Pregenerated sensors for CORO6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020836Ensembl transcript IDs: ENSMUST00000021190.9, ENSMUST00000052515.12, ENSMUST00000079770.3, ENSMUST00000102493.8, ENSMUST00000108391.9
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTaGCCCATTGAGTCTGCAGTGTGCAGAGCTTTGCAGCGCGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: CRVPDQKPVLPVGAP*PIESAVCRALQRVG Trigger: GCCTACGCGCTGCAAAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| 3UTR CCA 90 bp | AGGTGCCCCCTAGTTTGGGCAAGGCCTGGTTCCCTCATGGTGCCTTaGGGAATGGGGGCAGCATATTGGCTTTCTGTGCAGGAGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: RCPLVWARPGSLMVP*GMGAAYWLSVQEAQ Trigger: CTGTGCCTCCTGCACAGAAAGCCAATATGCTGCCCCCATTCCCCAAGGCACCATGAGGGAACCAGGCCTTGCCCAAACTAGGGGGCACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR TCA 90 bp | GGTGGGAGGTGGGTGGGGTCTTGGGAACCTCAATGCAAAGATGGATaGCCTGGGATAAAAAGCTGCCTGATGGGTCCTCAGTCCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GGRWVGSWEPQCKDG*PGIKSCLMGPQSSL Trigger: CAAGCTGGACTGAGGACCCATCAGGCAGCTTTTTATCCCAGGTCATCCATCTTTGCATTGAGGTTCCCAAGACCCCACCCACCTCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CCA 90 bp | GAGGTGGGTGGGGTCTTGGGAACCTCAATGCAAAGATGGATGACCTaGGATAAAAAGCTGCCTGATGGGTCCTCAGTCCAGCTTGCATTT | + |
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Preference number: 1 (lower is better) Translates to: EVGGVLGTSMQRWMT*DKKLPDGSSVQLAF Trigger: AAATGCAAGCTGGACTGAGGACCCATCAGGCAGCTTTTTATCCCAGGTCATCCATCTTTGCATTGAGGTTCCCAAGACCCCACCCACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CCA 90 bp | GGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATaGGAAGAGCCCTCTGCCATAGAATTATGGTTGAAGCCAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GLFVSKKLPSLEVRR*EEPSAIELWLKPVG Trigger: ACCCACTGGCTTCAACCATAATTCTATGGCAGAGGGCTCTTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCAAGGCCTGGTTCCCTCATGGTGCCTTGGGGAATGGGGGCAGCATATTGCTGAGATTTCTCTGGTaGGGTCTGTTTGTCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LGKAWFPHGALGNGGSILLRFLW*GLFVSK Trigger: CTTGGAGACAAACAGACCCCACCAGAGAAATCTCAG...CAATATGCTGCCCCCATTCCCCAAGGCACCATGAGGGAACCAGGCCTTGCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CAA 90 bp | AAGGCCTGGTTCCCTCATGGTGCCTTGGGGAATGGGGGCAGCATATaGGCTTTCTGTGCAGGAGGCACAGACTTGTACTTAGTGAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: KAWFPHGALGNGGSI*AFCAGGTDLYLVKY Trigger: ATACTTCACTAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATATGCTGCCCCCATTCCCCAAGGCACCATGAGGGAACCAGGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGAAGTGAGAAGATGGGAAGAGCCCTCTGCCATAGAATTATGGTTGAAGCCCCCCACGAGGCAGGGTaGAGAGTTCCAGACCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: FGSEKMGRALCHRIMVEAPHEAG*RVPDQK Trigger: CTTTTGGTCTGGAACTCTGCACCCTGCCTCGTGGGG...GGCTTCAACCATAATTCTATGGCAGAGGGCTCTTCCCATCTTCTCACTTCCAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CAA 90 bp | AGATTTCTCTGGTGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTaGGAAGTGAGAAGATGGGAAGAGCCCTCTGCCATAGAATTATGG | + |
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Preference number: 2 (lower is better) Translates to: RFLWWGLFVSKKLPS*EVRRWEEPSAIELW Trigger: CCATAATTCTATGGCAGAGGGCTCTTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCACCAGAGAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CAA 90 bp | ATTAGGAGAAATATTGGAAATTTCCTGAGGTTCTGGGGATATCTGTaGAATCGCCATTCCTGTGAGGTCAGGCCTAGGCCCCTCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: IRRNIGNFLRFWGYL*NRHSCEVRPRPLSI Trigger: GATGCTGAGGGGCCTAGGCCTGACCTCACAGGAATGGCGATTCAACAGATATCCCCAGAACCTCAGGAAATTTCCAATATTTCTCCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CAA 90 bp | GGGAATGGGGGCAGCATATTGGCTTTCTGTGCAGGAGGCACAGACTaGTACTTAGTGAAGTATTTCATTAGTAATGCCTCAGTGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: GNGGSILAFCAGGTD*YLVKYFISNASVFL Trigger: TAGAAACACTGAGGCATTACTAATGAAATACTTCACTAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATATGCTGCCCCCATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR TCA 72 bp | AAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTaGGTCTGCAGTGTGCAGAGCTTTGCAGCGCGTAGG | + |
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Preference number: 3 (lower is better) Translates to: KAGAASRCALPH*VCSVQSFAARR Trigger: CCTACGCGCTGCAAAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| 3UTR GCA 72 bp | AGGCAGGGTGCAGAGTTCCAGACCAAAAGCCGGTGCTaGCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: RQGAEFQTKSRC*QSVRPAPLSLQ Trigger: CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCACCCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR GCA 72 bp | ACGAGGCAGGGTGCAGAGTTCCAGACCAAAAGCCGGTaGTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: TRQGAEFQTKSR*CQSVRPAPLSL Trigger: CAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCACCCTGCCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR GCA 72 bp | CCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTaGCCCATTGAGTCTGCAGTGTGCAGAGCTTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PDQKPVLPVGAP*PIESAVCRALQ Trigger: CTGCAAAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| 3UTR CCA 72 bp | GGGCAAGGCCTGGTTCCCTCATGGTGCCTTGGGGAATaGGGGCAGCATATTGGCTTTCTGTGCAGGAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GQGLVPSWCLGE*GQHIGFLCRRH Trigger: GTGCCTCCTGCACAGAAAGCCAATATGCTGCCCCCATTCCCCAAGGCACCATGAGGGAACCAGGCCTTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATGGGAAGTGCGCCCTGCCCCATaGAGTCTGCAGTGTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WGLFVSKKLPSLEVRRWEVRPAP*SLQCAE Trigger: CTCTGCACACTGCAGACTCAATGGGGCAGGGCGCAC...TTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR TCA 72 bp | TGGGTGGGGTCTTGGGAACCTCAATGCAAAGATGGATaGCCTGGGATAAAAAGCTGCCTGATGGGTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: WVGSWEPQCKDG*PGIKSCLMGPQ Trigger: CTGAGGACCCATCAGGCAGCTTTTTATCCCAGGTCATCCATCTTTGCATTGAGGTTCCCAAGACCCCACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR GCA 72 bp | TGCAATGTTTGGGGACCTAGTACGGAGCTCAGTCCCTaGCACTTAAGATCTGTGTGTTCAGGCCTCTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: CNVWGPSTELSP*HLRSVCSGLLW Trigger: CCACAAGAGGCCTGAACACACAGATCTTAAGTGGCAGGGACTGAGCTCCGTACTAGGTCCCCAAACATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CCA 72 bp | TGCTTCCGTGTGCCTGTTCTCCTGAGATTTCTCTGGTaGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: