Pregenerated sensors for CPA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001865Ensembl transcript IDs: ENSMUST00000001921.3
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCTCTTTCTCAGACTCTaGTGCAGGTCCCCTGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNLFLRL*CRSPVD Trigger: GTCTACAGGGGACCTGCACCAGAGTCTGAGAAAGAG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCAGTGCCAATGCAGGTaGAGTTTTGGTTCCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNQCQCR*SFGSWN Trigger: GTTCCAGGAACCAAAACTCCACCTGCATTGGCACTG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCCAAGGTTGACTGGATaGTCTGAGATTCCTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNPRLTG*SEIPSH Trigger: GTGAGAAGGAATCTCAGACCATCCAGTCAACCTTGG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCCACTGACAGAAAGCTaGAGAAATCCATTCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNPLTES*RNPFTC Trigger: GCACGTGAATGGATTTCTCCAGCTTTCTGTCAGTGG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATGTTGACTGGATGGTCTaGGATTCCTTCTCACTAACT | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNVDWMV*DSFSLT Trigger: AGTTAGTGAGAAGGAATCTCAGACCATCCAGTCAAC...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATATCCATTCACGTGCATaGATGCCACAGTCCATAAAG | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNIHSRA*MPQSIK Trigger: CTTTATGGACTGTGGCATTCATGCACGTGAATGGAT...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCCAGTCATTGTATTTTaGATAACTGTGCCTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNPVIVF*ITVPAC Trigger: GCAGGCAGGCACAGTTATGCAAAATACAATGACTGG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATGCGTGCTTTTCATTCTaGAGTTTCACACGGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNACFSF*SFTRNT Trigger: GGTATTCCGTGTGAAACTCCAGAATGAAAAGCACGC...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATATCATGGATAGCATCTaGATACCAGAAGTCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNIMDSI*IPEVEL Trigger: GAGCTCGACTTCTGGTATCCAGATGCTATCCATGAT...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTTCAAGACACTGGCGTaGTTTTCATTCTGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNFKTLA*FSFWSF Trigger: GAAACTCCAGAATGAAAAGCACGCCAGTGTCTTGAA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATAGAAGTCGAGCTCAATaGTTTGGGTCAAGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNRSRAQ*FGSSSS Trigger: TGAAGAACTTGACCCAAAGCATTGAGCTCGACTTCT...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATAGAAATCCATTCACGTaGATGAATGCCACAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNRNPFT*MNATVH Trigger: ATGGACTGTGGCATTCATGCACGTGAATGGATTTCT...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTCCATAACTCTTGGTTaGCTGATAGACAAACCACTG | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNSITLG*LIDKPL Trigger: CAGTGGTTTGTCTATCAGGCAACCAAGAGTTATGGA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTCGAGCTCAATGCTTTaGGTCAAGTTCTTCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNSSSML*VKFFKT Trigger: TGTCTTGAAGAACTTGACCCAAAGCATTGAGCTCGA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATGTAGACATTGAGGCATaGTTTGTTGGTGTTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNVDIEA*FVGVWR Trigger: TCTCCAAACACCAACAAACCATGCCTCAATGTCTAC...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCTTTATCCGGGATTCTaGAAGAAGAAACCCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNLYPGF*KKKPRL Trigger: AAGTCTGGGTTTCTTCTTCCAGAATCCCGGATAAAG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATGGTTTCTTTACATGTTaGCTTTATCCGGGATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNGFFTC*LYPGFW Trigger: CCAGAATCCCGGATAAAGCCAACATGTAAAGAAACC...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTGTATCCGTCTACATTaGATACAGGCAGAACGTAAA | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNCIRLH*IQAERK Trigger: TTTACGTTCTGCCTGTATTCAATGTAGACGGATACA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATGATATAAGCCTTGATTaGGTTCAGATGGCTTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGRDSTQALISTFQNKGNDISLD*VQMASN Trigger: ATTCGAAGCCATCTGAACTCAATCAAGGCTTATATC...