Pregenerated sensors for CPA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029788Ensembl transcript IDs: ENSMUST00000062758.11, ENSMUST00000115138.8, ENSMUST00000115139.8, ENSMUST00000165949.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAAGAGATGGCAGCCAACACTAGAGGCAGTGAGGCCTGCTCAAATTaGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: KEMAANTRGSEACSN*LLFAKGPTTVWGRD Trigger: ATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCAGGCCTCACTGCCTCTAGTGTTGGCTGCCATCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR CAA 90 bp | CAGCCAACACTAGAGGCAGTGAGGCCTGCTCAAATTTGCTTCTATTaGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCA | + |
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Preference number: 2 (lower is better) Translates to: QPTLEAVRPAQICFY*LRVQRRFGEGILNS Trigger: TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCAGGCCTCACTGCCTCTAGTGTTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTAGAGGCAGTGAGGCCTaGTCAAATTTGCTTCTATTT | + |
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Preference number: 2 (lower is better) Translates to: LALPRDWKQRELGWASYFRGSEA*SNLLLF Trigger: AAATAGAAGCAAATTTGAGCAGGCCTCACTGCCTCT...AAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR GCA 72 bp | GGCGGGGTGGGAGTGGGTGTCCCAGACATGAGGGGATaGCCAAAGAGATGGCAGCCAACACTAGAGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GGVGVGVPDMRG*PKRWQPTLEAV Trigger: CACTGCCTCTAGTGTTGGCTGCCATCTCTTTGGGCATCCCCTCATGTCTGGGACACCCACTCCCACCCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR CCA 72 bp | GCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATaGGCCTCATATTTTCCCGAAGGCAGCAAGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: ALPRDWKQRELG*ASYFPEGSKGW Trigger: CCACCCCTTGCTGCCTTCGGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR GCA 72 bp | CAGCCAACACTAGAGGCAGTGAGGCCTGCTCAAATTTaGTTCTATTTGCTAAGGGTCCAACGACGGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QPTLEAVRPAQI*FYLLRVQRRFG Trigger: CCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCAGGCCTCACTGCCTCTAGTGTTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCGAGGCCTGCTCAAATTaGCTTCTATTTGCTAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: ALPRDWKQRELGWASYFPEACSN*LLFAKG Trigger: ACCCTTAGCAAATAGAAGCAAATTTGAGCAGGCCTC...GGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCGAGGCCTGCTCAAATTaGCTTCTATTTGCTAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: WPFPGIGSKESLDGPHIFEACSN*LLFAKG Trigger: ACCCTTAGCAAATAGAAGCAAATTTGAGCAGGCCTC...GAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR GCA 72 bp | AAAGAGATGGCAGCCAACACTAGAGGCAGTGAGGCCTaGTCAAATTTGCTTCTATTTGCTAAGGGTCCAACG | + |
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Preference number: 3 (lower is better) Translates to: KEMAANTRGSEA*SNLLLFAKGPT Trigger: CGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCAGGCCTCACTGCCTCTAGTGTTGGCTGCCATCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTGAGGCTAGGTCTGGCTaGGCCACGCCAGAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCEARSG*ATPEVH Trigger: GTGGACTTCTGGCGTGGCCCAGCCAGACCTAGCCTC...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR TCA 90 bp | CGCTGTCATAAGCCCAGTCCACCGAGATCCCACTGGCTGAATAGAGGGTGGTGCTGCCGGTGGCATGGGTaGTCCACTCTCTGGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: RCHKPSPPRSHWLNRGWCCRWHG*STLWNE Trigger: TTCATTCCAGAGAGTGGATCACCCATGCCACCGGCA...GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
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| CDS-3UTR GCA 90 bp | CGCTGTCATAAGCCCAGTCCACCGAGATCCCACTGGCTGAATAGAGGGTGGTGCAGTAGCTCCGAAGCCTaGCTTCCAGTTCCTGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: RCHKPSPPRSHWLNRGWCSSSEA*LPVPVE Trigger: CTCAACAGGAACTGGAAGGCAGGCTTCGGAGCTACT...GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCGAGAGGCTAGGTCTGGCTaGGCCACGCCAGAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSQGLEAKRAWMGLIFSREARSG*ATPEVH Trigger: GTGGACTTCTGGCGTGGCCCAGCCAGACCTAGCCTC...TCGGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTCAGATGCCGGTGGCATaGGTGATCCACTCTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCQMPVA*VIHSLE Trigger: TTCCAGAGAGTGGATCACCCATGCCACCGGCATCTG...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR CCA 90 bp | CGCTGTCATAAGCCCAGTCCACCGAGATCCCACTGGCTGAATAGAGGGTGGTGCCCTGTGAAATTCACTTaGCCCCAAGCTACAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RCHKPSPPRSHWLNRGWCPVKFT*PQATAK Trigger: CTTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGG...GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
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| CDS-3UTR TCA 90 bp | CGCTGTCATAAGCCCAGTCCACCGAGATCCCACTGGCTGAATAGAGGGTGGTGCGGATGTCCTTTATCATaGTGCTGTAGGCAAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RCHKPSPPRSHWLNRGWCGCPLS*CCRQGH Trigger: ATGGCCTTGCCTACAGCATCATGATAAAGGACATCC...GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