CFRVPVLLRFLW*GLFVSKKLPSL Trigger: CAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCACCAGAGAAATCTCAGGAGAACAGGCACACGGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CCA 72 bp | GGGGTCTTGGGAACCTCAATGCAAAGATGGATGACCTaGGATAAAAAGCTGCCTGATGGGTCCTCAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVLGTSMQRWMT*DKKLPDGSSVQ Trigger: CTGGACTGAGGACCCATCAGGCAGCTTTTTATCCCAGGTCATCCATCTTTGCATTGAGGTTCCCAAGACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR TCA 72 bp | GTGTGTGTTGAACCTGCTTCCGTGTGCCTGTTCTCCTaGGATTTCTCTGGTGGGGTCTGTTTGTCTCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: VCVEPASVCLFS*DFSGGVCLSPR Trigger: TCTTGGAGACAAACAGACCCCACCAGAGAAATCTCAGGAGAACAGGCACACGGAAGCAGGTTCAACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTTGAACCTGCTTCCGTGTGCCTGTTCTCCTGAGATTTCTAAGAAGCTGCCGTCTTaGGAAGTGAGAAGATGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVLNLLPCACSPEISKKLPS*EVRRWE Trigger: TTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTT...AGAAATCTCAGGAGAACAGGCACACGGAAGCAGGTTCAACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR GCA 72 bp | TGCCTTGGGGAATGGGGGCAGCATATTGGCTTTCTGTaGAGGAGGCACAGACTTGTACTTAGTGAAGTATTT | + |
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Preference number: 3 (lower is better) Translates to: CLGEWGQHIGFL*RRHRLVLSEVF Trigger: AAATACTTCACTAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATATGCTGCCCCCATTCCCCAAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CCA 72 bp | GTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATaGGAAGAGCCCTCTGCCATAGAATTATGGTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: VSKKLPSLEVRR*EEPSAIELWLK Trigger: CTTCAACCATAATTCTATGGCAGAGGGCTCTTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| 3UTR CCA 72 bp | CTTATTAGGAGAAATATTGGAAATTTCCTGAGGTTCTaGGGATATCTGTTGAATCGCCATTCCTGTGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LIRRNIGNFLRF*GYLLNRHSCEV Trigger: GACCTCACAGGAATGGCGATTCAACAGATATCCCCAGAACCTCAGGAAATTTCCAATATTTCTCCTAATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
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| CDS-3UTR CCA 90 bp | CAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCACAAGGGGGCCTCGCTaGCGGACTGGCTGCGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: QKPVLPVGAPCPIESAVCTRGPR*RTGCAE Trigger: CTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGT...GCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR CCA 90 bp | CGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTACAAGGGGGCCTCGCTaGCGGACTGGCTGCGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RCCQSVRPAPLSLQCAELTRGPR*RTGCAE Trigger: CTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGT...AAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR CCA 90 bp | TTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGACAAGGGGGCCTCGCTaGCGGACTGGCTGCGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: FQTKSRCCQSVRPAPLSLTRGPR*RTGCAE Trigger: CTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGT...CAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | AGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCCAGAGGCAGGACAATaGAGGCACCTCCACCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SRCCQSVRPAPLSLQCAEPEAGQ*RHLHLQ Trigger: CTGGAGGTGGAGGTGCCTTCATTGTCCTGCCTCTGG...CTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | CCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTCCCCGCTTGGGCATaGAACCCATACCCCGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: PDQKPVLPVGAPCPIESAVPAWA*NPYPVA Trigger: CGCAACGGGGTATGGGTTTCATGCCCAAGCGGGGAC...TGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGGTCCCCGCTTGGGCATaGAACCCATACCCCGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQVPAWA*NPYPVA Trigger: CGCAACGGGGTATGGGTTTCATGCCCAAGCGGGGAC...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | CCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCATATGACCCAGCCGCGTaGAGACAGCCCGCATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PDQKPVLPVGAPCPIESAYDPAA*RQPAWV Trigger: GACCCATGCGGGCTGTCTTCACGCGGCTGGGTCATA...TGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR GCA 90 bp | GTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGTCTCCAGGGTGTGCTaGTGCGACAAGGGGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: VPDQKPVLPVGAPCPIESVSRVC*CDKGAS Trigger: CGAGGCCCCCTTGTCGCAGCAGCACACCCTGGAGAC...AGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052515.12 |
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| CDS-3UTR GCA 90 bp | CCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTAATGTCTCCAGGGTGTaGTGCTGCGACAAGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PVLPVGAPCPIESAVCRANVSRV*CCDKGA Trigger: GGCCCCCTTGTCGCAGCAGCACACCCTGGAGACATT...AGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052515.12 |
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| CDS-3UTR CCA 90 bp | AGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGAGGCCTAGCTCTCGCTaGCTCATGCGGGTGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: SRCCQSVRPAPLSLQCAERPSSR*LMRVNP Trigger: GGGATTCACCCGCATGAGCCAGCGAGAGCTAGGCCT...CTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | AGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGTATCACCCCCTGCACTaGGCAGGACATTCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SRCCQSVRPAPLSLQCAEYHPLH*AGHSWQ Trigger: CTGCCAGGAATGTCCTGCTCAGTGCAGGGGGTGATA...CTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | TGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGTCCCCGCTTGGGCATaGAACCCATACCCCGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: CRVPDQKPVLPVGAPCPIVPAWA*NPYPVA Trigger: CGCAACGGGGTATGGGTTTCATGCCCAAGCGGGGAC...AATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR GCA 90 bp | CCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTGGCCTGGTCAGCCTTTaGTGCCTGACCAAACACGTG | + |
