Pregenerated sensors for CPB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021999Ensembl transcript IDs: ENSMUST00000022576.10
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | CTTTCTCACACCAGTGTTTGGAAGCGAAGTTCCTGTTCAGGTCTGTaGCCACGCAGCGGTTGTTCTTGTGAGCAGAGCGGTTCTTCCTCC | + |
Preference number: 5 (lower is better) Translates to: LSHTSVWKRSSCSGL*PRSGCSCEQSGSSS Trigger: GGAGGAAGAACCGCTCTGCTCACAAGAACAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CCA 90 bp | TTTCAGAGCAGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTTaGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACGCAGCGGTTGT | + |
Preference number: 5 (lower is better) Translates to: FQSRRNLTHLSHTSV*KRSSCSGLCPRSGC Trigger: ACAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 90 bp | CACGAACTGCTTCGCTGGCCACTAGAGACAGTTCTTCGTGGTCCTTaGTTTTGCTTCTGTTATAGGAATAGGGAAACAGTATTTGTTGGG | + |
Preference number: 5 (lower is better) Translates to: HELLRWPLETVLRGP*FCFCYRNRETVFVG Trigger: CCCAACAAATACTGTTTCCCTATTCCTATAACAGAAGCAAAAGCAAGGACCACGAAGAACTGTCTCTAGTGGCCAGCGAAGCAGTTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 90 bp | CCTGATGACATGCCAAACTATTTTAGAGATGGCGGCCAAAGCTTCTaGACAAGTGGGTTTGATGTATCTCTCAGGCAGCAAGAATCCGTA | + |
Preference number: 5 (lower is better) Translates to: PDDMPNYFRDGGQSF*TSGFDVSLRQQESV Trigger: TACGGATTCTTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAAAATAGTTTGGCATGTCATCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 90 bp | GTAAGCTTTAATGTGGTCGATATTTCTTCTCAAGAAGTCAGCCACTaGCTTCACCTCTGGCTCAGACTCAGGATAAAGTCCACAGTAGGT | + |
Preference number: 5 (lower is better) Translates to: VSFNVVDISSQEVSH*LHLWLRLRIKSTVG Trigger: ACCTACTGTGGACTTTATCCTGAGTCTGAGCCAGAGGTGAAGGCAGTGGCTGACTTCTTGAGAAGAAATATCGACCACATTAAAGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS TCA 90 bp | TCTTTTTCCACGTGTAGTCATAGCCATCCACGTTCATCACGGGCATaGTGTAGAAATCCACGTGCCTCAGAAGTCTGGTATACAGATTTT | + |
Preference number: 5 (lower is better) Translates to: SFSTCSHSHPRSSRA*CRNPRASEVWYTDF Trigger: AAAATCTGTATACCAGACTTCTGAGGCACGTGGATTTCTACATCATGCCCGTGATGAACGTGGATGGCTATGACTACACGTGGAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS TCA 90 bp | ATCCGATGTAGATTTTCTGGAGCATGTCAGGATGCTGTTCAGTTATaGCTTCTATCCAGGAATAGATTTCATTTAGCGAGTGATACTGCT | + |
Preference number: 5 (lower is better) Translates to: IRCRFSGACQDAVQL*LLSRNRFHLASDTA Trigger: AGCAGTATCACTCGCTAAATGAAATCTATTCCTGGATAGAAGTCATAACTGAACAGCATCCTGACATGCTCCAGAAAATCTACATCGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 72 bp | GCGGAGGCGCGGGGGCTGACCGTGTCATTGAAAGTCTaGTGTTCAATTAGGTCCTCCACGTTGTTCATCAGA | + |
Preference number: 6 (lower is better) Translates to: AEARGLTVSLKV*CSIRSSTLFIR Trigger: TCTGATGAACAACGTGGAGGACCTAATTGAACAGCAGACTTTCAATGACACGGTCAGCCCCCGCGCCTCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 72 bp | ACCAGTGTTTGGAAGCGAAGTTCCTGTTCAGGTCTGTaGCCACGCAGCGGTTGTTCTTGTGAGCAGAGCGGT | + |
Preference number: 6 (lower is better) Translates to: TSVWKRSSCSGL*PRSGCSCEQSG Trigger: ACCGCTCTGCTCACAAGAACAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CAA 90 bp | GTTTCAGAGCAGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTaGGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACGCAGCGGTTG | + |
Preference number: 6 (lower is better) Translates to: VSEQEELDAPFSHQC*EAKFLFRSVPTQRL Trigger: CAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CCA 72 bp | AGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTTaGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACGC | + |
Preference number: 6 (lower is better) Translates to: RRNLTHLSHTSV*KRSSCSGLCPR Trigger: GCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CAA 72 bp | CAGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTaGGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACG | + |
Preference number: 6 (lower is better) Translates to: QEELDAPFSHQC*EAKFLFRSVPT Trigger: CGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS TCA 72 bp | CTGTTCAGGTCTGTGCCCACGCAGCGGTTGTTCTTGTaGGCAGAGCGGTTCTTCCTCCACATTCGATTCTTT | + |
