Pregenerated sensors for COX10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042148Ensembl transcript IDs: ENSMUST00000049091.9
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGATTGGACGTGGTGGTGTGTGCTGGCAATGTGGCCAGGGATCTaGAGGCAACCGTTTGGAATCCCCACTCCCAGTGGGCAGCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: WDWTWWCVLAMWPGI*RQPFGIPTPSGQPR Trigger: CCTGGGCTGCCCACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCAGCACACACCACCACGTCCAATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 90 bp | GTGGTGTGTGCTGGCAATGTGGCCAGGGATCTGCAGGCAACCGTTTaGAATCCCCACTCCCAGTGGGCAGCCCAGGCCAGGTGTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: VVCAGNVARDLQATV*NPHSQWAAQARCCV Trigger: AACACAACACCTGGCCTGGGCTGCCCACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCAGCACACACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 90 bp | GTGGCCAGGGATCTGCAGGCAACCGTTTGGAATCCCCACTCCCAGTaGGCAGCCCAGGCCAGGTGTTGTGTTACTTCAGGGAATGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: VARDLQATVWNPHSQ*AAQARCCVTSGNVW Trigger: CCACACATTCCCTGAAGTAACACAACACCTGGCCTGGGCTGCCCACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 90 bp | CCTGGTTTGGGGTGGGATTGGACGTGGTGGTGTGTGCTGGCAATGTaGCCAGGGATCTGCAGGCAACCGTTTGGAATCCCCACTCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: PGLGWDWTWWCVLAM*PGICRQPFGIPTPS Trigger: ACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCAGCACACACCACCACGTCCAATCCCACCCCAAACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 90 bp | GGACCCATGGCCACTAGGAGCCCTGCTGCCCTCTCTGAACACCACTaGGCACGGAGGCCAACTTCTGGACTTAGGAGGTACCAGTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: GPMATRSPAALSEHH*ARRPTSGLRRYQCR Trigger: TCTACACTGGTACCTCCTAAGTCCAGAAGTTGGCCTCCGTGCCCAGTGGTGTTCAGAGAGGGCAGCAGGGCTCCTAGTGGCCATGGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 90 bp | CCTGCATTTTACACCAGAGGCCATGGAGTTCCAGAGCTGGACCCATaGCCACTAGGAGCCCTGCTGCCCTCTCTGAACACCACTGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: PAFYTRGHGVPELDP*PLGALLPSLNTTGH Trigger: GTGCCCAGTGGTGTTCAGAGAGGGCAGCAGGGCTCCTAGTGGCCATGGGTCCAGCTCTGGAACTCCATGGCCTCTGGTGTAAAATGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 90 bp | CTTTGCCAGAATCACCAAAATACGCTTCCTGCTGGCCCAGGGCAGTaGTGTCCGTGTGTCTGTCTGCAGGTGTCTGCTCTCATGTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: LCQNHQNTLPAGPGQ*CPCVCLQVSALMFP Trigger: GGGGAACATGAGAGCAGACACCTGCAGACAGACACACGGACAGCACTGCCCTGGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 90 bp | GACACCATCCAACTCTCTTTGCCAGAATCACCAAAATACGCTTCCTaGTGGCCCAGGGCAGTGCTGTCCGTGTGTCTGTCTGCAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: DTIQLSLPESPKYAS*WPRAVLSVCLSAGV Trigger: GACACCTGCAGACAGACACACGGACAGCACTGCCCTGGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAGAGAGTTGGATGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 90 bp | CAGCACCAGATGATCTGCCACCAGCTGACACCATCCAACTCTCTTTaGCAGAATCACCAAAATACGCTTCCTGCTGGCCCAGGGCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: QHQMICHQLTPSNSL*QNHQNTLPAGPGQC Trigger: GCACTGCCCTGGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAGAGAGTTGGATGGTGTCAGCTGGTGGCAGATCATCTGGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 90 bp | ACCATCCAACTCTCTTTGCCAGAATCACCAAAATACGCTTCCTGCTaGCCCAGGGCAGTGCTGTCCGTGTGTCTGTCTGCAGGTGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: TIQLSLPESPKYASC*PRAVLSVCLSAGVC Trigger: GCAGACACCTGCAGACAGACACACGGACAGCACTGCCCTGGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAGAGAGTTGGATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 90 bp | GAATCAACACACTTTACAGACTTTAAGGCCGCAACAAGTCCTAGATaGTCTTTGCAGACATCGCCATTCCCTGTTACCACAGGACACAGC | + |
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Preference number: 1 (lower is better) Translates to: ESTHFTDFKAATSPR*SLQTSPFPVTTGHS Trigger: GCTGTGTCCTGTGGTAACAGGGAATGGCGATGTCTGCAAAGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGTAAAGTGTGTTGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 90 bp | GTACTGACCCCATATGCTAGTCCCTTTCTTGTTTGGGAAGCAGTTTaGATATTAATATTAAAAGGACTGGGAAGTGACGACACAGCACCA | + |