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Preference number: 4 (lower is better) Translates to: PVLPVGAPCPIESAVCRAGLVSL*CLTKHV Trigger: CACGTGTTTGGTCAGGCAGCAAAGGCTGACCAGGCC...AGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR GCA 90 bp | CGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTCATCCCCTCGTGGGCTaGAAACCTCTCCGCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: RCCQSVRPAPLSLQCAELHPLVG*KPLRNH Trigger: GTGGTTGCGGAGAGGTTTGCAGCCCACGAGGGGATG...AAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR CCA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGGGTCTCATCCCCTCGTaGGCTGCAAACCTCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQGLIPS*AANLSA Trigger: TGCGGAGAGGTTTGCAGCCCACGAGGGGATGAGACC...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGGGTCTCATCCCCTCGTaGGCTGCAAACCTCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: AEFQTKSRCCQSVRPAPLGLIPS*AANLSA Trigger: TGCGGAGAGGTTTGCAGCCCACGAGGGGATGAGACC...CAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | AGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGGACTGTGGTGTCATCTaGGGCACTGGCGATGACGTT | + |
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Preference number: 4 (lower is better) Translates to: SRCCQSVRPAPLSLQCAEDCGVI*GTGDDV Trigger: AACGTCATCGCCAGTGCCTCAGATGACACCACAGTC...CTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR TCA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGCCCGTGGTGAAGATATaGCCCAGCCGCGTGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQPVVKI*PSRVKT Trigger: TGTCTTCACGCGGCTGGGTCATATCTTCACCACGGG...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR GCA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATACACGTGGCGGAACTTaGTCTGCCGAACAACACGCC | + |
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Preference number: 4 (lower is better) Translates to: VQSSRPKAGAASRCALPHTRGGT*SAEQHA Trigger: GGCGTGTTGTTCGGCAGAGCAAGTTCCGCCACGTGT...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS-3UTR GCA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATGATGCCAAGACAGGATaGCCACACGCTTGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQSSRPKAGAASRCALPHDAKTG*PHAWSG Trigger: GCCACTCCAAGCGTGTGGGCATCCTGTCTTGGCATC...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCGCAAGGTCTTGTCCTTaGAGGTGGTGGCTAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKPVLPVGAPCPIESAVCARSCP*RWWLAG Trigger: GCCTGCTAGCCACCACCTGCAAGGACAAGACCTTGC...GCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | GAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCATCCCCTCGTGGGCTaGAAACCTCTCCGCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EFQTKSRCCQSVRPAPLSHPLVG*KPLRNH Trigger: GTGGTTGCGGAGAGGTTTGCAGCCCACGAGGGGATG...ACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCGGCCAGTGTGCCCAGTaGCCAGTGGGTAGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QKPVLPVGAPCPIESAVCGQCAQ*PVGSSY Trigger: ATAAGAACTACCCACTGGTCACTGGGCACACTGGCC...GCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGGGCCAGTGTGCCCAGTaGCCAGTGGGTAGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AEFQTKSRCCQSVRPAPLGQCAQ*PVGSSY Trigger: ATAAGAACTACCCACTGGTCACTGGGCACACTGGCC...CAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATGACTGTGGTGTCATCTaGGGCACTGGCGATGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQSSRPKAGAASRCALPHDCGVI*GTGDDV Trigger: AACGTCATCGCCAGTGCCTCAGATGACACCACAGTC...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCTCTTCCGGGGGTCAATaGTGCGCAAGGTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKPVLPVGAPCPIESAVCSSGGQ*CARSCP Trigger: AGGACAAGACCTTGCGCATCATTGACCCCCGGAAGA...GCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | AAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGATCTTCCGGGGGTCAATaGTGCGCAAGGTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVLPVGAPCPIESAVCRSSGGQ*CARSCP Trigger: AGGACAAGACCTTGCGCATCATTGACCCCCGGAAGA...TCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAACACGTGGCGGAACTTaGTCTGCCGAACAACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSRCCQSVRPAPLSLQCATRGGT*SAEQHA Trigger: GGCGTGTTGTTCGGCAGAGCAAGTTCCGCCACGTGT...TGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGACACGTGGCGGAACTTaGTCTGCCGAACAACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: FQTKSRCCQSVRPAPLSLTRGGT*SAEQHA Trigger: GGCGTGTTGTTCGGCAGAGCAAGTTCCGCCACGTGT...CAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTCTGGTCAGCCTTTGCTaGCTGACCAAACACGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPDQKPVLPVGAPCPIESLVSLC*LTKHVA Trigger: CGCCACGTGTTTGGTCAGGCAGCAAAGGCTGACCAG...AGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGGGCCTGGTCAGCCTTTaGTGCCTGACCAAACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVPDQKPVLPVGAPCPIEGLVSL*CLTKHV Trigger: CACGTGTTTGGTCAGGCAGCAAAGGCTGACCAGGCC...CTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | GAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTGGCCTGGTCAGCCTTTaGTGCCTGACCAAACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFQTKSRCCQSVRPAPLSGLVSL*CLTKHV Trigger: CACGTGTTTGGTCAGGCAGCAAAGGCTGACCAGGCC...ACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGGATGCCAAGACAGGATaGCCACACGCTTGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQTKSRCCQSVRPAPLSLDAKTG*PHAWSG Trigger: GCCACTCCAAGCGTGTGGGCATCCTGTCTTGGCATC...CAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | CCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTTCCTGGCAGTAGGATaGCAAGACAGGATGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PVLPVGAPCPIESAVCRAFLAVG*QDRMPT Trigger: TGTGGGCATCCTGTCTTGGCATCCTACTGCCAGGAA...AGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGCAAGGTCTTGTCCTTaGAGGTGGTGGCTAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRCCQSVRPAPLSLQCAARSCP*RWWLAG Trigger: GCCTGCTAGCCACCACCTGCAAGGACAAGACCTTGC...TGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGGCAAGGTCTTGTCCTTaGAGGTGGTGGCTAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQTKSRCCQSVRPAPLSLARSCP*RWWLAG Trigger: GCCTGCTAGCCACCACCTGCAAGGACAAGACCTTGC...CAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | AGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGGTGCCCAGTGACCAGTaGGTAGTTCTTATCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRCCQSVRPAPLSLQCAEVPSDQ*VVLIHS Trigger: CGAGTGGATAAGAACTACCCACTGGTCACTGGGCAC...CTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTGAAGCTCACGGTGTTTaGGGGGAACGTAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCCQSVRPAPLSLQCAELEAHGV*GERSLP Trigger: AGGAAGGCTACGTTCCCCCCAAACACCGTGAGCTTC...AAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGGAAGCTCACGGTGTTTaGGGGGAACGTAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQEAHGV*GERSLP Trigger: AGGAAGGCTACGTTCCCCCCAAACACCGTGAGCTTC...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATGAAGCTCACGGTGTTTaGGGGGAACGTAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSSRPKAGAASRCALPHEAHGV*GERSLP Trigger: AGGAAGGCTACGTTCCCCCCAAACACCGTGAGCTTC...