Preference number: 6 (lower is better) Translates to: LFRSVPTQRLFL*AERFFLHIRFF Trigger: AAAGAATCGAATGTGGAGGAAGAACCGCTCTGCTCACAAGAACAACCGCTGCGTGGGCACAGACCTGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS TCA 72 bp | CACTCTGAAAGGCGAAGCCATGCTGCTCATAGAGGATaGTGGCTACCAGGATTCCAAGGCCATGAAGCTTCA | + |
Preference number: 6 (lower is better) Translates to: HSERRSHAAHRG*WLPGFQGHEAS Trigger: TGAAGCTTCATGGCCTTGGAATCCTGGTAGCCATCATCCTCTATGAGCAGCATGGCTTCGCCTTTCAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS TCA 72 bp | ACGTGTAGTCATAGCCATCCACGTTCATCACGGGCATaGTGTAGAAATCCACGTGCCTCAGAAGTCTGGTAT | + |
Preference number: 6 (lower is better) Translates to: TCSHSHPRSSRA*CRNPRASEVWY Trigger: ATACCAGACTTCTGAGGCACGTGGATTTCTACATCATGCCCGTGATGAACGTGGATGGCTATGACTACACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CAA 72 bp | GATAAAGTCCACAGTAGGTTTCAGAGCAGGAGGAACTaGACGCACCTTTCTCACACCAGTGTTTGGAAGCGA | + |
Preference number: 6 (lower is better) Translates to: DKVHSRFQSRRN*THLSHTSVWKR Trigger: TCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAACCTACTGTGGACTTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CAA 72 bp | TTAGAGATGGCGGCCAAAGCTTCTGCACAAGTGGGTTaGATGTATCTCTCAGGCAGCAAGAATCCGTATCTG | + |
Preference number: 6 (lower is better) Translates to: LEMAAKASAQVG*MYLSGSKNPYL Trigger: CAGATACGGATTCTTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS TCA 72 bp | ATAAAGTCCACAGTAGGTTTCAGAGCAGGAGGAACTTaGCGCACCTTTCTCACACCAGTGTTTGGAAGCGAA | + |
Preference number: 6 (lower is better) Translates to: IKSTVGFRAGGT*RTFLTPVFGSE Trigger: TTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAACCTACTGTGGACTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CAA 90 bp | CAAACTATTTTAGAGATGGCGGCCAAAGCTTCTGCACAAGTGGGTTaGATGTATCTCTCAGGCAGCAAGAATCCGTATCTGCCTGTATCT | + |
Preference number: 6 (lower is better) Translates to: QTILEMAAKASAQVG*MYLSGSKNPYLPVS Trigger: AGATACAGGCAGATACGGATTCTTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAAAATAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 72 bp | CTTCGCTGGCCACTAGAGACAGTTCTTCGTGGTCCTTaGTTTTGCTTCTGTTATAGGAATAGGGAAACAGTA | + |
Preference number: 6 (lower is better) Translates to: LRWPLETVLRGP*FCFCYRNRETV Trigger: TACTGTTTCCCTATTCCTATAACAGAAGCAAAAGCAAGGACCACGAAGAACTGTCTCTAGTGGCCAGCGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 72 bp | ATGCCAAACTATTTTAGAGATGGCGGCCAAAGCTTCTaGACAAGTGGGTTTGATGTATCTCTCAGGCAGCAA | + |
Preference number: 6 (lower is better) Translates to: MPNYFRDGGQSF*TSGFDVSLRQQ Trigger: TTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAAAATAGTTTGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CCA 72 bp | GACTTCCTTTTTCTTCTCGATGAATTCAGCTGTCACTaGCTGCCAGAGAACGACCTCATACGTTGTAGTAAG | + |
Preference number: 6 (lower is better) Translates to: DFLFLLDEFSCH*LPENDLIRCSK Trigger: CTTACTACAACGTATGAGGTCGTTCTCTGGCAGCCAGTGACAGCTGAATTCATCGAGAAGAAAAAGGAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 72 bp | TCCTTTTTCTTCTCGATGAATTCAGCTGTCACTGGCTaGCAGAGAACGACCTCATACGTTGTAGTAAGATTC | + |
Preference number: 6 (lower is better) Translates to: SFFFSMNSAVTG*QRTTSYVVVRF Trigger: GAATCTTACTACAACGTATGAGGTCGTTCTCTGGCAGCCAGTGACAGCTGAATTCATCGAGAAGAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS GCA 72 bp | TGGCCACTAGAGACAGTTCTTCGTGGTCCTTGCTTTTaGTTCTGTTATAGGAATAGGGAAACAGTATTTGTT | + |
Preference number: 6 (lower is better) Translates to: WPLETVLRGPCF*FCYRNRETVFV Trigger: AACAAATACTGTTTCCCTATTCCTATAACAGAAGCAAAAGCAAGGACCACGAAGAACTGTCTCTAGTGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS CAA 90 bp | CTGACCGTGTCATTGAAAGTCTGCTGTTCAATTAGGTCCTCCACGTaGTTCATCAGAACGTTAAATGGAATTCTGCTCACATTTAAATGC | + |
Preference number: 6 (lower is better) Translates to: LTVSLKVCCSIRSST*FIRTLNGILLTFKC Trigger: GCATTTAAATGTGAGCAGAATTCCATTTAACGTTCTGATGAACAACGTGGAGGACCTAATTGAACAGCAGACTTTCAATGACACGGTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |
||
CDS TCA 72 bp | AGATTTTCTGGAGCATGTCAGGATGCTGTTCAGTTATaGCTTCTATCCAGGAATAGATTTCATTTAGCGAGT | + |
Preference number: 6 (lower is better) Translates to: RFSGACQDAVQL*LLSRNRFHLAS Trigger: ACTCGCTAAATGAAATCTATTCCTGGATAGAAGTCATAACTGAACAGCATCCTGACATGCTCCAGAAAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022576.10 |