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Pregenerated sensors for CPB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021999

Ensembl transcript IDs: ENSMUST00000022576.10

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTTTCTCACACCAGTGTTTGGAAGCGAAGTTCCTGTTCAGGTCTGTaGCCACGCAGCGGTTGTTCTTGTGAGCAGAGCGGTTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSHTSVWKRSSCSGL*PRSGCSCEQSGSSS
Trigger: GGAGGAAGAACCGCTCTGCTCACAAGAACAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CCA 90 bp TTTCAGAGCAGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTTaGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACGCAGCGGTTGT +
Preference number: 5 (lower is better)
Translates to: FQSRRNLTHLSHTSV*KRSSCSGLCPRSGC
Trigger: ACAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 90 bp CACGAACTGCTTCGCTGGCCACTAGAGACAGTTCTTCGTGGTCCTTaGTTTTGCTTCTGTTATAGGAATAGGGAAACAGTATTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: HELLRWPLETVLRGP*FCFCYRNRETVFVG
Trigger: CCCAACAAATACTGTTTCCCTATTCCTATAACAGAAGCAAAAGCAAGGACCACGAAGAACTGTCTCTAGTGGCCAGCGAAGCAGTTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 90 bp CCTGATGACATGCCAAACTATTTTAGAGATGGCGGCCAAAGCTTCTaGACAAGTGGGTTTGATGTATCTCTCAGGCAGCAAGAATCCGTA +
Preference number: 5 (lower is better)
Translates to: PDDMPNYFRDGGQSF*TSGFDVSLRQQESV
Trigger: TACGGATTCTTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAAAATAGTTTGGCATGTCATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 90 bp GTAAGCTTTAATGTGGTCGATATTTCTTCTCAAGAAGTCAGCCACTaGCTTCACCTCTGGCTCAGACTCAGGATAAAGTCCACAGTAGGT +
Preference number: 5 (lower is better)
Translates to: VSFNVVDISSQEVSH*LHLWLRLRIKSTVG
Trigger: ACCTACTGTGGACTTTATCCTGAGTCTGAGCCAGAGGTGAAGGCAGTGGCTGACTTCTTGAGAAGAAATATCGACCACATTAAAGCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS TCA 90 bp TCTTTTTCCACGTGTAGTCATAGCCATCCACGTTCATCACGGGCATaGTGTAGAAATCCACGTGCCTCAGAAGTCTGGTATACAGATTTT +
Preference number: 5 (lower is better)
Translates to: SFSTCSHSHPRSSRA*CRNPRASEVWYTDF
Trigger: AAAATCTGTATACCAGACTTCTGAGGCACGTGGATTTCTACATCATGCCCGTGATGAACGTGGATGGCTATGACTACACGTGGAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS TCA 90 bp ATCCGATGTAGATTTTCTGGAGCATGTCAGGATGCTGTTCAGTTATaGCTTCTATCCAGGAATAGATTTCATTTAGCGAGTGATACTGCT +
Preference number: 5 (lower is better)
Translates to: IRCRFSGACQDAVQL*LLSRNRFHLASDTA
Trigger: AGCAGTATCACTCGCTAAATGAAATCTATTCCTGGATAGAAGTCATAACTGAACAGCATCCTGACATGCTCCAGAAAATCTACATCGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 72 bp GCGGAGGCGCGGGGGCTGACCGTGTCATTGAAAGTCTaGTGTTCAATTAGGTCCTCCACGTTGTTCATCAGA +
Preference number: 6 (lower is better)
Translates to: AEARGLTVSLKV*CSIRSSTLFIR
Trigger: TCTGATGAACAACGTGGAGGACCTAATTGAACAGCAGACTTTCAATGACACGGTCAGCCCCCGCGCCTCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 72 bp ACCAGTGTTTGGAAGCGAAGTTCCTGTTCAGGTCTGTaGCCACGCAGCGGTTGTTCTTGTGAGCAGAGCGGT +
Preference number: 6 (lower is better)
Translates to: TSVWKRSSCSGL*PRSGCSCEQSG
Trigger: ACCGCTCTGCTCACAAGAACAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CAA 90 bp GTTTCAGAGCAGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTaGGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACGCAGCGGTTG +
Preference number: 6 (lower is better)
Translates to: VSEQEELDAPFSHQC*EAKFLFRSVPTQRL
Trigger: CAACCGCTGCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CCA 72 bp AGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTTaGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACGC +
Preference number: 6 (lower is better)
Translates to: RRNLTHLSHTSV*KRSSCSGLCPR
Trigger: GCGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CAA 72 bp CAGGAGGAACTTGACGCACCTTTCTCACACCAGTGTTaGGAAGCGAAGTTCCTGTTCAGGTCTGTGCCCACG +
Preference number: 6 (lower is better)
Translates to: QEELDAPFSHQC*EAKFLFRSVPT
Trigger: CGTGGGCACAGACCTGAACAGGAACTTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS TCA 72 bp CTGTTCAGGTCTGTGCCCACGCAGCGGTTGTTCTTGTaGGCAGAGCGGTTCTTCCTCCACATTCGATTCTTT +
Preference number: 6 (lower is better)
Translates to: LFRSVPTQRLFL*AERFFLHIRFF