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGGACTGTGGTGTCATCTaGGGCACTGGCGATGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVPDQKPVLPVGAPCPIEDCGVI*GTGDDV Trigger: AACGTCATCGCCAGTGCCTCAGATGACACCACAGTC...CTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCATCTTCCGGGGGTCAATaGTGCGCAAGGTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRCCQSVRPAPLSLQCASSGGQ*CARSCP Trigger: AGGACAAGACCTTGCGCATCATTGACCCCCGGAAGA...TGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | CCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCACGATTTCACATTTGCTaGCATCCAGTCCCCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDQKPVLPVGAPCPIESARFHIC*HPVPAW Trigger: CCAAGCGGGGACTGGATGTCAGCAAATGTGAAATCG...TGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCAACAGGTTCTGCATCCTaGCCTGATAGCCACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GAEFQTKSRCCQSVRPAPTGSAS*PDSHSS Trigger: TGATGAGTGGCTATCAGGTCAGGATGCAGAACCTGT...TGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTTCCTGGCAGTAGGATaGCAAGACAGGATGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VQSSRPKAGAASRCALPHFLAVG*QDRMPT Trigger: TGTGGGCATCCTGTCTTGGCATCCTACTGCCAGGAA...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | CCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTCTAGCAGGCTACCATTaGTGTTCCAACACACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLPVGAPCPIESAVCRALAGYH*CSNTRC Trigger: ACAGCGTGTGTTGGAACAGCAATGGTAGCCTGCTAG...AGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGGTGCCCAGTGACCAGTaGGTAGTTCTTATCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: AEFQTKSRCCQSVRPAPLVPSDQ*VVLIHS Trigger: CGAGTGGATAAGAACTACCCACTGGTCACTGGGCAC...CAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGCTAGAAATTTGGGGTTaGCGGCACAGAAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVPDQKPVLPVGAPCPIELEIWG*RHRRRC Trigger: ACAGCGCCTTCTGTGCCGTCAACCCCAAATTTCTAG...CTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | GAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTAGAAATTTGGGGTTaGCGGCACAGAAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFQTKSRCCQSVRPAPLSLEIWG*RHRRRC Trigger: ACAGCGCCTTCTGTGCCGTCAACCCCAAATTTCTAG...ACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | GAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCGATTTCACATTTGCTaGCATCCAGTCCCCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFQTKSRCCQSVRPAPLSRFHIC*HPVPAW Trigger: CCAAGCGGGGACTGGATGTCAGCAAATGTGAAATCG...ACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATACAGGTTCTGCATCCTaGCCTGATAGCCACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSSRPKAGAASRCALPHTGSAS*PDSHSS Trigger: TGATGAGTGGCTATCAGGTCAGGATGCAGAACCTGT...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | CCTCATGGTGCCTTGGGGAATGGGGGCAGCATATTGGCTTTCTGTGCAGGAGGCCTGGTCAGCCTTTGCTaGCTGACCAAACACGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHGALGNGGSILAFCAGGLVSLC*LTKHVA Trigger: CGCCACGTGTTTGGTCAGGCAGCAAAGGCTGACCAG...GCCTCCTGCACAGAAAGCCAATATGCTGCCCCCATTCCCCAAGGCACCATGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGTTCCTGGCAGTAGGATaGCAAGACAGGATGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FQTKSRCCQSVRPAPLSLFLAVG*QDRMPT Trigger: TGTGGGCATCCTGTCTTGGCATCCTACTGCCAGGAA...CAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGCACATTATCACCCCCTaGACTGAGCAGGACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQHIITP*TEQDIP Trigger: AGGAATGTCCTGCTCAGTGCAGGGGGTGATAATGTG...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | GACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGCTAGCAGGCTACCATTaGTGTTCCAACACACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQKPVLPVGAPCPIESAVLAGYH*CSNTRC Trigger: ACAGCGTGTGTTGGAACAGCAATGGTAGCCTGCTAG...CACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTGTGCCCAGTGACCAGTaGGTAGTTCTTATCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: EFQTKSRCCQSVRPAPLSVPSDQ*VVLIHS Trigger: CGAGTGGATAAGAACTACCCACTGGTCACTGGGCAC...ACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTACAGGGGTGTAGTCTaGAATCTGCCACACCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VQSSRPKAGAASRCALPHYRGVV*NLPHHD Trigger: GTCATGGTGTGGCAGATTCCAGACTACACCCCTGTA...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGGACTGAGGTGCCCCCTAGTTTGGGCAAGGCCTGGTTCCCTCATGGTGCCGGCCAGTGTGCCCAGTaGCCAGTGGGTAGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTEVPPSLGKAWFPHGAGQCAQ*PVGSSY Trigger: ATAAGAACTACCCACTGGTCACTGGGCACACTGGCC...GGCACCATGAGGGAACCAGGCCTTGCCCAAACTAGGGGGCACCTCAGTCCTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGCACATTATCACCCCCTaGACTGAGCAGGACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVPDQKPVLPVGAPCPIEHIITP*TEQDIP Trigger: AGGAATGTCCTGCTCAGTGCAGGGGGTGATAATGTG...CTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | GAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCACATTATCACCCCCTaGACTGAGCAGGACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EFQTKSRCCQSVRPAPLSHIITP*TEQDIP Trigger: AGGAATGTCCTGCTCAGTGCAGGGGGTGATAATGTG...ACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGTAGTAACACTCCGTTaGTTGTGTCCATCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVLPVGAPCPIESAVCRVVTLR*LCPSPA Trigger: TGCAGGAGATGGACACAAGCAACGGAGTGTTACTAC...TCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTTACAGGGGTGTAGTCTaGAATCTGCCACACCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EFQTKSRCCQSVRPAPLSYRGVV*NLPHHD Trigger: GTCATGGTGTGGCAGATTCCAGACTACACCCCTGTA...ACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGGTAGTAACACTCCGTTaGTTGTGTCCATCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVPDQKPVLPVGAPCPIEVVTLR*LCPSPA Trigger: TGCAGGAGATGGACACAAGCAACGGAGTGTTACTAC...CTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CCA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGACAAGTAGACGATGCTaGAGTCAGGATCGTAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQTSRRC*SQDRRM Trigger: CATTCTACGATCCTGACTCCAGCATCGTCTACTTGT...