Pregenerated sensors for COX8B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025488

Ensembl transcript IDs: ENSMUST00000026561.10

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CAACGACTATGGCTGAGATCCCCACAGCCTGCTCCACGGCGGAAGTaGGAGTTTTGGCTGGCTTGGCAGAGACATGGGCTTTGGGAACCA	+
Preference number: 5 (lower is better) Translates to: QRLWLRSPQPAPRRK*EFWLAWQRHGLWEP Trigger: TGGTTCCCAAAGCCCATGTCTCTGCCAAGCCAGCCAAAACTCCCACTTCCGCCGTGGAGCAGGCTGTGGGGATCTCAGCCATAGTCGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026561.10
CDS TCA 90 bp	TTTTATAGCTCTCCAAGTGGGCTAAGACCCATCCTGCTGGAACCATaGAGCCAACGACTATGGCTGAGATCCCCACAGCCTGCTCCACGG	+
Preference number: 5 (lower is better) Translates to: FYSSPSGLRPILLEP*SQRLWLRSPQPAPR Trigger: CCGTGGAGCAGGCTGTGGGGATCTCAGCCATAGTCGTTGGCTTCATGGTTCCAGCAGGATGGGTCTTAGCCCACTTGGAGAGCTATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026561.10
CDS CAA 72 bp	ATCCCCACAGCCTGCTCCACGGCGGAAGTGGGAGTTTaGGCTGGCTTGGCAGAGACATGGGCTTTGGGAACC	+
Preference number: 6 (lower is better) Translates to: IPTACSTAEVGV*AGLAETWALGT Trigger: GGTTCCCAAAGCCCATGTCTCTGCCAAGCCAGCCAAAACTCCCACTTCCGCCGTGGAGCAGGCTGTGGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026561.10
CDS CAA 90 bp	ATCCCCACAGCCTGCTCCACGGCGGAAGTGGGAGTTTTGGCTGGCTaGGCAGAGACATGGGCTTTGGGAACCACTGTGAACTTCGCAGGC	+
Preference number: 6 (lower is better) Translates to: IPTACSTAEVGVLAG*AETWALGTTVNFAG Trigger: GCCTGCGAAGTTCACAGTGGTTCCCAAAGCCCATGTCTCTGCCAAGCCAGCCAAAACTCCCACTTCCGCCGTGGAGCAGGCTGTGGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026561.10
CDS CAA 90 bp	ATGGCTGAGATCCCCACAGCCTGCTCCACGGCGGAAGTGGGAGTTTaGGCTGGCTTGGCAGAGACATGGGCTTTGGGAACCACTGTGAAC	+
Preference number: 6 (lower is better) Translates to: MAEIPTACSTAEVGV*AGLAETWALGTTVN Trigger: GTTCACAGTGGTTCCCAAAGCCCATGTCTCTGCCAAGCCAGCCAAAACTCCCACTTCCGCCGTGGAGCAGGCTGTGGGGATCTCAGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026561.10
CDS TCA 72 bp	TCTCCAAGTGGGCTAAGACCCATCCTGCTGGAACCATaGAGCCAACGACTATGGCTGAGATCCCCACAGCCT	+
Preference number: 6 (lower is better) Translates to: SPSGLRPILLEP*SQRLWLRSPQP Trigger: AGGCTGTGGGGATCTCAGCCATAGTCGTTGGCTTCATGGTTCCAGCAGGATGGGTCTTAGCCCACTTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026561.10

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