Pregenerated sensors for COX15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040018Ensembl transcript IDs: ENSMUST00000045562.6
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGAGCTACCGCACAGTTTGAAGGGGGTCCTGGTGAGTCCAGCCTaGTTTCGGCTCTGCCCCTTTACTCAAGCCCGCCTCTGCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SELPHSLKGVLVSPA*FRLCPFTQARLCQQ Trigger: CTGCTGGCAGAGGCGGGCTTGAGTAAAGGGGCAGAGCCGAAATCAGGCTGGACTCACCAGGACCCCCTTCAAACTGTGCGGTAGCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR GCA 90 bp | CTGAAGAGTGCGGATTTGGAGTTGGGAAGCAGAGGGTGTGCAAGCTaGCCTGGTCCCCTTCTTGGAAGGCTCCTGTCTAGCGGAGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LKSADLELGSRGCAS*PGPLLGRLLSSGVS Trigger: AGAAACTCCGCTAGACAGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAACTCCAAATCCGCACTCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 90 bp | AAACCGGTTCCGAGTGGTCTCTGGCTGGACCCTCCAGCCCTGTGCTaGTTGCTTCTAACTGAAGAGTGCGGATTTGGAGTTGGGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KPVPSGLWLDPPALC*LLLTEECGFGVGKQ Trigger: CTGCTTCCCAACTCCAAATCCGCACTCTTCAGTTAGAAGCAATCAGCACAGGGCTGGAGGGTCCAGCCAGAGACCACTCGGAACCGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 90 bp | TGGGTGGCTCTGTCCTTGACCTTCACCCTCCTCCTAACTTGGATGTaGTCGAACTGGAAAAGCTGTTGTACCCTGCGTGGGTTCCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: WVALSLTFTLLLTWM*SNWKSCCTLRGFLS Trigger: GGACAGGAACCCACGCAGGGTACAACAGCTTTTCCAGTTCGATCACATCCAAGTTAGGAGGAGGGTGAAGGTCAAGGACAGAGCCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 90 bp | TGTACGTTGCAGCAGGCATGTGACGCAGAGTGGATGCTTAGCTCATaGCCAGGATGCAAGAAAGGATGGAGTTGGGAGTCTCACTCATCC | + |
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Preference number: 1 (lower is better) Translates to: CTLQQACDAEWMLSS*PGCKKGWSWESHSS Trigger: GGATGAGTGAGACTCCCAACTCCATCCTTTCTTGCATCCTGGTCATGAGCTAAGCATCCACTCTGCGTCACATGCCTGCTGCAACGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CCA 90 bp | CCTAACTTGGATGTGATCGAACTGGAAAAGCTGTTGTACCCTGCGTaGGTTCCTGTCCATTCCAGGCTTTCTGTTTTGGTGGGAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: PNLDVIELEKLLYPA*VPVHSRLSVLVGGL Trigger: CAAGCCTCCCACCAAAACAGAAAGCCTGGAATGGACAGGAACCCACGCAGGGTACAACAGCTTTTCCAGTTCGATCACATCCAAGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CCA 90 bp | TTAAAATCACCTTTAAGTCCAGCTCCAGGGACCCAGCACCTTCCCTaGCCTCCATGGGCACCCGTACACACATGGCATATATTAACACAA | + |
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Preference number: 1 (lower is better) Translates to: LKSPLSPAPGTQHLP*PPWAPVHTWHILTQ Trigger: TTGTGTTAATATATGCCATGTGTGTACGGGTGCCCATGGAGGCCAGGGAAGGTGCTGGGTCCCTGGAGCTGGACTTAAAGGTGATTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CCA 90 bp | CATCTCAGAACAGTTCTGAATGACTTGACCAATTTGGAAACCATGTaGCATGTCAATACCACCGTCTTAGAAAAGGCTAAGTTCTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: HLRTVLNDLTNLETM*HVNTTVLEKAKFLC Trigger: ACACAAGAACTTAGCCTTTTCTAAGACGGTGGTATTGACATGCCACATGGTTTCCAAATTGGTCAAGTCATTCAGAACTGTTCTGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCCGAGTGGTCTCTGGCTaGACCCTCCAGCCCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SRALQPVRFLFKFSFHAVRVVSG*TLQPCA Trigger: AGCACAGGGCTGGAGGGTCCAGCCAGAGACCACTCG...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR TCA 90 bp | AGCGATTCGGAGGGAATGGGAACAAGCTGGCAGAACTTCAACCCAGCCCAGTCCGCAGGGCCTGGGACTTaGGGAGTGAAACACATGTGC | + |
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Preference number: 2 (lower is better) Translates to: SDSEGMGTSWQNFNPAQSAGPGT*GVKHMC Trigger: GCACATGTGTTTCACTCCTCAAGTCCCAGGCCCTGC...GGACTGGGCTGGGTTGAAGTTCTGCCAGCTTGTTCCCATTCCCTCCGAATCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCGCAAACCTGAGCCAGTaGGACAGCTCAGCGGTACAA | + |
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Preference number: 2 (lower is better) Translates to: SRALQPVRFLFKFSFHAVANLSQ*DSSAVQ Trigger: TTGTACCGCTGAGCTGTCTCACTGGCTCAGGTTTGC...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR TCA 90 bp | ACCATGCCTGCATGTCAGACAAGCTTGAAGATGTGTCTATTCCTGAGCCTCTCCTTCAGGCAGTCTCACTaGCCCTGCCGCAGGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: TMPACQTSLKMCLFLSLSFRQSH*PCRRKP Trigger: TGGTTTCCTGCGGCAGGGTCAGTGAGACTGCCTGAA...GGAGAGGCTCAGGAATAGACACATCTTCAAGCTTGTCTGACATGCAGGCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR GCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCAGGGAACCTCTTTTGTaGAATAACACAAGCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SRALQPVRFLFKFSFHAVREPLL*NNTSPA Trigger: TGCTGGGCTTGTGTTATTGCACAAAAGAGGTTCCCT...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTGCACCCGTACACACATaGCATATATTAACACAAACA | + |
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Preference number: 2 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPAPVHT*HILTQT Trigger: TGTTTGTGTTAATATATGCCATGTGTGTACGGGTGC...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTACCCAGCACCTTCCCTaGCCTCCATGGGCACCCGTA | + |
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Preference number: 2 (lower is better) Translates to: SRLSVLVGGLLRFYFKPATQHLP*PPWAPV Trigger: TACGGGTGCCCATGGAGGCCAGGGAAGGTGCTGGGT...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CAA 90 bp | GCAATCGCCACACAAAGACAGAAGGAGAGAACCAACTCGCAGGAGTaGTCCCCTTTTCTCTGCATGCACGTGCATGTACAATGCATATCC | + |
