAGCAACAAAACGAATCTTCGGTTCTTCAGGTTCTGAT | + |
Preference number: 5 (lower is better) Translates to: SARAKSSSVPTGAFP*IPATKRIFGSSGSD Trigger: ATCAGAACCTGAAGAACCGAAGATTCGTTTTGTTGCTGGTATCCATGGAAACGCTCCAGTTGGAACTGAACTGCTCTTGGCTCTGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | CAGGCAAAGAAATTCTGCCAGAGCCAAGAGCAGTTCAGTTCCAACTaGAGCGTTTCCATGGATACCAGCAACAAAACGAATCTTCGGTTC | + |
Preference number: 5 (lower is better) Translates to: QAKKFCQSQEQFSSN*SVSMDTSNKTNLRF Trigger: GAACCGAAGATTCGTTTTGTTGCTGGTATCCATGGAAACGCTCCAGTTGGAACTGAACTGCTCTTGGCTCTGGCAGAATTTCTTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTTACACGTCGGTGGTGTaGAGCAGGCGGACCAGGCGC | + |
Preference number: 5 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSYTSVV*SRRTRR Trigger: GCGCCTGGTCCGCCTGCTCAACACCACCGACGTGTA...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACTCACATACAGTTCTCTaGACTCTACGGATTTCCCCA | + |
Preference number: 5 (lower is better) Translates to: GHHDMFIAKKLLREQGPNSHTVL*TLRISP Trigger: TGGGGAAATCCGTAGAGTCAAGAGAACTGTATGTGA...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GGACACCATGACATGTTCATAGCCAAGAAGCTTCTGAGAGAGCAGGGACCAAACATTGGTTTACCAGCCTaGTCTTTTACTAACCCGTGG | + |
Preference number: 5 (lower is better) Translates to: GHHDMFIAKKLLREQGPNIGLPA*SFTNPW Trigger: CCACGGGTTAGTAAAAGACAAGGCTGGTAAACCAAT...GTTTGGTCCCTGCTCTCTCAGAAGCTTCTTGGCTATGAACATGTCATGGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGCAGCCACTGAAATGGTaGCGTTCTCTAACCCAGAGC | + |
Preference number: 5 (lower is better) Translates to: IVFVKEQGGKKAYKLITRQPLKW*RSLTQS Trigger: GCTCTGGGTTAGAGAACGCAACCATTTCAGTGGCTG...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGCTTTGCCATGAGCATTaGTGTGCCCAGTCTTTGAGG | + |
Preference number: 5 (lower is better) Translates to: RNFSSYCSVSQEELSFCLLCHEH*CAQSLR Trigger: CCTCAAAGACTGGGCACACAAATGCTCATGGCAAAG...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ATGCTGGGGACAGGTGGAAATGAATGGAGTATTGAGCCGTGGTTCCTGGTGAGCACTGAAGTCCTGCTTTaGAATCAAGTTTTCGATGAT | + |
Preference number: 5 (lower is better) Translates to: MLGTGGNEWSIEPWFLVSTEVLL*NQVFDD Trigger: ATCATCGAAAACTTGATTCAAAAGCAGGACTTCAGT...GCTCACCAGGAACCACGGCTCAATACTCCATTCATTTCCACCTGTCCCCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 90 bp | TTGGGTAACAACTGGGTTCCTTTTGTAATTCAGGCAAAGAAATTCTaGCAGAGCCAAGAGCAGTTCAGTTCCAACTGGAGCGTTTCCATG | + |
Preference number: 5 (lower is better) Translates to: LGNNWVPFVIQAKKF*QSQEQFSSNWSVSM Trigger: CATGGAAACGCTCCAGTTGGAACTGAACTGCTCTTGGCTCTGGCAGAATTTCTTTGCCTGAATTACAAAAGGAACCCAGTTGTTACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 90 bp | AAATATCCGGTTATCTGTATCAAAGACTATTACCACAGAACTGGCTaGATCATGATGCACAAAGACCTGTGTGTGCTGCTGCTGGTACCC | + |
Preference number: 5 (lower is better) Translates to: KYPVICIKDYYHRTG*IMMHKDLCVLLLVP Trigger: GGGTACCAGCAGCAGCACACACAGGTCTTTGTGCATCATGATGCAGCCAGTTCTGTGGTAATAGTCTTTGATACAGATAACCGGATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGCATCAAAAGGATAGCTaGCTACCACTGAGCCACCAT | + |
Preference number: 5 (lower is better) Translates to: RNFSSYCSVSQEELSFCLHQKDS*LPLSHH Trigger: ATGGTGGCTCAGTGGTAGCAAGCTATCCTTTTGATG...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGCATCATCTGGTGACTaGCTGTACGTGGCAACTCCT | + |
Preference number: 5 (lower is better) Translates to: TLFLLRSREGRRLINSSRASSGD*LYVATP Trigger: AGGAGTTGCCACGTACAGCAAGTCACCAGATGATGC...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTGCAGATGCTGTGATTTaGTATGTCCCTGGGACCAAG | + |
Preference number: 5 (lower is better) Translates to: GKQSGCPIFCCINRNQIFADAVI*YVPGTK Trigger: CTTGGTCCCAGGGACATACAAAATCACAGCATCTGC...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GACCTGAATAAGAGAAACCCCAGCTATGTGCTAACTGGAGAAGAGAACTCCTCATCAGGTTCTGATATGTaGGGCTTATTGGAGATCTCC | + |
Preference number: 5 (lower is better) Translates to: DLNKRNPSYVLTGEENSSSGSDM*GLLEIS Trigger: GGAGATCTCCAATAAGCCCAACATATCAGAACCTGA...TGAGGAGTTCTCTTCTCCAGTTAGCACATAGCTGGGGTTTCTCTTATTCAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | TTTCACCTCTACTCATGGGACATCTGGTGCCTCCACAGCAAAGCCAGTGAGTTCTGCTTTAAAGTTTCTTaGTTTTCCACTGTCTGCACT | + |
