Pregenerated sensors for CPB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011463Ensembl transcript IDs: ENSMUST00000011607.6
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCATGGTTGTAAGGTCAGTGCATCAAGCTGTAAACATGCAATCTTaGCTCTGCCTGATGCGGATCTTCTCTCCTTCCGTTGCCTTCCGT | + |
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Preference number: 1 (lower is better) Translates to: PMVVRSVHQAVNMQS*LCLMRIFSPSVAFR Trigger: ACGGAAGGCAACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACAGCTTGATGCACTGACCTTACAACCATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR TCA 90 bp | GGAGTAGTTTCTCCACATCTGACAATACCAGTACATGTGCACAGCTaGCATGCTCATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: GVVSPHLTIPVHVHS*HAHYSQSLSLPKAG Trigger: GCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATGAGCATGTCAGCTGTGCACATGTACTGGTATTGTCAGATGTGGAGAAACTACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR GCA 90 bp | AGTTTCTCCACATCTGACAATACCAGTACATGTGCACAGCTGACATaGTCATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCT | + |
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Preference number: 1 (lower is better) Translates to: SFSTSDNTSTCAQLT*SLFTVTLPPQSRQS Trigger: AGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATGAGCATGTCAGCTGTGCACATGTACTGGTATTGTCAGATGTGGAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CCA 90 bp | CCTATTCATAAGCTTTCCATTATAACCAGGCTTCTTTGTCAGTATTaGTCAACTCCAGAAGGAGTAGTTTCTCCACATCTGACAATACCA | + |
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Preference number: 1 (lower is better) Translates to: PIHKLSIITRLLCQY*STPEGVVSPHLTIP Trigger: TGGTATTGTCAGATGTGGAGAAACTACTCCTTCTGGAGTTGACCAATACTGACAAAGAAGCCTGGTTATAATGGAAAGCTTATGAATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CAA 90 bp | TCCCATGGTTGTAAGGTCAGTGCATCAAGCTGTAAACATGCAATCTaGGCTCTGCCTGATGCGGATCTTCTCTCCTTCCGTTGCCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: SHGCKVSASSCKHAI*ALPDADLLSFRCLP Trigger: CGGAAGGCAACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACAGCTTGATGCACTGACCTTACAACCATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR-3UTR GCA 90 bp | AACCAGGCTTCTTTGTCAGTATTGGTCAACTCCAGAAGGAGTAGTTTCTCCACATGTGCACAGCTGACATaGTCATTATTCACAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: NQASLSVLVNSRRSSFSTCAQLT*SLFTVT Trigger: AGTGACTGTGAATAATGAGCATGTCAGCTGTGCACA...TGTGGAGAAACTACTCCTTCTGGAGTTGACCAATACTGACAAAGAAGCCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR-3UTR TCA 90 bp | CCATGGCTTCCCATGGTTGTAAGGTCAGTGCATCAAGCTGTAAACATGCAATCTATTATGTCACTTGAATaGGCTGAGATAAAACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: PWLPMVVRSVHQAVNMQSIMSLE*AEIKPK Trigger: CTTGGGTTTTATCTCAGCTCATTCAAGTGACATAAT...AGATTGCATGTTTACAGCTTGATGCACTGACCTTACAACCATGGGAAGCCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR-3UTR GCA 90 bp | GTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTTTTTACAGTCTTCACTaGCCACTATGTATTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: VIEWLLLLLLVQLVQPACFYSLH*PLCIFL Trigger: TAGGAAAATACATAGTGGGCAGTGAAGACTGTAAAA...ACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR-3UTR GCA 90 bp | AGCATGTCTTGTCTTACTTCCAGTCTGCTTGCCACAATCAGCTCTTCCAAGAAGAGAAAGATTAGAATCTaGAAACCTCCAAACAAACGA | + |
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Preference number: 2 (lower is better) Translates to: SMSCLTSSLLATISSSKKRKIRI*KPPNKR Trigger: TCGTTTGTTTGGAGGTTTGCAGATTCTAATCTTTCT...CTTCTTGGAAGAGCTGATTGTGGCAAGCAGACTGGAAGTAAGACAAGACATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CAA 90 bp | CCAACTCTCCCAATTCCTTCTTCATTGAGTTTCTTTCATTACCATTaGAACAATCACAGGAAGTTCTGGATGTCACTTTGTACGGTATAT | + |