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 90 bp | TGGTGCAGGTCCCCTGTAGACATTGAGGCATGGTTTGTTGGTGTTTaGAGAAGAGTCCCACGAGACATCAAAGTTCCTGTTGAGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: WCRSPVDIEAWFVGV*RRVPRDIKVPVEVS Trigger: ACTGACCTCAACAGGAACTTTGATGTCTCGTGGGACTCTTCTCCAAACACCAACAAACCATGCCTCAATGTCTACAGGGGACCTGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 90 bp | CTTTTGTCTCTTTCTCAGACTCTGGTGCAGGTCCCCTGTAGACATTaGGGCATGGTTTGTTGGTGTTTGGAGAAGAGTCCCACGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSLSQTLVQVPCRH*GMVCWCLEKSPTRH Trigger: ATGTCTCGTGGGACTCTTCTCCAAACACCAACAAACCATGCCTCAATGTCTACAGGGGACCTGCACCAGAGTCTGAGAAAGAGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 90 bp | CTCTTTCTCAGACTCTGGTGCAGGTCCCCTGTAGACATTGAGGCATaGTTTGTTGGTGTTTGGAGAAGAGTCCCACGAGACATCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: LFLRLWCRSPVDIEA*FVGVWRRVPRDIKV Trigger: AACTTTGATGTCTCGTGGGACTCTTCTCCAAACACCAACAAACCATGCCTCAATGTCTACAGGGGACCTGCACCAGAGTCTGAGAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 90 bp | GCTTCGAATGAAGTTGGTGACAGCTTTTGTCTCTTTCTCAGACTCTaGTGCAGGTCCCCTGTAGACATTGAGGCATGGTTTGTTGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: ASNEVGDSFCLFLRL*CRSPVDIEAWFVGV Trigger: AACACCAACAAACCATGCCTCAATGTCTACAGGGGACCTGCACCAGAGTCTGAGAAAGAGACAAAAGCTGTCACCAACTTCATTCGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCCCAGTCATTGTATTTaGCATAACTGTGCCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNPSHCI*HNCACL Trigger: CAGGCAGGCACAGTTATGCAAAATACAATGACTGGG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTTGAGGCATGGTTTGTaGGTGTTTGGAGAAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNLRHGL*VFGEES Trigger: GGACTCTTCTCCAAACACCAACAAACCATGCCTCAA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATCATCCGTGGCAATCCTaGCAACTTTCAATAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNHPWQS*QLSIGP Trigger: AGGACCTATTGAAAGTTGCAAGGATTGCCACGGATG...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS GCA 90 bp | AAGTCGAGCTCAATGCTTTGGGTCAAGTTCTTCAAGACACTGGCGTaGTTTTCATTCTGGAGTTTCACACGGAATACCTTCTCCCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: KSSSMLWVKFFKTLA*FSFWSFTRNTFSLS Trigger: TGACAGGGAGAAGGTATTCCGTGTGAAACTCCAGAATGAAAAGCACGCCAGTGTCTTGAAGAACTTGACCCAAAGCATTGAGCTCGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 90 bp | ATGCTTTGGGTCAAGTTCTTCAAGACACTGGCGTGCTTTTCATTCTaGAGTTTCACACGGAATACCTTCTCCCTGTCAAAGTGGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: MLWVKFFKTLACFSF*SFTRNTFSLSKWTG Trigger: TCCTGTCCACTTTGACAGGGAGAAGGTATTCCGTGTGAAACTCCAGAATGAAAAGCACGCCAGTGTCTTGAAGAACTTGACCCAAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATAATGCAGGTGGAGTTTaGGTTCCTGGAACGGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNNAGGV*VPGTVF Trigger: AAAAACCGTTCCAGGAACCAAAACTCCACCTGCATT...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATACATTGAGGCATGGTTaGTTGGTGTTTGGAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNTLRHG*LVFGEE Trigger: CTCTTCTCCAAACACCAACAAACCATGCCTCAATGT...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTGGCTTCGAATGAAGTaGGTGACAGCTTTTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNWLRMK*VTAFVS Trigger: AGAGACAAAAGCTGTCACCAACTTCATTCGAAGCCA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTATGTTGTTCCAAGGTaGACTGGATGGTCTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNYVVPR*TGWSEI Trigger: AATCTCAGACCATCCAGTCAACCTTGGAACAACATA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGAGACTCCACCCAAGCATTGATTAGCACGTTTCAAAACAAGGGCAATTGGTTTCTTTACATGTaGGCTTTATCCGGGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: PGRDSTQALISTFQNKGNWFLYM*ALSGIL Trigger: CAGAATCCCGGATAAAGCCAACATGTAAAGAAACCA...ATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTCTCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS GCA 90 bp | TTTCACACGGAATACCTTCTCCCTGTCAAAGTGGACAGGAGCAATTaGAAGTGTAGTGTAGATGACAGCCATAAGCAAGAAGAACCTCAT | + |