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Preference number: 2 (lower is better) Translates to: AIATQRQKERTNSQE*SPFLCMHVHVQCIS Trigger: GGATATGCATTGTACATGCACGTGCATGCAGAGAAAAGGGGACAACTCCTGCGAGTTGGTTCTCTCCTTCTGTCTTTGTGTGGCGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CAA 90 bp | CTTCACCCTCCTCCTAACTTGGATGTGATCGAACTGGAAAAGCTGTaGTACCCTGCGTGGGTTCCTGTCCATTCCAGGCTTTCTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LHPPPNLDVIELEKL*YPAWVPVHSRLSVL Trigger: CAAAACAGAAAGCCTGGAATGGACAGGAACCCACGCAGGGTACAACAGCTTTTCCAGTTCGATCACATCCAAGTTAGGAGGAGGGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | ACCATGCCTGCATGTCAGACAAGCTTGAAGATGTGTCTATTCCTGAGCCTCTCCAAGAAAGGATGGAGTTaGGAGTCTCACTCATCCTCC | + |
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Preference number: 2 (lower is better) Translates to: TMPACQTSLKMCLFLSLSKKGWS*ESHSSS Trigger: GGAGGATGAGTGAGACTCCCAACTCCATCCTTTCTT...GGAGAGGCTCAGGAATAGACACATCTTCAAGCTTGTCTGACATGCAGGCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CAA 90 bp | CTGTTGTACCCTGCGTGGGTTCCTGTCCATTCCAGGCTTTCTGTTTaGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LLYPAWVPVHSRLSV*VGGLLRFYFKPALS Trigger: AGACAAAGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGAATGGACAGGAACCCACGCAGGGTACAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACGTGTGCAAGCTGCCCTaGTCCCCTTCTTGGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LFVNTIIRRTEENHTPADVCKLP*SPSWKA Trigger: AGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACAC...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACCACCATTCCCAACGATaGCACCATGAGGACCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LFVNTIIRRTEENHTPADHHSQR*HHEDQA Trigger: GGCTTGGTCCTCATGGTGGCATCGTTGGGAATGGTG...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACAAGCCCAGCAGGGCCTaGGACTTGAGGAGTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: LFVNTIIRRTEENHTPADKPSRA*DLRSET Trigger: TGTTTCACTCCTCAAGTCCCAGGCCCTGCTGGGCTT...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTATGTTCGTGGTCCAGTaGCCATCTCAGAACAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SRLSVLVGGLLRFYFKPAMFVVQ*PSQNSS Trigger: AGAACTGTTCTGAGATGGGCACTGGACCACGAACAT...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACGTGCAGCGTCTTATGTaGCTCTGTGTGGCATATGCC | + |
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Preference number: 2 (lower is better) Translates to: LFVNTIIRRTEENHTPADVQRLM*LCVAYA Trigger: GGCATATGCCACACAGAGCCACATAAGACGCTGCAC...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTCTGATTGCTTCTAACTaGAGAGTGCGGATTTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SRLSVLVGGLLRFYFKPALIASN*RVRIWS Trigger: ACTCCAAATCCGCACTCTTCAGTTAGAAGCAATCAG...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTATCAGAGCTGGTCTTTaGAACCAACTTCACTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SRLSVLVGGLLRFYFKPAIRAGL*NQLHFR Trigger: CCTGAAGTGAAGTTGGTTGCAAAGACCAGCTCTGAT...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACGGATGCAAGAAAGGATaGAGTTGGGAGTCTCACTCA | + |
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Preference number: 2 (lower is better) Translates to: LFVNTIIRRTEENHTPADGCKKG*SWESHS Trigger: TGAGTGAGACTCCCAACTCCATCCTTTCTTGCATCC...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CAA 90 bp | AAGGGTTTCATATTTCCCCTTGGCCTAGTAGTTCATTATTTTTGTTaGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAG | + |
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Preference number: 2 (lower is better) Translates to: KGFIFPLGLVVHYFC*LILSLEGQRRTTHQ Trigger: CTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAAAAATAATGAACTACTAGGCCAAGGGGAAATATGAAACCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CAA 90 bp | TTTGAAGGGTTTCATATTTCCCCTTGGCCTAGTAGTTCATTATTTTaGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACA | + |
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Preference number: 2 (lower is better) Translates to: FEGFHISPWPSSSLF*FVNTIIRRTEENHT Trigger: TGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAAAAATAATGAACTACTAGGCCAAGGGGAAATATGAAACCCTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CAA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCCTGAAGAGTGCGGATTaGGAGTTGGGAAGCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: SRALQPVRFLFKFSFHAVLKSAD*ELGSRG Trigger: CCCTCTGCTTCCCAACTCCAAATCCGCACTCTTCAG...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR GCA 72 bp | GAAGAGTGCGGATTTGGAGTTGGGAAGCAGAGGGTGTaGAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: EECGFGVGKQRV*KLPWSPSWKAP Trigger: AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAACTCCAAATCCGCACTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR GCA 72 bp | GAAGCTTGGCCACGAGGGTCCCACCATTCCCAACGATaGCACCATGAGGACCAAGCCTTTAACAGATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: EAWPRGSHHSQR*HHEDQAFNRWP Trigger: GGGCCATCTGTTAAAGGCTTGGTCCTCATGGTGGCATCGTTGGGAATGGTGGGACCCTCGTGGCCAAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CCA 72 bp | CCTTTAAGTCCAGCTCCAGGGACCCAGCACCTTCCCTaGCCTCCATGGGCACCCGTACACACATGGCATATA | + |