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Preference number: 2 (lower is better) Translates to: PTLPIPSSLSFFHYH*NNHRKFWMSLCTVY Trigger: ATATACCGTACAAAGTGACATCCAGAACTTCCTGTGATTGTTCAAATGGTAATGAAAGAAACTCAATGAAGAAGGAATTGGGAGAGTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR GCA 72 bp | TCAGTGCATCAAGCTGTAAACATGCAATCTTGGCTCTaGCTGATGCGGATCTTCTCTCCTTCCGTTGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SVHQAVNMQSWL*LMRIFSPSVAF Trigger: GAAGGCAACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACAGCTTGATGCACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR TCA 72 bp | TCTCCACATCTGACAATACCAGTACATGTGCACAGCTaGCATGCTCATTATTCACAGTCACTCTCCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: SPHLTIPVHVHS*HAHYSQSLSLP Trigger: GGGGAGGGAGAGTGACTGTGAATAATGAGCATGTCAGCTGTGCACATGTACTGGTATTGTCAGATGTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CCA 72 bp | GTAAGGTCAGTGCATCAAGCTGTAAACATGCAATCTTaGCTCTGCCTGATGCGGATCTTCTCTCCTTCCGTT | + |
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Preference number: 3 (lower is better) Translates to: VRSVHQAVNMQS*LCLMRIFSPSV Trigger: AACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACAGCTTGATGCACTGACCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTCTTGTCTATAACCAGGCTTCTTaGTCAGTATTGGTCAACTCC | + |
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Preference number: 3 (lower is better) Translates to: EWLLLLLLVQLVQPACLVYNQAS*SVLVNS Trigger: GGAGTTGACCAATACTGACAAAGAAGCCTGGTTATA...GACAAGACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR GCA 72 bp | ACATCTGACAATACCAGTACATGTGCACAGCTGACATaGTCATTATTCACAGTCACTCTCCCTCCCCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: TSDNTSTCAQLT*SLFTVTLPPQS Trigger: GCTTTGGGGAGGGAGAGTGACTGTGAATAATGAGCATGTCAGCTGTGCACATGTACTGGTATTGTCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CCA 72 bp | ACTCTGGTAAAGTCATTCAACACGCACCATCTTCCATaGCTTCCCATGGTTGTAAGGTCAGTGCATCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: TLVKSFNTHHLP*LPMVVRSVHQA Trigger: AGCTTGATGCACTGACCTTACAACCATGGGAAGCCATGGAAGATGGTGCGTGTTGAATGACTTTACCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCTGCTGTTTTTTTTCAGGGGTCCAATaGGTCATTACATCAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: MLIIHSHSPSPKQAICCFFSGVQ*VITSRK Trigger: TTTTCTTGATGTAATGACCAATTGGACCCCTGAAAA...AAAACAGCAGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATGAGCAT 42% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CCA 72 bp | AAGCTTTCCATTATAACCAGGCTTCTTTGTCAGTATTaGTCAACTCCAGAAGGAGTAGTTTCTCCACATCTG | + |
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Preference number: 3 (lower is better) Translates to: KLSIITRLLCQY*STPEGVVSPHL Trigger: CAGATGTGGAGAAACTACTCCTTCTGGAGTTGACCAATACTGACAAAGAAGCCTGGTTATAATGGAAAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CCA 72 bp | AAATGTCATTTCATGTGTGATGTGTTAGTCATAGAGTaGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: KCHFMCDVLVIE*LLLLLLVQLVQ Trigger: TTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACTAACACATCACACATGAAATGACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | TGTAAACATGCAATCTTGGCTCTGCCTGATGCGGATCTTCTCTCCTTCCGTTGCCGGTCAGATAGGCCTTaGTGGAGGAGAGGTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CKHAILALPDADLLSFRCRSDRP*WRRGSG Trigger: GCCAGAACCTCTCCTCCATCAAGGCCTATCTGACCG...GCAACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | AGTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTTCTCCTCAGAAGCATaGGCCAGGGCCACACTCACC | + |
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Preference number: 4 (lower is better) Translates to: SHRVAFASFTGPAGPTSMFSSEA*ARATLT Trigger: GGTGAGTGTGGCCCTGGCTCATGCTTCTGAGGAGAA...CATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR GCA 90 bp | TACTGGTCCAGCTGGTCCAACCAGCATGTCTTGTCTTACTTCCAGTCTGCTTGCCTGGCGGATGAAATCTaGCAGGGCCTTTGTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YWSSWSNQHVLSYFQSACLADEI*QGLCLF Trigger: AAAGAGACAAAGGCCCTGGCAGATTTCATCCGCCAG...GCAAGCAGACTGGAAGTAAGACAAGACATGCTGGTTGGACCAGCTGGACCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | ATGCTCATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCTGCTGTTTTAGAGGTTCTGGCGGATaGAATCTGCCAGGGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: MLIIHSHSPSPKQAICCFRGSGG*NLPGPL Trigger: CAAAGGCCCTGGCAGATTTCATCCGCCAGAACCTCT...AAAACAGCAGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | TACTGGTCCAGCTGGTCCAACCAGCATGTCTTGTCTTACTTCCAGTCTGCTTGCATCCACTCTCTTGCGTaGAAACCACAGTCGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: YWSSWSNQHVLSYFQSACIHSLA*KPQSMK Trigger: CTTCATCGACTGTGGTTTCCACGCAAGAGAGTGGAT...GCAAGCAGACTGGAAGTAAGACAAGACATGCTGGTTGGACCAGCTGGACCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | AGTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGATGGAGGAGAGGTTCTaGCGGATGAAATCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SHRVAFASFTGPAGPTSMMEERF*RMKSAR Trigger: CCTGGCAGATTTCATCCGCCAGAACCTCTCCTCCAT...CATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | TGTAAACATGCAATCTTGGCTCTGCCTGATGCGGATCTTCTCTCCTTCCGTTGCGGCCATATGTGTACTTaGTGCCATGCAGAGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CKHAILALPDADLLSFRCGHMCT*CHAEWK Trigger: TTTCCACTCTGCATGGCACCAAGTACACATATGGCC...GCAACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CAA 72 bp | TTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTCTaGTCTTACTTCCAGTCTGCTTGCCACAATCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: FFYWSSWSNQHV*SYFQSACHNQL Trigger: GAGCTGATTGTGGCAAGCAGACTGGAAGTAAGACAAGACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR GCA 90 bp | AGTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGAGAAATCCACTCTCTTaGGTGGAAACCACAGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: SHRVAFASFTGPAGPTSMRNPLS*VETTVD Trigger: ATCGACTGTGGTTTCCACGCAAGAGAGTGGATTTCT...CATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | ATGCTCATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCTGCTGTTTTCCCAGTTGTTGTACTTaGTGTAGCTGTGTCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: MLIIHSHSPSPKQAICCFPSCCT*CSCVHL Trigger: CAAGTGGACACAGCTACACCAAGTACAACAACTGGG...AAAACAGCAGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | CATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCTGCTGTTTTCCAATGATCGTTGTAGCTCCTaGGCCATATGTGTACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: HYSQSLSLPKAGNLLFSNDRCSS*AICVLG Trigger: ACCAAGTACACATATGGCCCAGGAGCTACAACGATC...ATTGGAAAACAGCAGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | ATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTCTTCATAGCCGTCAATGTTaGCCACAGGCAGAACATAAA | + |
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Preference number: 4 (lower is better) Translates to: IEWLLLLLLVQLVQPACLHSRQC*PQAEHK Trigger: TTTATGTTCTGCCTGTGGTCAACATTGACGGCTATG...AAGACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | CCATGGCTTCCCATGGTTGTAAGGTCAGTGCATCAAGCTGTAAACATGCAATCTCTTTGTCTCTTTTTCTaGCTCTGGAGTTGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: PWLPMVVRSVHQAVNMQSLCLFF*LWSWST Trigger: TGTGGACCAACTCCAGAGTCAGAAAAAGAGACAAAG...AGATTGCATGTTTACAGCTTGATGCACTGACCTTACAACCATGGGAAGCCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | AGTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGAATTGGCAATGTACTTaGCTGCAAGCATTGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SHRVAFASFTGPAGPTSMNWQCT*LQALSP Trigger: AGGAGACAATGCTTGCAGTCAAGTACATTGCCAATT...CATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR GCA 90 bp | ATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTCTTCATATGTGTACTTGGTaGCATGCAGAGTGGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: IEWLLLLLLVQLVQPACLHMCTW*HAEWKA Trigger: AGCTTTCCACTCTGCATGGCACCAAGTACACATATG...AAGACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | AACCAGGCTTCTTTGTCAGTATTGGTCAACTCCAGAAGGAGTAGTTTCTCCACAGTGTTGGCTAGTTCCTaGATTAAGCTGACGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: NQASLSVLVNSRRSSFSTVLASS*IKLTSS Trigger: AGATGACGTCAGCTTAATTCAGGAACTAGCCAACAC...TGTGGAGAAACTACTCCTTCTGGAGTTGACCAATACTGACAAAGAAGCCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR GCA 90 bp | ATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTCTTAAACCACTGACAGAATaGAGGAGAAATCCACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: IEWLLLLLLVQLVQPACLKPLTE*RRNPLS Trigger: AGAGAGTGGATTTCTCCTGCATTCTGTCAGTGGTTT...AAGACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | GAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTCTTGTCCTTAGAAACAAGGTCTaGATTATCATTGGCAACTTG | + |