Preference number: 5 (lower is better) Translates to: FHLYSWDIWCLHSKASEFCFKVS*FSTVCT Trigger: AGTGCAGACAGTGGAAAACAAAGAAACTTTAAAGCA...GAACTCACTGGCTTTGCTGTGGAGGCACCAGATGTCCCATGAGTAGAGGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | CAAAACGAATCTTCGGTTCTTCAGGTTCTGATATGTTGGGCTTATTaGAGATCTCCAGGGACCAAATGTGACGATACTCAACACTCTGTC | + |
Preference number: 5 (lower is better) Translates to: QNESSVLQVLICWAY*RSPGTKCDDTQHSV Trigger: GACAGAGTGTTGAGTATCGTCACATTTGGTCCCTGGAGATCTCCAATAAGCCCAACATATCAGAACCTGAAGAACCGAAGATTCGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | GCATCACTCCTCCAGGTATGTTCTCATCTGAATTATTTGGGCAACTaGGCTGACCCATGTGCATTGATGGATGGTTATTTGCATAAAGAG | + |
Preference number: 5 (lower is better) Translates to: ASLLQVCSHLNYLGN*ADPCALMDGYLHKE Trigger: CTCTTTATGCAAATAACCATCCATCAATGCACATGGGTCAGCCCAGTTGCCCAAATAATTCAGATGAGAACATACCTGGAGGAGTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | AACCAAATATCCGGTTATCTGTATCAAAGACTATTACCACAGAACTaGCTGCATCATGATGCACAAAGACCTGTGTGTGCTGCTGCTGGT | + |
Preference number: 5 (lower is better) Translates to: NQISGYLYQRLLPQN*LHHDAQRPVCAAAG Trigger: ACCAGCAGCAGCACACACAGGTCTTTGTGCATCATGATGCAGCCAGTTCTGTGGTAATAGTCTTTGATACAGATAACCGGATATTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | GAATATAATGTTTCCTCCTCTGTGTCCGTTTCATCCTGGAACTCATaGCTTAGGAGGGACTTCTTAGAGCCAGTTGACATCATGCGAATT | + |
Preference number: 5 (lower is better) Translates to: EYNVSSSVSVSSWNS*LRRDFLEPVDIMRI Trigger: AATTCGCATGATGTCAACTGGCTCTAAGAAGTCCCTCCTAAGCCATGAGTTCCAGGATGAAACGGACACAGAGGAGGAAACATTATATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTTTACTGACATCACAGTaGGCCGAAGGGAGAAATCCA | + |
Preference number: 5 (lower is better) Translates to: GKQSGCPIFCCINRNQIFLLTSQ*AEGRNP Trigger: TGGATTTCTCCCTTCGGCCAACTGTGATGTCAGTAA...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGGTACGTGGCAACTCCTaGCTCATTATCATCATAAGG | + |
Preference number: 5 (lower is better) Translates to: TVKGIIGQRTELLLEAHVVRGNS*LIIIIR Trigger: CCTTATGATGATAATGAGCAAGGAGTTGCCACGTAC...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGTTGAGATACATGTCCTaGCAAGGTCTACCTTGGAAC | + |
Preference number: 5 (lower is better) Translates to: RNFSSYCSVSQEELSFCLLRYMS*QGLPWN Trigger: GTTCCAAGGTAGACCTTGCAAGGACATGTATCTCAA...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGTCTCATCTGAATTATTaGGGCAACTGGGCTGACCCA | + |
Preference number: 5 (lower is better) Translates to: IVFVKEQGGKKAYKLITRSHLNY*GNWADP Trigger: TGGGTCAGCCCAGTTGCCCAAATAATTCAGATGAGA...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ACTGTCAAGGGAATCATAGGACAAAGGACTGAATTACTTTTGGAGGCCCATGTGCGGTGGAAGCCATCTTaGTGTCTATTAGACTTGATG | + |
Preference number: 5 (lower is better) Translates to: TVKGIIGQRTELLLEAHVRWKPS*CLLDLM Trigger: CATCAAGTCTAATAGACACAAAGATGGCTTCCACCG...CACATGGGCCTCCAAAAGTAATTCAGTCCTTTGTCCTATGATTCCCTTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | ATGGACACCTGGGTTATCAGATATCTCCATCACATACAGTTCTCTTaGCTCTACGGATTTCCCCAGAGAATAAAGACGGGTGATATTAGG | + |
Preference number: 5 (lower is better) Translates to: MDTWVIRYLHHIQFS*LYGFPQRIKTGDIR Trigger: CCTAATATCACCCGTCTTTATTCTCTGGGGAAATCCGTAGAGTCAAGAGAACTGTATGTGATGGAGATATCTGATAACCCAGGTGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | TCCTGGGACTTTTCATATCCATCAGGATTCATGGATGGCATAAGGTaGATTCTTGTGCTGCGAACCAAATCTGTTACTTCAGGGTCTGTT | + |
Preference number: 5 (lower is better) Translates to: SWDFSYPSGFMDGIR*ILVLRTKSVTSGSV Trigger: AACAGACCCTGAAGTAACAGATTTGGTTCGCAGCACAAGAATTCACCTTATGCCATCCATGAATCCTGATGGATATGAAAAGTCCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | CGAATCTCCTTCCTGGGACTTTTCATATCCATCAGGATTCATGGATaGCATAAGGTGAATTCTTGTGCTGCGAACCAAATCTGTTACTTC | + |
Preference number: 5 (lower is better) Translates to: RISFLGLFISIRIHG*HKVNSCAANQICYF Trigger: GAAGTAACAGATTTGGTTCGCAGCACAAGAATTCACCTTATGCCATCCATGAATCCTGATGGATATGAAAAGTCCCAGGAAGGAGATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | TTCATTACAAGTCCTCTCAGGAACTCGGATAAGTCTTTGTATGAATaGTATCGATACAGAGCCAGGTCTGAGGACGAGCTTAACATGAAG | + |
Preference number: 5 (lower is better) Translates to: FITSPLRNSDKSLYE*YRYRARSEDELNMK Trigger: CTTCATGTTAAGCTCGTCCTCAGACCTGGCTCTGTATCGATACCATTCATACAAAGACTTATCCGAGTTCCTGAGAGGACTTGTAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | TACCAGCAACAAAACGAATCTTCGGTTCTTCAGGTTCTGATATGTTaGGCTTATTGGAGATCTCCAGGGACCAAATGTGACGATACTCAA | + |