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Preference number: 1 (lower is better) Translates to: VLTPYASPFLVWEAV*ILILKGLGSDDTAP Trigger: TGGTGCTGTGTCGTCACTTCCCAGTCCTTTTAATATTAATATCCAAACTGCTTCCCAAACAAGAAAGGGACTAGCATATGGGGTCAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CAA 90 bp | GGTGGTGTGTGCTGGCAATGTGGCCAGGGATCTGCAGGCAACCGTTaGGAATCCCCACTCCCAGTGGGCAGCCCAGGCCAGGTGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GGVCWQCGQGSAGNR*ESPLPVGSPGQVLC Trigger: ACACAACACCTGGCCTGGGCTGCCCACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCAGCACACACCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCAATGTGGCCAGGGATCTGCAGGCAACCGTTTGGAATCCCCACTCCCAGTGCCAAAATACGCTTCCTaGTGGCCCAGGGCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WQCGQGSAGNRLESPLPVPKYAS*WPRAVL Trigger: CAGCACTGCCCTGGGCCAGCAGGAAGCGTATTTTGG...CACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR TCA 90 bp | TGGTCACGGCCAAAGCCTTTCTTCCACATTTTGAGAGGACAGTCCAAATTCAAGCCCTGGAGGGAATCCTaGCGGGGCCCAGCACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: WSRPKPFFHILRGQSKFKPWRES*RGPAPW Trigger: CCAGGGTGCTGGGCCCCGTCAGGATTCCCTCCAGGG...CTTGAATTTGGACTGTCCTCTCAAAATGTGGAAGAAAGGCTTTGGCCGTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CAA 90 bp | ACAGCACCAGATGATCTGCCACCAGCTGACACCATCCAACTCTCTTaGCCAGAATCACCAAAATACGCTTCCTGCTGGCCCAGGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TAPDDLPPADTIQLS*PESPKYASCWPRAV Trigger: CACTGCCCTGGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAGAGAGTTGGATGGTGTCAGCTGGTGGCAGATCATCTGGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CAA 90 bp | AACCGTTTGGAATCCCCACTCCCAGTGGGCAGCCCAGGCCAGGTGTaGTGTTACTTCAGGGAATGTGTGGTTGAGAACACTGGTAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: NRLESPLPVGSPGQV*CYFRECVVENTGRV Trigger: TACCCTACCAGTGTTCTCAACCACACATTCCCTGAAGTAACACAACACCTGGCCTGGGCTGCCCACTGGGAGTGGGGATTCCAAACGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTGCAGACATCGCCATTCCCTGTTACCACAGGACACAGCCAGGCGGTAACAAGCACTCACCTGTTTaGGCAATGACCACAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LFADIAIPCYHRTQPGGNKHSPV*AMTTVA Trigger: GGCCACTGTGGTCATTGCTCAAACAGGTGAGTGCTT...GTTACCGCCTGGCTGTGTCCTGTGGTAACAGGGAATGGCGATGTCTGCAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCATGGAGTTCCAGAGCTGGACCCATGGCCACTAGGAGCCCTGCTGCCCTCTTGTAGAAATGTGGTTTaGACGAAAGAGATAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GHGVPELDPWPLGALLPSCRNVV*TKEISE Trigger: CTCACTTATCTCTTTCGTGCAAACCACATTTCTACA...AGAGGGCAGCAGGGCTCCTAGTGGCCATGGGTCCAGCTCTGGAACTCCATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CCA 90 bp | CATAAAATGGTTGCTGACGCAGCTCACCCTCTCCCTCAGGTTATGCTGAGTGATAAATACGCTTCCTGCTaGCCCAGGGCAGTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: HKMVADAAHPLPQVMLSDKYASC*PRAVLS Trigger: GGACAGCACTGCCCTGGGCCAGCAGGAAGCGTATTT...ATCACTCAGCATAACCTGAGGGAGAGGGTGAGCTGCGTCAGCAACCATTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CCA 90 bp | CATAAAATGGTTGCTGACGCAGCTCACCCTCTCCCTCAGGTTATGCTGAGTGATGAGAGAACACAGGGCTaGAGGGAAAGATGCATAAAG | + |
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Preference number: 2 (lower is better) Translates to: HKMVADAAHPLPQVMLSDERTQG*RERCIK Trigger: CTTTATGCATCTTTCCCTCCAGCCCTGTGTTCTCTC...ATCACTCAGCATAACCTGAGGGAGAGGGTGAGCTGCGTCAGCAACCATTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CAA 90 bp | CAAGTGCTCTCCCTTTGGTCACGGCCAAAGCCTTTCTTCCACATTTaGAGAGGACAGTCCAAATTCAAGAACCGTTTTCTGTGTGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: QVLSLWSRPKPFFHI*RGQSKFKNRFLCGL Trigger: TAAGCCACACAGAAAACGGTTCTTGAATTTGGACTGTCCTCTCAAAATGTGGAAGAAAGGCTTTGGCCGTGACCAAAGGGAGAGCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CCA 90 bp | TGGTCACGGCCAAAGCCTTTCTTCCACATTTTGAGAGGACAGTCCAAATTCAAGACTTCAGGGAATGTGTaGTTGAGAACACTGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: WSRPKPFFHILRGQSKFKTSGNV*LRTLVG Trigger: CCCTACCAGTGTTCTCAACCACACATTCCCTGAAGT...CTTGAATTTGGACTGTCCTCTCAAAATGTGGAAGAAAGGCTTTGGCCGTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAACTGTTTTATTGCAGCAGGAGGAGAATCAACACACTTTACAGACTTTAAGCGTGGTGGTGTGTGCTaGCAATGTGGCCAGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: FNCFIAAGGESTHFTDFKRGGVC*QCGQGS