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Preference number: 4 (lower is better) Translates to: EWLLLLLLVQLVQPACLVLRNKV*IIIGNL Trigger: CAAGTTGCCAATGATAATCCAGACCTTGTTTCTAAG...GACAAGACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | CATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCTGCTGTTTTCCAATCATCAAAATTTCTGTTaGGGTCTACACCAAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HYSQSLSLPKAGNLLFSNHQNFC*GLHQSR Trigger: CCTGCTTTGGTGTAGACCCCAACAGAAATTTTGATG...ATTGGAAAACAGCAGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| 3UTR CAA 72 bp | CATTTCATGTGTGATGTGTTAGTCATAGAGTGGCTTTaGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HFMCDVLVIEWL*LLLLVQLVQPA Trigger: TGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACTAACACATCACACATGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR GCA 90 bp | AGAATCTGCAAACCTCCAAACAAACGAAGTCACATCAGACAAGGAATGAACAGTGTGTACTTGGTGCCATaGAGAGTGGAAAGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RICKPPNKRSHIRQGMNSVYLVP*RVESSF Trigger: AAAGGAGCTTTCCACTCTGCATGGCACCAAGTACAC...ACTGTTCATTCCTTGTCTGATGTGACTTCGTTTGTTTGGAGGTTTGCAGATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | AGTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGAGAAATCAATCTGTTTaGTGTTGGCTAGTTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SHRVAFASFTGPAGPTSMRNQSV*CWLVPE Trigger: TTCAGGAACTAGCCAACACCAAACAGATTGATTTCT...CATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | TCCAGTCTGCTTGCCACAATCAGCTCTTCCAAGAAGACTCTGGTAAAGTCATTCGGTCTGGATTATCATTaGCAACTTGTTGAATCCATG | + |
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Preference number: 4 (lower is better) Translates to: SSLLATISSSKKTLVKSFGLDYH*QLVESM Trigger: CATGGATTCAACAAGTTGCCAATGATAATCCAGACC...GAATGACTTTACCAGAGTCTTCTTGGAAGAGCTGATTGTGGCAAGCAGACTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | CATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCTGCTGTTTTCCAATGAAGGCAGGCTTATTTaGTCTATCTTTGCCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: HYSQSLSLPKAGNLLFSNEGRLI*SIFANL Trigger: AAGATTGGCAAAGATAGACCAAATAAGCCTGCCTTC...ATTGGAAAACAGCAGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR TCA 90 bp | AGGAGTAGTTTCTCCACATCTGACAATACCAGTACATGTGCACAGCTGACATGCTATCTTTGCCAATCTTaGGAACATACATGTTACGTC | + |
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Preference number: 4 (lower is better) Translates to: RSSFSTSDNTSTCAQLTCYLCQS*EHTCYV Trigger: GACGTAACATGTATGTTCTCAAGATTGGCAAAGATA...GCATGTCAGCTGTGCACATGTACTGGTATTGTCAGATGTGGAGAAACTACTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | CATTATTCACAGTCACTCTCCCTCCCCAAAGCAGGCAATCTGCTGTTTTCCAATTTGTGTAGCAGAATCTaGTTTCCAGAAATCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: HYSQSLSLPKAGNLLFSNLCSRI*FPEINL Trigger: CAGATTGATTTCTGGAAACCAGATTCTGCTACACAA...ATTGGAAAACAGCAGATTGCCTGCTTTGGGGAGGGAGAGTGACTGTGAATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR GCA 90 bp | ATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTCTTATCAACGACATCTTCTaGTTTAACATGAAAGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: IEWLLLLLLVQLVQPACLINDIF*FNMKVN Trigger: GTTGACTTTCATGTTAAAGCAGAAGATGTCGTTGAT...AAGACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | AGAATCTGCAAACCTCCAAACAAACGAAGTCACATCAGACAAGGAATGAACAGTGTGTGGCTGTCAAACTaGGATTCCAGAATATGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RICKPPNKRSHIRQGMNSVWLSN*DSRICF Trigger: GAAACATATTCTGGAATCCCAGTTTGACAGCCACAC...ACTGTTCATTCCTTGTCTGATGTGACTTCGTTTGTTTGGAGGTTTGCAGATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS-3UTR CCA 90 bp | AGAATCTGCAAACCTCCAAACAAACGAAGTCACATCAGACAAGGAATGAACAGTCAATCTGTTTGGTGTTaGCTAGTTCCTGAATTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RICKPPNKRSHIRQGMNSQSVWC*LVPELS Trigger: GCTTAATTCAGGAACTAGCCAACACCAAACAGATTG...ACTGTTCATTCCTTGTCTGATGTGACTTCGTTTGTTTGGAGGTTTGCAGATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| 3UTR CAA 72 bp | CCATTTGAACAATCACAGGAAGTTCTGGATGTCACTTaGTACGGTATATTGTGGCTTATTTACCCATATTAT | + |
