Pregenerated sensors for CORO2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041729Ensembl transcript IDs: ENSMUST00000048043.12, ENSMUST00000131981.2, ENSMUST00000164246.9, ENSMUST00000173171.3, ENSMUST00000174439.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTGAGGAGACTTGCCGGGAGCCAAGGGGGAAAGCCTGGCTCTTaGGGCTGCAAGGAGAAGCCGCAGCCAGTCAGGGGTGGGCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: PLRRLAGSQGGKPGS*GCKEKPQPVRGGLS Trigger: GGAAAGCCCACCCCTGACTGGCTGCGGCTTCTCCTTGCAGCCCCAAGAGCCAGGCTTTCCCCCTTGGCTCCCGGCAAGTCTCCTCAGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 90 bp | TGGGAGTGGGGAACGTCGGTGGTTGGAGAGGAGAGGCCCCAGGGCTaGGGAAATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: WEWGTSVVGEERPQG*GNLTSARLEGICSW Trigger: CCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATTTCCCCAGCCCTGGGGCCTCTCCTCTCCAACCACCGACGTTCCCCACTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR GCA 90 bp | CGCAGGCCAGGAGGGTCCAGGGCACTGAGTGTGAGAGCCTCAGCCTaGGTGTTGGCACTACTGGTGTTGGGCAGACAGTGGAAGTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RRPGGSRALSVRASA*VLALLVLGRQWKWL Trigger: AAGCCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGCCCTGGACCCTCCTGGCCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR GCA 90 bp | GCGGGGTGGAGGGAGACACAGGCAGAGCGTCCCTGGAAGCCATCTTaGTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: AGWRETQAERPWKPS*SACPRAKLYSFSLP Trigger: AGGCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCCAGGGACGCTCTGCCTGTGTCTCCCTCCACCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR TCA 90 bp | AGAAAGAAAAGGGCGGGCTGCCAGGCGCTCAACCATTGGGTGAGATaGCTTGAGCTTGCTCGGCAGCAGGAGCAGAAGGAGGCAGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: RKKRAGCQALNHWVR*LELARQQEQKEAEG Trigger: ACCTTCTGCCTCCTTCTGCTCCTGCTGCCGAGCAAGCTCAAGTCATCTCACCCAATGGTTGAGCGCCTGGCAGCCCGCCCTTTTCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 90 bp | TCAGCCTGCGTGTTGGCACTACTGGTGTTGGGCAGACAGTGGAAGTaGCTTCCAGGTCTCTTTCTGGGGAAGCCCACAAGGGGATTGGCA | + |
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Preference number: 1 (lower is better) Translates to: SACVLALLVLGRQWK*LPGLFLGKPTRGLA Trigger: TGCCAATCCCCTTGTGGGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAACACGCAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 90 bp | CTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGAAGTTTTGCAGGGTaGGCAGGCAAGAAGTGTCCTATGTATAGCAGATCCCAGCCGGTG | + |
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Preference number: 1 (lower is better) Translates to: LSSPGGHLQLGSFAG*AGKKCPMYSRSQPV Trigger: CACCGGCTGGGATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 90 bp | GAAGCCCACAAGGGGATTGGCATCTCAATACAGTGGGAAGGGCCCTaGCCGAAAGCTCTGGATACCAAGGGTACTTGGTCTGCTGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: EAHKGIGISIQWEGP*PKALDTKGTWSAAD Trigger: GTCAGCAGCAGACCAAGTACCCTTGGTATCCAGAGCTTTCGGCCAGGGCCCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR TCA 90 bp | TCAGGGGTGGGCTTTCCAGGAGAGGCTGGGGGACCGATGTTAGCATaGAGTCAGGAGGTCAAAGGTCAGCTTCCAGTTCTTGAGGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: SGVGFPGEAGGPMLA*SQEVKGQLPVLEVV Trigger: TACCACCTCAAGAACTGGAAGCTGACCTTTGACCTCCTGACTTCATGCTAACATCGGTCCCCCAGCCTCTCCTGGAAAGCCCACCCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 90 bp | TACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTaGGGAAGCCCACAAGGGGATTGGCATCTCAATACAGTGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: YWCWADSGSGFQVSF*GSPQGDWHLNTVGR