Preference number: 5 (lower is better) Translates to: YQQQNESSVLQVLIC*AYWRSPGTKCDDTQ Trigger: TTGAGTATCGTCACATTTGGTCCCTGGAGATCTCCAATAAGCCCAACATATCAGAACCTGAAGAACCGAAGATTCGTTTTGTTGCTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGAGGGCTGACCCATGTGCATaGATGGATGGTTATTTGCAT | + |
Preference number: 5 (lower is better) Translates to: IVFVKEQGGKKAYKLITRADPCA*MDGYLH Trigger: ATGCAAATAACCATCCATCAATGCACATGGGTCAGC...CCTCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGATTACCACGAGTTCCCTaGGCAAACCAAATATCCGGT | + |
Preference number: 5 (lower is better) Translates to: TLFLLRSREGRRLINSSRLPRVP*ANQISG Trigger: ACCGGATATTTGGTTTGCCAAGGGAACTCGTGGTAA...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | AATGTGATCAAAGACTCACGATTATTCTCCCATTCTTGTCGAAGCTaGGAAGCAGGTGGGTACTTGCAGCAAGACAATTCTAATGTGATC | + |
Preference number: 5 (lower is better) Translates to: NVIKDSRLFSHSCRS*EAGGYLQQDNSNVI Trigger: GATCACATTAGAATTGTCTTGCTGCAAGTACCCACCTGCTTCTCAGCTTCGACAAGAATGGGAGAATAATCGTGAGTCTTTGATCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | ACAAGTAATCTGTGGAAATCACCAAATCTTCCCGTTGTGATGTTATaGTTAATACCAGCCACTGAAATGGTTGCGTTCTCTAACCCAGAG | + |
Preference number: 5 (lower is better) Translates to: TSNLWKSPNLPVVML*LIPATEMVAFSNPE Trigger: CTCTGGGTTAGAGAACGCAACCATTTCAGTGGCTGGTATTAATCATAACATCACAACGGGAAGATTTGGTGATTTCCACAGATTACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | CTGTTACTTCAGGGTCTGTTCCAAAATTCTTGCAGAGGTATTCAATaGGATTCAATAGCAGCTCTCTTCCAACCACTTCATTTCCATGCA | + |
Preference number: 5 (lower is better) Translates to: LLLQGLFQNSCRGIQ*DSIAALFQPLHFHA Trigger: TGCATGGAAATGAAGTGGTTGGAAGAGAGCTGCTATTGAATCTCATTGAATACCTCTGCAAGAATTTTGGAACAGACCCTGAAGTAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 90 bp | CTTGGAATAAGAAAGTGCTATTTGCTGAAATACAGCATCATCTGGTaGCTTGCTGTACGTGGCAACTCCTTGCTCATTATCATCATAAGG | + |
Preference number: 5 (lower is better) Translates to: LGIRKCYLLKYSIIW*LAVRGNSLLIIIIR Trigger: CCTTATGATGATAATGAGCAAGGAGTTGCCACGTACAGCAAGTCACCAGATGATGCTGTATTTCAGCAAATAGCACTTTCTTATTCCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGATTCGTGATCCCATCTTaGAAAGTCTCGTCTTCATCT | + |
Preference number: 5 (lower is better) Translates to: TLFLLRSREGRRLINSSRFVIPS*KVSSSS Trigger: AGATGAAGACGAGACTTTCAAAGATGGGATCACGAA...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGTCTGTTCCAAAATTCTaGCAGAGGTATTCAATGAGA | + |
Preference number: 5 (lower is better) Translates to: RNFSSYCSVSQEELSFCLSVPKF*QRYSMR Trigger: TCTCATTGAATACCTCTGCAAGAATTTTGGAACAGA...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | GGGAAACAAAGCGGCTGCCCCATCTTCTGCTGCATAAATAGAAATCAGATTTTTTCTTTGACTCATTGTTaGCATCTGCTGAAGATCGAA | + |
Preference number: 5 (lower is better) Translates to: GKQSGCPIFCCINRNQIFSLTHC*HLLKIE Trigger: TTCGATCTTCAGCAGATGCAAACAATGAGTCAAAGA...AAAAATCTGATTTCTATTTATGCAGCAGAAGATGGGGCAGCCGCTTTGTTTCCC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AGGAATTTCTCTTCTTACTGCAGTGTCTCCCAAGAAGAGCTGTCATTTTGCCTGAACTCGGATAAGTCTTaGTATGAATGGTATCGATAC | + |
Preference number: 5 (lower is better) Translates to: RNFSSYCSVSQEELSFCLNSDKS*YEWYRY Trigger: GTATCGATACCATTCATACAAAGACTTATCCGAGTT...CAGGCAAAATGACAGCTCTTCTTGGGAGACACTGCAGTAAGAAGAGAAATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | ACATTGTTTTTGTTAAGGAGCAGGGAGGGAAGAAGGCTTATAAACTCATCACGATTGTGTCTATTAGACTaGATGGAGCAGATGCACCAA | + |
Preference number: 5 (lower is better) Translates to: TLFLLRSREGRRLINSSRLCLLD*MEQMHQ Trigger: TTGGTGCATCTGCTCCATCAAGTCTAATAGACACAA...TCGTGATGAGTTTATAAGCCTTCTTCCCTCCCTGCTCCTTAACAAAAACAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 90 bp | AATAAGAAAGTGCTATTTGCTGAAATACAGCATCATCTGGTGACTTaGTGTACGTGGCAACTCCTTGCTCATTATCATCATAAGGGTAGT | + |
Preference number: 5 (lower is better) Translates to: NKKVLFAEIQHHLVT*CTWQLLAHYHHKGS Trigger: ACTACCCTTATGATGATAATGAGCAAGGAGTTGCCACGTACAGCAAGTCACCAGATGATGCTGTATTTCAGCAAATAGCACTTTCTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTGAAGCAGGTGGGTACTaGCAGCAAGACAATTCTAAT | + |