|
Preference number: 4 (lower is better) Translates to: PFEQSQEVLDVT*YGILWLIYPYY Trigger: ATAATATGGGTAAATAAGCCACAATATACCGTACAAAGTGACATCCAGAACTTCCTGTGATTGTTCAAATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 90 bp | GAGGTTCTGGCGGATGAAATCTGCCAGGGCCTTTGTCTCTTTTTCTaGCTCTGGAGTTGGTCCACAGTAAGTGTCAGAGCAGGGACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EVLADEICQGLCLFF*LWSWSTVSVRAGTP Trigger: CGGAGTCCCTGCTCTGACACTTACTGTGGACCAACTCCAGAGTCAGAAAAAGAGACAAAGGCCCTGGCAGATTTCATCCGCCAGAACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 90 bp | GCCATATGTGTACTTGGTGCCATGCAGAGTGGAAAGCTCCTTTGCTaGACCTTTCACCAGGGCATTCAGCTCCTCATAGTTCTCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AICVLGAMQSGKLLC*TFHQGIQLLIVLGQ Trigger: CTGCCCGAGAACTATGAGGAGCTGAATGCCCTGGTGAAAGGTGCAGCAAAGGAGCTTTCCACTCTGCATGGCACCAAGTACACATATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 90 bp | TGGGCCATATGTGTACTTGGTGCCATGCAGAGTGGAAAGCTCCTTTaGTGCACCTTTCACCAGGGCATTCAGCTCCTCATAGTTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: WAICVLGAMQSGKLL*CTFHQGIQLLIVLG Trigger: CCCGAGAACTATGAGGAGCTGAATGCCCTGGTGAAAGGTGCAGCAAAGGAGCTTTCCACTCTGCATGGCACCAAGTACACATATGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 90 bp | CTCGGGCAGCTTATAGTCGTAGGAGTAAGGATAGAGCATCATCTGTaGGTAGGAGTGGACGGTCAGATAGGCCTTGATGGAGGAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGQLIVVGVRIEHHL*VGVDGQIGLDGGEV Trigger: AACCTCTCCTCCATCAAGGCCTATCTGACCGTCCACTCCTACTCACAGATGATGCTCTATCCTTACTCCTACGACTATAAGCTGCCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 90 bp | CAACTTGTTGAATCCATGCCTCTATCGTTTCCCAGTTGTTGTACTTaGTGTAGCTGTGTCCACTTGCACGGGTGTGGCTGTCAAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLVESMPLSFPSCCT*CSCVHLHGCGCQTG Trigger: CCCAGTTTGACAGCCACACCCGTGCAAGTGGACACAGCTACACCAAGTACAACAACTGGGAAACGATAGAGGCATGGATTCAACAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | TGTAAACATGCAATCTTGGCTCTGCCTGATGCGGATCTTCTCTCCTTCCGTTGCGAGAAATCCACTCTCTaGCGTGGAAACCACAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CKHAILALPDADLLSFRCEKSTL*RGNHSR Trigger: TCGACTGTGGTTTCCACGCAAGAGAGTGGATTTCTC...GCAACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | TACTGGTCCAGCTGGTCCAACCAGCATGTCTTGTCTTACTTCCAGTCTGCTTGCTTTCTGACTCTGGAGTaGGTCCACAGTAAGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YWSSWSNQHVLSYFQSACFLTLE*VHSKCQ Trigger: CTGACACTTACTGTGGACCAACTCCAGAGTCAGAAA...GCAAGCAGACTGGAAGTAAGACAAGACATGCTGGTTGGACCAGCTGGACCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | AAGGTCAGTGCATCAAGCTGTAAACATGCAATCTTGGCTCTGCCTGATGCGGATGGGCCATATGTGTACTaGGTGCCATGCAGAGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KVSASSCKHAILALPDADGPYVY*VPCRVE Trigger: TTCCACTCTGCATGGCACCAAGTACACATATGGCCC...ATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACAGCTTGATGCACTGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 90 bp | ATGTACTTGACTGCAAGCATTGTCTCCTCACAGGTTTGGCGGATCTaGGACTCAGGAAGCAGAAAGCCAAAGAAGCCTTTATCCCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MYLTASIVSSQVWRI*DSGSRKPKKPLSRS Trigger: ACTCCGGGATAAAGGCTTCTTTGGCTTTCTGCTTCCTGAGTCTCAGATCCGCCAAACCTGTGAGGAGACAATGCTTGCAGTCAAGTACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | TGTAAACATGCAATCTTGGCTCTGCCTGATGCGGATCTTCTCTCCTTCCGTTGCAATCTGCCAGGGCCTTaGTCTCTTTTTCTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CKHAILALPDADLLSFRCNLPGP*SLFLTL Trigger: CAGAGTCAGAAAAAGAGACAAAGGCCCTGGCAGATT...GCAACGGAAGGAGAGAAGATCCGCATCAGGCAGAGCCAAGATTGCATGTTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 90 bp | CTCTATCGTTTCCCAGTTGTTGTACTTGGTGTAGCTGTGTCCACTTaGACGGGTGTGGCTGTCAAACTGGGATTCCAGAATATGTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYRFPVVVLGVAVST*TGVAVKLGFQNMFH Trigger: GTGAAACATATTCTGGAATCCCAGTTTGACAGCCACACCCGTGCAAGTGGACACAGCTACACCAAGTACAACAACTGGGAAACGATAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | GTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTGCATCAAAATTTCTGTaGGGGTCTACACCAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIEWLLLLLLVQLVQPACASKFL*GSTPKQ Trigger: CTGCTTTGGTGTAGACCCCAACAGAAATTTTGATGC...ACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | AGAATCTGCAAACCTCCAAACAAACGAAGTCACATCAGACAAGGAATGAACAGTGAGTGGAAAGCTCCTTaGCTGCACCTTTCACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RICKPPNKRSHIRQGMNSEWKAP*LHLSPG Trigger: CCCTGGTGAAAGGTGCAGCAAAGGAGCTTTCCACTC...ACTGTTCATTCCTTGTCTGATGTGACTTCGTTTGTTTGGAGGTTTGCAGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | AGTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGATCATTGGCAACTTGTaGAATCCATGCCTCTATCGT | + |