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Preference number: 3 (lower is better) Translates to: PLSPAPGTQHLP*PPWAPVHTWHI Trigger: TATATGCCATGTGTGTACGGGTGCCCATGGAGGCCAGGGAAGGTGCTGGGTCCCTGGAGCTGGACTTAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 72 bp | CCGAGTGGTCTCTGGCTGGACCCTCCAGCCCTGTGCTaGTTGCTTCTAACTGAAGAGTGCGGATTTGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: PSGLWLDPPALC*LLLTEECGFGV Trigger: AACTCCAAATCCGCACTCTTCAGTTAGAAGCAATCAGCACAGGGCTGGAGGGTCCAGCCAGAGACCACTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 72 bp | TCAGTAGTCAAGTGTCCCTCTGCTCTGAGCCCGCAGTaGAGTGTACGTTGCAGCAGGCATGTGACGCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SVVKCPSALSPQ*SVRCSRHVTQS Trigger: ACTCTGCGTCACATGCCTGCTGCAACGTACACTTCACTGCGGGCTCAGAGCAGAGGGACACTTGACTACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CAA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTGCTAAGTTCTTGTGTTaGGTGATGAGTTTCCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPAKFLC*VMSFQG Trigger: GCCTTGGAAACTCATCACCAAACACAAGAACTTAGC...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CAA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTTTGAGGGAACCTCTTTaGTGCAATAACACAAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPLREPL*CNNTSP Trigger: TGGGCTTGTGTTATTGCACAAAAGAGGTTCCCTCAA...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR GCA 72 bp | GCCCTGCTTCCGGTGGCTGAGGCGGCTCTTTTTACATaGTTTACGTTAAGAATTTTGTCAGCCAGGCGGTGG | + |
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Preference number: 3 (lower is better) Translates to: ALLPVAEAALFT*FTLRILSARRW Trigger: CCACCGCCTGGCTGACAAAATTCTTAACGTAAAGCATGTAAAAAGAGCCGCCTCAGCCACCGGAAGCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR GCA 72 bp | GCTGTAGATGGTCAACTCAGTAGTCAAGTGTCCCTCTaGTCTGAGCCCGCAGTGAAGTGTACGTTGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AVDGQLSSQVSL*SEPAVKCTLQQ Trigger: CTGCTGCAACGTACACTTCACTGCGGGCTCAGAGCAGAGGGACACTTGACTACTGAGTTGACCATCTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CAA 90 bp | AGCGATTCGGAGGGAATGGGAACAAGCTGGCAGAACTTCAACCCAGCCCAGTCCAGTCTTGTTCTGAGGTaGAGGGAACCTCTTTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: SDSEGMGTSWQNFNPAQSSLVLR*REPLLC Trigger: GCACAAAAGAGGTTCCCTCAACCTCAGAACAAGACT...GGACTGGGCTGGGTTGAAGTTCTGCCAGCTTGTTCCCATTCCCTCCGAATCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 72 bp | CCTTTAACAGATGGCCCTTGGAGGACATTCTCAATCTaGGCTACCGCACAGTTTGAAGGGGGTCCTGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PLTDGPWRTFSI*ATAQFEGGPGE Trigger: CTCACCAGGACCCCCTTCAAACTGTGCGGTAGCTCAGATTGAGAATGTCCTCCAAGGGCCATCTGTTAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CAA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCAATGACTTGACCAATTaGGAAACCATGTGGCATGTC | + |
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Preference number: 3 (lower is better) Translates to: SRALQPVRFLFKFSFHAVNDLTN*ETMWHV Trigger: GACATGCCACATGGTTTCCAAATTGGTCAAGTCATT...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CAA 90 bp | ACCATGCCTGCATGTCAGACAAGCTTGAAGATGTGTCTATTCCTGAGCCTCTCCAGCAGGGCCTGGGACTaGAGGAGTGAAACACATGTG | + |
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Preference number: 3 (lower is better) Translates to: TMPACQTSLKMCLFLSLSSRAWD*RSETHV Trigger: CACATGTGTTTCACTCCTCAAGTCCCAGGCCCTGCT...GGAGAGGCTCAGGAATAGACACATCTTCAAGCTTGTCTGACATGCAGGCATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR-3UTR CAA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCACAGTTCTGAATGACTaGACCAATTTGGAAACCATG | + |
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Preference number: 3 (lower is better) Translates to: SRALQPVRFLFKFSFHAVTVLND*TNLETM Trigger: CATGGTTTCCAAATTGGTCAAGTCATTCAGAACTGT...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 72 bp | AACTTCAACCCAGCCCAGTCCTGTTCAGAGGCCTTGTaGTCGCTTAGGTCTAGGATGAGTCTTGTTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: NFNPAQSCSEAL*SLRSRMSLVLR Trigger: CCTCAGAACAAGACTCATCCTAGACCTAAGCGATCACAAGGCCTCTGAACAGGACTGGGCTGGGTTGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 72 bp | GAAACCAGATCTCAGTGCAGGTTAAAGACGCAAACCTaGGCCAGTGAGACAGCTCAGCGGTACAAAGCAATC | + |
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Preference number: 3 (lower is better) Translates to: ETRSQCRLKTQT*ASETAQRYKAI Trigger: GATTGCTTTGTACCGCTGAGCTGTCTCACTGGCTCAGGTTTGCGTCTTTAACCTGCACTGAGATCTGGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR CCA 72 bp | GATGTGATCGAACTGGAAAAGCTGTTGTACCCTGCGTaGGTTCCTGTCCATTCCAGGCTTTCTGTTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: DVIELEKLLYPA*VPVHSRLSVLV Trigger: CACCAAAACAGAAAGCCTGGAATGGACAGGAACCCACGCAGGGTACAACAGCTTTTCCAGTTCGATCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| 3UTR TCA 72 bp | ATAACACAAGCCCAGCAGGGCCTGGGACTTGAGGAGTaGAACACATGTGCGTTTGTTTTTGCTAAGACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ITQAQQGLGLEE*NTCAFVFAKTS Trigger: GCTAGTCTTAGCAAAAACAAACGCACATGTGTTTCACTCCTCAAGTCCCAGGCCCTGCTGGGCTTGTGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR TCA 72 bp | TTCTCCTTCCACGCTGTCCCACACTGTCCGTTTAGTTaGAGCTGGAGTATACACTACATCTCCTCCAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: FSFHAVPHCPFS*SWSIHYISSRI Trigger: AATCCTGGAGGAGATGTAGTGTATACTCCAGCTTCAACTAAACGGACAGTGTGGGACAGCGTGGAAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR GCA 72 bp | CCATTCACCCCAAGACCAGGAGGGCTGCAGGTAAACTaGTATTCTAAACTCCTGATTATCAGAGCTGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PFTPRPGGLQVN*YSKLLIIRAGL Trigger: AAGACCAGCTCTGATAATCAGGAGTTTAGAATAGCAGTTTACCTGCAGCCCTCCTGGTCTTGGGGTGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR GCA 72 bp | CTTGGATGTGATCGAACTGGAAAAGCTGTTGTACCCTaGGTGGGTTCCTGTCCATTCCAGGCTTTCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGCDRTGKAVVP*VGSCPFQAFCF Trigger: AAAACAGAAAGCCTGGAATGGACAGGAACCCACGCAGGGTACAACAGCTTTTCCAGTTCGATCACATCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACAGTGCGGATTTGGAGTaGGGAAGCAGAGGGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LFVNTIIRRTEENHTPADSADLE*GSRGCA Trigger: TGCACACCCTCTGCTTCCCAACTCCAAATCCGCACT...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGGCCTCCATGGGCACCCGTACACACATGGCATATATTAACACAAACACAGAAAAGGCTAAGTTCTaGTGTTTGGTGATGAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLASMGTRTHMAYINTNTEKAKF*CLVMSF Trigger: GAAACTCATCACCAAACACAAGAACTTAGCCTTTTC...TGTGTTTGTGTTAATATATGCCATGTGTGTACGGGTGCCCATGGAGGCCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CCA 72 bp | ACACTTGAGATCGTTTATACAGAGAACGGGTTGTTCTaGCTCACAGCTGTAGATGGTCAACTCAGTAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLEIVYTENGLF*LTAVDGQLSSQ Trigger: TTGACTACTGAGTTGACCATCTACAGCTGTGAGCCAGAACAACCCGTTCTCTGTATAAACGATCTCAAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACGCATGTCAGACAAGCTaGAAGATGTGTCTATTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LFVNTIIRRTEENHTPADACQTS*KMCLFL Trigger: CAGGAATAGACACATCTTCAAGCTTGTCTGACATGC...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CCA 72 bp | ACAGTTCTGAATGACTTGACCAATTTGGAAACCATGTaGCATGTCAATACCACCGTCTTAGAAAAGGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TVLNDLTNLETM*HVNTTVLEKAK Trigger: CTTAGCCTTTTCTAAGACGGTGGTATTGACATGCCACATGGTTTCCAAATTGGTCAAGTCATTCAGAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CCA 72 bp | CCATCGGCTGTCTTTGAAGGGTTTCATATTTCCCCTTaGCCTAGTAGTTCATTATTTTTGTTTGTTAATACT | + |
|
Preference number: 3 (lower is better) Translates to: PSAVFEGFHISP*PSSSLFLFVNT Trigger: AGTATTAACAAACAAAAATAATGAACTACTAGGCCAAGGGGAAATATGAAACCCTTCAAAGACAGCCGATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCGCTGCGAGGCGGTACTaGCTGACCCGAGGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRALQPVRFLFKFSFHAVAARRY*LTRGMS Trigger: TGACATCCCTCGGGTCAGTCAGTACCGCCTCGCAGC...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCCAGAGCCAAGGAGCCTaGCTGGTGTGTGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRALQPVRFLFKFSFHAVQSQGA*LVCGSQ Trigger: CTGGCTGCCACACACCAGTCAGGCTCCTTGGCTCTG...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | AGCGATTCGGAGGGAATGGGAACAAGCTGGCAGAACTTCAACCCAGCCCAGTCCGGCCTCAGAGGACGCTaGCTGCCACAGCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDSEGMGTSWQNFNPAQSGLRGR*LPQLLP Trigger: TGGCAGCAGCTGTGGCAGCCAGCGTCCTCTGAGGCC...GGACTGGGCTGGGTTGAAGTTCTGCCAGCTTGTTCCCATTCCCTCCGAATCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCAGCCTGACTGGTGTGTaGCAGCCAGCGGAGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRALQPVRFLFKFSFHAVSLTGV*QPAEWG Trigger: TCCCCACTCCGCTGGCTGCCACACACCAGTCAGGCT...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCGCCAAGGAGCCTGACTaGTGTGTGGCAGCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRALQPVRFLFKFSFHAVAKEPD*CVAASG Trigger: TCCGCTGGCTGCCACACACCAGTCAGGCTCCTTGGC...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR GCA 90 bp | AGCGATTCGGAGGGAATGGGAACAAGCTGGCAGAACTTCAACCCAGCCCAGTCCGCTGGCTGCCACAGCTaGTGCCACACTGTGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDSEGMGTSWQNFNPAQSAGCHS*CHTVFW Trigger: CCAGAACACAGTGTGGCAGCAGCTGTGGCAGCCAGC...GGACTGGGCTGGGTTGAAGTTCTGCCAGCTTGTTCCCATTCCCTCCGAATCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTATGCCAGTCTACCATTaGGAGGCCAGACTCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPMPVYH*EARLCQ Trigger: TTGACAGAGTCTGGCCTCTCAATGGTAGACTGGCAT...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | AGCGATTCGGAGGGAATGGGAACAAGCTGGCAGAACTTCAACCCAGCCCAGTCCCCCCCACATCCGGTGTaGGTATTCCATGTACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDSEGMGTSWQNFNPAQSPPHPV*VFHVPD Trigger: ATCTGGTACATGGAATACTCACACCGGATGTGGGGG...GGACTGGGCTGGGTTGAAGTTCTGCCAGCTTGTTCCCATTCCCTCCGAATCGCT 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | TCCCTGGCCTCCATGGGCACCCGTACACACATGGCATATATTAACACAAACACACGAGGCGGTACTGACTaGCCCGAGGGATGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLASMGTRTHMAYINTNTRGGTD*PEGCHR Trigger: CCTATGACATCCCTCGGGTCAGTCAGTACCGCCTCG...TGTGTTTGTGTTAATATATGCCATGTGTGTACGGGTGCCCATGGAGGCCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCCCACACTTCTGGTAACTTGTGCTaGGGCAGTAGCAGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNRSGFCSSSPSTLSHTSGNLC*GSSSDR Trigger: CCTGTCACTGCTACTGCCTCAGCACAAGTTACCAGA...AGTGTGGGACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR GCA 90 bp | ACCATGCCTGCATGTCAGACAAGCTTGAAGATGTGTCTATTCCTGAGCCTCTCCTCAGAGGACGCTGGCTaGCACAGCTGCTGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: TMPACQTSLKMCLFLSLSSEDAG*HSCCHT Trigger: AGTGTGGCAGCAGCTGTGGCAGCCAGCGTCCTCTGA...GGAGAGGCTCAGGAATAGACACATCTTCAAGCTTGTCTGACATGCAGGCATGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTGGCCTCCATGGGCACCCGTACACACATGGCATATATTAACACAAACACAGAGGAACACCAGGCCTaGTGTGCCACCAGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SLASMGTRTHMAYINTNTEEHQA*CATSKP Trigger: CGGTTTGCTGGTGGCACAGCAGGCCTGGTGTTCCTC...TGTGTTTGTGTTAATATATGCCATGTGTGTACGGGTGCCCATGGAGGCCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCCCACACTGGTCAGGAGGTCCTCTaGGATCCAAGATTCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSNRSGFCSSSPSTLSHTGQEVL*DPRFSH Trigger: ATGGGAGAATCTTGGATCCCAGAGGACCTCCTGACC...AGTGTGGGACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTCCCCTGAGAGAGCCGTaGGGAACACCAGGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLSVLVGGLLRFYFKPAPLREP*GTPGLL Trigger: CAGCAGGCCTGGTGTTCCTCACGGCTCTCTCAGGGG...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR GCA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTATCTCCTTTATCAGATaGCAGTCTACCATTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPISFIR*QSTIER Trigger: CCTCTCAATGGTAGACTGGCATCTGATAAAGGAGAT...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | CAGCACCTTCCCTGGCCTCCATGGGCACCCGTACACACATGGCATATATTAACATCACTGCTGCCATCTTaGTTCTTCGAGGAAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHLPWPPWAPVHTWHILTSLLPS*FFEEGG Trigger: TCCCCCTTCCTCGAAGAACCAAGATGGCAGCAGTGA...TGTTAATATATGCCATGTGTGTACGGGTGCCCATGGAGGCCAGGGAAGGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTGCCAGCGTCATGTCATaGTTCAGGATTTTAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPASVMS*FRILNS Trigger: AGAATTTAAAATCCTGAACCATGACATGACGCTGGC...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTGATGTCATAGGACTCTaGTTTTTCTTCCAATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPDVIGL*FFFQST Trigger: AGTGGATTGGAAGAAAAACCAGAGTCCTATGACATC...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTGGTGCTGTACTGTCCTaGCCTCAGAGGACGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLSVLVGGLLRFYFKPAGAVLS*PQRTLA Trigger: AGCCAGCGTCCTCTGAGGCCAGGACAGTACAGCACC...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCAAGATTCTCCCATTTTaGGGAAGGAGTTGTAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: SRALQPVRFLFKFSFHAVKILPF*GRSCKR Trigger: TCGTTTACAACTCCTTCCCCAAAATGGGAGAATCTT...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACGCCAAAGGGCACCACTaGGCAGAGCCAAGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFVNTIIRRTEENHTPADAKGHH*AEPRSL Trigger: CAGGCTCCTTGGCTCTGCTCAGTGGTGCCCTTTGGC...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTAGCAGGCAGGATGTATaGAAGGCCTACAGCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLSVLVGGLLRFYFKPASRQDV*KAYSSP Trigger: GGGCGAGCTGTAGGCCTTGCATACATCCTGCCTGCT...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR GCA 90 bp | ACCATGCCTGCATGTCAGACAAGCTTGAAGATGTGTCTATTCCTGAGCCTCTCCGTACTTTTGGAACTCTaGTTCCCACTCTTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMPACQTSLKMCLFLSLSVLLEL*FPLFLA Trigger: AGCCAGGAAGAGTGGGAAGCAGAGTTCCAAAAGTAC...GGAGAGGCTCAGGAATAGACACATCTTCAAGCTTGTCTGACATGCAGGCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CAA 72 bp | ACACAAAGACAGAAGGAGAGAACCAACTCGCAGGAGTaGTCCCCTTTTCTCTGCATGCACGTGCATGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: TQRQKERTNSQE*SPFLCMHVHVQ Trigger: TTGTACATGCACGTGCATGCAGAGAAAAGGGGACAACTCCTGCGAGTTGGTTCTCTCCTTCTGTCTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CAA 72 bp | CCTGCGTGGGTTCCTGTCCATTCCAGGCTTTCTGTTTaGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAWVPVHSRLSV*VGGLLRFYFKP Trigger: TGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGAATGGACAGGAACCCACGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTCTCAACCACAGGAGCTaGCGAGTTTCTGGTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLSVLVGGLLRFYFKPALNHRS*RVSGNL Trigger: CAAGTTACCAGAAACTCGGCAGCTCCTGTGGTTGAG...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CAA 72 bp | TGGTCCAGTGCCCATCTCAGAACAGTTCTGAATGACTaGACCAATTTGGAAACCATGTGGCATGTCAATACC | + |
|
Preference number: 4 (lower is better) Translates to: WSSAHLRTVLND*TNLETMWHVNT Trigger: GGTATTGACATGCCACATGGTTTCCAAATTGGTCAAGTCATTCAGAACTGTTCTGAGATGGGCACTGGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CAA 72 bp | TTAAAAGTGCCTGCTGCTCTTCCAGAGGACCCGTGTTaGGTTACTAGCACCCGTATCAGGCATATTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LKVPAALPEDPC*VTSTRIRHIKI Trigger: GATTTTAATATGCCTGATACGGGTGCTAGTAACCAAACACGGGTCCTCTGGAAGAGCAGCAGGCACTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACCTTTCATGCCACGGTTaGGCCAACCCTTTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFVNTIIRRTEENHTPADLSCHG*ANPFSK Trigger: TTTGGAGAAAGGGTTGGCTCAACCGTGGCATGAAAG...