Preference number: 5 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSEAGGY*QQDNSN Trigger: ATTAGAATTGTCTTGCTGCAAGTACCCACCTGCTTC...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 90 bp | AGATCTTCGATTTTGCTCCCAGTACTTTGGCAGTTCATTCTCAAATaGATATTTCACACAACCGAGTTCGATAGTTACTTCAAAGCAATT | + |
Preference number: 5 (lower is better) Translates to: RSSILLPVLWQFILK*IFHTTEFDSYFKAI Trigger: AATTGCTTTGAAGTAACTATCGAACTCGGTTGTGTGAAATATCCATTTGAGAATGAACTGCCAAAGTACTGGGAGCAAAATCGAAGATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS-3UTR CAA 90 bp | AAAAGCATCATTCCACTGAACAGCATTCAGACAGACACAATAAAATACCAATCTTTTGCTCCCAGTACTTaGGCAGTTCATTCTCAAATG | + |
Preference number: 5 (lower is better) Translates to: KSIIPLNSIQTDTIKYQSFAPST*AVHSQM Trigger: CATTTGAGAATGAACTGCCAAAGTACTGGGAGCAAA...AGATTGGTATTTTATTGTGTCTGTCTGAATGCTGTTCAGTGGAATGATGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | GCCGCCTCGGAGCCGCCAACGGTTGTCGTGGTCGCCTCAGCCTTCTaGATGTGCGCCGCCTGGGCCGAGCTCCTCAGTAGCAGCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: AASEPPTVVVVASAF*MCAAWAELLSSSSS Trigger: GCTGCTGCTGCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGACAACCGTTGGCGGCTCCGAGGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | CGCCAGCTCGCGGGCCAGGTAGACCAACACCTGGCGTaGCACCGTCTCGTCGCCGTGCATGTTACCCACCAG | + |
Preference number: 6 (lower is better) Translates to: RQLAGQVDQHLA*HRLVAVHVTHQ Trigger: CTGGTGGGTAACATGCACGGCGACGAGACGGTGTCACGCCAGGTGTTGGTCTACCTGGCCCGCGAGCTGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | GTCGTGGTCGCCTCAGCCTTCTTGATGTGCGCCGCCTaGGCCGAGCTCCTCAGTAGCAGCAGCAGCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: VVVASAFLMCAA*AELLSSSSSSS Trigger: GCTGCTGCTGCTGCTGCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGAC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | ACCTCATCCAGGGAAGGTGGCTCGCCGGTGCTGAACTaGTCAGGGAAGCTGCGGTTGAGGTCGCGGCCTCGG | + |
Preference number: 6 (lower is better) Translates to: TSSREGGSPVLN*SGKLRLRSRPR Trigger: CCGAGGCCGCGACCTCAACCGCAGCTTCCCTGACCAGTTCAGCACCGGCGAGCCACCTTCCCTGGATGAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | GAGCCGCCAACGGTTGTCGTGGTCGCCTCAGCCTTCTaGATGTGCGCCGCCTGGGCCGAGCTCCTCAGTAGC | + |
Preference number: 6 (lower is better) Translates to: EPPTVVVVASAF*MCAAWAELLSS Trigger: GCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGACAACCGTTGGCGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | AGCCGCCAACGGTTGTCGTGGTCGCCTCAGCCTTCTTaGTGTGCGCCGCCTGGGCCGAGCTCCTCAGTAGCA | + |
Preference number: 6 (lower is better) Translates to: SRQRLSWSPQPS*CAPPGPSSSVA Trigger: TGCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGACAACCGTTGGCGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 72 bp | CCAACGGTTGTCGTGGTCGCCTCAGCCTTCTTGATGTaGGCCGCCTGGGCCGAGCTCCTCAGTAGCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: PTVVVVASAFLM*AAWAELLSSSS Trigger: GCTGCTGCTACTGAGGAGCTCGGCCCAGGCGGCGCACATCAAGAAGGCTGAGGCGACCACGACAACCGTTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | CAGAAAGCACAAACTTGTTCCTGCGGATCCAGTCGATaGGGGCGCGCACCTCCGGCACCTCATCCAGGGAAG | + |
Preference number: 6 (lower is better) Translates to: QKAQTCSCGSSR*GRAPPAPHPGK Trigger: CTTCCCTGGATGAGGTGCCGGAGGTGCGCGCCCTCATCGACTGGATCCGCAGGAACAAGTTTGTGCTTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | CAGGTCTTTGCCATGAGCATTTGTGTGCCCAGTCTTTaGGGTGCAGTCTTTCTCTTGAGCACGCTCTCGCCC | + |
Preference number: 6 (lower is better) Translates to: QVFAMSICVPSL*GAVFLLSTLSP Trigger: GGGCGAGAGCGTGCTCAAGAGAAAGACTGCACCTCAAAGACTGGGCACACAAATGCTCATGGCAAAGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | CCACCTTCCACGTCATACCAGTGCGCGCCATTCGTGATCCCATCTTaGAAAGTCTCGTCTTCATCTCCTGGACAATGGGGTTCGCCAGTT | + |
Preference number: 6 (lower is better) Translates to: PPSTSYQCAPFVIPS*KVSSSSPGQWGSPV Trigger: AACTGGCGAACCCCATTGTCCAGGAGATGAAGACGAGACTTTCAAAGATGGGATCACGAATGGCGCGCACTGGTATGACGTGGAAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | TTTGTGTGCCCAGTCTTTGAGGTGCAGTCTTTCTCTTaGGCACGCTCTCGCCCATCTGGATTCAGAGAGGGA | + |
Preference number: 6 (lower is better) Translates to: FVCPVFEVQSFS*ARSRPSGFREG Trigger: TCCCTCTCTGAATCCAGATGGGCGAGAGCGTGCTCAAGAGAAAGACTGCACCTCAAAGACTGGGCACACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | GGCTCCCCGCATCACTCCTCCAGGTATGTTCTCATCTaGATTATTTGGGCAACTGGGCTGACCCATGTGCAT | + |