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| CDS-3UTR TCA 90 bp | TTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTAGCTACCTCTGGCTCTaGCTCAGGTGCAGGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: LLRVQRRFGEGILNSGGFSYLWL*LRCRPS Trigger: CGAGGGCCTGCACCTGAGTCAGAGCCAGAGGTAGCT...AAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTGGCCATAAGGATACATaGCCATCTGAGAGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCGHKDT*PSESSS Trigger: GGAGCTACTCTCAGATGGTCATGTATCCTTATGGCC...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
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| CDS-3UTR CCA 90 bp | ATAGAGGGTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTGAACCTTGTTGAGGCTAGGTCTGGCTaGGCCACGCCAGAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: IEGGADAAKNVLDPVNLVEARSG*ATPEVH Trigger: GTGGACTTCTGGCGTGGCCCAGCCAGACCTAGCCTC...AACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCACCCTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
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| CDS-3UTR TCA 90 bp | AGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCAGGGTGCCGGTGGCATGGGTaGTCCACTCTCTGGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: RVQRRFGEGILNSGGFSGCRWHG*STLWNE Trigger: TTCATTCCAGAGAGTGGATCACCCATGCCACCGGCA...CCCTGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | TGCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATAGCTACCTCTGGCTCTaGCTCAGGTGCAGGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: CSNLLLFAKGPTTVWGRDSYLWL*LRCRPS Trigger: CGAGGGCCTGCACCTGAGTCAGAGCCAGAGGTAGCT...ATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR GCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTCTGAGAAGTGACAGCTaGTTCTCATTTTTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCLRSDS*FSFLAR Trigger: CCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAG...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR CCA 90 bp | AGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCAGGGCAGAAGTCCACCTTCTaGGGCTTCTGGGTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RVQRRFGEGILNSGGFSGQKSTF*GFWVSR Trigger: TCTGGAGACCCAGAAGCCCCAGAAGGTGGACTTCTG...CCCTGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTCAGATCCCTGAGAAGTaGCAGCTGCTTCTCATTTTT | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCQIPEK*QLLLIF Trigger: AAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTG...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR TCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTGATAAGAGGAATAGCTaGAGCTGTTGGTACTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCDKRNS*SCWYCV Trigger: AACGCAGTACCAACAGCTTCAGCTATTCCTCTTATC...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR TCA 90 bp | TCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTAGCTACCTCTGGCTCTaGCTCAGGTGCAGGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SNLLLFAKGPTTVWGRDTSYLWL*LRCRPS Trigger: CGAGGGCCTGCACCTGAGTCAGAGCCAGAGGTAGCT...AGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | GCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCCCTGTGAAATTCACTTaGCCCCAAGCTACAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ALPRDWKQRELGWASYFPPVKFT*PQATAK Trigger: CTTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGG...GGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | TGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGAGGCTAGGTCTGGCTaGGCCACGCCAGAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CFYLLRVQRRFGEGILNSEARSG*ATPEVH Trigger: GTGGACTTCTGGCGTGGCCCAGCCAGACCTAGCCTC...TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCGATTGGACCTCCAGTGCTaGACTTCAGGACAAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: PSQGLEAKRAWMGLIFSRLDLQC*TSGQEW Trigger: CCATTCTTGTCCTGAAGTTCAGCACTGGAGGTCCAA...TCGGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR GCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTATGGTCTTTGCCGTATaGATTGACAATCTTCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCMVFAV*IDNLLR Trigger: TCGCAGAAGATTGTCAATGCATACGGCAAAGACCAT...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCGAATTTCCTCCGAAGCCTaGCTTCCAGTTCCTGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PSQGLEAKRAWMGLIFSRISSEA*LPVPVE Trigger: CTCAACAGGAACTGGAAGGCAGGCTTCGGAGGAAAT...TCGGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | CTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCACAGAAGTCCACCTTCTaGGGCTTCTGGGTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LRVQRRFGEGILNSGGFSQKSTF*GFWVSR Trigger: TCTGGAGACCCAGAAGCCCCAGAAGGTGGACTTCTG...TGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGGGTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTGAACCTTGTTCAGAAGTCCACCTTCTaGGGCTTCTGGGTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: IEGGADAAKNVLDPVNLVQKSTF*GFWVSR Trigger: TCTGGAGACCCAGAAGCCCCAGAAGGTGGACTTCTG...AACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCACCCTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