Trigger: CCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 90 bp | ATCTATGTGTCAAAAACCTGGGTAAACTTTAAAGTGCTATGTGGGTaGAGTGGCTGTGGTCATCCTGTGTGTGTAAGGCTGAAAGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: IYVSKTWVNFKVLCG*SGCGHPVCVRLKVA Trigger: AGCCACTTTCAGCCTTACACACACAGGATGACCACAGCCACTCCACCCACATAGCACTTTAAAGTTTACCCAGGTTTTTGACACATAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CAA 90 bp | CCAGGAGGGTCCAGGGCACTGAGTGTGAGAGCCTCAGCCTGCGTGTaGGCACTACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PGGSRALSVRASACV*ALLVLGRQWKWLPG Trigger: ACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGCCCTGGACCCTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CAA 90 bp | AGCGGGGTGGAGGGAGACACAGGCAGAGCGTCCCTGGAAGCCATCTaGCTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SGVEGDTGRASLEAI*LCLPKGQTLFFLSA Trigger: GGCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCCAGGGACGCTCTGCCTGTGTCTCCCTCCACCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR GCA 90 bp | ACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGAAGCCCCTGGCTCTTGGGGCTaGAAGGAGAAGCCGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TGVGQTVEVASRSLSGEAPGSWG*KEKPQP Trigger: TGGCTGCGGCTTCTCCTTGCAGCCCCAAGAGCCAGG...GGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR GCA 90 bp | CGCTTTAGCACGCTGGGAGTGGGGAACGTCGGTGGTTGGAGAGGAGAGGCCCCAGTGTTTCAGAAGGAATaGTGGGGTCAGAGCGACTGG | + |
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Preference number: 2 (lower is better) Translates to: RFSTLGVGNVGGWRGEAPVFQKE*WGQSDW Trigger: CCAGTCGCTCTGACCCCAGCATTCCTTCTGAAACAC...TGGGGCCTCTCCTCTCCAACCACCGACGTTCCCCACTCCCAGCGTGCTAAAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGGGAAGCCCACAAGGGGATTGGCATCTCAATACAGTGGGAAGGGCCCTGGAAGGAGGCAGAAGGTaGGCAGAGCGCTCTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: FWGSPQGDWHLNTVGRALEGGRR*AERSPH Trigger: GTGGGGAGAGCGCTCTGCCCACCTTCTGCCTCCTTC...CAGGGCCCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGCTGGGGAAATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGAAACCATTGGGTGAGATaGCTTGAGCTTGCTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PGLGKSHLSSPGGHLQLGNHWVR*LELARQ Trigger: CTGCCGAGCAAGCTCAAGTCATCTCACCCAATGGTT...TCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATTTCCCCAGCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGGTAGGGTCTACCAACTaGTCCCCAGCTCCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RGPKRCRIPELRAEGHFLVGSTN*SPAPVQ Trigger: CTGGACTGGAGCTGGGGACCAGTTGGTAGACCCTAC...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CAA 90 bp | GCACTGAGTGTGAGAGCCTCAGCCTGCGTGTTGGCACTACTGGTGTaGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ALSVRASACVLALLV*GRQWKWLPGLFLGK Trigger: CTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCCCACATCTCCTCTACCCAAAGGGCGGTGACTGTCCTGACACCAGTGCTAAGGCTGAAAGTGGCTaGGATAGCAGGGTTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: RSPHLLYPKGGDCPDTSAKAESG*DSRVGS Trigger: ACTCCCAACCCTGCTATCTCAGCCACTTTCAGCCTT...AGCACTGGTGTCAGGACAGTCACCGCCCTTTGGGTAGAGGAGATGTGGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR GCA 90 bp | ACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGAAGCCTCCTGGCAGCCCCTCTaGAGGGGACACATTCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TGVGQTVEVASRSLSGEASWQPL*RGHIQD Trigger: ATCTTGAATGTGTCCCCTGCAGAGGGGCTGCCAGGA...GGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCCCACATCTCCTCTACCCAAAGGGCGGTGACTGTCCTGACACCAGTGCTTGGGTGGAGTGGCTGTaGTCATCCTGTGTGTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: RSPHLLYPKGGDCPDTSAWVEWL*SSCVCK Trigger: CTTACACACACAGGATGACCACAGCCACTCCACCCA...AGCACTGGTGTCAGGACAGTCACCGCCCTTTGGGTAGAGGAGATGTGGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGGGAAGCCCACAAGGGGATTGGCATCTCAATACAGTGGGAAGGGCCCTGATCCTCTTCATTCCCTaGAGACAAAGGGGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FWGSPQGDWHLNTVGRALILFIP*RQRGGR Trigger: CCTCCCACCCCTTTGTCTTCAGGGAATGAAGAGGAT...CAGGGCCCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR GCA 90 bp | GGAAGCCATCTTGCTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCGTGAGAGCCTCAGCCTaGGTGTTGGCACTACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GSHLALPAQGPNSILSLCVRASA*VLALLV Trigger: CACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCAC...GCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGGGCAAAGGGTCATTATaGCCATGGAGCACATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RGPKRCRIPELRAEGHFLGKGSL*PWSTSS Trigger: AGAGGATGTGCTCCATGGCCATAATGACCCTTTGCC...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CAA 90 bp | AATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGAAGTTTaGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: NLTSARLEGICSWEV*QGGQARSVLCIADP Trigger: GGGATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCCATCTTGCTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCCGCTCAACCATTGGGTaGGATGACTTGAGCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: GSHLALPAQGPNSILSLCRSTIG*DDLSLL Trigger: GAGCAAGCTCAAGTCATCTCACCCAATGGTTGAGCG...GCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATACGGAGAGATCGGCTTaGAAAACAGCCCGAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: SWEVLQGGQARSVLCIADTERSA*KTARGG Trigger: CCCGCCTCGGGCTGTTTTCCAAGCCGATCTCTCCGT...ATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCCATCTTGCTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCTTCCAGGTCTCTTTCTaGGGAAGCCCACAAGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSHLALPAQGPNSILSLCFQVSF*GSPQGD Trigger: ATCCCCTTGTGGGCTTCCCCAGAAAGAGACCTGGAA...GCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCCATCTTGCTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCAGCCCACAAGGGGATTaGCATCTCAATACAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSHLALPAQGPNSILSLCSPQGD*HLNTVG Trigger: TCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCT...GCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CAA 90 bp | CGCTTTAGCACGCTGGGAGTGGGGAACGTCGGTGGTTGGAGAGGAGAGGCCCCATCCCTGGAAGCCATCTaGCTCTGCCTGCCCAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: RFSTLGVGNVGGWRGEAPSLEAI*LCLPKG Trigger: GCCCTTGGGCAGGCAGAGCAAGATGGCTTCCAGGGA...TGGGGCCTCTCCTCTCCAACCACCGACGTTCCCCACTCCCAGCGTGCTAAAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | TCTGAGGAGACTTGCCGGGAGCCAAGGGGGAAAGCCTaGCTCTTGGGGCTGCAAGGAGAAGCCGCAGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: SEETCREPRGKA*LLGLQGEAAAS Trigger: ACTGGCTGCGGCTTCTCCTTGCAGCCCCAAGAGCCAGGCTTTCCCCCTTGGCTCCCGGCAAGTCTCCTCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | TGGTGGGGAGGAGAACTCGCTTTAGCACGCTGGGAGTaGGGAACGTCGGTGGTTGGAGAGGAGAGGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: WWGGELALARWE*GTSVVGEERPQ Trigger: CTGGGGCCTCTCCTCTCCAACCACCGACGTTCCCCACTCCCAGCGTGCTAAAGCGAGTTCTCCTCCCCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | CTGTGGTGGTGGGGAGGAGAACTCGCTTTAGCACGCTaGGAGTGGGGAACGTCGGTGGTTGGAGAGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LWWWGGELALAR*EWGTSVVGEER