Preference number: 6 (lower is better) Translates to: GSPHHSSRYVLI*IIWATGLTHVH Trigger: ATGCACATGGGTCAGCCCAGTTGCCCAAATAATTCAGATGAGAACATACCTGGAGGAGTGATGCGGGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | GTGTGTGCTGCTGCTGGTACCCATCAGCAATTGCGTTaGTGTTATGGACTCCAGGAGCTAGGAGCACATGGA | + |
Preference number: 6 (lower is better) Translates to: VCAAAGTHQQLR*CYGLQELGAHG Trigger: TCCATGTGCTCCTAGCTCCTGGAGTCCATAACATCAACGCAATTGCTGATGGGTACCAGCAGCAGCACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | TGTGTGTGCTGCTGCTGGTACCCATCAGCAATTGCGTaGATGTTATGGACTCCAGGAGCTAGGAGCACATGG | + |
Preference number: 6 (lower is better) Translates to: CVCCCWYPSAIA*MLWTPGARSTW Trigger: CCATGTGCTCCTAGCTCCTGGAGTCCATAACATCAACGCAATTGCTGATGGGTACCAGCAGCAGCACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | AGTCTGTGTCCAGGTCTTTGCCATGAGCATTTGTGTGCCCAGTCTTaGAGGTGCAGTCTTTCTCTTGAGCACGCTCTCGCCCATCTGGAT | + |
Preference number: 6 (lower is better) Translates to: SLCPGLCHEHLCAQS*RCSLSLEHALAHLD Trigger: ATCCAGATGGGCGAGAGCGTGCTCAAGAGAAAGACTGCACCTCAAAGACTGGGCACACAAATGCTCATGGCAAAGACCTGGACACAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | GCCTTCACCCAGCTCATCACAGCGATAGTTTCTGGTTaGGTAGGTTCTGTGATTGGAACAAACTGGTCTGGG | + |
Preference number: 6 (lower is better) Translates to: AFTQLITAIVSG*VGSVIGTNWSG Trigger: CCCAGACCAGTTTGTTCCAATCACAGAACCTACCCAACCAGAAACTATCGCTGTGATGAGCTGGGTGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | CCAGCCTTGTCTTTTACTAACCCGTGGACTCCTTTGTaGACCTCCACCAGCATGCTAAGGAGAGACTTCTTG | + |
Preference number: 6 (lower is better) Translates to: PALSFTNPWTPL*TSTSMLRRDFL Trigger: CAAGAAGTCTCTCCTTAGCATGCTGGTGGAGGTCCACAAAGGAGTCCACGGGTTAGTAAAAGACAAGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | ACGTCATACCAGTGCGCGCCATTCGTGATCCCATCTTaGAAAGTCTCGTCTTCATCTCCTGGACAATGGGGT | + |
Preference number: 6 (lower is better) Translates to: TSYQCAPFVIPS*KVSSSSPGQWG Trigger: ACCCCATTGTCCAGGAGATGAAGACGAGACTTTCAAAGATGGGATCACGAATGGCGCGCACTGGTATGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | GGCCTTCACCCAGCTCATCACAGCGATAGTTTCTGGTaGGGTAGGTTCTGTGATTGGAACAAACTGGTCTGG | + |
Preference number: 6 (lower is better) Translates to: GLHPAHHSDSFW*GRFCDWNKLVW Trigger: CCAGACCAGTTTGTTCCAATCACAGAACCTACCCAACCAGAAACTATCGCTGTGATGAGCTGGGTGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | AAACGGGTAGGCCTTCACCCAGCTCATCACAGCGATAGTTTCTGGTaGGGTAGGTTCTGTGATTGGAACAAACTGGTCTGGGAAATTCCG | + |
Preference number: 6 (lower is better) Translates to: KRVGLHPAHHSDSFW*GRFCDWNKLVWEIP Trigger: CGGAATTTCCCAGACCAGTTTGTTCCAATCACAGAACCTACCCAACCAGAAACTATCGCTGTGATGAGCTGGGTGAAGGCCTACCCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | CGGCTCCCCGCATCACTCCTCCAGGTATGTTCTCATCTGAATTATTaGGGCAACTGGGCTGACCCATGTGCATTGATGGATGGTTATTTG | + |
Preference number: 6 (lower is better) Translates to: RLPASLLQVCSHLNY*GNWADPCALMDGYL Trigger: CAAATAACCATCCATCAATGCACATGGGTCAGCCCAGTTGCCCAAATAATTCAGATGAGAACATACCTGGAGGAGTGATGCGGGGAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | ATCGATACAGAGCCAGGTCTGAGGACGAGCTTAACATaGAGCCTTCCAAGCCATTCTCAGCCGAAAGGTGTT | + |
Preference number: 6 (lower is better) Translates to: IDTEPGLRTSLT*SLPSHSQPKGV Trigger: AACACCTTTCGGCTGAGAATGGCTTGGAAGGCTTCATGTTAAGCTCGTCCTCAGACCTGGCTCTGTATCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | GGTGCAGTCTTTCTCTTGAGCACGCTCTCGCCCATCTaGATTCAGAGAGGGAACAATCACAATTCTAGTCCT | + |
Preference number: 6 (lower is better) Translates to: GAVFLLSTLSPI*IQRGNNHNSSP Trigger: AGGACTAGAATTGTGATTGTTCCCTCTCTGAATCCAGATGGGCGAGAGCGTGCTCAAGAGAAAGACTGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | GAACAGCAACTGTGCCAGGAGTTGTTACAGCCTCAGTaGAACCAGGCATTACTGACATCACAGTTGGCCGAA | + |
Preference number: 6 (lower is better) Translates to: EQQLCQELLQPQ*NQALLTSQLAE Trigger: TTCGGCCAACTGTGATGTCAGTAATGCCTGGTTCAACTGAGGCTGTAACAACTCCTGGCACAGTTGCTGTTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | TTACCAGCCTTGTCTTTTACTAACCCGTGGACTCCTTaGTGGACCTCCACCAGCATGCTAAGGAGAGACTTC | + |