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| CDS-3UTR CCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTTCATCCAGTAGCACCTaGATGTCCTTTATCATGATG | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCSSSST*MSFIMM Trigger: CATCATGATAAAGGACATCCAGGTGCTACTGGATGA...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR CCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTACTTCAGGACAAGAATaGACCGGTTTTCAAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCTSGQE*TGFQSS Trigger: AGAGCTTTGAAAACCGGTCCATTCTTGTCCTGAAGT...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
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| CDS-3UTR CCA 90 bp | TATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGCAGATGCCGGTGGCATaGGTGATCCACTCTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: YLLRVQRRFGEGILNSGGQMPVA*VIHSLE Trigger: TTCCAGAGAGTGGATCACCCATGCCACCGGCATCTG...CCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | TGCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATGGGTCTCCAGATCCCTaGGAAGTGACAGCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CSNLLLFAKGPTTVWGRDGSPDP*EVTAAS Trigger: AGAAGCAGCTGTCACTTCTCAGGGATCTGGAGACCC...ATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | TGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCGGATGTCCTTTATCATaGTGCTGTAGGCAAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: WPFPGIGSKESLDGPHIFGCPLS*CCRQGH Trigger: ATGGCCTTGCCTACAGCATCATGATAAAGGACATCC...GAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | GCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCGATAAGAGGAATAGCTaGAGCTGTTGGTACTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: ALPRDWKQRELGWASYFPDKRNS*SCWYCV Trigger: AACGCAGTACCAACAGCTTCAGCTATTCCTCTTATC...GGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | GCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATATGCCGGTGGCATGGGTaGTCCACTCTCTGGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: AQICFYLLRVQRRFGEGICRWHG*STLWNE Trigger: TTCATTCCAGAGAGTGGATCACCCATGCCACCGGCA...TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
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| CDS-3UTR TCA 90 bp | GGCAATGTAGATTTTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGCCCTCGGTAAGTCTCTaGGCAGGGGTTTTTGTTAGA | + |
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Preference number: 4 (lower is better) Translates to: GNVDFGPSQGLEAKRAWMPSVSL*AGVFVR Trigger: TCTAACAAAAACCCCTGCTCAGAGACTTACCGAGGG...CATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAAAATCTACATTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | CAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTCCACCGAGATCCCACTaGCTGAATAGAGGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QICFYLLRVQRRFGEGILPPRSH*LNRGWC Trigger: GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGG...AAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CCA 90 bp | TTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGACCACCGAGATCCCACTaGCTGAATAGAGGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FYLLRVQRRFGEGILNSGPPRSH*LNRGWC Trigger: GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGG...TCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| 3UTR CAA 72 bp | CTAGAGGCAGTGAGGCCTGCTCAAATTTGCTTCTATTaGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LEAVRPAQICFY*LRVQRRFGEGI Trigger: TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCAGGCCTCACTGCCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCGACAGATCCCTGAGAAGTaGCAGCTGCTTCTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSQGLEAKRAWMGLIFSRQIPEK*QLLLIF Trigger: AAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTG...TCGGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCAACTGCTCCGGCCTGAGTAGCGTGGCTAATAGGGGTGATTCAGGGTGTAAGCTCTTGCCAATGTaGATTTTGGAGACAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: NPNCSGLSSVANRGDSGCKLLPM*ILETRL Trigger: TAATCTTGTCTCCAAAATTCACATTGGCAAGAGCTT...ACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGAGCAGTTGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115138.8 ENSMUST00000165949.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTTGGACCTCCAGTGCTaGACTTCAGGACAAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRVQRRFGEGILNSGGFLDLQC*TSGQEW Trigger: CCATTCTTGTCCTGAAGTTCAGCACTGGAGGTCCAA...AAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | ATAGAGGGTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTGAACCTTGTTTTGGACCTCCAGTGCTaGACTTCAGGACAAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: IEGGADAAKNVLDPVNLVLDLQC*TSGQEW Trigger: CCATTCTTGTCCTGAAGTTCAGCACTGGAGGTCCAA...AACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCACCCTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCATGCCGGTGGCATGGGTaGTCCACTCTCTGGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFYLLRVQRRFGEGILNSCRWHG*STLWNE Trigger: TTCATTCCAGAGAGTGGATCACCCATGCCACCGGCA...TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCAAGCGGTTCATGCTATaGGTAAAAGCAAAGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: WPFPGIGSKESLDGPHIFKRFML*VKAKPS Trigger: CGATGGCTTTGCTTTTACTCATAGCATGAACCGCTT...GAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCAGGGAATAGAGGGTGGTGCTaGTGCTGCCAAAAATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RVQRRFGEGILNSGGFSGNRGWC*CCQKCT