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCTTGTGGGAGATGGAGTTTCTTTTCTGATCCCTCCCCTGATTCCAACCCCTATCACCCCCTGCACTaGGCAGGACATTCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASCGRWSFFSDPSPDSNPYHPLH*AGHSWQ Trigger: CTGCCAGGAATGTCCTGCTCAGTGCAGGGGGTGATA...GGGGTTGGAATCAGGGGAGGGATCAGAAAAGAAACTCCATCTCCCACAAGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATGGGAATATGACCCAGCCGCGTaGAGACAGCCCGCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGLFVSKKLPSLEVRRWEYDPAA*RQPAWV Trigger: GACCCATGCGGGCTGTCTTCACGCGGCTGGGTCATA...TTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACTGAGGTGCCCCCTAGTTTGGGCAAGGCCTGGTTCCCTCATGGTGCCCTAGCAGGCTACCATTaGTGTTCCAACACACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRTEVPPSLGKAWFPHGALAGYH*CSNTRC Trigger: ACAGCGTGTGTTGGAACAGCAATGGTAGCCTGCTAG...GGCACCATGAGGGAACCAGGCCTTGCCCAAACTAGGGGGCACCTCAGTCCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTACAAGTAGACGATGCTaGAGTCAGGATCGTAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: CRVPDQKPVLPVGAPCPITSRRC*SQDRRM Trigger: CATTCTACGATCCTGACTCCAGCATCGTCTACTTGT...AATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| 3UTR CAA 72 bp | TGGTGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTaGGAAGTGAGAAGATGGGAAGAGCCCTCTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: WWGLFVSKKLPS*EVRRWEEPSAI Trigger: TATGGCAGAGGGCTCTTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| 3UTR CAA 72 bp | TTCCCTCATGGTGCCTTGGGGAATGGGGGCAGCATATaGGCTTTCTGTGCAGGAGGCACAGACTTGTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: FPHGALGNGGSI*AFCAGGTDLYL Trigger: TAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATATGCTGCCCCCATTCCCCAAGGCACCATGAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTTGAACCTGCTTCCGTGTGCCTGTTCTCCTGAGATTTCTCTAGAAATTTGGGGTTaGCGGCACAGAAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVLNLLPCACSPEISLEIWG*RHRRRC Trigger: ACAGCGCCTTCTGTGCCGTCAACCCCAAATTTCTAG...AGAAATCTCAGGAGAACAGGCACACGGAAGCAGGTTCAACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATGGGAACGATTTCACATTTGCTaGCATCCAGTCCCCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGLFVSKKLPSLEVRRWERFHIC*HPVPAW Trigger: CCAAGCGGGGACTGGATGTCAGCAAATGTGAAATCG...TTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGTGAGAAGATGGGAAGAGCCCTCTGCCATAGAATTATGGTTGAAGCCAGATGCCAAGACAGGATaGCCACACGCTTGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEVRRWEEPSAIELWLKPDAKTG*PHAWSG Trigger: GCCACTCCAAGCGTGTGGGCATCCTGTCTTGGCATC...TGGCTTCAACCATAATTCTATGGCAGAGGGCTCTTCCCATCTTCTCACTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTTGAACCTGCTTCCGTGTGCCTGTTCTCCTGAGATTTCTCTGGTGGTAGTAACACTCCGTTaGTTGTGTCCATCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVLNLLPCACSPEISLVVVTLR*LCPSPA Trigger: TGCAGGAGATGGACACAAGCAACGGAGTGTTACTAC...CACCAGAGAAATCTCAGGAGAACAGGCACACGGAAGCAGGTTCAACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCTTATTAGGAGAAATATTGGAAATTTCCTGAGGTTCTGGGGATATCTGCCAGAGGCAGGACAATaGAGGCACCTCCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLIRRNIGNFLRFWGYLPEAGQ*RHLHLQ Trigger: CTGGAGGTGGAGGTGCCTTCATTGTCCTGCCTCTGG...CAGATATCCCCAGAACCTCAGGAAATTTCCAATATTTCTCCTAATAAGCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR CCA 90 bp | CATATTGGCTTTCTGTGCAGGAGGCACAGACTTGTACTTAGTGAAGTATTTCATAGGCCTAGCTCTCGCTaGCTCATGCGGGTGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIGFLCRRHRLVLSEVFHRPSSR*LMRVNP Trigger: GGGATTCACCCGCATGAGCCAGCGAGAGCTAGGCCT...ATGAAATACTTCACTAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| 3UTR CAA 72 bp | AATATTGGAAATTTCCTGAGGTTCTGGGGATATCTGTaGAATCGCCATTCCTGTGAGGTCAGGCCTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NIGNFLRFWGYL*NRHSCEVRPRP Trigger: GGGCCTAGGCCTGACCTCACAGGAATGGCGATTCAACAGATATCCCCAGAACCTCAGGAAATTTCCAATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR TCA 90 bp | ATATTGGCTTTCTGTGCAGGAGGCACAGACTTGTACTTAGTGAAGTATTTCATTCCCGTGGTGAAGATATaGCCCAGCCGCGTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ILAFCAGGTDLYLVKYFIPVVKI*PSRVKT Trigger: TGTCTTCACGCGGCTGGGTCATATCTTCACCACGGG...AATGAAATACTTCACTAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCTTATTAGGAGAAATATTGGAAATTTCCTGAGGTTCTGGGGATATCTGACAGGTTCTGCATCCTaGCCTGATAGCCACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLIRRNIGNFLRFWGYLTGSAS*PDSHSS Trigger: TGATGAGTGGCTATCAGGTCAGGATGCAGAACCTGT...CAGATATCCCCAGAACCTCAGGAAATTTCCAATATTTCTCCTAATAAGCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| 3UTR CAA 72 bp | GGCAGCATATTGGCTTTCTGTGCAGGAGGCACAGACTaGTACTTAGTGAAGTATTTCATTAGTAATGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSILAFCAGGTD*YLVKYFISNAS Trigger: TGAGGCATTACTAATGAAATACTTCACTAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATATGCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS CCA 90 bp | GCCGGTGCTGAGCAGCTTCCCGTCTGCGGTGAAGACGGCCCGCAGTaGGCGGGCGCCCTCGTGAGGCCGGGCTCGCTCCGCAACCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGAEQLPVCGEDGPQ*AGALVRPGSLRNHL Trigger: CAAGTGGTTGCGGAGCGAGCCCGGCCTCACGAGGGCGCCCGCCCACTGCGGGCCGTCTTCACCGCAGACGGGAAGCTGCTCAGCACCGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021190.9 |
||
| CDS GCA 90 bp | CCAGGGTGTGCTGCTGCGACAAGGGGGCCTCGCTGGCGGACTGGCTaGGCCGAGGACTGGCCGGCGGGCGCACATCTAGGATGTTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGCAAATRGPRWRTG*AEDWPAGAHLGCCV Trigger: AACGCAACATCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCAGCACACCCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052515.12 |
||
| CDS CCA 90 bp | GTCTCCAGGGTGTGCTGCTGCGACAAGGGGGCCTCGCTGGCGGACTaGCTGCGCCGAGGACTGGCCGGCGGGCGCACATCTAGGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSRVCCCDKGASLAD*LRRGLAGGRTSRML Trigger: CAACATCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCAGCACACCCTGGAGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052515.12 |
||
| CDS GCA 90 bp | TCTCCAGGGTGTGCTGCGACAAGGGGGCCTCGCTGGCGGACTGGCTaGGCCGAGGACTGGCCGGCGGGCGCACATCTAGGATGTTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPGCAATRGPRWRTG*AEDWPAGAHLGCCV Trigger: AACGCAACATCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCACACCCTGGAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021190.9 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 90 bp | AATGTCTCCAGGGTGTGCTGCGACAAGGGGGCCTCGCTGGCGGACTaGCTGCGCCGAGGACTGGCCGGCGGGCGCACATCTAGGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NVSRVCCDKGASLAD*LRRGLAGGRTSRML Trigger: CAACATCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCACACCCTGGAGACATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021190.9 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | AGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGAGTGATGCGCTCCTCTaGGGCCTGCACTCGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRCCQSVRPAPLSLQCAESDALL*GLHSIS Trigger: CGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACT...CTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATCCACTCGTCCTGTCTaGGCCAGAGGCAGGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GAEFQTKSRCCQSVRPAPSTRPV*ARGRTM Trigger: CATTGTCCTGCCTCTGGCCAAGACAGGACGAGTGGA...TGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTGATGCGCTCCTCTaGGGCCTGCACTCGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AEFQTKSRCCQSVRPAPLSDALL*GLHSIS Trigger: CGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACT...CAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS TCA 90 bp | CCTAGCTCTCGCTGGCTCATGCGGGTGAATCCCGTGGTGAAGATATaGCCCAGCCGCGTGAAGACAGCCCGCATGGGTCTCATCCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PSSRWLMRVNPVVKI*PSRVKTARMGLIPS Trigger: CGAGGGGATGAGACCCATGCGGGCTGTCTTCACGCGGCTGGGTCATATCTTCACCACGGGATTCACCCGCATGAGCCAGCGAGAGCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAAGGCCTGGTCAGCCTTaGCTGCCTGACCAAACACGT | + |