Preference number: 6 (lower is better) Translates to: LPALSFTNPWTP*WTSTSMLRRDF Trigger: GAAGTCTCTCCTTAGCATGCTGGTGGAGGTCCACAAAGGAGTCCACGGGTTAGTAAAAGACAAGGCTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | GAGGCGCCAGTAATCTCCAGCTTTGTAAGTGGTCACTaGGTGATTAATTTCAGCAACACTGAGGGTGGCATT | + |
Preference number: 6 (lower is better) Translates to: EAPVISSFVSGH*VINFSNTEGGI Trigger: AATGCCACCCTCAGTGTTGCTGAAATTAATCACCCAGTGACCACTTACAAAGCTGGAGATTACTGGCGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | CCTTCATTGAGTACAATGACTGCTTTCGAGATTGGTTTACCAGCCTaGTCTTTTACTAACCCGTGGACTCCTTTGTGGACCTCCACCAGC | + |
Preference number: 6 (lower is better) Translates to: PSLSTMTAFEIGLPA*SFTNPWTPLWTSTS Trigger: GCTGGTGGAGGTCCACAAAGGAGTCCACGGGTTAGTAAAAGACAAGGCTGGTAAACCAATCTCGAAAGCAGTCATTGTACTCAATGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | GAGCTTAACATGAAGCCTTCCAAGCCATTCTCAGCCGAAAGGTGTTaGATTAATGCTTCAAACTCCTTAGAAGTTGGGTCGCTGGTGTCG | + |
Preference number: 6 (lower is better) Translates to: ELNMKPSKPFSAERC*INASNSLEVGSLVS Trigger: CGACACCAGCGACCCAACTTCTAAGGAGTTTGAAGCATTAATCAAACACCTTTCGGCTGAGAATGGCTTGGAAGGCTTCATGTTAAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | ATGTTGGGCTTATTGGAGATCTCCAGGGACCAAATGTaGCGATACTCAACACTCTGTCCCAAAGTGGTAAGG | + |
Preference number: 6 (lower is better) Translates to: MLGLLEISRDQM*RYSTLCPKVVR Trigger: CCTTACCACTTTGGGACAGAGTGTTGAGTATCGTCACATTTGGTCCCTGGAGATCTCCAATAAGCCCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | GTATCAAAGACTATTACCACAGAACTGGCTGCATCATaGTGCACAAAGACCTGTGTGTGCTGCTGCTGGTAC | + |
Preference number: 6 (lower is better) Translates to: VSKTITTELAAS*CTKTCVCCCWY Trigger: GTACCAGCAGCAGCACACACAGGTCTTTGTGCATCATGATGCAGCCAGTTCTGTGGTAATAGTCTTTGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | CGTGATCCCATCTTTGAAAGTCTCGTCTTCATCTCCTaGACAATGGGGTTCGCCAGTTTTCATTATAGGGTG | + |
Preference number: 6 (lower is better) Translates to: RDPIFESLVFIS*TMGFASFHYRV Trigger: CACCCTATAATGAAAACTGGCGAACCCCATTGTCCAGGAGATGAAGACGAGACTTTCAAAGATGGGATCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | GTGAAAGTCTTTAGGCTGAATTGGCTGATGGGAGGATaGTGTTCCAGGAGGGATATTAGGAACAGCAACTGT | + |
Preference number: 6 (lower is better) Translates to: VKVFRLNWLMGG*CSRRDIRNSNC Trigger: ACAGTTGCTGTTCCTAATATCCCTCCTGGAACACCATCCTCCCATCAGCCAATTCAGCCTAAAGACTTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | AGTCCTCTCAGGAACTCGGATAAGTCTTTGTATGAATaGTATCGATACAGAGCCAGGTCTGAGGACGAGCTT | + |
Preference number: 6 (lower is better) Translates to: SPLRNSDKSLYE*YRYRARSEDEL Trigger: AAGCTCGTCCTCAGACCTGGCTCTGTATCGATACCATTCATACAAAGACTTATCCGAGTTCCTGAGAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | GCCAAGAGCAGTTCAGTTCCAACTGGAGCGTTTCCATaGATACCAGCAACAAAACGAATCTTCGGTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: AKSSSVPTGAFP*IPATKRIFGSS Trigger: TGAAGAACCGAAGATTCGTTTTGTTGCTGGTATCCATGGAAACGCTCCAGTTGGAACTGAACTGCTCTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | GCATCACTCCTCCAGGTATGTTCTCATCTGAATTATTaGGGCAACTGGGCTGACCCATGTGCATTGATGGAT | + |
Preference number: 6 (lower is better) Translates to: ASLLQVCSHLNY*GNWADPCALMD Trigger: ATCCATCAATGCACATGGGTCAGCCCAGTTGCCCAAATAATTCAGATGAGAACATACCTGGAGGAGTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | AGAGTCCAGTGGTCTTATGCTCGGGAGAATCATCAAAAGGATAGCTaGCTACCACTGAGCCACCATGAAGATTTCCAGAAAGCACAAACT | + |
Preference number: 6 (lower is better) Translates to: RVQWSYARENHQKDS*LPLSHHEDFQKAQT Trigger: AGTTTGTGCTTTCTGGAAATCTTCATGGTGGCTCAGTGGTAGCAAGCTATCCTTTTGATGATTCTCCCGAGCATAAGACCACTGGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | GTTGACATCATGCGAATTTCATCTTCATATTCATCATaGTGCTGCCGCAGCCGGTGGAAGCCATCTTTGTGT | + |
Preference number: 6 (lower is better) Translates to: VDIMRISSSYSS*CCRSRWKPSLC Trigger: ACACAAAGATGGCTTCCACCGGCTGCGGCAGCATCATGATGAATATGAAGATGAAATTCGCATGATGTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 72 bp | AACTGGGTTCCTTTTGTAATTCAGGCAAAGAAATTCTaGCAGAGCCAAGAGCAGTTCAGTTCCAACTGGAGC | + |
Preference number: 6 (lower is better) Translates to: NWVPFVIQAKKF*QSQEQFSSNWS Trigger: GCTCCAGTTGGAACTGAACTGCTCTTGGCTCTGGCAGAATTTCTTTGCCTGAATTACAAAAGGAACCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | CCATCTTTGAAAGTCTCGTCTTCATCTCCTGGACAATaGGGTTCGCCAGTTTTCATTATAGGGTGGTTAGAG | + |