Trigger: AGTACATTTTTGGCAGCATCAGCACCACCCTCTATT...CCCTGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCACCTGTGAAATTCACTTaGCCCCAAGCTACAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVQRRFGEGILNSGGFSPVKFT*PQATAK Trigger: CTTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGG...TGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTGCTGCTTCTCATTTTTaGCCAGGACTCGAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LALPRDWKQRELGWASYFAASHF*PGLEEP Trigger: AGGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGC...AAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | TCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTCAGAAGTCCACCTTCTaGGGCTTCTGGGTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SNLLLFAKGPTTVWGRDTQKSTF*GFWVSR Trigger: TCTGGAGACCCAGAAGCCCCAGAAGGTGGACTTCTG...AGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATATTGGACCTCCAGTGCTaGACTTCAGGACAAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: AQICFYLLRVQRRFGEGILDLQC*TSGQEW Trigger: CCATTCTTGTCCTGAAGTTCAGCACTGGAGGTCCAA...TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGATCCACTCTCTGGAATaGATCCCAGTGTCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRVQRRFGEGILNSGGIHSLE*IPVSIQ Trigger: CTGGATTGACACTGGGATTCATTCCAGAGAGTGGAT...CCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | ATAGAGGGTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTGAACCTTGTTATCCACTCTCTGGAATaGATCCCAGTGTCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IEGGADAAKNVLDPVNLVIHSLE*IPVSIQ Trigger: CTGGATTGACACTGGGATTCATTCCAGAGAGTGGAT...AACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCACCCTCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCAGGGTGTGTTTCATaGTGGTCTGTAATGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRVQRRFGEGILNSGGFSGCVS*WSVMPS Trigger: GGATGGCATTACAGACCATCATGAAACACACCCTGA...AAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGACGAGATCCCACTGGCTaGATCAGCTCTTCGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FYLLRVQRRFGEGILNSGRDPTG*ISSSWL Trigger: TAACCACGAAGAGCTGATTCAGCCAGTGGGATCTCG...TCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115138.8 |
||
| CDS-3UTR GCA 90 bp | TATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGCTGAGAAGTGACAGCTaGTTCTCATTTTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRVQRRFGEGILNSGGLRSDS*FSFLAR Trigger: CCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAG...CCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATAATTTCCTCCGAAGCCTaGCTTCCAGTTCCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQICFYLLRVQRRFGEGIISSEA*LPVPVE Trigger: CTCAACAGGAACTGGAAGGCAGGCTTCGGAGGAAAT...TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCGTTGAGAGCCTTTACTaGATCCTTGGCAAGATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPFPGIGSKESLDGPHIFVESLY*ILGKIE Trigger: TTCAATCTTGCCAAGGATGCAGTAAAGGCTCTCAAC...GAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATCAGATGCCGGTGGCATaGGTGATCCACTCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ICFYLLRVQRRFGEGILNQMPVA*VIHSLE Trigger: TTCCAGAGAGTGGATCACCCATGCCACCGGCATCTG...ATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGCAGATCCCTGAGAAGTaGCAGCTGCTTCTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRVQRRFGEGILNSGGQIPEK*QLLLIF Trigger: AAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTG...CCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | ATAGAGGGTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTGAACCTTGTTCAGATCCCTGAGAAGTaGCAGCTGCTTCTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IEGGADAAKNVLDPVNLVQIPEK*QLLLIF Trigger: AAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTG...AACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCACCCTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
||
| CDS-3UTR TCA 90 bp | TATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGGATAAGAGGAATAGCTaGAGCTGTTGGTACTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLLRVQRRFGEGILNSGGDKRNS*SCWYCV Trigger: AACGCAGTACCAACAGCTTCAGCTATTCCTCTTATC...CCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGAAGCGGTTCATGCTATaGGTAAAAGCAAAGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: YLLRVQRRFGEGILNSGGKRFML*VKAKPS Trigger: CGATGGCTTTGCTTTTACTCATAGCATGAACCGCTT...CCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | ATAGAGGGTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTGAACCTTGTTAAGCGGTTCATGCTATaGGTAAAAGCAAAGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IEGGADAAKNVLDPVNLVKRFML*VKAKPS Trigger: CGATGGCTTTGCTTTTACTCATAGCATGAACCGCTT...AACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCACCCTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCACCCTCGGTAAGTCTCTaGGCAGGGGTTTTTGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFYLLRVQRRFGEGILNSPSVSL*AGVFVR Trigger: TCTAACAAAAACCCCTGCTCAGAGACTTACCGAGGG...TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATGGCCATAAGGATACATaGCCATCTGAGAGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSNLLLFAKGPTTVWGRDGHKDT*PSESSC