|
Preference number: 5 (lower is better) Translates to: SHRVAFASFTGPAGPTSMIIGNL*NPCLYR Trigger: ACGATAGAGGCATGGATTCAACAAGTTGCCAATGAT...CATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 90 bp | CTCTCTTGCGTGGAAACCACAGTCGATGAAGAAGGCAGGCTTATTTaGTCTATCTTTGCCAATCTTGAGAACATACATGTTACGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSCVETTVDEEGRLI*SIFANLENIHVTSF Trigger: GAAGGACGTAACATGTATGTTCTCAAGATTGGCAAAGATAGACCAAATAAGCCTGCCTTCTTCATCGACTGTGGTTTCCACGCAAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | AGGAGTAGTTTCTCCACATCTGACAATACCAGTACATGTGCACAGCTGACATGCAGAAGGCAGGCTTATTaGGTCTATCTTTGCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSFSTSDNTSTCAQLTCRRQAY*VYLCQS Trigger: AGATTGGCAAAGATAGACCAAATAAGCCTGCCTTCT...GCATGTCAGCTGTGCACATGTACTGGTATTGTCAGATGTGGAGAAACTACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | GTCATAGAGTGGCTTTTGCTTCTTTTACTGGTCCAGCTGGTCCAACCAGCATGTATTATCATTGGCAACTaGTTGAATCCATGCCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: VIEWLLLLLLVQLVQPACIIIGN*LNPCLY Trigger: ATAGAGGCATGGATTCAACAAGTTGCCAATGATAAT...ACATGCTGGTTGGACCAGCTGGACCAGTAAAAGAAGCAAAAGCCACTCTATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS-3UTR CAA 90 bp | CCATGGCTTCCCATGGTTGTAAGGTCAGTGCATCAAGCTGTAAACATGCAATCTCTATCTTTGCCAATCTaGAGAACATACATGTTACGT | + |
|
Preference number: 5 (lower is better) Translates to: PWLPMVVRSVHQAVNMQSLSLPI*RTYMLR Trigger: ACGTAACATGTATGTTCTCAAGATTGGCAAAGATAG...AGATTGCATGTTTACAGCTTGATGCACTGACCTTACAACCATGGGAAGCCATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 90 bp | ACGTCCTTCAAATGTGGTTCCAATGACTCTCTTAGAAACAAGGTCTaGATTATCATTGGCAACTTGTTGAATCCATGCCTCTATCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSFKCGSNDSLRNKV*IIIGNLLNPCLYRF Trigger: GAAACGATAGAGGCATGGATTCAACAAGTTGCCAATGATAATCCAGACCTTGTTTCTAAGAGAGTCATTGGAACCACATTTGAAGGACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 90 bp | AACTTCATTCTCCTCGAGAAAGTTCTCCACATCAACGACATCTTCTaGTTTAACATGAAAGTCAACTGTAGTAAGAGGTTTCACTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NFILLEKVLHINDIF*FNMKVNCSKRFHLC Trigger: ACACAAGTGAAACCTCTTACTACAGTTGACTTTCATGTTAAAGCAGAAGATGTCGTTGATGTGGAGAACTTTCTCGAGGAGAATGAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 72 bp | AACACCCGGTTGCCATCAAAGTTCTCCTCAGAAGCATaGGCCAGGGCCACACTCACCAGGGCCAGTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTRLPSKFSSEA*ARATLTRASSS Trigger: GCTGCTACTGGCCCTGGTGAGTGTGGCCCTGGCTCATGCTTCTGAGGAGAACTTTGATGGCAACCGGGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 72 bp | CTCCTGGGCCATATGTGTACTTGGTGCCATGCAGAGTaGAAAGCTCCTTTGCTGCACCTTTCACCAGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLGHMCTWCHAE*KAPLLHLSPGH Trigger: ATGCCCTGGTGAAAGGTGCAGCAAAGGAGCTTTCCACTCTGCATGGCACCAAGTACACATATGGCCCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 72 bp | AGATCCCCCAGCAGCAGGATAGATCGTTGTAGCTCCTaGGCCATATGTGTACTTGGTGCCATGCAGAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSPSSRIDRCSS*AICVLGAMQSG Trigger: TCCACTCTGCATGGCACCAAGTACACATATGGCCCAGGAGCTACAACGATCTATCCTGCTGCTGGGGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 90 bp | CTCCGAGAAGCTCCCACTTCACACCAGCCAGCATCAAAATTTCTGTaGGGGTCTACACCAAAGCAGGAACTTCCAGCCGTAGTAGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LREAPTSHQPASKFL*GSTPKQELPAVVER Trigger: CCGCTCTACTACGGCTGGAAGTTCCTGCTTTGGTGTAGACCCCAACAGAAATTTTGATGCTGGCTGGTGTGAAGTGGGAGCTTCTCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 90 bp | CTGGGCCATATGTGTACTTGGTGCCATGCAGAGTGGAAAGCTCCTTaGCTGCACCTTTCACCAGGGCATTCAGCTCCTCATAGTTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGHMCTWCHAEWKAP*LHLSPGHSAPHSSR Trigger: CCGAGAACTATGAGGAGCTGAATGCCCTGGTGAAAGGTGCAGCAAAGGAGCTTTCCACTCTGCATGGCACCAAGTACACATATGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 72 bp | TGTGTACTTGGTGCCATGCAGAGTGGAAAGCTCCTTTaGTGCACCTTTCACCAGGGCATTCAGCTCCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: CVLGAMQSGKLL*CTFHQGIQLLI Trigger: TATGAGGAGCTGAATGCCCTGGTGAAAGGTGCAGCAAAGGAGCTTTCCACTCTGCATGGCACCAAGTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 72 bp | GAATCCATGCCTCTATCGTTTCCCAGTTGTTGTACTTaGTGTAGCTGTGTCCACTTGCACGGGTGTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ESMPLSFPSCCT*CSCVHLHGCGC Trigger: ACAGCCACACCCGTGCAAGTGGACACAGCTACACCAAGTACAACAACTGGGAAACGATAGAGGCATGGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 72 bp | GCTCCCACTTCACACCAGCCAGCATCAAAATTTCTGTaGGGGTCTACACCAAAGCAGGAACTTCCAGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: APTSHQPASKFL*GSTPKQELPAV Trigger: TACGGCTGGAAGTTCCTGCTTTGGTGTAGACCCCAACAGAAATTTTGATGCTGGCTGGTGTGAAGTGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 72 bp | ATGTGTACTTGGTGCCATGCAGAGTGGAAAGCTCCTTaGCTGCACCTTTCACCAGGGCATTCAGCTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: MCTWCHAEWKAP*LHLSPGHSAPH Trigger: ATGAGGAGCTGAATGCCCTGGTGAAAGGTGCAGCAAAGGAGCTTTCCACTCTGCATGGCACCAAGTACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 72 bp | GCGGATGAAATCTGCCAGGGCCTTTGTCTCTTTTTCTaGCTCTGGAGTTGGTCCACAGTAAGTGTCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ADEICQGLCLFF*LWSWSTVSVRA Trigger: TGCTCTGACACTTACTGTGGACCAACTCCAGAGTCAGAAAAAGAGACAAAGGCCCTGGCAGATTTCATCCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 72 bp | TTCCCAGTTGTTGTACTTGGTGTAGCTGTGTCCACTTaGACGGGTGTGGCTGTCAAACTGGGATTCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FPVVVLGVAVST*TGVAVKLGFQN Trigger: ATTCTGGAATCCCAGTTTGACAGCCACACCCGTGCAAGTGGACACAGCTACACCAAGTACAACAACTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 72 bp | TTTCCCAGTTGTTGTACTTGGTGTAGCTGTGTCCACTaGCACGGGTGTGGCTGTCAAACTGGGATTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FPSCCTWCSCVH*HGCGCQTGIPE Trigger: TTCTGGAATCCCAGTTTGACAGCCACACCCGTGCAAGTGGACACAGCTACACCAAGTACAACAACTGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 72 bp | ACTGCAAGCATTGTCTCCTCACAGGTTTGGCGGATCTaGGACTCAGGAAGCAGAAAGCCAAAGAAGCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TASIVSSQVWRI*DSGSRKPKKPL Trigger: TAAAGGCTTCTTTGGCTTTCTGCTTCCTGAGTCTCAGATCCGCCAAACCTGTGAGGAGACAATGCTTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 90 bp | CCTCTATCGTTTCCCAGTTGTTGTACTTGGTGTAGCTGTGTCCACTaGCACGGGTGTGGCTGTCAAACTGGGATTCCAGAATATGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLSFPSCCTWCSCVH*HGCGCQTGIPEYVS Trigger: TGAAACATATTCTGGAATCCCAGTTTGACAGCCACACCCGTGCAAGTGGACACAGCTACACCAAGTACAACAACTGGGAAACGATAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 72 bp | CTTATAGTCGTAGGAGTAAGGATAGAGCATCATCTGTaGGTAGGAGTGGACGGTCAGATAGGCCTTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LIVVGVRIEHHL*VGVDGQIGLDG Trigger: TCCATCAAGGCCTATCTGACCGTCCACTCCTACTCACAGATGATGCTCTATCCTTACTCCTACGACTATAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 72 bp | AATGTACTTGACTGCAAGCATTGTCTCCTCACAGGTTaGGCGGATCTGAGACTCAGGAAGCAGAAAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: NVLDCKHCLLTG*ADLRLRKQKAK Trigger: TTTGGCTTTCTGCTTCCTGAGTCTCAGATCCGCCAAACCTGTGAGGAGACAATGCTTGCAGTCAAGTACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 90 bp | ATAATTGGCAATGTACTTGACTGCAAGCATTGTCTCCTCACAGGTTaGGCGGATCTGAGACTCAGGAAGCAGAAAGCCAAAGAAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IIGNVLDCKHCLLTG*ADLRLRKQKAKEAF Trigger: AAAGGCTTCTTTGGCTTTCTGCTTCCTGAGTCTCAGATCCGCCAAACCTGTGAGGAGACAATGCTTGCAGTCAAGTACATTGCCAATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 72 bp | GAGAAATCCACTCTCTTGCGTGGAAACCACAGTCGATaGAGAAGGCAGGCTTATTTGGTCTATCTTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: EKSTLLRGNHSR*RRQAYLVYLCQ Trigger: TTGGCAAAGATAGACCAAATAAGCCTGCCTTCTTCATCGACTGTGGTTTCCACGCAAGAGAGTGGATTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 90 bp | AACATAAAAGTCCAGTTCGTCAAGAAGTCGTTTCATGTGGATCTCTaGTTTATAGGTACGGACAGCCTCTCTCACAAACCACTGACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: NIKVQFVKKSFHVDL*FIGTDSLSHKPLTE Trigger: TTCTGTCAGTGGTTTGTGAGAGAGGCTGTCCGTACCTATAAACAAGAGATCCACATGAAACGACTTCTTGACGAACTGGACTTTTATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 72 bp | AAGGTCTGGATTATCATTGGCAACTTGTTGAATCCATaGCTCTATCGTTTCCCAGTTGTTGTACTTGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KVWIIIGNLLNP*LYRFPVVVLGV Trigger: TACACCAAGTACAACAACTGGGAAACGATAGAGGCATGGATTCAACAAGTTGCCAATGATAATCCAGACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 72 bp | GTGGAAACCACAGTCGATGAAGAAGGCAGGCTTATTTaGTCTATCTTTGCCAATCTTGAGAACATACATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VETTVDEEGRLI*SIFANLENIHV Trigger: AACATGTATGTTCTCAAGATTGGCAAAGATAGACCAAATAAGCCTGCCTTCTTCATCGACTGTGGTTTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 90 bp | AATGACTCTCTTAGAAACAAGGTCTGGATTATCATTGGCAACTTGTaGAATCCATGCCTCTATCGTTTCCCAGTTGTTGTACTTGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: NDSLRNKVWIIIGNL*NPCLYRFPVVVLGV Trigger: TACACCAAGTACAACAACTGGGAAACGATAGAGGCATGGATTCAACAAGTTGCCAATGATAATCCAGACCTTGTTTCTAAGAGAGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS TCA 72 bp | AGAAGGCAGGCTTATTTGGTCTATCTTTGCCAATCTTaGGAACATACATGTTACGTCCTTCAAATGTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RRQAYLVYLCQS*EHTCYVLQMWF Trigger: GAACCACATTTGAAGGACGTAACATGTATGTTCTCAAGATTGGCAAAGATAGACCAAATAAGCCTGCCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS GCA 72 bp | CTCCTCGAGAAAGTTCTCCACATCAACGACATCTTCTaGTTTAACATGAAAGTCAACTGTAGTAAGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLEKVLHINDIF*FNMKVNCSKRF Trigger: AAACCTCTTACTACAGTTGACTTTCATGTTAAAGCAGAAGATGTCGTTGATGTGGAGAACTTTCTCGAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CCA 72 bp | AAATGTGGTTCCAATGACTCTCTTAGAAACAAGGTCTaGATTATCATTGGCAACTTGTTGAATCCATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KCGSNDSLRNKV*IIIGNLLNPCL Trigger: GAGGCATGGATTCAACAAGTTGCCAATGATAATCCAGACCTTGTTTCTAAGAGAGTCATTGGAACCACATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
||
| CDS CAA 72 bp | CTTAGAAACAAGGTCTGGATTATCATTGGCAACTTGTaGAATCCATGCCTCTATCGTTTCCCAGTTGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LRNKVWIIIGNL*NPCLYRFPVVV Trigger: TACAACAACTGGGAAACGATAGAGGCATGGATTCAACAAGTTGCCAATGATAATCCAGACCTTGTTTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS CAA 72 bp | TCTCTTAGAAACAAGGTCTGGATTATCATTGGCAACTaGTTGAATCCATGCCTCTATCGTTTCCCAGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SLRNKVWIIIGN*LNPCLYRFPVV Trigger: AACAACTGGGAAACGATAGAGGCATGGATTCAACAAGTTGCCAATGATAATCCAGACCTTGTTTCTAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS TCA 72 bp | AAGTTCTCCACATCAACGACATCTTCTGCTTTAACATaGAAGTCAACTGTAGTAAGAGGTTTCACTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: KFSTSTTSSALT*KSTVVRGFTCV Trigger: TACACAAGTGAAACCTCTTACTACAGTTGACTTTCATGTTAAAGCAGAAGATGTCGTTGATGTGGAGAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS CAA 90 bp | ATCTTCTGCTTTAACATGAAAGTCAACTGTAGTAAGAGGTTTCACTaGTGTAGCAGAATCTGGTTTCCAGAAATCAATCTGTTTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: IFCFNMKVNCSKRFH*CSRIWFPEINLFGV Trigger: AACACCAAACAGATTGATTTCTGGAAACCAGATTCTGCTACACAAGTGAAACCTCTTACTACAGTTGACTTTCATGTTAAAGCAGAAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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| CDS CAA 72 bp | TTTAACATGAAAGTCAACTGTAGTAAGAGGTTTCACTaGTGTAGCAGAATCTGGTTTCCAGAAATCAATCTG | + |
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Preference number: 6 (lower is better) Translates to: FNMKVNCSKRFH*CSRIWFPEINL Trigger: CAGATTGATTTCTGGAAACCAGATTCTGCTACACAAGTGAAACCTCTTACTACAGTTGACTTTCATGTTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011607.6 |
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