Trigger: AGATCCCTGGCCACATTGCCAGCACACACCACCACG...CTTAAAGTCTGTAAAGTGTGTTGATTCTCCTCCTGCTGCAATAAAACAGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAACTGTTTTATTGCAGCAGGAGGAGAATCAACACACTTTACAGACTTTAAGTGTCTGCAGGCACTCTaGACACCATCCTCCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: FNCFIAAGGESTHFTDFKCLQAL*TPSSPP Trigger: AGGTGGGGAGGATGGTGTCCAGAGTGCCTGCAGACA...CTTAAAGTCTGTAAAGTGTGTTGATTCTCCTCCTGCTGCAATAAAACAGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CAA 90 bp | CAGAGGTACCGGGCACACTGTCTGCAGGCACTCTGGACACCATCCTCCCCACCTGTGTGTGTGTGTGTGTaGGGGGCGGGGCTGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: QRYRAHCLQALWTPSSPPVCVCV*GAGLAW Trigger: CCAGGCCAGCCCCGCCCCCAACACACACACACACAC...AGGTGGGGAGGATGGTGTCCAGAGTGCCTGCAGACAGTGTGCCCGGTACCTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 72 bp | CTGCTGGCCCAGGGCAGTGCTGTCCGTGTGTCTGTCTaGAGGTGTCTGCTCTCATGTTCCCCACAGACCGGC | + |
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Preference number: 3 (lower is better) Translates to: LLAQGSAVRVSV*RCLLSCSPQTG Trigger: GCCGGTCTGTGGGGAACATGAGAGCAGACACCTGCAGACAGACACACGGACAGCACTGCCCTGGGCCAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 72 bp | ACGTGGTGGTGTGTGCTGGCAATGTGGCCAGGGATCTaGAGGCAACCGTTTGGAATCCCCACTCCCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: TWWCVLAMWPGI*RQPFGIPTPSG Trigger: CCCACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCAGCACACACCACCACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | GCCACTAGGAGCCCTGCTGCCCTCTCTGAACACCACTaGGCACGGAGGCCAACTTCTGGACTTAGGAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: ATRSPAALSEHH*ARRPTSGLRRY Trigger: GTACCTCCTAAGTCCAGAAGTTGGCCTCCGTGCCCAGTGGTGTTCAGAGAGGGCAGCAGGGCTCCTAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR TCA 72 bp | CGTTTTCTGTGTGGCTTAAAGCCCTGGAGGGAATCCTaGCGGGGCCCAGCACCCTGGGAGATCAAGGAACTC | + |
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Preference number: 3 (lower is better) Translates to: RFLCGLKPWRES*RGPAPWEIKEL Trigger: GAGTTCCTTGATCTCCCAGGGTGCTGGGCCCCGTCAGGATTCCCTCCAGGGCTTTAAGCCACACAGAAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CAA 90 bp | GGCCATGGAGTTCCAGAGCTGGACCCATGGCCACTAGGAGCCCTGCTGCCCTCTATGCTAGTCCCTTTCTaGTTTGGGAAGCAGTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GHGVPELDPWPLGALLPSMLVPF*FGKQFG Trigger: TCCAAACTGCTTCCCAAACAAGAAAGGGACTAGCAT...AGAGGGCAGCAGGGCTCCTAGTGGCCATGGGTCCAGCTCTGGAACTCCATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | AGACCTACAGGTCCCTGCATTTTACACCAGAGGCCATaGAGTTCCAGAGCTGGACCCATGGCCACTAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: RPTGPCILHQRP*SSRAGPMATRS Trigger: GCTCCTAGTGGCCATGGGTCCAGCTCTGGAACTCCATGGCCTCTGGTGTAAAATGCAGGGACCTGTAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | AGACAGAGGTACCGGGCACACTGTCTGCAGGCACTCTaGACACCATCCTCCCCACCTTTTGTGGTGGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: RQRYRAHCLQAL*TPSSPPFVVVL Trigger: TAACACCACCACAAAAGGTGGGGAGGATGGTGTCCAGAGTGCCTGCAGACAGTGTGCCCGGTACCTCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | CTCTCTTTGCCAGAATCACCAAAATACGCTTCCTGCTaGCCCAGGGCAGTGCTGTCCGTGTGTCTGTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LSLPESPKYASC*PRAVLSVCLSA Trigger: TGCAGACAGACACACGGACAGCACTGCCCTGGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | GGTAGGGTAGAGGAAGCTAGGCAGGCCCCATCTTACTaGCAGAGAAGGGGTGCTGTAGCCACACTATGTGTT | + |
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Preference number: 3 (lower is better) Translates to: GRVEEARQAPSY*QRRGAVATLCV Trigger: AACACATAGTGTGGCTACAGCACCCCTTCTCTGCCAGTAAGATGGGGCCTGCCTAGCTTCCTCTACCCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | CGTGGCATATTTCCTGGGGTTTCTGAACTCCTGGTTTaGGGTGGGATTGGACGTGGTGGTGTGTGCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RGIFPGVSELLV*GGIGRGGVCWQ Trigger: TTGCCAGCACACACCACCACGTCCAATCCCACCCCAAACCAGGAGTTCAGAAACCCCAGGAAATATGCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 72 bp | CAACTCTCTTTGCCAGAATCACCAAAATACGCTTCCTaGTGGCCCAGGGCAGTGCTGTCCGTGTGTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: QLSLPESPKYAS*WPRAVLSVCLS Trigger: AGACAGACACACGGACAGCACTGCCCTGGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAGAGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 72 bp | AAGGACTGGGAAGTGACGACACAGCACCAGATGATCTaGCACCAGCTGACACCATCCAACTCTCTTTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: KDWEVTTQHQMI*HQLTPSNSLCQ Trigger: CTGGCAAAGAGAGTTGGATGGTGTCAGCTGGTGGCAGATCATCTGGTGCTGTGTCGTCACTTCCCAGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | GAACACGTGGCATATTTCCTGGGGTTTCTGAACTCCTaGTTTGGGGTGGGATTGGACGTGGTGGTGTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: EHVAYFLGFLNS*FGVGLDVVVCA Trigger: AGCACACACCACCACGTCCAATCCCACCCCAAACCAGGAGTTCAGAAACCCCAGGAAATATGCCACGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | GAGAGGACAGTCCAAATTCAAGAACCGTTTTCTGTGTaGCTTAAAGCCCTGGAGGGAATCCTGACGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: ERTVQIQEPFSV*LKALEGILTGP Trigger: GGGCCCCGTCAGGATTCCCTCCAGGGCTTTAAGCCACACAGAAAACGGTTCTTGAATTTGGACTGTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CAA 90 bp | CATAAAATGGTTGCTGACGCAGCTCACCCTCTCCCTCAGGTTATGCTGAGTGATTGGTTTGGGGTGGGATaGGACGTGGTGGTGTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: HKMVADAAHPLPQVMLSDWFGVG*DVVVCA Trigger: AGCACACACCACCACGTCCAATCCCACCCCAAACCA...ATCACTCAGCATAACCTGAGGGAGAGGGTGAGCTGCGTCAGCAACCATTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR TCA 72 bp | AGCATGATGAACACGTGGCATATTTCCTGGGGTTTCTaGACTCCTGGTTTGGGGTGGGATTGGACGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SMMNTWHISWGF*TPGLGWDWTWW Trigger: CCACCACGTCCAATCCCACCCCAAACCAGGAGTTCAGAAACCCCAGGAAATATGCCACGTGTTCATCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 72 bp | TGTGTTCTTCTGAGGAAGTGTGTGGGAGCTTCCAGATaGGGAACTACAGAGGTTGGGTCACAAGCACTCACC | + |
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Preference number: 3 (lower is better) Translates to: CVLLRKCVGASR*GTTEVGSQALT Trigger: GGTGAGTGCTTGTGACCCAACCTCTGTAGTTCCGCATCTGGAAGCTCCCACACACTTCCTCAGAAGAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | TGGGGTGGAGGGAGGAGGATGTGCATATATATCATGTaGGTGAGAGAACACAGGGCTGGAGGGAAAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: WGGGRRMCIYIM*VREHRAGGKDA Trigger: TGCATCTTTCCCTCCAGCCCTGTGTTCTCTCACCCACATGATATATATGCACATCCTCCTCCCTCCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR CCA 72 bp | GGCCCAGCACCCTGGGAGATCAAGGAACTCAAACTCTaGCAGCTCCACAATTTTAAGGCAGCATTGCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GPAPWEIKELKL*QLHNFKAALLS Trigger: AGAGAGCAATGCTGCCTTAAAATTGTGGAGCTGCCAGAGTTTGAGTTCCTTGATCTCCCAGGGTGCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CAA 90 bp | GCACTCTGGACACCATCCTCCCCACCTTTTGTGGTGGTGTTAAGTTCAAACCCGACCATCCAACTCTCTTaGCCAGAATCACCAAAATAC | + |
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Preference number: 3 (lower is better) Translates to: ALWTPSSPPFVVVLSSNPTIQLS*PESPKY Trigger: GTATTTTGGTGATTCTGGCAAAGAGAGTTGGATGGT...CGGGTTTGAACTTAACACCACCACAAAAGGTGGGGAGGATGGTGTCCAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGAATCAACACACTTTACAGACTTTAAGGCCGCAACAAGTCCTAGATGCTCTCAAGCACTCACCTGTTaGAGCAATGACCACAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: GESTHFTDFKAATSPRCSQALTC*SNDHSG Trigger: GCCACTGTGGTCATTGCTCAAACAGGTGAGTGCTTG...AGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGTAAAGTGTGTTGATTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR GCA 72 bp | CACTTTACAGACTTTAAGGCCGCAACAAGTCCTAGATaGTCTTTGCAGACATCGCCATTCCCTGTTACCACA | + |
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Preference number: 3 (lower is better) Translates to: HFTDFKAATSPR*SLQTSPFPVTT Trigger: TGTGGTAACAGGGAATGGCGATGTCTGCAAAGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGTAAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| 3UTR TCA 72 bp | CCCTTTGGTCACGGCCAAAGCCTTTCTTCCACATTTTaGGAGGACAGTCCAAATTCAAGAACCGTTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PFGHGQSLSSTF*EDSPNSRTVFC Trigger: ACAGAAAACGGTTCTTGAATTTGGACTGTCCTCTCAAAATGTGGAAGAAAGGCTTTGGCCGTGACCAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAATCAACACACTTTACAGACTTTAAGGCCGCAACAAGTCCTAGATGCTCTCCTTTCTTCCACATTTaGAGAGGACAGTCCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: GESTHFTDFKAATSPRCSPFFHI*RGQSKF Trigger: GAATTTGGACTGTCCTCTCAAAATGTGGAAGAAAGG...AGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGTAAAGTGTGTTGATTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | AGACAGAGGTACCGGGCACACTGTCTGCAGGCACTCTGGACACCATCCTCCCCACAGGCAGTGGCGCAGTaGCACCCGCCGGCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQRYRAHCLQALWTPSSPQAVAQ*HPPAEG Trigger: GCCCTCTGCCGGCGGGTGGCACTGCGCCACTGCCTG...TGGGGAGGATGGTGTCCAGAGTGCCTGCAGACAGTGTGCCCGGTACCTCTGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| 3UTR CAA 72 bp | TGCTGGCAATGTGGCCAGGGATCTGCAGGCAACCGTTaGGAATCCCCACTCCCAGTGGGCAGCCCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CWQCGQGSAGNR*ESPLPVGSPGQ Trigger: CTGGCCTGGGCTGCCCACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCTGGACACCATCCTCCCCACCTTTTGTGGTGGTGTTAAGTTCAAACCCGATCAGGGCCAGGCAGTaGCGCAGTGCCACCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWTPSSPPFVVVLSSNPIRARQ*RSATRR Trigger: CCGGCGGGTGGCACTGCGCCACTGCCTGGCCCTGAT...CGGGTTTGAACTTAACACCACCACAAAAGGTGGGGAGGATGGTGTCCAGAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTACCGGGCACACTGTCTGCAGGCACTCTGGACACCATCCTCCCCACCTGAAGAACAGTTTCCTTaGGCTCCTGCGGTCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRYRAHCLQALWTPSSPPEEQFP*APAVCV Trigger: GACGCAGACCGCAGGAGCTCAAGGAAACTGTTCTTC...AGGTGGGGAGGATGGTGTCCAGAGTGCCTGCAGACAGTGTGCCCGGTACCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | GGCCATGGAGTTCCAGAGCTGGACCCATGGCCACTAGGAGCCCTGCTGCCCTCTGCAGGTGCCACAGGCTaGAGAAGAACAGTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHGVPELDPWPLGALLPSAGATG*RRTVSL Trigger: CAAGGAAACTGTTCTTCTGCAGCCTGTGGCACCTGC...AGAGGGCAGCAGGGCTCCTAGTGGCCATGGGTCCAGCTCTGGAACTCCATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGGGAGCTTCCAGATGCGGAACTACAGAGGTTGGGTCACAAGCACTCACGGGACAGAGGCCGACTaGGTGCTGGGAAAGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCGSFQMRNYRGWVTSTHGTEAD*VLGKTA Trigger: TGCCGTCTTTCCCAGCACCCAGTCGGCCTCTGTCCC...GTGAGTGCTTGTGACCCAACCTCTGTAGTTCCGCATCTGGAAGCTCCCACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | AATACGCTTCCTGCTGGCCCAGGGCAGTGCTGTCCGTGTGTCTGTCTGCAGGTGGCACAGCACAGCAGGTaGCAAAAGACACGGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTLPAGPGQCCPCVCLQVAQHSR*QKTRLA Trigger: TGCTAGCCGTGTCTTTTGCCACCTGCTGTGCTGTGC...CACCTGCAGACAGACACACGGACAGCACTGCCCTGGGCCAGCAGGAAGCGTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTTGCAGACATCGCCATTCCCTGTTACCACAGGACACAGCCAGGCGGTAACCAGAAGGGCCACTCCTaGCACAGCACAGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFADIAIPCYHRTQPGGNQKGHS*HSTAGG Trigger: GCCACCTGCTGTGCTGTGCCAGGAGTGGCCCTTCTG...GTTACCGCCTGGCTGTGTCCTGTGGTAACAGGGAATGGCGATGTCTGCAAAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTACCGGGCACACTGTCTGCAGGCACTCTGGACACCATCCTCCCCACCTCTCAGGGCATTGAAGTaGGGGAATTGCCAGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QRYRAHCLQALWTPSSPPLRALK*GNCQEY Trigger: GTACTCCTGGCAATTCCCCCACTTCAATGCCCTGAG...AGGTGGGGAGGATGGTGTCCAGAGTGCCTGCAGACAGTGTGCCCGGTACCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGGGAGCTTCCAGATGCGGAACTACAGAGGTTGGGTCACAAGCACTCACAGGAGCAGCGGCAGGTaGCACAGGCTGCAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCGSFQMRNYRGWVTSTHRSSGR*HRLQKN Trigger: GTTCTTCTGCAGCCTGTGGCACCTGCCGCTGCTCCT...GTGAGTGCTTGTGACCCAACCTCTGTAGTTCCGCATCTGGAAGCTCCCACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR TCA 90 bp | GCACTCTGGACACCATCCTCCCCACCTTTTGTGGTGGTGTTAAGTTCAAACCCGCCCAGCTCAGGGCATTaGAGTGGGGGAATTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWTPSSPPFVVVLSSNPPSSGH*SGGIAR Trigger: CCTGGCAATTCCCCCACTTCAATGCCCTGAGCTGGG...CGGGTTTGAACTTAACACCACCACAAAAGGTGGGGAGGATGGTGTCCAGAGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR TCA 90 bp | CATAAAATGGTTGCTGACGCAGCTCACCCTCTCCCTCAGGTTATGCTGAGTGATGGAAGACCCAGGTGGTaGTGTCCAGGACCGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKMVADAAHPLPQVMLSDGRPRW*CPGPGQ Trigger: CTGCCCCGGTCCTGGACATCACCACCTGGGTCTTCC...ATCACTCAGCATAACCTGAGGGAGAGGGTGAGCTGCGTCAGCAACCATTTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | CACCCTCTCCCTCAGGTTATGCTGAGTGATGCCCTTCCAAAAGGAAATGCTGAGGTTGGCAGCACAGGATaGGAGGCCGGTTCCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPLPQVMLSDALPKGNAEVGSTG*EAGSKG