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | ACCATGCCTGCATGTCAGACAAGCTTGAAGATGTGTCTATTCCTGAGCCTCTCCAATTCTGGAAATTGCTaGTACTTTTGGAACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMPACQTSLKMCLFLSLSNSGNC*YFWNSA Trigger: AGCAGAGTTCCAAAAGTACCAGCAATTTCCAGAATT...GGAGAGGCTCAGGAATAGACACATCTTCAAGCTTGTCTGACATGCAGGCATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CAA 72 bp | AATACCACCGTCTTAGAAAAGGCTAAGTTCTTGTGTTaGGTGATGAGTTTCCAAGGCAGTTCCAGTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTTVLEKAKFLC*VMSFQGSSSPR Trigger: CCTAGGACTGGAACTGCCTTGGAAACTCATCACCAAACACAAGAACTTAGCCTTTTCTAAGACGGTGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CAA 72 bp | GCCCATCTCAGAACAGTTCTGAATGACTTGACCAATTaGGAAACCATGTGGCATGTCAATACCACCGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AHLRTVLNDLTN*ETMWHVNTTVL Trigger: TAAGACGGTGGTATTGACATGCCACATGGTTTCCAAATTGGTCAAGTCATTCAGAACTGTTCTGAGATGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| 3UTR CAA 72 bp | CCTGTCCATTCCAGGCTTTCTGTTTTGGTGGGAGGCTaGTTAAGGTTCTATTTTAAGCCAGCTTTGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVHSRLSVLVGG*LRFYFKPALSC Trigger: ACAAGACAAAGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGAATGGACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCTTTCTGTTTTGGTGGGAGGCTTGTTAAGGTTCTATTTTAAGCCAGCTAATTGCTGGTACTTTTaGAACTCTGCTTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLSVLVGGLLRFYFKPANCWYF*NSASHS Trigger: AGAGTGGGAAGCAGAGTTCCAAAAGTACCAGCAATT...AGCTGGCTTAAAATAGAACCTTAACAAGCCTCCCACCAAAACAGAAAGCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS GCA 90 bp | TGTCCCACTGCACACCAGAAGCCATCGGCCCACCGCCCGCTCGGCTaGCCTCGAAGGAAGGGACACTGTCCCTTTTCCGGATTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPTAHQKPSAHRPLG*PRRKGHCPFSGLQS Trigger: GCTCTGCAATCCGGAAAAGGGACAGTGTCCCTTCCTTCGAGGGCAGCCGAGCGGGCGGTGGGCCGATGGCTTCTGGTGTGCAGTGGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS TCA 90 bp | CGAGGCCAGCATCCAGCCCTGCCACAAAAGCCCCTGAGAGAGCCGTaGGGAACACCAGGCCTGCTGTGCCACCAGCAAACCGTCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: RGQHPALPQKPLREP*GTPGLLCHQQTVST Trigger: GGTTGAGACGGTTTGCTGGTGGCACAGCAGGCCTGGTGTTCCTCACGGCTCTCTCAGGGGCTTTTGTGGCAGGGCTGGATGCTGGCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS CCA 90 bp | GCCACTTCAGTGATGGTGCTGTACTGTCCTGGCCTCAGAGGACGCTaGCTGCCACAGCTGCTGCCACACTGTGTTCTGGACGCCACCCTA | + |
|
Preference number: 5 (lower is better) Translates to: ATSVMVLYCPGLRGR*LPQLLPHCVLDATL Trigger: TAGGGTGGCGTCCAGAACACAGTGTGGCAGCAGCTGTGGCAGCCAGCGTCCTCTGAGGCCAGGACAGTACAGCACCATCACTGAAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
||
| CDS CCA 90 bp | GTAACTTGTGCTGAGGCAGTAGCAGTGACAGGGAGGTCCACAGACTaGCACAGTAGAGAACCAGTGCTGACCCCAGGTGGGCTGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTCAEAVAVTGRSTD*HSREPVLTPGGLRG Trigger: GCCTCGCAGCCCACCTGGGGTCAGCACTGGTTCTCTACTGTGCCAGTCTGTGGACCTCCCTGTCACTGCTACTGCCTCAGCACAAGTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS GCA 90 bp | CGCTCGGCTGCCCTCGAAGGAAGGGACACTGTCCCTTTTCCGGATTaGAGAGCCACTTCAGTGATGGTGCTGTACTGTCCTGGCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RSAALEGRDTVPFPD*RATSVMVLYCPGLR Trigger: TCTGAGGCCAGGACAGTACAGCACCATCACTGAAGTGGCTCTGCAATCCGGAAAAGGGACAGTGTCCCTTCCTTCGAGGGCAGCCGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 90 bp | TTCATGAGCCAAAGGGCACCACTGAGCAGAGCCAAGGAGCCTGACTaGTGTGTGGCAGCCAGCGGAGTGGGGACGTACATAAGCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: FMSQRAPLSRAKEPD*CVAASGVGTYISRV Trigger: CACTCTGCTTATGTACGTCCCCACTCCGCTGGCTGCCACACACCAGTCAGGCTCCTTGGCTCTGCTCAGTGGTGCCCTTTGGCTCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS-3UTR CAA 90 bp | AGCGATTCGGAGGGAATGGGAACAAGCTGGCAGAACTTCAACCCAGCCCAGTCCCCCACTCTTCCTGGCTaGTGGGCGGCTTCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SDSEGMGTSWQNFNPAQSPTLPG*WAASSP Trigger: AGGAGATGAAGCCGCCCACAAGCCAGGAAGAGTGGG...GGACTGGGCTGGGTTGAAGTTCTGCCAGCTTGTTCCCATTCCCTCCGAATCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 90 bp | AAGGAAGGGACACTGTCCCTTTTCCGGATTGCAGAGCCACTTCAGTaGTGGTGCTGTACTGTCCTGGCCTCAGAGGACGCTGGCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: KEGTLSLFRIAEPLQ*WCCTVLASEDAGCH Trigger: GTGGCAGCCAGCGTCCTCTGAGGCCAGGACAGTACAGCACCATCACTGAAGTGGCTCTGCAATCCGGAAAAGGGACAGTGTCCCTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 90 bp | TTCATTCATGAGCCAAAGGGCACCACTGAGCAGAGCCAAGGAGCCTaGCTGGTGTGTGGCAGCCAGCGGAGTGGGGACGTACATAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: FIHEPKGTTEQSQGA*LVCGSQRSGDVHKQ Trigger: CTGCTTATGTACGTCCCCACTCCGCTGGCTGCCACACACCAGTCAGGCTCCTTGGCTCTGCTCAGTGGTGCCCTTTGGCTCATGAATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 90 bp | AGAGAACCAGTGCTGACCCCAGGTGGGCTGCGAGGCGGTACTGACTaGCCCGAGGGATGTCATAGGACTCTGGTTTTTCTTCCAATCCAC | + |
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Preference number: 5 (lower is better) Translates to: REPVLTPGGLRGGTD*PEGCHRTLVFLPIH Trigger: GTGGATTGGAAGAAAAACCAGAGTCCTATGACATCCCTCGGGTCAGTCAGTACCGCCTCGCAGCCCACCTGGGGTCAGCACTGGTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 90 bp | GGGAGAAGGTCAGGAGGTCCTCTGGGATCCAAGATTCTCCCATTTTaGGGAAGGAGTTGTAAACGAGGCCAGCATCCAGCCCTGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: GRRSGGPLGSKILPF*GRSCKRGQHPALPQ Trigger: TTGTGGCAGGGCTGGATGCTGGCCTCGTTTACAACTCCTTCCCCAAAATGGGAGAATCTTGGATCCCAGAGGACCTCCTGACCTTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS-3UTR CAA 90 bp | GTTGGGAAGCAGAGGGTGTGCAAGCTGCCCTGGTCCCCTTCTTGGAAGGCTCCTATGTACCAGATAAACTaGAATTCCGCCAGCGTCATG | + |