|
Preference number: 5 (lower is better) Translates to: PDQKPVLPVGAPCPIESARPGQP*LPDQTR Trigger: ACGTGTTTGGTCAGGCAGCAAAGGCTGACCAGGCCT...TGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGGCCTGGTCAGCCTTaGCTGCCTGACCAAACACGT | + |
|
Preference number: 5 (lower is better) Translates to: QKPVLPVGAPCPIESAVCRPGQP*LPDQTR Trigger: ACGTGTTTGGTCAGGCAGCAAAGGCTGACCAGGCCT...GCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCACTGTCCCATGTGACCTaGGATACCCGGATGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GAEFQTKSRCCQSVRPAPLSHVT*DTRMSS Trigger: TGAGGACATCCGGGTATCCAAGGTCACATGGGACAG...TGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTTCCACTCGTCCTGTCTaGGCCAGAGGCAGGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: RCCQSVRPAPLSLQCAELSTRPV*ARGRTM Trigger: CATTGTCCTGCCTCTGGCCAAGACAGGACGAGTGGA...AAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGGCACTGGCGATGACGTaGTCATTGTGTGGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQALAMT*SLCGHQ Trigger: CTGGTGCCCACACAATGACAACGTCATCGCCAGTGC...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTACATCCAGTCCCCGCTaGGGCATGAAACCCATACCC | + |
|
Preference number: 5 (lower is better) Translates to: RCCQSVRPAPLSLQCAELTSSPR*GMKPIP Trigger: GGGTATGGGTTTCATGCCCAAGCGGGGACTGGATGT...AAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS GCA 90 bp | CAGCCGCGTGAAGACAGCCCGCATGGGTCTCATCCCCTCGTGGGCTaGAAACCTCTCCGCAACCACTTGACTCTTCCGGGGGTCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPREDSPHGSHPLVG*KPLRNHLTLPGVND Trigger: ATCATTGACCCCCGGAAGAGTCAAGTGGTTGCGGAGAGGTTTGCAGCCCACGAGGGGATGAGACCCATGCGGGCTGTCTTCACGCGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAAGGCCTGGTCAGCCTTaGCTGCCTGACCAAACACGT | + |
|
Preference number: 5 (lower is better) Translates to: KSRCCQSVRPAPLSLQCARPGQP*LPDQTR Trigger: ACGTGTTTGGTCAGGCAGCAAAGGCTGACCAGGCCT...TGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTGCTAGAAATTTGGGGTaGACGGCACAGAAGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCCQSVRPAPLSLQCAELARNLG*TAQKAL Trigger: CAGCGCCTTCTGTGCCGTCAACCCCAAATTTCTAGC...AAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCATCCACTCGTCCTGTCTaGGCCAGAGGCAGGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: KSRCCQSVRPAPLSLQCASTRPV*ARGRTM Trigger: CATTGTCCTGCCTCTGGCCAAGACAGGACGAGTGGA...TGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCACTGGCGATGACGTaGTCATTGTGTGGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPDQKPVLPVGAPCPIESALAMT*SLCGHQ Trigger: CTGGTGCCCACACAATGACAACGTCATCGCCAGTGC...AGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGATGATGCGCAAGGTCTaGTCCTTGCAGGTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DQKPVLPVGAPCPIESAVMMRKV*SLQVVA Trigger: AGCCACCACCTGCAAGGACAAGACCTTGCGCATCAT...CACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGATGATGCGCAAGGTCTaGTCCTTGCAGGTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTKSRCCQSVRPAPLSLQMMRKV*SLQVVA Trigger: AGCCACCACCTGCAAGGACAAGACCTTGCGCATCAT...CTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTACATCCAGTCCCCGCTaGGGCATGAAACCCATACCC | + |
|
Preference number: 5 (lower is better) Translates to: VPDQKPVLPVGAPCPIESTSSPR*GMKPIP Trigger: GGGTATGGGTTTCATGCCCAAGCGGGGACTGGATGT...AGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | TTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGACATCCAGTCCCCGCTaGGGCATGAAACCCATACCC | + |
|
Preference number: 5 (lower is better) Translates to: FQTKSRCCQSVRPAPLSLTSSPR*GMKPIP Trigger: GGGTATGGGTTTCATGCCCAAGCGGGGACTGGATGT...CAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGCTGGCGATTTCACATTaGCTGACATCCAGTCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AEFQTKSRCCQSVRPAPLLAISH*LTSSPR Trigger: GCGGGGACTGGATGTCAGCAAATGTGAAATCGCCAG...CAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATCTGGCGATTTCACATTaGCTGACATCCAGTCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VQSSRPKAGAASRCALPHLAISH*LTSSPR Trigger: GCGGGGACTGGATGTCAGCAAATGTGAAATCGCCAG...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTTTCTAGGATGTTGCGTTaGGTGACCCGAAGCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: RCCQSVRPAPLSLQCAELSRMLR*VTRSSR Trigger: CCGTGAGCTTCGGGTCACCAAACGCAACATCCTAGA...AAGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTCTAGGATGTTGCGTTaGGTGACCCGAAGCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: VQSSRPKAGAASRCALPHSRMLR*VTRSSR Trigger: CCGTGAGCTTCGGGTCACCAAACGCAACATCCTAGA...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGCTAGAAATTTGGGGTaGACGGCACAGAAGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CRVPDQKPVLPVGAPCPIARNLG*TAQKAL Trigger: CAGCGCCTTCTGTGCCGTCAACCCCAAATTTCTAGC...AATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGGGTAGTAACACTCCGTaGCTTGTGTCCATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AEFQTKSRCCQSVRPAPLGSNTP*LVSISC Trigger: GCAGGAGATGGACACAAGCAACGGAGTGTTACTACC...CAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGAGCTGAAACCCATACCCCGTaGCGGTTCTTTGCTGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLPVGAPCPIESAVCRAETHTP*RFFAAK Trigger: TTTAGCAGCAAAGAACCGCAACGGGGTATGGGTTTC...AGCTCTGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTTCTAGGATGTTGCGTTaGGTGACCCGAAGCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: CRVPDQKPVLPVGAPCPISRMLR*VTRSSR Trigger: CCGTGAGCTTCGGGTCACCAAACGCAACATCCTAGA...AATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGTGCAGGTAGTAACACTCCGTaGCTTGTGTCCATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSRCCQSVRPAPLSLQCAGSNTP*LVSISC