Trigger: ACAGCTACTCTCAGATGGTCATGTATCCTTATGGCC...ATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATTCAGGGTGTGTTTCATaGTGGTCTGTAATGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSNLLLFAKGPTTVWGRDSGCVS*WSVMPS Trigger: GGATGGCATTACAGACCATCATGAAACACACCCTGA...ATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | GGCAATGTAGATTTTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGATGGTCTTTGCCGTATaGATTGACAATCTTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GNVDFGPSQGLEAKRAWMMVFAV*IDNLLR Trigger: TCGCAGAAGATTGTCAATGCATACGGCAAAGACCAT...CATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAAAATCTACATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAATTTCCTCCGAAGCCTaGCTTCCAGTTCCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FYLLRVQRRFGEGILNSGISSEA*LPVPVE Trigger: CTCAACAGGAACTGGAAGGCAGGCTTCGGAGGAAAT...TCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | TCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTCCTGTGAAATTCACTTaGCCCCAAGCTACAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLLLFAKGPTTVWGRDTPVKFT*PQATAK Trigger: CTTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGG...AGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTTCATCCAGTAGCACCTaGATGTCCTTTATCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LALPRDWKQRELGWASYFSSSST*MSFIMM Trigger: CATCATGATAAAGGACATCCAGGTGCTACTGGATGA...AAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTACTTCAGGACAAGAATaGACCGGTTTTCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LALPRDWKQRELGWASYFTSGQE*TGFQSS Trigger: AGAGCTTTGAAAACCGGTCCATTCTTGTCCTGAAGT...AAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTGGATGTCCTTTATCATaGTGCTGTAGGCAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNLLLFAKGPTTVWGRDTGCPLS*CCRQGH Trigger: ATGGCCTTGCCTACAGCATCATGATAAAGGACATCC...AGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | CAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTGGATGTCCTTTATCATaGTGCTGTAGGCAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QICFYLLRVQRRFGEGILGCPLS*CCRQGH Trigger: ATGGCCTTGCCTACAGCATCATGATAAAGGACATCC...AAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTATCCACTCTCTGGAATaGATCCCAGTGTCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLLLFAKGPTTVWGRDTIHSLE*IPVSIQ Trigger: CTGGATTGACACTGGGATTCATTCCAGAGAGTGGAT...AGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATCCCTCGGTAAGTCTCTaGGCAGGGGTTTTTGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICFYLLRVQRRFGEGILNPSVSL*AGVFVR Trigger: TCTAACAAAAACCCCTGCTCAGAGACTTACCGAGGG...ATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGCCATAAGGATACATaGCCATCTGAGAGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFYLLRVQRRFGEGILNSGHKDT*PSESSC Trigger: ACAGCTACTCTCAGATGGTCATGTATCCTTATGGCC...TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | CAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTGGCCATAAGGATACATaGCCATCTGAGAGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QICFYLLRVQRRFGEGILGHKDT*PSESSC Trigger: ACAGCTACTCTCAGATGGTCATGTATCCTTATGGCC...AAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCAACTTCAGGACAAGAATaGACCGGTTTTCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVQRRFGEGILNSGGFSTSGQE*TGFQSS Trigger: AGAGCTTTGAAAACCGGTCCATTCTTGTCCTGAAGT...TGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | CAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTGATAAGAGGAATAGCTaGAGCTGTTGGTACTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QICFYLLRVQRRFGEGILDKRNS*SCWYCV Trigger: AACGCAGTACCAACAGCTTCAGCTATTCCTCTTATC...AAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATATCCACTCTCTGGAATaGATCCCAGTGTCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICFYLLRVQRRFGEGILNIHSLE*IPVSIQ Trigger: CTGGATTGACACTGGGATTCATTCCAGAGAGTGGAT...ATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATCTGAGAAGTGACAGCTaGTTCTCATTTTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICFYLLRVQRRFGEGILNLRSDS*FSFLAR Trigger: CCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAG...ATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATAATGGTCTTTGCCGTATaGATTGACAATCTTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AQICFYLLRVQRRFGEGIMVFAV*IDNLLR Trigger: TCGCAGAAGATTGTCAATGCATACGGCAAAGACCAT...TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATAACTTCAGGACAAGAATaGACCGGTTTTCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQICFYLLRVQRRFGEGITSGQE*TGFQSS Trigger: AGAGCTTTGAAAACCGGTCCATTCTTGTCCTGAAGT...TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCAAAGCTCTTGCCAATGTaGATTTTGGAGACAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LRVQRRFGEGILNSGGFSKLLPM*ILETRL Trigger: TAATCTTGTCTCCAAAATTCACATTGGCAAGAGCTT...TGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATAAGCGGTTCATGCTATaGGTAAAAGCAAAGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: ICFYLLRVQRRFGEGILNKRFML*VKAKPS Trigger: CGATGGCTTTGCTTTTACTCATAGCATGAACCGCTT...ATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | CAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTATGGTCTTTGCCGTATaGATTGACAATCTTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QICFYLLRVQRRFGEGILMVFAV*IDNLLR Trigger: TCGCAGAAGATTGTCAATGCATACGGCAAAGACCAT...AAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | TTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGTTGAGAGCCTTTACTaGATCCTTGGCAAGATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FYLLRVQRRFGEGILNSGVESLY*ILGKIE Trigger: TTCAATCTTGCCAAGGATGCAGTAAAGGCTCTCAAC...TCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | CAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTTCATCCAGTAGCACCTaGATGTCCTTTATCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: QICFYLLRVQRRFGEGILSSSST*MSFIMM Trigger: CATCATGATAAAGGACATCCAGGTGCTACTGGATGA...AAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCATCATCCAGTAGCACCTaGATGTCCTTTATCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: CFYLLRVQRRFGEGILNSSSSST*MSFIMM Trigger: CATCATGATAAAGGACATCCAGGTGCTACTGGATGA...TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATAAAGCTCTTGCCAATGTaGATTTTGGAGACAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: AQICFYLLRVQRRFGEGIKLLPM*ILETRL Trigger: TAATCTTGTCTCCAAAATTCACATTGGCAAGAGCTT...TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATGGTTTTCAAAGCTCTTaGCAATGTGAATTTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSNLLLFAKGPTTVWGRDGFQSS*QCEFWR Trigger: TCTCCAAAATTCACATTGGCAAGAGCTTTGAAAACC...ATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR TCA 90 bp | TTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAAAGCTCTTGCCAATGTaGATTTTGGAGACAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: FYLLRVQRRFGEGILNSGKLLPM*ILETRL Trigger: TAATCTTGTCTCCAAAATTCACATTGGCAAGAGCTT...TCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR GCA 90 bp | TCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTGGTTTTCAAAGCTCTTaGCAATGTGAATTTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SNLLLFAKGPTTVWGRDTGFQSS*QCEFWR Trigger: TCTCCAAAATTCACATTGGCAAGAGCTTTGAAAACC...AGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS CCA 90 bp | TTCAGAGAAGGGAACTCTCATGTCCACAGGGAGGCTAGGTCTGGCTaGGCCACGCCAGAAGTCCACCTTCTGGGGCTTCTGGGTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FREGNSHVHREARSG*ATPEVHLLGLLGLQ Trigger: CTGGAGACCCAGAAGCCCCAGAAGGTGGACTTCTGGCGTGGCCCAGCCAGACCTAGCCTCCCTGTGGACATGAGAGTTCCCTTCTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS TCA 90 bp | CTTGATGCCGCTGTCATAAGCCCAGTCCACCGAGATCCCACTGGCTaGATCAGCTCTTCGTGGTTAGGTACAGGCTCCAGAGAATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LDAAVISPVHRDPTG*ISSSWLGTGSREWP Trigger: TGGCCATTCTCTGGAGCCTGTACCTAACCACGAAGAGCTGATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCGGCATCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115138.8 |
||
| CDS-3UTR CAA 90 bp | CGCTGTCATAAGCCCAGTCCACCGAGATCCCACTGGCTGAATAGAGGGTGGTGCAGCTGCTTCTCATTTTaGGCCAGGACTCGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RCHKPSPPRSHWLNRGWCSCFSF*ARTRRT Trigger: GGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCT...GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
||
| CDS TCA 90 bp | GAAGTCCACCTTCTGGGGCTTCTGGGTCTCCAGATCCCTGAGAAGTaGCAGCTGCTTCTCATTTTTGGCCAGGACTCGAAGAACCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EVHLLGLLGLQIPEK*QLLLIFGQDSKNLV Trigger: GACCAGGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTGGAGACCCAGAAGCCCCAGAAGGTGGACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS TCA 90 bp | CACGCCAGAAGTCCACCTTCTGGGGCTTCTGGGTCTCCAGATCCCTaGGAAGTGACAGCTGCTTCTCATTTTTGGCCAGGACTCGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HARSPPSGASGSPDP*EVTAASHFWPGLEE Trigger: TTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTGGAGACCCAGAAGCCCCAGAAGGTGGACTTCTGGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS GCA 90 bp | ACCTTCTGGGGCTTCTGGGTCTCCAGATCCCTGAGAAGTGACAGCTaGTTCTCATTTTTGGCCAGGACTCGAAGAACCTGGTCTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFWGFWVSRSLRSDS*FSFLARTRRTWSPV Trigger: CACAGGAGACCAGGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTGGAGACCCAGAAGCCCCAGAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGTCATAAGCCCAGTCCACCGAGATCCCACTGGCTGAATAGAGGGTGGTGCACAGCCAAGATAAAGTaGCAGAACAGAAGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RCHKPSPPRSHWLNRGWCTAKIK*QNRSVR Trigger: ACGGACACTTCTGTTCTGCAACTTTATCTTGGCTGT...GCACCACCCTCTATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
||