Trigger: TCCCTTGGAACCGGCCTCGCATCCTGTGCTGCCAAC...CTCAGCATTTCCTTTTGGAAGGGCATCACTCAGCATAACCTGAGGGAGAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAATGTGGCCAGGGATCTGCAGGCAACCGTTTGGAATCCCCACTCCCAGTGTTGAAGTGGGGGAATTaGCAGGAGTACAGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WQCGQGSAGNRLESPLPVLKWGN*QEYRIP Trigger: AGGGATCCTGTACTCCTGGCAATTCCCCCACTTCAA...CACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCTGGACACCATCCTCCCCACCTTTTGTGGTGGTGTTAAGTTCAAACCCGGGGAATGGTCCACTATaGAGGTCGCCTCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALWTPSSPPFVVVLSSNPGNGPL*RSPPAP Trigger: TGGAGCTGGAGGCGACCTCCATAGTGGACCATTCCC...CGGGTTTGAACTTAACACCACCACAAAAGGTGGGGAGGATGGTGTCCAGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGGGAGCTTCCAGATGCGGAACTACAGAGGTTGGGTCACAAGCACTCACTGGCTAAGGCCCCTGTaGAGCTGTGTGACATACATG | + |
|
Preference number: 4 (lower is better) Translates to: VCGSFQMRNYRGWVTSTHWLRPL*SCVTYM Trigger: CATGTATGTCACACAGCTGCACAGGGGCCTTAGCCA...GTGAGTGCTTGTGACCCAACCTCTGTAGTTCCGCATCTGGAAGCTCCCACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAATCAACACACTTTACAGACTTTAAGGCCGCAACAAGTCCTAGATGCTCTCCCTTGTCCCCCTCCTaGCCGGGCCGCTGCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GESTHFTDFKAATSPRCSPLSPS*PGRCLQ Trigger: CTGTAAGCAGCGGCCCGGGCAGGAGGGGGACAAGGG...AGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGTAAAGTGTGTTGATTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| 3UTR CAA 72 bp | GATGATCTGCCACCAGCTGACACCATCCAACTCTCTTaGCCAGAATCACCAAAATACGCTTCCTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DDLPPADTIQLS*PESPKYASCWP Trigger: GGGCCAGCAGGAAGCGTATTTTGGTGATTCTGGCAAAGAGAGTTGGATGGTGTCAGCTGGTGGCAGATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR TCA 90 bp | CACCCTCTCCCTCAGGTTATGCTGAGTGATGCCCTTCCAAAAGGAAATGCTGAGCAGTGCAAAGCCTGCTaGAGTGGTGCTTACCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HPLPQVMLSDALPKGNAEQCKAC*SGAYHK Trigger: CTTGTGGTAAGCACCACTTCAGCAGGCTTTGCACTG...CTCAGCATTTCCTTTTGGAAGGGCATCACTCAGCATAACCTGAGGGAGAGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAATGTGGCCAGGGATCTGCAGGCAACCGTTTGGAATCCCCACTCCCAGTGTGTTCTATTCATGTTTaGGTCGAACGGCACCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WQCGQGSAGNRLESPLPVCSIHV*VERHLK Trigger: TTTGAGGTGCCGTTCGACTCAAACATGAATAGAACA...CACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAATCAACACACTTTACAGACTTTAAGGCCGCAACAAGTCCTAGATGCTCTCAGAGGCCGACTGGGTaGTGGGAAAGACGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GESTHFTDFKAATSPRCSQRPTG*WERRQL Trigger: GAGCTGCCGTCTTTCCCAGCACCCAGTCGGCCTCTG...AGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGTAAAGTGTGTTGATTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGGGAGCTTCCAGATGCGGAACTACAGAGGTTGGGTCACAAGCACTCACGCTGACCCTCTTCAGTaGTGTGTAACAACAGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: VCGSFQMRNYRGWVTSTHADPLQ*CVTTGI Trigger: TATACCTGTTGTTACACACCACTGAAGAGGGTCAGC...GTGAGTGCTTGTGACCCAACCTCTGTAGTTCCGCATCTGGAAGCTCCCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR GCA 90 bp | CATAAAATGGTTGCTGACGCAGCTCACCCTCTCCCTCAGGTTATGCTGAGTGATACAGCCTGGCCAAAATaGCAGGCAGATCATCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKMVADAAHPLPQVMLSDTAWPK*QADHQC Trigger: ACACTGATGATCTGCCTGGCATTTTGGCCAGGCTGT...ATCACTCAGCATAACCTGAGGGAGAGGGTGAGCTGCGTCAGCAACCATTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAATCAACACACTTTACAGACTTTAAGGCCGCAACAAGTCCTAGATGCTCTCAAGGCCCCTGTGAGTaGATTCACTCCCCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GESTHFTDFKAATSPRCSQGPCE*IHSPGQ Trigger: CTGACCTGGGGAGTGAATCCACTCACAGGGGCCTTG...AGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGTAAAGTGTGTTGATTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| 3UTR CAA 72 bp | ACAGACTTTAAGGCCGCAACAAGTCCTAGATGCTCTTaGCAGACATCGCCATTCCCTGTTACCACAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TDFKAATSPRCS*QTSPFPVTTGH Trigger: GTGTCCTGTGGTAACAGGGAATGGCGATGTCTGCAAAGAGCATCTAGGACTTGTTGCGGCCTTAAAGTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CCA 90 bp | TTTAACTGTTTTATTGCAGCAGGAGGAGAATCAACACACTTTACAGACTTTAAGGAAAGGAGACGCCGGTaGCTCTGGCTTTGGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FNCFIAAGGESTHFTDFKERRRR*LWLWFD Trigger: GTCAAACCAAAGCCAGAGCCACCGGCGTCTCCTTTC...CTTAAAGTCTGTAAAGTGTGTTGATTCTCCTCCTGCTGCAATAAAACAGTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS GCA 90 bp | CGGGGCAGCAGTCGACAGAGCAATCAGGGCCAGGCAGTGGCGCAGTaGCACCCGCCGGCAGAGGGCTGGATGGGTGACGGACATCATACA | + |