Trigger: GCAGGAGATGGACACAAGCAACGGAGTGTTACTACC...TGCACACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAGTGGAAACCCATACCCCGTaGCGGTTCTTTGCTGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: DQKPVLPVGAPCPIESAVETHTP*RFFAAK Trigger: TTTAGCAGCAAAGAACCGCAACGGGGTATGGGTTTC...CACTGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS TCA 90 bp | TGGTGGCTAGCAGGCTACCATTGCTGTTCCAACACACGCTGTGGATaGCGTCAGGGTGTATGTCGTCCAGGCTCAGCAGTACCTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WWLAGYHCCSNTRCG*RQGVCRPGSAVPPQ Trigger: CTGGGGAGGTACTGCTGAGCCTGGACGACATACACCCTGACGTCATCCACAGCGTGTGTTGGAACAGCAATGGTAGCCTGCTAGCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS TCA 90 bp | AGTCTGTGCCGTCCACCAGCTCACAGAGCATGTTTTCCAACGCAGTaGTGCGCTCCTCTTGGGCCTGCACTCGATCTCGGAGGGCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLCRPPAHRACFPTQ*CAPLGPALDLGGPL Trigger: TAAAGGCCCTCCGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACATGCTCTGTGAGCTGGTGGACGGCACAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 90 bp | CAGGTGGTGGCTAGCAGGCTACCATTGCTGTTCCAACACACGCTGTaGATGACGTCAGGGTGTATGTCGTCCAGGCTCAGCAGTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVVASRLPLLFQHTL*MTSGCMSSRLSSTS Trigger: GGAGGTACTGCTGAGCCTGGACGACATACACCCTGACGTCATCCACAGCGTGTGTTGGAACAGCAATGGTAGCCTGCTAGCCACCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 90 bp | TCCAGGGCAGGCTCAGGGCCAGGCGTGTCTGGGTATAGGTCATCCTaGAACAGGTCTGACTTTCGCGGTACAGTCATGATGATGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRAGSGPGVSGYRSS*NRSDFRGTVMMMGS Trigger: TGAACCCATCATCATGACTGTACCGCGAAAGTCAGACCTGTTCCAGGATGACCTATACCCAGACACGCCTGGCCCTGAGCCTGCCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | CCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATTGAGTCTGCAATAATGGCTAGAAATTaGGGGTTGACGGCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PDQKPVLPVGAPCPIESAIMARN*GLTAQK Trigger: CTTCTGTGCCGTCAACCCCAAATTTCTAGCCATTAT...TGCAGACTCAATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GTGCAGAGTTCCAGACCAAAAGCCGGTGCTGCCAGTCGGTGCGCCCTGCCCCATATAATGGCTAGAAATTaGGGGTTGACGGCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQSSRPKAGAASRCALPHIMARN*GLTAQK Trigger: CTTCTGTGCCGTCAACCCCAAATTTCTAGCCATTAT...ATGGGGCAGGGCGCACCGACTGGCAGCACCGGCTTTTGGTCTGGAACTCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052515.12 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTGATCCCTCCCCTGATTCCAACCCCACGAGGCAGGGTGCAGAGTTCCAGACTGGCGATTTCACATTaGCTGACATCCAGTCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FLIPPLIPTPRGRVQSSRLAISH*LTSSPR Trigger: GCGGGGACTGGATGTCAGCAAATGTGAAATCGCCAG...TCTGGAACTCTGCACCCTGCCTCGTGGGGTTGGAATCAGGGGAGGGATCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS GCA 90 bp | TCACAGAGCATGTTTTCCAACGCAGTGATGCGCTCCTCTTGGGCCTaGACTCGATCTCGGAGGGCCTTTATCTCCTCCAGCAATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQSMFSNAVMRSSWA*TRSRRAFISSSNVS Trigger: GGAGACATTGCTGGAGGAGATAAAGGCCCTCCGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACATGCTCTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 90 bp | ACCAGCTCACAGAGCATGTTTTCCAACGCAGTGATGCGCTCCTCTTaGGCCTGCACTCGATCTCGGAGGGCCTTTATCTCCTCCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TSSQSMFSNAVMRSS*ACTRSRRAFISSSN Trigger: ATTGCTGGAGGAGATAAAGGCCCTCCGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACATGCTCTGTGAGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATGGGAAGCACTGGCGATGACGTaGTCATTGTGTGGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: WGLFVSKKLPSLEVRRWEALAMT*SLCGHQ Trigger: CTGGTGCCCACACAATGACAACGTCATCGCCAGTGC...TTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTTGAACCTGCTTCCGTGTGCCTGTTCTCCTGAGATTTCTCTGTCCCATGTGACCTaGGATACCCGGATGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVLNLLPCACSPEISLSHVT*DTRMSS Trigger: TGAGGACATCCGGGTATCCAAGGTCACATGGGACAG...AGAAATCTCAGGAGAACAGGCACACGGAAGCAGGTTCAACACACACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTTGAACCTGCTTCCGTGTGCCTGTTCTCCTGAGATTTCTGCTAGAAATTTGGGGTaGACGGCACAGAAGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVLNLLPCACSPEISARNLG*TAQKAL Trigger: CAGCGCCTTCTGTGCCGTCAACCCCAAATTTCTAGC...AGAAATCTCAGGAGAACAGGCACACGGAAGCAGGTTCAACACACACACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATGGGAAGGTAGTAACACTCCGTaGCTTGTGTCCATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WGLFVSKKLPSLEVRRWEGSNTP*LVSISC Trigger: GCAGGAGATGGACACAAGCAACGGAGTGTTACTACC...TTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTCTGTTTGTCTCCAAGAAGCTGCCGTCTTTGGAAGTGAGAAGATGGGAAGAAACCCATACCCCGTaGCGGTTCTTTGCTGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WGLFVSKKLPSLEVRRWEETHTP*RFFAAK Trigger: TTTAGCAGCAAAGAACCGCAACGGGGTATGGGTTTC...TTCCCATCTTCTCACTTCCAAAGACGGCAGCTTCTTGGAGACAAACAGACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS-3UTR CAA 90 bp | AGCATATTGGCTTTCTGTGCAGGAGGCACAGACTTGTACTTAGTGAAGTATTTCAGTGATGCGCTCCTCTaGGGCCTGCACTCGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SILAFCAGGTDLYLVKYFSDALL*GLHSIS Trigger: CGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACT...GAAATACTTCACTAAGTACAAGTCTGTGCCTCCTGCACAGAAAGCCAATATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS CCA 90 bp | AGTACCGAATGCTACTGTCACCCTTGCCACACAAGTAGACGATGCTaGAGTCAGGATCGTAGAATGGTAGTAACACTCCGTTGCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: STECYCHPCHTSRRC*SQDRRMVVTLRCLC Trigger: ACACAAGCAACGGAGTGTTACTACCATTCTACGATCCTGACTCCAGCATCGTCTACTTGTGTGGCAAGGGTGACAGTAGCATTCGGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGCACAGACTTGTACTTAGTGAAGTATTTCATTAGTAATGCCTCAGTGTTTATGATGCGCAAGGTCTaGTCCTTGCAGGTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGTDLYLVKYFISNASVFMMRKV*SLQVVA Trigger: AGCCACCACCTGCAAGGACAAGACCTTGCGCATCAT...AAACACTGAGGCATTACTAATGAAATACTTCACTAAGTACAAGTCTGTGCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102493.8 |
||
| CDS CCA 72 bp | GAGCAGCTTCCCGTCTGCGGTGAAGACGGCCCGCAGTaGGCGGGCGCCCTCGTGAGGCCGGGCTCGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: EQLPVCGEDGPQ*AGALVRPGSLR Trigger: GCGGAGCGAGCCCGGCCTCACGAGGGCGCCCGCCCACTGCGGGCCGTCTTCACCGCAGACGGGAAGCTGCTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021190.9 |
||
| CDS GCA 72 bp | GCTGCTGCGACAAGGGGGCCTCGCTGGCGGACTGGCTaGGCCGAGGACTGGCCGGCGGGCGCACATCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAATRGPRWRTG*AEDWPAGAHLG Trigger: TCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052515.12 |