| CDS-3UTR CAA 90 bp | ATAGAGGGTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTGAACCTTGTTCCAGCCTGCGAGACTTaGCCATGGCGTCTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IEGGADAAKNVLDPVNLVPACET*PWRLSL Trigger: AAGAGAGAGACGCCATGGCAAAGTCTCGCAGGCTGG...AACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCACCCTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165949.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTTCAGGGAGCTGCTTCTCATTTTaGGCCAGGACTCGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RVQRRFGEGILNSGGFSGSCFSF*ARTRRT Trigger: GGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCT...CCCTGAAAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATCCAGCCTGCGAGACTTaGCCATGGCGTCTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSNLLLFAKGPTTVWGRDPACET*PWRLSL Trigger: AAGAGAGAGACGCCATGGCAAAGTCTCGCAGGCTGG...ATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCATGGAGATCATAGCTTaGAAGTTCCCATGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALPRDWKQRELGWASYFPMEIIA*KFPWPV Trigger: CACTGGCCATGGGAACTTCAAAGCTATGATCTCCAT...GGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS TCA 90 bp | CGATCCAACTATATATCTCGTCCAGGGTGTGATAAGAGGAATAGCTaGAGCTGTTGGTACTGCGTTCCAGCCTGCGAGACTTTGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RSNYISRPGCDKRNS*SCWYCVPACETLPW Trigger: CCATGGCAAAGTCTCGCAGGCTGGAACGCAGTACCAACAGCTTCAGCTATTCCTCTTATCACACCCTGGACGAGATATATAGTTGGATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS-3UTR CAA 90 bp | GGCAATGTAGATTTTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGTCCTGTGAAATTCACTaGGCCCCAAGCTACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GNVDFGPSQGLEAKRAWMSCEIH*APSYSQ Trigger: TTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGGA...CATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAAAATCTACATTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CAA 90 bp | GGCAATGTAGATTTTGGCCCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGAGCTGCTTCTCATTTTaGGCCAGGACTCGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GNVDFGPSQGLEAKRAWMSCFSF*ARTRRT Trigger: GGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCT...CATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGGGCCAAAATCTACATTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS-3UTR CAA 90 bp | TGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCACCAGCCTGCGAGACTTaGCCATGGCGTCTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CFYLLRVQRRFGEGILNSPACET*PWRLSL Trigger: AAGAGAGAGACGCCATGGCAAAGTCTCGCAGGCTGG...TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | TCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTCCAGCCTGCGAGACTTaGCCATGGCGTCTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNLLLFAKGPTTVWGRDTPACET*PWRLSL Trigger: AAGAGAGAGACGCCATGGCAAAGTCTCGCAGGCTGG...AGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCAGGGATTGGAAGCAAAGAGAGCTTGGATGGGCCTCATATTTTCCCGAATGGAGATCATAGCTTaGAAGTTCCCATGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSQGLEAKRAWMGLIFSRMEIIA*KFPWPV Trigger: CACTGGCCATGGGAACTTCAAAGCTATGATCTCCAT...TCGGGAAAATATGAGGCCCATCCAAGCTCTCTTTGCTTCCAATCCCTGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAGGGTTTAGCTGCTTCTCATTTTaGGCCAGGACTCGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: LLRVQRRFGEGILNSGGFSCFSF*ARTRRT Trigger: GGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCT...AAACCCTCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS GCA 90 bp | GTCCATAGTGTTCAATATCCTCTTCAAGACATGGTCTTTGCCGTATaGATTGACAATCTTCTGCGAGATCCAGATGCCGGTGGCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHSVQYPLQDMVFAV*IDNLLRDPDAGGMG Trigger: ACCCATGCCACCGGCATCTGGATCTCGCAGAAGATTGTCAATGCATACGGCAAAGACCATGTCTTGAAGAGGATATTGAACACTATGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS GCA 90 bp | GCCAAAAATGTACTGGATCCCGTGAACCTTGTTGAGAGCCTTTACTaGATCCTTGGCAAGATTGAACAGCTCTTCGTGGTTAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKNVLDPVNLVESLY*ILGKIEQLFVVRYR Trigger: CCTGTACCTAACCACGAAGAGCTGTTCAATCTTGCCAAGGATGCAGTAAAGGCTCTCAACAAGGTTCACGGGATCCAGTACATTTTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATAACAGCCAAGATAAAGTaGCAGAACAGAAGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AQICFYLLRVQRRFGEGITAKIK*QNRSVR Trigger: ACGGACACTTCTGTTCTGCAACTTTATCTTGGCTGT...TATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAATGGAGATCATAGCTTaGAAGTTCCCATGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CFYLLRVQRRFGEGILNSMEIIA*KFPWPV Trigger: CACTGGCCATGGGAACTTCAAAGCTATGATCTCCAT...TGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | CAAATTTGCTTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTACAGCCAAGATAAAGTaGCAGAACAGAAGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QICFYLLRVQRRFGEGILTAKIK*QNRSVR Trigger: ACGGACACTTCTGTTCTGCAACTTTATCTTGGCTGT...AAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAAGCAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS-3UTR CAA 90 bp | TTCTATTTGCTAAGGGTCCAACGACGGTTTGGGGAAGGGATACTTAATTCAGGAACAGCCAAGATAAAGTaGCAGAACAGAAGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: FYLLRVQRRFGEGILNSGTAKIK*QNRSVR Trigger: ACGGACACTTCTGTTCTGCAACTTTATCTTGGCTGT...TCCTGAATTAAGTATCCCTTCCCCAAACCGTCGTTGGACCCTTAGCAAATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 |
||
| CDS CCA 72 bp | TGCCGCTGTCATAAGCCCAGTCCACCGAGATCCCACTaGCTGAATCAGCTCTTCGTGGTTAGGTACAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CRCHKPSPPRSH*LNQLFVVRYRL Trigger: GAGCCTGTACCTAACCACGAAGAGCTGATTCAGCCAGTGGGATCTCGGTGGACTGGGCTTATGACAGCGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115138.8 |
||