|
Preference number: 5 (lower is better) Translates to: RGSSRQSNQGQAVAQ*HPPAEGWMGDGHHT Trigger: TGTATGATGTCCGTCACCCATCCAGCCCTCTGCCGGCGGGTGGCACTGCGCCACTGCCTGGCCCTGATTGCTCTGTCGACTGCTGCCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAATGTGGCCAGGGATCTGCAGGCAACCGTTTGGAATCCCCACTCCCAGTGCTCGGAGCCTCTCCCTaGTCCCCCTCCTGCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WQCGQGSAGNRLESPLPVLGASP*SPSCPG Trigger: GCCCGGGCAGGAGGGGGACAAGGGAGAGGCTCCGAG...CACTGGGAGTGGGGATTCCAAACGGTTGCCTGCAGATCCCTGGCCACATTGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS TCA 90 bp | CCAGGCAGTGGCGCAGTGCCACCCGCCGGCAGAGGGCTGGATGGGTaGCGGACATCATACAGTAGCCTCCTCGGGAGTAGTCTTCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGSGAVPPAGRGLDG*RTSYSSLLGSSLHG Trigger: TCCGTGAAGACTACTCCCGAGGAGGCTACTGTATGATGTCCGTCACCCATCCAGCCCTCTGCCGGCGGGTGGCACTGCGCCACTGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS CCA 90 bp | AATCAGGGCCAGGCAGTGGCGCAGTGCCACCCGCCGGCAGAGGGCTaGATGGGTGACGGACATCATACAGTAGCCTCCTCGGGAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NQGQAVAQCHPPAEG*MGDGHHTVASSGVV Trigger: GACTACTCCCGAGGAGGCTACTGTATGATGTCCGTCACCCATCCAGCCCTCTGCCGGCGGGTGGCACTGCGCCACTGCCTGGCCCTGATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS TCA 90 bp | CAGGAGCAGCGGCAGGTGCCACAGGCTGCAGAAGAACAGTTTCCTTaGGCTCCTGCGGTCTGCGTCCACGTAGAAGCGGAAGCCGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QEQRQVPQAAEEQFP*APAVCVHVEAEAEV Trigger: TACCTCGGCTTCCGCTTCTACGTGGACGCAGACCGCAGGAGCTCAAGGAAACTGTTCTTCTGCAGCCTGTGGCACCTGCCGCTGCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS GCA 90 bp | CTGGGTGCTGGGAAAGACGGCAGCTCATCCTCGTCCGCTCTAGCCTaGCCTGAAGACGTGTGTTCAAGGAAAGGAGACGCCGGTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGAGKDGSSSSSALA*PEDVCSRKGDAGGS Trigger: AGAGCCACCGGCGTCTCCTTTCCTTGAACACACGTCTTCAGGGCAGGCTAGAGCGGACGAGGATGAGCTGCCGTCTTTCCCAGCACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS TCA 90 bp | TGCTGGGAAAGACGGCAGCTCATCCTCGTCCGCTCTAGCCTGCCCTaGAGACGTGTGTTCAAGGAAAGGAGACGCCGGTGGCTCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CWERRQLILVRSSLP*RRVFKERRRRWLWL Trigger: AAGCCAGAGCCACCGGCGTCTCCTTTCCTTGAACACACGTCTTCAGGGCAGGCTAGAGCGGACGAGGATGAGCTGCCGTCTTTCCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS TCA 90 bp | AGCCTCCTCGGGAGTAGTCTTCACGGAGGCCCCAGCTCAGGGCATTaGAGTGGGGGAATTGCCAGGAGTACAGGATCCCTCCCAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSSLHGGPSSGH*SGGIARSTGSLPEE Trigger: TTCTTCTGGGAGGGATCCTGTACTCCTGGCAATTCCCCCACTTCAATGCCCTGAGCTGGGGCCTCCGTGAAGACTACTCCCGAGGAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS GCA 90 bp | GCGGCAGGTGCCACAGGCTGCAGAAGAACAGTTTCCTTGAGCTCCTaGGGTCTGCGTCCACGTAGAAGCGGAAGCCGAGGTAGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGATGCRRTVSLSS*GLRPRRSGSRGRKC Trigger: ACATTTCCTACCTCGGCTTCCGCTTCTACGTGGACGCAGACCGCAGGAGCTCAAGGAAACTGTTCTTCTGCAGCCTGTGGCACCTGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CAA 90 bp | GGCCATGGAGTTCCAGAGCTGGACCCATGGCCACTAGGAGCCCTGCTGCCCTCTTCTTCCTTTTTCTCTTaGGCTGTGTCGAGGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GHGVPELDPWPLGALLPSSSFFS*AVSREW Trigger: CCATTCCCTCGACACAGCCAAAGAGAAAAAGGAAGA...AGAGGGCAGCAGGGCTCCTAGTGGCCATGGGTCCAGCTCTGGAACTCCATGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CAA 90 bp | GGCCATGGAGTTCCAGAGCTGGACCCATGGCCACTAGGAGCCCTGCTGCCCTCTTTGTTCTATTCATGTTaGAGTCGAACGGCACCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GHGVPELDPWPLGALLPSLFYSC*SRTAPQ Trigger: TTGAGGTGCCGTTCGACTCAAACATGAATAGAACAA...AGAGGGCAGCAGGGCTCCTAGTGGCCATGGGTCCAGCTCTGGAACTCCATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CAA 90 bp | ATATATCATGTGGGTGAGAGAACACAGGGCTGGAGGGAAAGATGCATAAAGACTGCTGTGAGTTTGATCTaGGACAGCCTGGCCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: IYHVGERTQGWRERCIKTAVSLI*DSLAKM Trigger: CATTTTGGCCAGGCTGTCCAAGATCAAACTCACAGC...AGTCTTTATGCATCTTTCCCTCCAGCCCTGTGTTCTCTCACCCACATGATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGTTTTATTGCAGCAGGAGGAGAATCAACACACTTTACAGACTTTAAGAGAAGAACAGTTTCCTaGAGCTCCTGCGGTCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FNCFIAAGGESTHFTDFKRRTVS*SSCGLR Trigger: ACGCAGACCGCAGGAGCTCAAGGAAACTGTTCTTCT...CTTAAAGTCTGTAAAGTGTGTTGATTCTCCTCCTGCTGCAATAAAACAGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS CCA 72 bp | CAGGCAGTGGCGCAGTGCCACCCGCCGGCAGAGGGCTaGATGGGTGACGGACATCATACAGTAGCCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QAVAQCHPPAEG*MGDGHHTVASS Trigger: CGAGGAGGCTACTGTATGATGTCCGTCACCCATCCAGCCCTCTGCCGGCGGGTGGCACTGCGCCACTGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS CAA 90 bp | GCAGGAGCAGCGGCAGGTGCCACAGGCTGCAGAAGAACAGTTTCCTaGAGCTCCTGCGGTCTGCGTCCACGTAGAAGCGGAAGCCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGAAAGATGCRRTVS*SSCGLRPRRSGSRG Trigger: ACCTCGGCTTCCGCTTCTACGTGGACGCAGACCGCAGGAGCTCAAGGAAACTGTTCTTCTGCAGCCTGTGGCACCTGCCGCTGCTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS GCA 72 bp | CTCCTCATTTGGCTTCCGGGACAGAGGCCGACTGGGTaGTGGGAAAGACGGCAGCTCATCCTCGTCCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLIWLPGQRPTG*WERRQLILVRS Trigger: AGAGCGGACGAGGATGAGCTGCCGTCTTTCCCAGCACCCAGTCGGCCTCTGTCCCGGAAGCCAAATGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS TCA 72 bp | CGGCAGGTGCCACAGGCTGCAGAAGAACAGTTTCCTTaGGCTCCTGCGGTCTGCGTCCACGTAGAAGCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RQVPQAAEEQFP*APAVCVHVEAE Trigger: TTCCGCTTCTACGTGGACGCAGACCGCAGGAGCTCAAGGAAACTGTTCTTCTGCAGCCTGTGGCACCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS GCA 72 bp | GGGAAAGACGGCAGCTCATCCTCGTCCGCTCTAGCCTaGCCTGAAGACGTGTGTTCAAGGAAAGGAGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: GKDGSSSSSALA*PEDVCSRKGDA Trigger: GGCGTCTCCTTTCCTTGAACACACGTCTTCAGGGCAGGCTAGAGCGGACGAGGATGAGCTGCCGTCTTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
||
| CDS GCA 72 bp | GCCACAGGCTGCAGAAGAACAGTTTCCTTGAGCTCCTaGGGTCTGCGTCCACGTAGAAGCGGAAGCCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ATGCRRTVSLSS*GLRPRRSGSRG Trigger: ACCTCGGCTTCCGCTTCTACGTGGACGCAGACCGCAGGAGCTCAAGGAAACTGTTCTTCTGCAGCCTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| CDS CAA 72 bp | TCAAGGAAAGGAGACGCCGGTGGCTCTGGCTTTGGTTaGACTCGCTGGCTAAGGCCCCTGTGCAGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SRKGDAGGSGFG*TRWLRPLCSCV Trigger: CACACAGCTGCACAGGGGCCTTAGCCAGCGAGTCAAACCAAAGCCAGAGCCACCGGCGTCTCCTTTCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| CDS CCA 72 bp | AGACGTGTGTTCAAGGAAAGGAGACGCCGGTGGCTCTaGCTTTGGTTTGACTCGCTGGCTAAGGCCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RRVFKERRRRWL*LWFDSLAKAPV Trigger: CACAGGGGCCTTAGCCAGCGAGTCAAACCAAAGCCAGAGCCACCGGCGTCTCCTTTCCTTGAACACACGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| CDS TCA 72 bp | CCAGTCGAAAGGGCCTGGAGCCAGTGCAAAGCCTGCTaGAGTGGTGCTTACCACAAGAGCTGTGAGTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: PVERAWSQCKAC*SGAYHKSCEFD Trigger: ATCAAACTCACAGCTCTTGTGGTAAGCACCACTTCAGCAGGCTTTGCACTGGCTCCAGGCCCTTTCGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| CDS CCA 72 bp | CTTTCTTCCTTTTTCTCTTTGGCTGTGTCGAGGGAATaGTCCACTATGGAGGTCGCCTCCAGCTCCACCAAC | + |
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Preference number: 6 (lower is better) Translates to: LSSFFSLAVSRE*STMEVASSSTN Trigger: GTTGGTGGAGCTGGAGGCGACCTCCATAGTGGACCATTCCCTCGACACAGCCAAAGAGAAAAAGGAAGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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| CDS CAA 72 bp | GAAGTGGTGCTTACCACAAGAGCTGTGAGTTTGATCTaGGACAGCCTGGCCAAAATGCCAGGCAGATCATCA | + |
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Preference number: 6 (lower is better) Translates to: EVVLTTRAVSLI*DSLAKMPGRSS Trigger: TGATGATCTGCCTGGCATTTTGGCCAGGCTGTCCAAGATCAAACTCACAGCTCTTGTGGTAAGCACCACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049091.9 |
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