||
| CDS CCA 72 bp | AGGGTGTGCTGCGACAAGGGGGCCTCGCTGGCGGACTaGCTGCGCCGAGGACTGGCCGGCGGGCGCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: RVCCDKGASLAD*LRRGLAGGRTS Trigger: AGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCACACCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021190.9 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 72 bp | ATGTCTCCAGGGTGTGCTGCGACAAGGGGGCCTCGCTaGCGGACTGGCTGCGCCGAGGACTGGCCGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MSPGCAATRGPR*RTGCAEDWPAG Trigger: GCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCACACCCTGGAGACAT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021190.9 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 72 bp | GTGTGCTGCTGCGACAAGGGGGCCTCGCTGGCGGACTaGCTGCGCCGAGGACTGGCCGGCGGGCGCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: VCCCDKGASLAD*LRRGLAGGRTS Trigger: AGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCAGCACAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052515.12 |
||
| CDS GCA 72 bp | TGTGCTGCGACAAGGGGGCCTCGCTGGCGGACTGGCTaGGCCGAGGACTGGCCGGCGGGCGCACATCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CAATRGPRWRTG*AEDWPAGAHLG Trigger: TCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCTTGTCGCAGCACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021190.9 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 72 bp | AGGGGGCCTCGCTGGCGGACTGGCTGCGCCGAGGACTaGCCGGCGGGCGCACATCTAGGATGTTGCGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPRWRTGCAED*PAGAHLGCCVW Trigger: CCAAACGCAACATCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCGCAGCCAGTCCGCCAGCGAGGCCCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CAA 72 bp | CGCCGAGGACTGGCCGGCGGGCGCACATCTAGGATGTaGCGTTTGGTGACCCGAAGCTCACGGTGTTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRGLAGGRTSRM*RLVTRSSRCLG Trigger: CCCCAAACACCGTGAGCTTCGGGTCACCAAACGCAACATCCTAGATGTGCGCCCGCCGGCCAGTCCTCGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS TCA 72 bp | CGCTGGCTCATGCGGGTGAATCCCGTGGTGAAGATATaGCCCAGCCGCGTGAAGACAGCCCGCATGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RWLMRVNPVVKI*PSRVKTARMGL Trigger: GAGACCCATGCGGGCTGTCTTCACGCGGCTGGGTCATATCTTCACCACGGGATTCACCCGCATGAGCCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS GCA 72 bp | GAAGACAGCCCGCATGGGTCTCATCCCCTCGTGGGCTaGAAACCTCTCCGCAACCACTTGACTCTTCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EDSPHGSHPLVG*KPLRNHLTLPG Trigger: CCCCGGAAGAGTCAAGTGGTTGCGGAGAGGTTTGCAGCCCACGAGGGGATGAGACCCATGCGGGCTGTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS TCA 72 bp | CGTCCACCAGCTCACAGAGCATGTTTTCCAACGCAGTaGTGCGCTCCTCTTGGGCCTGCACTCGATCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RPPAHRACFPTQ*CAPLGPALDLG Trigger: TCCGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACATGCTCTGTGAGCTGGTGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CAA 90 bp | CACCAGCTCACAGAGCATGTTTTCCAACGCAGTGATGCGCTCCTCTaGGGCCTGCACTCGATCTCGGAGGGCCTTTATCTCCTCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: HQLTEHVFQRSDALL*GLHSISEGLYLLQQ Trigger: TTGCTGGAGGAGATAAAGGCCCTCCGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACATGCTCTGTGAGCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS GCA 72 bp | ATGTTTTCCAACGCAGTGATGCGCTCCTCTTGGGCCTaGACTCGATCTCGGAGGGCCTTTATCTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MFSNAVMRSSWA*TRSRRAFISSS Trigger: GCTGGAGGAGATAAAGGCCCTCCGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 72 bp | AATGTCCAGCACAGGGCCAGTGTGCCCAGTGACCAGTaGGTAGTTCTTATCCACTCGTCCTGTCTTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NVQHRASVPSDQ*VVLIHSSCLGQ Trigger: CTGGCCAAGACAGGACGAGTGGATAAGAACTACCCACTGGTCACTGGGCACACTGGCCCTGTGCTGGACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
||
| CDS CCA 72 bp | GCTAGCAGGCTACCATTGCTGTTCCAACACACGCTGTaGATGACGTCAGGGTGTATGTCGTCCAGGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASRLPLLFQHTL*MTSGCMSSRLS Trigger: GCTGAGCCTGGACGACATACACCCTGACGTCATCCACAGCGTGTGTTGGAACAGCAATGGTAGCCTGCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS CCA 72 bp | CAGAGCATGTTTTCCAACGCAGTGATGCGCTCCTCTTaGGCCTGCACTCGATCTCGGAGGGCCTTTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: QSMFSNAVMRSS*ACTRSRRAFIS Trigger: GGAGATAAAGGCCCTCCGAGATCGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACATGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS TCA 72 bp | GCAGGCTACCATTGCTGTTCCAACACACGCTGTGGATaGCGTCAGGGTGTATGTCGTCCAGGCTCAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: AGYHCCSNTRCG*RQGVCRPGSAV Trigger: TACTGCTGAGCCTGGACGACATACACCCTGACGTCATCCACAGCGTGTGTTGGAACAGCAATGGTAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS TCA 72 bp | CCTTCCTTCAGCGAAATGAGCACAGGTTCTGCATCCTaGCCTGATAGCCACTCATCAGCTTCCAGGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PSFSEMSTGSAS*PDSHSSASRAG Trigger: GCCTGCCCTGGAAGCTGATGAGTGGCTATCAGGTCAGGATGCAGAACCTGTGCTCATTTCGCTGAAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS TCA 72 bp | AGGGCCACTGGCTCTTCGAAATTGTTCGCAACCACTTaGCTCTTCCGGGGGTCAATGATGCGCAAGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RATGSSKLFATT*LFRGSMMRKVL Trigger: CAAGACCTTGCGCATCATTGACCCCCGGAAGAGTCAAGTGGTTGCGAACAATTTCGAAGAGCCAGTGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052515.12 ENSMUST00000079770.3 |
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| CDS CCA 72 bp | TGCTACTGTCACCCTTGCCACACAAGTAGACGATGCTaGAGTCAGGATCGTAGAATGGTAGTAACACTCCGT | + |
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Preference number: 6 (lower is better) Translates to: CYCHPCHTSRRC*SQDRRMVVTLR Trigger: ACGGAGTGTTACTACCATTCTACGATCCTGACTCCAGCATCGTCTACTTGTGTGGCAAGGGTGACAGTAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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| CDS GCA 72 bp | GAATGCTACTGTCACCCTTGCCACACAAGTAGACGATaGTGGAGTCAGGATCGTAGAATGGTAGTAACACTC | + |
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Preference number: 6 (lower is better) Translates to: ECYCHPCHTSRR*WSQDRRMVVTL Trigger: GAGTGTTACTACCATTCTACGATCCTGACTCCAGCATCGTCTACTTGTGTGGCAAGGGTGACAGTAGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021190.9 ENSMUST00000052515.12 ENSMUST00000079770.3 ENSMUST00000102493.8 ENSMUST00000108391.9 |
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