| CDS TCA 72 bp | AGTCCACCTTCTGGGGCTTCTGGGTCTCCAGATCCCTaGGAAGTGACAGCTGCTTCTCATTTTTGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPPSGASGSPDP*EVTAASHFWPG Trigger: TCCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTGGAGACCCAGAAGCCCCAGAAGGTGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS GCA 72 bp | GGCTTCTGGGTCTCCAGATCCCTGAGAAGTGACAGCTaGTTCTCATTTTTGGCCAGGACTCGAAGAACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFWVSRSLRSDS*FSFLARTRRTW Trigger: CCAGGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTGGAGACCCAGAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS CAA 90 bp | TCTCCTGTGAAATTCACTTGGCCCCAAGCTACAGCCAAGATAAAGTaGCAGAACAGAAGTGTCCGTCTGTCCAGAGGGGACAGCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPVKFTWPQATAKIK*QNRSVRLSRGDSPG Trigger: CCCTGGGCTGTCCCCTCTGGACAGACGGACACTTCTGTTCTGCAACTTTATCTTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS GCA 72 bp | AAGACATGGTCTTTGCCGTATGCATTGACAATCTTCTaGGAGATCCAGATGCCGGTGGCATGGGTGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KTWSLPYALTIF*EIQMPVAWVIH Trigger: GTGGATCACCCATGCCACCGGCATCTGGATCTCGCAGAAGATTGTCAATGCATACGGCAAAGACCATGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
||
| CDS CAA 90 bp | TTCTGGGTCTCCAGATCCCTGAGAAGTGACAGCTGCTTCTCATTTTaGGCCAGGACTCGAAGAACCTGGTCTCCTGTGAAATTCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: FWVSRSLRSDSCFSF*ARTRRTWSPVKFTW Trigger: CCAAGTGAATTTCACAGGAGACCAGGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTGGAGACCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS TCA 72 bp | GTGGTGCTGATGCTGCCAAAAATGTACTGGATCCCGTaGACCTTGTTGAGAGCCTTTACTGCATCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VVLMLPKMYWIP*TLLRAFTASLA Trigger: TGCCAAGGATGCAGTAAAGGCTCTCAACAAGGTTCACGGGATCCAGTACATTTTTGGCAGCATCAGCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS CCA 72 bp | ATGAATCCCAGTGTCAATCCAGATAGCCGGGCGATTTaGACCTCCAGTGCTGAACTTCAGGACAAGAATGGA | + |
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Preference number: 6 (lower is better) Translates to: MNPSVNPDSRAI*TSSAELQDKNG Trigger: TCCATTCTTGTCCTGAAGTTCAGCACTGGAGGTCCAAATCGCCCGGCTATCTGGATTGACACTGGGATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS CAA 72 bp | AAATTCACTTGGCCCCAAGCTACAGCCAAGATAAAGTaGCAGAACAGAAGTGTCCGTCTGTCCAGAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: KFTWPQATAKIK*QNRSVRLSRGD Trigger: GTCCCCTCTGGACAGACGGACACTTCTGTTCTGCAACTTTATCTTGGCTGTAGCTTGGGGCCAAGTGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS CAA 72 bp | TCCAGATCCCTGAGAAGTGACAGCTGCTTCTCATTTTaGGCCAGGACTCGAAGAACCTGGTCTCCTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SRSLRSDSCFSF*ARTRRTWSPVK Trigger: TTTCACAGGAGACCAGGTTCTTCGAGTCCTGGCCAAAAATGAGAAGCAGCTGTCACTTCTCAGGGATCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS TCA 72 bp | TATATATCTCGTCCAGGGTGTGATAAGAGGAATAGCTaGAGCTGTTGGTACTGCGTTCCAGCCTGCGAGACT | + |
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Preference number: 6 (lower is better) Translates to: YISRPGCDKRNS*SCWYCVPACET Trigger: AGTCTCGCAGGCTGGAACGCAGTACCAACAGCTTCAGCTATTCCTCTTATCACACCCTGGACGAGATATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS GCA 72 bp | GTACTGGATCCCGTGAACCTTGTTGAGAGCCTTTACTaGATCCTTGGCAAGATTGAACAGCTCTTCGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VLDPVNLVESLY*ILGKIEQLFVV Trigger: AACCACGAAGAGCTGTTCAATCTTGCCAAGGATGCAGTAAAGGCTCTCAACAAGGTTCACGGGATCCAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062758.11 ENSMUST00000115139.8 |
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| CDS CCA 72 bp | AGGACTCGAAGAACCTGGTCTCCTGTGAAATTCACTTaGCCCCAAGCTACAGCCAAGATAAAGTTGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RTRRTWSPVKFT*PQATAKIKLQN Trigger: GTTCTGCAACTTTATCTTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGGAGACCAGGTTCTTCGAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS CAA 72 bp | CAGGACTCGAAGAACCTGGTCTCCTGTGAAATTCACTaGGCCCCAAGCTACAGCCAAGATAAAGTTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: QDSKNLVSCEIH*APSYSQDKVAE Trigger: TTCTGCAACTTTATCTTGGCTGTAGCTTGGGGCCAAGTGAATTTCACAGGAGACCAGGTTCTTCGAGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS CAA 90 bp | ATAGTGTTCAATATCCTCTTCAAGACATGGTCTTTGCCGTATGCATaGACAATCTTCTGCGAGATCCAGATGCCGGTGGCATGGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: IVFNILFKTWSLPYA*TIFCEIQMPVAWVI Trigger: GATCACCCATGCCACCGGCATCTGGATCTCGCAGAAGATTGTCAATGCATACGGCAAAGACCATGTCTTGAAGAGGATATTGAACACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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| CDS TCA 72 bp | TCTCTTCATCCAGTAGCACCTGGATGTCCTTTATCATaGTGCTGTAGGCAAGGCCATGAGACTTCAAATAAG | + |
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Preference number: 6 (lower is better) Translates to: SLHPVAPGCPLS*CCRQGHETSNK Trigger: CTTATTTGAAGTCTCATGGCCTTGCCTACAGCATCATGATAAAGGACATCCAGGTGCTACTGGATGAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062758.11 ENSMUST00000115138.8 ENSMUST00000115139.8 ENSMUST00000165949.2 |
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