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Preference number: 5 (lower is better) Translates to: FHTEYLLPVKVDRSN*KCSVDDSHKQEEPH Trigger: ATGAGGTTCTTCTTGCTTATGGCTGTCATCTACACTACACTTGCAATTGCTCCTGTCCACTTTGACAGGGAGAAGGTATTCCGTGTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 90 bp | ATATCATGGATAGCATCTGGATACCAGAAGTCGAGCTCAATGCTTTaGGTCAAGTTCTTCAAGACACTGGCGTGCTTTTCATTCTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: ISWIASGYQKSSSML*VKFFKTLACFSFWS Trigger: ACTCCAGAATGAAAAGCACGCCAGTGTCTTGAAGAACTTGACCCAAAGCATTGAGCTCGACTTCTGGTATCCAGATGCTATCCATGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 90 bp | TCCACATTCGATCCTGTGTCCATGACCAAATGTATCCGTCTACATTaGATACAGGCAGAACGTAAAAATTCATCCGGTCCAAGAGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: STFDPVSMTKCIRLH*IQAERKNSSGPRVW Trigger: CCAAACTCTTGGACCGGATGAATTTTTACGTTCTGCCTGTATTCAATGTAGACGGATACATTTGGTCATGGACACAGGATCGAATGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 90 bp | TCGGAAATCCACAGTCATATTCACAGCAATATCATGGATAGCATCTaGATACCAGAAGTCGAGCTCAATGCTTTGGGTCAAGTTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SEIHSHIHSNIMDSI*IPEVELNALGQVLQ Trigger: TTGAAGAACTTGACCCAAAGCATTGAGCTCGACTTCTGGTATCCAGATGCTATCCATGATATTGCTGTGAATATGACTGTGGATTTCCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS GCA 90 bp | AACAATCTTGTCCCAGTCATTGTATTTTGCATAACTGTGCCTGCCTaGGATTTCATCTTTCACATCAAACTGTTTCTCTATCTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NNLVPVIVFCITVPA*DFIFHIKLFLYLFL Trigger: CAAGAAGAGATAGAGAAACAGTTTGATGTGAAAGATGAAATCGCAGGCAGGCACAGTTATGCAAAATACAATGACTGGGACAAGATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS GCA 90 bp | AAGAAACAATCTTGTCCCAGTCATTGTATTTTGCATAACTGTGCCTaGCTGCGATTTCATCTTTCACATCAAACTGTTTCTCTATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: KKQSCPSHCILHNCA*LRFHLSHQTVSLSL Trigger: AAGAGATAGAGAAACAGTTTGATGTGAAAGATGAAATCGCAGGCAGGCACAGTTATGCAAAATACAATGACTGGGACAAGATTGTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 90 bp | ATACTTGGCAATAAATTTGACAGAAAGCATGGTTTCTTTACATGTTaGCTTTATCCGGGATTCTGGAAGAAGAAACCCAGACTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ILGNKFDRKHGFFTC*LYPGFWKKKPRLSF Trigger: AAAGGAAAGTCTGGGTTTCTTCTTCCAGAATCCCGGATAAAGCCAACATGTAAAGAAACCATGCTTTCTGTCAAATTTATTGCCAAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 72 bp | AGACTCTGGTGCAGGTCCCCTGTAGACATTGAGGCATaGTTTGTTGGTGTTTGGAGAAGAGTCCCACGAGAC | + |
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Preference number: 6 (lower is better) Translates to: RLWCRSPVDIEA*FVGVWRRVPRD Trigger: GTCTCGTGGGACTCTTCTCCAAACACCAACAAACCATGCCTCAATGTCTACAGGGGACCTGCACCAGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 72 bp | CTTTCTCAGACTCTGGTGCAGGTCCCCTGTAGACATTaGGGCATGGTTTGTTGGTGTTTGGAGAAGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSQTLVQVPCRH*GMVCWCLEKSP Trigger: GGGACTCTTCTCCAAACACCAACAAACCATGCCTCAATGTCTACAGGGGACCTGCACCAGAGTCTGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 72 bp | TCCCCTGTAGACATTGAGGCATGGTTTGTTGGTGTTTaGAGAAGAGTCCCACGAGACATCAAAGTTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SPVDIEAWFVGV*RRVPRDIKVPV Trigger: AACAGGAACTTTGATGTCTCGTGGGACTCTTCTCCAAACACCAACAAACCATGCCTCAATGTCTACAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CAA 72 bp | GATAGCATCTGGATACCAGAAGTCGAGCTCAATGCTTaGGGTCAAGTTCTTCAAGACACTGGCGTGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: DSIWIPEVELNA*GQVLQDTGVLF Trigger: GAAAAGCACGCCAGTGTCTTGAAGAACTTGACCCAAAGCATTGAGCTCGACTTCTGGTATCCAGATGCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 72 bp | GTCAAGTTCTTCAAGACACTGGCGTGCTTTTCATTCTaGAGTTTCACACGGAATACCTTCTCCCTGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VKFFKTLACFSF*SFTRNTFSLSK Trigger: CTTTGACAGGGAGAAGGTATTCCGTGTGAAACTCCAGAATGAAAAGCACGCCAGTGTCTTGAAGAACTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 72 bp | ATAGCATCTGGATACCAGAAGTCGAGCTCAATGCTTTaGGTCAAGTTCTTCAAGACACTGGCGTGCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: IASGYQKSSSML*VKFFKTLACFS Trigger: TGAAAAGCACGCCAGTGTCTTGAAGAACTTGACCCAAAGCATTGAGCTCGACTTCTGGTATCCAGATGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CAA 90 bp | AATATCATGGATAGCATCTGGATACCAGAAGTCGAGCTCAATGCTTaGGGTCAAGTTCTTCAAGACACTGGCGTGCTTTTCATTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: NIMDSIWIPEVELNA*GQVLQDTGVLFILE Trigger: CTCCAGAATGAAAAGCACGCCAGTGTCTTGAAGAACTTGACCCAAAGCATTGAGCTCGACTTCTGGTATCCAGATGCTATCCATGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 72 bp | CTGCGAGTAGGAATGGAAAGTGATATAAGCCTTGATTaGGTTCAGATGGCTTCGAATGAAGTTGGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: LRVGMESDISLD*VQMASNEVGDS Trigger: GCTGTCACCAACTTCATTCGAAGCCATCTGAACTCAATCAAGGCTTATATCACTTTCCATTCCTACTCGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 72 bp | TATTGGGCCGTAGATGTAACGGGTTTCATATCTAGTTaGGAGAGCATCCGTGGCAATCCTTGCAACTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: YWAVDVTGFISS*ESIRGNPCNFQ Trigger: TTGAAAGTTGCAAGGATTGCCACGGATGCTCTCTCAACTAGATATGAAACCCGTTACATCTACGGCCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 72 bp | TTCCTTTATCACGAAGCTCAAAGGCAAATGTGTGTTTaGTGCCCAGGTCATAAACCCAGTCTAAGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: FLYHEAQRQMCV*CPGHKPSLRKS Trigger: GCTCTTCCTTAGACTGGGTTTATGACCTGGGCATCAAACACACATTTGCCTTTGAGCTTCGTGATAAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS GCA 72 bp | TCAATGCTTTGGGTCAAGTTCTTCAAGACACTGGCGTaGTTTTCATTCTGGAGTTTCACACGGAATACCTTC | + |
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Preference number: 6 (lower is better) Translates to: SMLWVKFFKTLA*FSFWSFTRNTF Trigger: GAAGGTATTCCGTGTGAAACTCCAGAATGAAAAGCACGCCAGTGTCTTGAAGAACTTGACCCAAAGCATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 72 bp | TGGATTTTATGTTGTTCCAAGGTTGACTGGATGGTCTaGGATTCCTTCTCACTAACTCGGAAATCCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: WILCCSKVDWMV*DSFSLTRKSTV Trigger: GACTGTGGATTTCCGAGTTAGTGAGAAGGAATCTCAGACCATCCAGTCAACCTTGGAACAACATAAAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS TCA 72 bp | GATCCTGTGTCCATGACCAAATGTATCCGTCTACATTaGATACAGGCAGAACGTAAAAATTCATCCGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DPVSMTKCIRLH*IQAERKNSSGP Trigger: TGGACCGGATGAATTTTTACGTTCTGCCTGTATTCAATGTAGACGGATACATTTGGTCATGGACACAGGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 72 bp | CACAGTCATATTCACAGCAATATCATGGATAGCATCTaGATACCAGAAGTCGAGCTCAATGCTTTGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: HSHIHSNIMDSI*IPEVELNALGQ Trigger: TTGACCCAAAGCATTGAGCTCGACTTCTGGTATCCAGATGCTATCCATGATATTGCTGTGAATATGACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS GCA 72 bp | AGTCCAAGAAACAATCTTGTCCCAGTCATTGTATTTTaGATAACTGTGCCTGCCTGCGATTTCATCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SPRNNLVPVIVF*ITVPACDFIFH Trigger: GTGAAAGATGAAATCGCAGGCAGGCACAGTTATGCAAAATACAATGACTGGGACAAGATTGTTTCTTGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS GCA 72 bp | TCTTGTCCCAGTCATTGTATTTTGCATAACTGTGCCTaGCTGCGATTTCATCTTTCACATCAAACTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SCPSHCILHNCA*LRFHLSHQTVS Trigger: AGAAACAGTTTGATGTGAAAGATGAAATCGCAGGCAGGCACAGTTATGCAAAATACAATGACTGGGACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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| CDS CCA 72 bp | AATAAATTTGACAGAAAGCATGGTTTCTTTACATGTTaGCTTTATCCGGGATTCTGGAAGAAGAAACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: NKFDRKHGFFTC*LYPGFWKKKPR Trigger: TCTGGGTTTCTTCTTCCAGAATCCCGGATAAAGCCAACATGTAAAGAAACCATGCTTTCTGTCAAATTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001921.3 |
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