Trigger: CCTCTCCTCTCCAACCACCGACGTTCCCCACTCCCAGCGTGCTAAAGCGAGTTCTCCTCCCCACCACCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | CCGCAGCCAGTCAGGGGTGGGCTTTCCAGGAGAGGCTaGGGGACCGATGTTAGCATGAAGTCAGGAGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: PQPVRGGLSRRG*GTDVSMKSGGQ Trigger: TTGACCTCCTGACTTCATGCTAACATCGGTCCCCCAGCCTCTCCTGGAAAGCCCACCCCTGACTGGCTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR TCA 72 bp | AGAAAAGGGCGGGCTGCCAGGCGCTCAACCATTGGGTaGGATGACTTGAGCTTGCTCGGCAGCAGGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RKGRAARRSTIG*DDLSLLGSRSR Trigger: TCTGCTCCTGCTGCCGAGCAAGCTCAAGTCATCTCACCCAATGGTTGAGCGCCTGGCAGCCCGCCCTTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CAA 90 bp | TGTAGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCAACGGAGAGATCGGCTaGGAAAACAGCCCGAGGCGG | + |
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Preference number: 3 (lower is better) Translates to: CRGPKRCRIPELRAEGHFNGEIG*ENSPRR Trigger: CCGCCTCGGGCTGTTTTCCAAGCCGATCTCTCCGTT...GAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR TCA 72 bp | CTAAACCAGGCTGTAATCCCACTCATCCTGTCCCTCTaGGGAGACTTGCCGGGAGCCAAGGGGGAAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LNQAVIPLILSL*GDLPGAKGESL Trigger: CAGGCTTTCCCCCTTGGCTCCCGGCAAGTCTCCTCAGAGGGACAGGATGAGTGGGATTACAGCCTGGTTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR GCA 72 bp | GAGGGGCTAAAGCAAGCGTGTAGAGGACCAAAGAGATaGCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTC | + |
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Preference number: 3 (lower is better) Translates to: EGLKQACRGPKR*RIPELRAEGHF Trigger: GAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCTACACGCTTGCTTTAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR GCA 72 bp | TGGGGAAATCTCACCTCAGCTCGCCTGGAGGGCATCTaGAGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: WGNLTSARLEGI*SWEVLQGGQAR Trigger: TCTTGCCTGCCCACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | CCAACTGGTCCCCAGCTCCAGTCCAGGCCCTGTCTCTaGGCTCTACAGATAAGAGGCAGTTTAGGGACCAGT | + |
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Preference number: 3 (lower is better) Translates to: PTGPQLQSRPCL*ALQIRGSLGTS Trigger: ACTGGTCCCTAAACTGCCTCTTATCTGTAGAGCCCAGAGACAGGGCCTGGACTGGAGCTGGGGACCAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR TCA 72 bp | GCAAGAAGTGTCCTATGTATAGCAGATCCCAGCCGGTaGCCGAGGTCCCCACATCTCCTCTACCCAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: ARSVLCIADPSR*PRSPHLLYPKG Trigger: GCCCTTTGGGTAGAGGAGATGTGGGGACCTCGGTCACCGGCTGGGATCTGCTATACATAGGACACTTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR GCA 72 bp | CAGGCAGAGCGTCCCTGGAAGCCATCTTGCTCTGCCTaGCCAAGGGCCAAACTCTATTCTTTCTCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: QAERPWKPSCSA*PRAKLYSFSLP Trigger: AGGCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCCAGGGACGCTCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | TCTCAATACAGTGGGAAGGGCCCTGGCCGAAAGCTCTaGATACCAAGGGTACTTGGTCTGCTGCTGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: SQYSGKGPGRKL*IPRVLGLLLTL Trigger: GAGGGTCAGCAGCAGACCAAGTACCCTTGGTATCCAGAGCTTTCGGCCAGGGCCCTTCCCACTGTATTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | TTCCAGGTCTCTTTCTGGGGAAGCCCACAAGGGGATTaGCATCTCAATACAGTGGGAAGGGCCCTGGCCGAA | + |