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Preference number: 5 (lower is better) Translates to: VGKQRVCKLPWSPSWKAPMYQIN*NSASVM Trigger: CATGACGCTGGCGGAATTCAAGTTTATCTGGTACAT...AGGAGCCTTCCAAGAAGGGGACCAGGGCAGCTTGCACACCCTCTGCTTCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 90 bp | AGACTAAGCCACAGAGGGCGAGAACACGTCCTTTCATGCCACGGTTaGGCCAACCCTTTCTCCAAAAGTAGGCAGCAGGCAGGATGTATG | + |
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Preference number: 5 (lower is better) Translates to: RLSHRGREHVLSCHG*ANPFSKSRQQAGCM Trigger: CATACATCCTGCCTGCTGCCTACTTTTGGAGAAAGGGTTGGCTCAACCGTGGCATGAAAGGACGTGTTCTCGCCCTCTGTGGCTTAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 90 bp | CCACCTGTGCATATGCCAAAGCTAGCAGAGTCACTGCTGCCATCTTaGTTCTTCGAGGAAGGGGGATTCTCCGGGACAGGAAATAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: PPVHMPKLAESLLPS*FFEEGGFSGTGNRA Trigger: TGCTCTATTTCCTGTCCCGGAGAATCCCCCTTCCTCGAAGAACCAAGATGGCAGCAGTGACTCTGCTAGCTTTGGCATATGCACAGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCCCACACTTGTCCCTTTTCCGGATaGCAGAGCCACTTCAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: PSNRSGFCSSSPSTLSHTCPFSG*QSHFSD Trigger: ATCACTGAAGTGGCTCTGCAATCCGGAAAAGGGACA...AGTGTGGGACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS-3UTR CAA 90 bp | TCCCGGGCCCTCCAACCGGTCAGGTTTCTGTTCAAGTTCTCCTTCCACGCTGTCAAATTGCTGGTACTTTaGGAACTCTGCTTCCCACTC | + |
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Preference number: 5 (lower is better) Translates to: SRALQPVRFLFKFSFHAVKLLVL*ELCFPL Trigger: GAGTGGGAAGCAGAGTTCCAAAAGTACCAGCAATTT...GACAGCGTGGAAGGAGAACTTGAACAGAAACCTGACCGGTTGGAGGGCCCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS-3UTR CAA 90 bp | ACCATGCCTGCATGTCAGACAAGCTTGAAGATGTGTCTATTCCTGAGCCTCTCCGTCACTGCTGCCATCTaGGTTCTTCGAGGAAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: TMPACQTSLKMCLFLSLSVTAAI*VLRGRG Trigger: CCCCCTTCCTCGAAGAACCAAGATGGCAGCAGTGAC...GGAGAGGCTCAGGAATAGACACATCTTCAAGCTTGTCTGACATGCAGGCATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 90 bp | GCTTGTGGGCGGCTTCATCTCCTTTATCAGATGCCAGTCTACCATTaGGAGGCCAGACTCTGTCAACCTGGTCACTCCTCCCAGAATAAC | + |
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Preference number: 5 (lower is better) Translates to: ACGRLHLLYQMPVYH*EARLCQPGHSSQNN Trigger: GTTATTCTGGGAGGAGTGACCAGGTTGACAGAGTCTGGCCTCTCAATGGTAGACTGGCATCTGATAAAGGAGATGAAGCCGCCCACAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 90 bp | AGGCAGGATGTATGCAAGGCCTACAGCTCGCCCCCACATCCGGTGTaGGTATTCCATGTACCAGATAAACTTGAATTCCGCCAGCGTCAT | + |
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Preference number: 5 (lower is better) Translates to: RQDVCKAYSSPPHPV*VFHVPDKLEFRQRH Trigger: ATGACGCTGGCGGAATTCAAGTTTATCTGGTACATGGAATACTCACACCGGATGTGGGGGCGAGCTGTAGGCCTTGCATACATCCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 90 bp | TCTGGAAATTGCTGGTACTTTTGGAACTCTGCTTCCCACTCTTCCTaGCTTGTGGGCGGCTTCATCTCCTTTATCAGATGCCAGTCTACC | + |
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Preference number: 5 (lower is better) Translates to: SGNCWYFWNSASHSS*LVGGFISFIRCQST Trigger: GGTAGACTGGCATCTGATAAAGGAGATGAAGCCGCCCACAAGCCAGGAAGAGTGGGAAGCAGAGTTCCAAAAGTACCAGCAATTTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 90 bp | ATTGCTGGTACTTTTGGAACTCTGCTTCCCACTCTTCCTGGCTTGTaGGCGGCTTCATCTCCTTTATCAGATGCCAGTCTACCATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: IAGTFGTLLPTLPGL*AASSPLSDASLPLR Trigger: TCTCAATGGTAGACTGGCATCTGATAAAGGAGATGAAGCCGCCCACAAGCCAGGAAGAGTGGGAAGCAGAGTTCCAAAAGTACCAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS-3UTR CAA 90 bp | TTGTTTGTTAATACTATCATTAGAAGGACAGAGGAGAACCACACACCAGCAGACGATGCCAGTCTACCATaGAGAGGCCAGACTCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LFVNTIIRRTEENHTPADDASLP*RGQTLS Trigger: TGACAGAGTCTGGCCTCTCAATGGTAGACTGGCATC...GTCTGCTGGTGTGTGGTTCTCCTCTGTCCTTCTAATGATAGTATTAACAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 72 bp | GTTCTGGACGCCACCCTAGGGACCAGGAGCCCGACATaGCGGCTCCCCGTCAAGGCCCTCAGGGACGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLDATLGTRSPT*RLPVKALRDGR Trigger: CCTTCCGTCCCTGAGGGCCTTGACGGGGAGCCGCAATGTCGGGCTCCTGGTCCCTAGGGTGGCGTCCAGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS GCA 72 bp | GCACACCAGAAGCCATCGGCCCACCGCCCGCTCGGCTaGCCTCGAAGGAAGGGACACTGTCCCTTTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: AHQKPSAHRPLG*PRRKGHCPFSG Trigger: TCCGGAAAAGGGACAGTGTCCCTTCCTTCGAGGGCAGCCGAGCGGGCGGTGGGCCGATGGCTTCTGGTGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 90 bp | CCACACTGTGTTCTGGACGCCACCCTAGGGACCAGGAGCCCGACATaGCGGCTCCCCGTCAAGGCCCTCAGGGACGGAAGGAGCAACCGT | + |
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Preference number: 6 (lower is better) Translates to: PHCVLDATLGTRSPT*RLPVKALRDGRSNR Trigger: ACGGTTGCTCCTTCCGTCCCTGAGGGCCTTGACGGGGAGCCGCAATGTCGGGCTCCTGGTCCCTAGGGTGGCGTCCAGAACACAGTGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 72 bp | GGAGGTCCACAGACTGGCACAGTAGAGAACCAGTGCTaGCCCCAGGTGGGCTGCGAGGCGGTACTGACTGAC | + |
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Preference number: 6 (lower is better) Translates to: GGPQTGTVENQC*PQVGCEAVLTD Trigger: GTCAGTCAGTACCGCCTCGCAGCCCACCTGGGGTCAGCACTGGTTCTCTACTGTGCCAGTCTGTGGACCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS GCA 72 bp | TGGTGCTGTACTGTCCTGGCCTCAGAGGACGCTGGCTaGCACAGCTGCTGCCACACTGTGTTCTGGACGCCA | + |