Preference number: 6 (lower is better) Translates to: PSLKVSSSSPGQ*GSPVFIIGWLE Trigger: CTCTAACCACCCTATAATGAAAACTGGCGAACCCCATTGTCCAGGAGATGAAGACGAGACTTTCAAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | AAATTCTGCCAGAGCCAAGAGCAGTTCAGTTCCAACTaGAGCGTTTCCATGGATACCAGCAACAAAACGAAT | + |
Preference number: 6 (lower is better) Translates to: KFCQSQEQFSSN*SVSMDTSNKTN Trigger: ATTCGTTTTGTTGCTGGTATCCATGGAAACGCTCCAGTTGGAACTGAACTGCTCTTGGCTCTGGCAGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | TGGGAAGTAGCAGCAGCTTGTGTATACCGTGATTTCTaGGCAATGGCCATAGGTGACACTATAATCCTTCAT | + |
Preference number: 6 (lower is better) Translates to: WEVAAACVYRDF*AMAIGDTIILH Trigger: ATGAAGGATTATAGTGTCACCTATGGCCATTGCCCAGAAATCACGGTATACACAAGCTGCTGCTACTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | CAATGTGATCAAAGACTCACGATTATTCTCCCATTCTaGTCGAAGCTGAGAAGCAGGTGGGTACTTGCAGCA | + |
Preference number: 6 (lower is better) Translates to: QCDQRLTIILPF*SKLRSRWVLAA Trigger: TGCTGCAAGTACCCACCTGCTTCTCAGCTTCGACAAGAATGGGAGAATAATCGTGAGTCTTTGATCACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | AGTACAATGACTGCTTTCGAGATTGGTTTACCAGCCTaGTCTTTTACTAACCCGTGGACTCCTTTGTGGACC | + |
Preference number: 6 (lower is better) Translates to: STMTAFEIGLPA*SFTNPWTPLWT Trigger: GGTCCACAAAGGAGTCCACGGGTTAGTAAAAGACAAGGCTGGTAAACCAATCTCGAAAGCAGTCATTGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | GTGATTGGAACAAACTGGTCTGGGAAATTCCGGTTTAGGTCAAAGTaGTTGCTGTTGTTTCTGCCAACTACACTGATCGAATCTCCTTCC | + |
Preference number: 6 (lower is better) Translates to: VIGTNWSGKFRFRSK*LLLFLPTTLIESPS Trigger: GGAAGGAGATTCGATCAGTGTAGTTGGCAGAAACAACAGCAACAACTTTGACCTAAACCGGAATTTCCCAGACCAGTTTGTTCCAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | TTTCCACTGTCTGCACTGGTTTATCATACGGATATGTaGCCAGCACAGAACCACCATCTAAGGCAATGGAAA | + |
Preference number: 6 (lower is better) Translates to: FPLSALVYHTDM*PAQNHHLRQWK Trigger: TTTCCATTGCCTTAGATGGTGGTTCTGTGCTGGTCACATATCCGTATGATAAACCAGTGCAGACAGTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | AGACTTCATCATCGGAGGTTTTGCTATAGAGTCCAGTaGTCTTATGCTCGGGAGAATCATCAAAAGGATAGC | + |
Preference number: 6 (lower is better) Translates to: RLHHRRFCYRVQ*SYARENHQKDS Trigger: GCTATCCTTTTGATGATTCTCCCGAGCATAAGACCACTGGACTCTATAGCAAAACCTCCGATGATGAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | GCTGAAATACAGCATCATCTGGTGACTTGCTGTACGTaGCAACTCCTTGCTCATTATCATCATAAGGGTAGT | + |
Preference number: 6 (lower is better) Translates to: AEIQHHLVTCCT*QLLAHYHHKGS Trigger: ACTACCCTTATGATGATAATGAGCAAGGAGTTGCCACGTACAGCAAGTCACCAGATGATGCTGTATTTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | TCTTCGGTTCTTCAGGTTCTGATATGTTGGGCTTATTaGAGATCTCCAGGGACCAAATGTGACGATACTCAA | + |
Preference number: 6 (lower is better) Translates to: SSVLQVLICWAY*RSPGTKCDDTQ Trigger: TTGAGTATCGTCACATTTGGTCCCTGGAGATCTCCAATAAGCCCAACATATCAGAACCTGAAGAACCGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | CTCCAGGTATGTTCTCATCTGAATTATTTGGGCAACTaGGCTGACCCATGTGCATTGATGGATGGTTATTTG | + |
Preference number: 6 (lower is better) Translates to: LQVCSHLNYLGN*ADPCALMDGYL Trigger: CAAATAACCATCCATCAATGCACATGGGTCAGCCCAGTTGCCCAAATAATTCAGATGAGAACATACCTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | TCCGGTTATCTGTATCAAAGACTATTACCACAGAACTaGCTGCATCATGATGCACAAAGACCTGTGTGTGCT | + |
Preference number: 6 (lower is better) Translates to: SGYLYQRLLPQN*LHHDAQRPVCA Trigger: AGCACACACAGGTCTTTGTGCATCATGATGCAGCCAGTTCTGTGGTAATAGTCTTTGATACAGATAACCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | ATGAAGCCTTCCAAGCCATTCTCAGCCGAAAGGTGTTaGATTAATGCTTCAAACTCCTTAGAAGTTGGGTCG | + |
Preference number: 6 (lower is better) Translates to: MKPSKPFSAERC*INASNSLEVGS Trigger: CGACCCAACTTCTAAGGAGTTTGAAGCATTAATCAAACACCTTTCGGCTGAGAATGGCTTGGAAGGCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | GTGCTGCGAACCAAATCTGTTACTTCAGGGTCTGTTCCAAAATTCTaGCAGAGGTATTCAATGAGATTCAATAGCAGCTCTCTTCCAACC | + |