Trigger: AAAGAATCGAATGTGGAGGAAGAACCGCTCTGCTCACAAGAACAACCGCTGCGTGGGCACAGACCTGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS TCA 72 bp CACTCTGAAAGGCGAAGCCATGCTGCTCATAGAGGATaGTGGCTACCAGGATTCCAAGGCCATGAAGCTTCA +
Preference number: 6 (lower is better)
Translates to: HSERRSHAAHRG*WLPGFQGHEAS
Trigger: TGAAGCTTCATGGCCTTGGAATCCTGGTAGCCATCATCCTCTATGAGCAGCATGGCTTCGCCTTTCAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS TCA 72 bp ACGTGTAGTCATAGCCATCCACGTTCATCACGGGCATaGTGTAGAAATCCACGTGCCTCAGAAGTCTGGTAT +
Preference number: 6 (lower is better)
Translates to: TCSHSHPRSSRA*CRNPRASEVWY
Trigger: ATACCAGACTTCTGAGGCACGTGGATTTCTACATCATGCCCGTGATGAACGTGGATGGCTATGACTACACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CAA 72 bp GATAAAGTCCACAGTAGGTTTCAGAGCAGGAGGAACTaGACGCACCTTTCTCACACCAGTGTTTGGAAGCGA +
Preference number: 6 (lower is better)
Translates to: DKVHSRFQSRRN*THLSHTSVWKR
Trigger: TCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAACCTACTGTGGACTTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CAA 72 bp TTAGAGATGGCGGCCAAAGCTTCTGCACAAGTGGGTTaGATGTATCTCTCAGGCAGCAAGAATCCGTATCTG +
Preference number: 6 (lower is better)
Translates to: LEMAAKASAQVG*MYLSGSKNPYL
Trigger: CAGATACGGATTCTTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS TCA 72 bp ATAAAGTCCACAGTAGGTTTCAGAGCAGGAGGAACTTaGCGCACCTTTCTCACACCAGTGTTTGGAAGCGAA +
Preference number: 6 (lower is better)
Translates to: IKSTVGFRAGGT*RTFLTPVFGSE
Trigger: TTCGCTTCCAAACACTGGTGTGAGAAAGGTGCGTCAAGTTCCTCCTGCTCTGAAACCTACTGTGGACTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CAA 90 bp CAAACTATTTTAGAGATGGCGGCCAAAGCTTCTGCACAAGTGGGTTaGATGTATCTCTCAGGCAGCAAGAATCCGTATCTGCCTGTATCT +
Preference number: 6 (lower is better)
Translates to: QTILEMAAKASAQVG*MYLSGSKNPYLPVS
Trigger: AGATACAGGCAGATACGGATTCTTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAAAATAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 72 bp CTTCGCTGGCCACTAGAGACAGTTCTTCGTGGTCCTTaGTTTTGCTTCTGTTATAGGAATAGGGAAACAGTA +
Preference number: 6 (lower is better)
Translates to: LRWPLETVLRGP*FCFCYRNRETV
Trigger: TACTGTTTCCCTATTCCTATAACAGAAGCAAAAGCAAGGACCACGAAGAACTGTCTCTAGTGGCCAGCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 72 bp ATGCCAAACTATTTTAGAGATGGCGGCCAAAGCTTCTaGACAAGTGGGTTTGATGTATCTCTCAGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: MPNYFRDGGQSF*TSGFDVSLRQQ
Trigger: TTGCTGCCTGAGAGATACATCAAACCCACTTGTGCAGAAGCTTTGGCCGCCATCTCTAAAATAGTTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CCA 72 bp GACTTCCTTTTTCTTCTCGATGAATTCAGCTGTCACTaGCTGCCAGAGAACGACCTCATACGTTGTAGTAAG +
Preference number: 6 (lower is better)
Translates to: DFLFLLDEFSCH*LPENDLIRCSK
Trigger: CTTACTACAACGTATGAGGTCGTTCTCTGGCAGCCAGTGACAGCTGAATTCATCGAGAAGAAAAAGGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 72 bp TCCTTTTTCTTCTCGATGAATTCAGCTGTCACTGGCTaGCAGAGAACGACCTCATACGTTGTAGTAAGATTC +
Preference number: 6 (lower is better)
Translates to: SFFFSMNSAVTG*QRTTSYVVVRF
Trigger: GAATCTTACTACAACGTATGAGGTCGTTCTCTGGCAGCCAGTGACAGCTGAATTCATCGAGAAGAAAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS GCA 72 bp TGGCCACTAGAGACAGTTCTTCGTGGTCCTTGCTTTTaGTTCTGTTATAGGAATAGGGAAACAGTATTTGTT +
Preference number: 6 (lower is better)
Translates to: WPLETVLRGPCF*FCYRNRETVFV
Trigger: AACAAATACTGTTTCCCTATTCCTATAACAGAAGCAAAAGCAAGGACCACGAAGAACTGTCTCTAGTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS CAA 90 bp CTGACCGTGTCATTGAAAGTCTGCTGTTCAATTAGGTCCTCCACGTaGTTCATCAGAACGTTAAATGGAATTCTGCTCACATTTAAATGC +
Preference number: 6 (lower is better)
Translates to: LTVSLKVCCSIRSST*FIRTLNGILLTFKC
Trigger: GCATTTAAATGTGAGCAGAATTCCATTTAACGTTCTGATGAACAACGTGGAGGACCTAATTGAACAGCAGACTTTCAATGACACGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10
CDS TCA 72 bp AGATTTTCTGGAGCATGTCAGGATGCTGTTCAGTTATaGCTTCTATCCAGGAATAGATTTCATTTAGCGAGT +
Preference number: 6 (lower is better)
Translates to: RFSGACQDAVQL*LLSRNRFHLAS
Trigger: ACTCGCTAAATGAAATCTATTCCTGGATAGAAGTCATAACTGAACAGCATCCTGACATGCTCCAGAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022576.10