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Preference number: 6 (lower is better) Translates to: WCCTVLASEDAG*HSCCHTVFWTP Trigger: TGGCGTCCAGAACACAGTGTGGCAGCAGCTGTGGCAGCCAGCGTCCTCTGAGGCCAGGACAGTACAGCACCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 72 bp | GCTGAGGCAGTAGCAGTGACAGGGAGGTCCACAGACTaGCACAGTAGAGAACCAGTGCTGACCCCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AEAVAVTGRSTD*HSREPVLTPGG Trigger: CCCACCTGGGGTCAGCACTGGTTCTCTACTGTGCCAGTCTGTGGACCTCCCTGTCACTGCTACTGCCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 72 bp | CAAAGGGCACCACTGAGCAGAGCCAAGGAGCCTGACTaGTGTGTGGCAGCCAGCGGAGTGGGGACGTACATA | + |
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Preference number: 6 (lower is better) Translates to: QRAPLSRAKEPD*CVAASGVGTYI Trigger: TATGTACGTCCCCACTCCGCTGGCTGCCACACACCAGTCAGGCTCCTTGGCTCTGCTCAGTGGTGCCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 90 bp | CCGCTCGGCTGCCCTCGAAGGAAGGGACACTGTCCCTTTTCCGGATaGCAGAGCCACTTCAGTGATGGTGCTGTACTGTCCTGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PLGCPRRKGHCPFSG*QSHFSDGAVLSWPQ Trigger: CTGAGGCCAGGACAGTACAGCACCATCACTGAAGTGGCTCTGCAATCCGGAAAAGGGACAGTGTCCCTTCCTTCGAGGGCAGCCGAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 72 bp | GTGCTGACCCCAGGTGGGCTGCGAGGCGGTACTGACTaGCCCGAGGGATGTCATAGGACTCTGGTTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VLTPGGLRGGTD*PEGCHRTLVFL Trigger: AAGAAAAACCAGAGTCCTATGACATCCCTCGGGTCAGTCAGTACCGCCTCGCAGCCCACCTGGGGTCAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 72 bp | CACAGAGGGCGAGAACACGTCCTTTCATGCCACGGTTaGGCCAACCCTTTCTCCAAAAGTAGGCAGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: HRGREHVLSCHG*ANPFSKSRQQA Trigger: TGCCTGCTGCCTACTTTTGGAGAAAGGGTTGGCTCAACCGTGGCATGAAAGGACGTGTTCTCGCCCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 72 bp | AACCACAGGAGCTGCCGAGTTTCTGGTAACTTGTGCTaGGGCAGTAGCAGTGACAGGGAGGTCCACAGACTG | + |
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Preference number: 6 (lower is better) Translates to: NHRSCRVSGNLC*GSSSDREVHRL Trigger: CAGTCTGTGGACCTCCCTGTCACTGCTACTGCCTCAGCACAAGTTACCAGAAACTCGGCAGCTCCTGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS GCA 72 bp | GCCCTCGAAGGAAGGGACACTGTCCCTTTTCCGGATTaGAGAGCCACTTCAGTGATGGTGCTGTACTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ALEGRDTVPFPD*RATSVMVLYCP Trigger: AGGACAGTACAGCACCATCACTGAAGTGGCTCTGCAATCCGGAAAAGGGACAGTGTCCCTTCCTTCGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 72 bp | TGCCCTCGAAGGAAGGGACACTGTCCCTTTTCCGGATaGCAGAGCCACTTCAGTGATGGTGCTGTACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: CPRRKGHCPFSG*QSHFSDGAVLS Trigger: GGACAGTACAGCACCATCACTGAAGTGGCTCTGCAATCCGGAAAAGGGACAGTGTCCCTTCCTTCGAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 72 bp | TCAGGAGGTCCTCTGGGATCCAAGATTCTCCCATTTTaGGGAAGGAGTTGTAAACGAGGCCAGCATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SGGPLGSKILPF*GRSCKRGQHPA Trigger: GGCTGGATGCTGGCCTCGTTTACAACTCCTTCCCCAAAATGGGAGAATCTTGGATCCCAGAGGACCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 72 bp | GCGGCTTCATCTCCTTTATCAGATGCCAGTCTACCATaGAGAGGCCAGACTCTGTCAACCTGGTCACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AASSPLSDASLP*RGQTLSTWSLL Trigger: GAGGAGTGACCAGGTTGACAGAGTCTGGCCTCTCAATGGTAGACTGGCATCTGATAAAGGAGATGAAGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS TCA 72 bp | GTATGCAAGGCCTACAGCTCGCCCCCACATCCGGTGTaGGTATTCCATGTACCAGATAAACTTGAATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: VCKAYSSPPHPV*VFHVPDKLEFR Trigger: GCGGAATTCAAGTTTATCTGGTACATGGAATACTCACACCGGATGTGGGGGCGAGCTGTAGGCCTTGCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CCA 72 bp | ACTTTTGGAACTCTGCTTCCCACTCTTCCTGGCTTGTaGGCGGCTTCATCTCCTTTATCAGATGCCAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: TFGTLLPTLPGL*AASSPLSDASL Trigger: TAGACTGGCATCTGATAAAGGAGATGAAGCCGCCCACAAGCCAGGAAGAGTGGGAAGCAGAGTTCCAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 90 bp | GAAATTGCTGGTACTTTTGGAACTCTGCTTCCCACTCTTCCTGGCTaGTGGGCGGCTTCATCTCCTTTATCAGATGCCAGTCTACCATTG | + |
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Preference number: 6 (lower is better) Translates to: EIAGTFGTLLPTLPG*WAASSPLSDASLPL Trigger: CAATGGTAGACTGGCATCTGATAAAGGAGATGAAGCCGCCCACAAGCCAGGAAGAGTGGGAAGCAGAGTTCCAAAAGTACCAGCAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 90 bp | GCTCGCCCCCACATCCGGTGTGAGTATTCCATGTACCAGATAAACTaGAATTCCGCCAGCGTCATGTCATGGTTCAGGATTTTAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: ARPHIRCEYSMYQIN*NSASVMSWFRILNS Trigger: AGAATTTAAAATCCTGAACCATGACATGACGCTGGCGGAATTCAAGTTTATCTGGTACATGGAATACTCACACCGGATGTGGGGGCGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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| CDS CAA 72 bp | CACATCCGGTGTGAGTATTCCATGTACCAGATAAACTaGAATTCCGCCAGCGTCATGTCATGGTTCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: HIRCEYSMYQIN*NSASVMSWFRI Trigger: AATCCTGAACCATGACATGACGCTGGCGGAATTCAAGTTTATCTGGTACATGGAATACTCACACCGGATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045562.6 |
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