Preference number: 6 (lower is better) Translates to: VLRTKSVTSGSVPKF*QRYSMRFNSSSLPT Trigger: GGTTGGAAGAGAGCTGCTATTGAATCTCATTGAATACCTCTGCAAGAATTTTGGAACAGACCCTGAAGTAACAGATTTGGTTCGCAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | TGGGTTATCAGATATCTCCATCACATACAGTTCTCTTaGCTCTACGGATTTCCCCAGAGAATAAAGACGGGT | + |
Preference number: 6 (lower is better) Translates to: WVIRYLHHIQFS*LYGFPQRIKTG Trigger: ACCCGTCTTTATTCTCTGGGGAAATCCGTAGAGTCAAGAGAACTGTATGTGATGGAGATATCTGATAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 72 bp | GTGCTATTTGCTGAAATACAGCATCATCTGGTGACTTaGTGTACGTGGCAACTCCTTGCTCATTATCATCAT | + |
Preference number: 6 (lower is better) Translates to: VLFAEIQHHLVT*CTWQLLAHYHH Trigger: ATGATGATAATGAGCAAGGAGTTGCCACGTACAGCAAGTCACCAGATGATGCTGTATTTCAGCAAATAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | TTCCTGGGACTTTTCATATCCATCAGGATTCATGGATaGCATAAGGTGAATTCTTGTGCTGCGAACCAAATC | + |
Preference number: 6 (lower is better) Translates to: FLGLFISIRIHG*HKVNSCAANQI Trigger: GATTTGGTTCGCAGCACAAGAATTCACCTTATGCCATCCATGAATCCTGATGGATATGAAAAGTCCCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | AACTGGTCTGGGAAATTCCGGTTTAGGTCAAAGTTGTaGCTGTTGTTTCTGCCAACTACACTGATCGAATCT | + |
Preference number: 6 (lower is better) Translates to: NWSGKFRFRSKL*LLFLPTTLIES Trigger: AGATTCGATCAGTGTAGTTGGCAGAAACAACAGCAACAACTTTGACCTAAACCGGAATTTCCCAGACCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | CTTTTCAATCAATGTGATCAAAGACTCACGATTATTCTCCCATTCTaGTCGAAGCTGAGAAGCAGGTGGGTACTTGCAGCAAGACAATTC | + |
Preference number: 6 (lower is better) Translates to: LFNQCDQRLTIILPF*SKLRSRWVLAARQF Trigger: GAATTGTCTTGCTGCAAGTACCCACCTGCTTCTCAGCTTCGACAAGAATGGGAGAATAATCGTGAGTCTTTGATCACATTGATTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | CTGTGGAAATCACCAAATCTTCCCGTTGTGATGTTATaGTTAATACCAGCCACTGAAATGGTTGCGTTCTCT | + |
Preference number: 6 (lower is better) Translates to: LWKSPNLPVVML*LIPATEMVAFS Trigger: AGAGAACGCAACCATTTCAGTGGCTGGTATTAATCATAACATCACAACGGGAAGATTTGGTGATTTCCACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | AGAGGGAACAATCACAATTCTAGTCCTGTCAACCAATaGGGTAACAACTGGGTTCCTTTTGTAATTCAGGCA | + |
Preference number: 6 (lower is better) Translates to: RGNNHNSSPVNQ*GNNWVPFVIQA Trigger: TGCCTGAATTACAAAAGGAACCCAGTTGTTACCCAATTGGTTGACAGGACTAGAATTGTGATTGTTCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 90 bp | TGGATTCAGAGAGGGAACAATCACAATTCTAGTCCTGTCAACCAATaGGGTAACAACTGGGTTCCTTTTGTAATTCAGGCAAAGAAATTC | + |
Preference number: 6 (lower is better) Translates to: WIQRGNNHNSSPVNQ*GNNWVPFVIQAKKF Trigger: GAATTTCTTTGCCTGAATTACAAAAGGAACCCAGTTGTTACCCAATTGGTTGACAGGACTAGAATTGTGATTGTTCCCTCTCTGAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CCA 72 bp | ATACTTAAATTCTGGTTCACCTGGTTCATGGACACCTaGGTTATCAGATATCTCCATCACATACAGTTCTCT | + |
Preference number: 6 (lower is better) Translates to: ILKFWFTWFMDT*VIRYLHHIQFS Trigger: AGAGAACTGTATGTGATGGAGATATCTGATAACCCAGGTGTCCATGAACCAGGTGAACCAGAATTTAAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS TCA 72 bp | TTTTCATATCCATCAGGATTCATGGATGGCATAAGGTaGATTCTTGTGCTGCGAACCAAATCTGTTACTTCA | + |
Preference number: 6 (lower is better) Translates to: FSYPSGFMDGIR*ILVLRTKSVTS Trigger: TGAAGTAACAGATTTGGTTCGCAGCACAAGAATTCACCTTATGCCATCCATGAATCCTGATGGATATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | ACCAAATCTGTTACTTCAGGGTCTGTTCCAAAATTCTaGCAGAGGTATTCAATGAGATTCAATAGCAGCTCT | + |
Preference number: 6 (lower is better) Translates to: TKSVTSGSVPKF*QRYSMRFNSSS Trigger: AGAGCTGCTATTGAATCTCATTGAATACCTCTGCAAGAATTTTGGAACAGACCCTGAAGTAACAGATTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS CAA 72 bp | ATACTCATTGAGATACATGTCCTTGCAAGGTCTACCTaGGAACATCTGCGAATTTTCCTTGGAATAAGAAAG | + |
Preference number: 6 (lower is better) Translates to: ILIEIHVLARST*EHLRIFLGIRK Trigger: CTTTCTTATTCCAAGGAAAATTCGCAGATGTTCCAAGGTAGACCTTGCAAGGACATGTATCTCAATGAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |
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CDS GCA 72 bp | TGTGTATACTTTTATTCCTTCATTGAGTACAATGACTaGTTTCGAGATTGGTTTACCAGCCTTGTCTTTTAC | + |
Preference number: 6 (lower is better) Translates to: CVYFYSFIEYND*FRDWFTSLVFY Trigger: GTAAAAGACAAGGCTGGTAAACCAATCTCGAAAGCAGTCATTGTACTCAATGAAGGAATAAAAGTATACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021201.6 |