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Preference number: 3 (lower is better) Translates to: FQVSFWGSPQGD*HLNTVGRALAE Trigger: TTCGGCCAGGGCCCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAAAGAGACCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | GTGTTGGCACTACTGGTGTTGGGCAGACAGTGGAAGTaGCTTCCAGGTCTCTTTCTGGGGAAGCCCACAAGG | + |
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Preference number: 3 (lower is better) Translates to: VLALLVLGRQWK*LPGLFLGKPTR Trigger: CCTTGTGGGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR CCA 72 bp | AATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTaGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: NLTSARLEGICS*EVLQGGQARSV Trigger: GACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| 3UTR-3UTR CAA 90 bp | AATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGAAGTTTTGCAGGGTTTGGCACTACTGGTGTaGGGCAGACAGTGGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NLTSARLEGICSWEVLQGLALLV*GRQWKW Trigger: CCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAA...ACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR GCA 72 bp | GACACAGGCAGAGCGTCCCTGGAAGCCATCTTGCTCTaGCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DTGRASLEAILL*LPKGQTLFFLS Trigger: AGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCCAGGGACGCTCTGCCTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATGGGAAAGCCTGGCTCTaGGGGCTGCAAGGAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SWEVLQGGQARSVLCIADGKAWL*GLQGEA Trigger: GGCTTCTCCTTGCAGCCCCAAGAGCCAGGCTTTCCC...ATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCCCACATCTCCTCTACCCAAAGGGCGGTGACTGTCCTGACACCAGTGCTCCTCGGTTCTGTCATTaGACAGGTAGGGACACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSPHLLYPKGGDCPDTSAPRFCH*TGRDTN Trigger: ATTAGTGTCCCTACCTGTCAAATGACAGAACCGAGG...AGCACTGGTGTCAGGACAGTCACCGCCCTTTGGGTAGAGGAGATGTGGGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR TCA 72 bp | GGCTTTCCAGGAGAGGCTGGGGGACCGATGTTAGCATaGAGTCAGGAGGTCAAAGGTCAGCTTCCAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GFPGEAGGPMLA*SQEVKGQLPVL Trigger: AAGAACTGGAAGCTGACCTTTGACCTCCTGACTTCATGCTAACATCGGTCCCCCAGCCTCTCCTGGAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR TCA 72 bp | TGGATACCAAGGGTACTTGGTCTGCTGCTGACCCTCTaGGTGACCCCTCGGTTCTGTCATTTGACAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: WIPRVLGLLLTL*VTPRFCHLTGR Trigger: CCTACCTGTCAAATGACAGAACCGAGGGGTCACTCAGAGGGTCAGCAGCAGACCAAGTACCCTTGGTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR CCA 72 bp | TGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTaGGGAAGCCCACAAGGGGATTGGCATCTCAATACA | + |
|
Preference number: 3 (lower is better) Translates to: WADSGSGFQVSF*GSPQGDWHLNT Trigger: TGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR TCA 72 bp | GTCATTATGGCCATGGAGCACATCCTCTTCATTCCCTaGAGACAAAGGGGTGGGAGGGAGTTCAGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIMAMEHILFIP*RQRGGREFRKK Trigger: TTTCTTTCTGAACTCCCTCCCACCCCTTTGTCTTCAGGGAATGAAGAGGATGTGCTCCATGGCCATAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR CCA 72 bp | TCAAAAACCTGGGTAAACTTTAAAGTGCTATGTGGGTaGAGTGGCTGTGGTCATCCTGTGTGTGTAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SKTWVNFKVLCG*SGCGHPVCVRL Trigger: CAGCCTTACACACACAGGATGACCACAGCCACTCCACCCACATAGCACTTTAAAGTTTACCCAGGTTTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR CCA 72 bp | GATGCACGAGTCGGTGAGATCTATGTGTCAAAAACCTaGGTAAACTTTAAAGTGCTATGTGGGTGGAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DARVGEIYVSKT*VNFKVLCGWSG Trigger: GCCACTCCACCCACATAGCACTTTAAAGTTTACCCAGGTTTTTGACACATAGATCTCACCGACTCGTGCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | AGAGATCGGCTTGGAAAACAGCCCGAGGCGGGGCTTACTCAGCCCAAGGCGGGGTGGAGACCCCTGTCGTaGGGAGCCGCTTCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDRLGKQPEAGLTQPKAGWRPLS*GAASCC Trigger: GCAACATGAAGCGGCTCCTCACGACAGGGGTCTCCA...CCCCGCCTTGGGCTGAGTAAGCCCCGCCTCGGGCTGTTTTCCAAGCCGATCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCTTGGGGCTGCAAGGAGAAGCCGCAGCCAGTCAGGGGTGGGCTTTCCAAGTTCGAGCTGGAGCTaGCGGAGCCGGATGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LALGAARRSRSQSGVGFPSSSWS*RSRMSF Trigger: GAAGGACATCCGGCTCCGTCAGCTCCAGCTCGAACT...TGGAAAGCCCACCCCTGACTGGCTGCGGCTTCTCCTTGCAGCCCCAAGAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | CGCTTTAGCACGCTGGGAGTGGGGAACGTCGGTGGTTGGAGAGGAGAGGCCCCACCTTGCATGTGGTGGTaGGCAGGCTGCCGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFSTLGVGNVGGWRGEAPPCMWW*AGCRLY Trigger: ATACAGACGGCAGCCTGCTCACCACCACATGCAAGG...TGGGGCCTCTCCTCTCCAACCACCGACGTTCCCCACTCCCAGCGTGCTAAAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | AGACTTGCCGGGAGCCAAGGGGGAAAGCCTGGCTCTTGGGGCTGCAAGGAGAAGGCCTTTCTGTGGGGCTaGGGAGCGGAACTCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLAGSQGGKPGSWGCKEKAFLWG*GAELHE Trigger: CTCATGGAGTTCCGCTCCCCAGCCCCACAGAAAGGC...CTTCTCCTTGCAGCCCCAAGAGCCAGGCTTTCCCCCTTGGCTCCCGGCAAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | AGAGATCGGCTTGGAAAACAGCCCGAGGCGGGGCTTACTCAGCCCAAGGCGGGGAGCAGTGCTCCCTGTTaGCCGCTTTCCCATACACGT | + |
|
Preference number: 4 (lower is better) Translates to: RDRLGKQPEAGLTQPKAGSSAPC*PLSHTR Trigger: ACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCT...CCCCGCCTTGGGCTGAGTAAGCCCCGCCTCGGGCTGTTTTCCAAGCCGATCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | CGCTTTAGCACGCTGGGAGTGGGGAACGTCGGTGGTTGGAGAGGAGAGGCCCCATTGGAACTGCGGTACTaGGGTCGCCAGGACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RFSTLGVGNVGGWRGEAPLELRY*GRQDIF Trigger: AAAGATGTCCTGGCGACCGCAGTACCGCAGTTCCAA...TGGGGCCTCTCCTCTCCAACCACCGACGTTCCCCACTCCCAGCGTGCTAAAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR CAA 72 bp | TCCAGGGCACTGAGTGTGAGAGCCTCAGCCTGCGTGTaGGCACTACTGGTGTTGGGCAGACAGTGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRALSVRASACV*ALLVLGRQWKW Trigger: CCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGCCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | AGAGATCGGCTTGGAAAACAGCCCGAGGCGGGGCTTACTCAGCCCAAGGCGGGGCATGTACATTCTTGGTaGTGGGGATCCCGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDRLGKQPEAGLTQPKAGHVHSW*WGSRQS Trigger: GCTTTGACGGGATCCCCATCACCAAGAATGTACATG...CCCCGCCTTGGGCTGAGTAAGCCCCGCCTCGGGCTGTTTTCCAAGCCGATCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | AGGTCCCCACATCTCCTCTACCCAAAGGGCGGTGACTGTCCTGACACCAGTGCTTTGTTGGTCGTGGGGTaGCACTCAACCAGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RSPHLLYPKGGDCPDTSALLVVG*HSTSPT Trigger: TGTGGGGCTGGTTGAGTGGCACCCCACGACCAACAA...AGCACTGGTGTCAGGACAGTCACCGCCCTTTGGGTAGAGGAGATGTGGGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTGAGTGTGAGAGCCTCAGCCTGCGTGTTGGCACTACTGGTGTTGGGCGGAGCCGCTTCATGTTaGCCAGGAACACTACCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RALSVRASACVLALLVLGGAASC*PGTLPD Trigger: ATCGGGTAGTGTTCCTGGGCAACATGAAGCGGCTCC...GCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | GTGGTAGGTAGGGTCTACCAACTGGTCCCCAGCTCCAGTCCAGGCCCTGTCTCTATGGACAGATCCTCCTaGTCCCAGAGGGCGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVGRVYQLVPSSSPGPVSMDRSS*SQRAIC Trigger: ACAGATCGCCCTCTGGGACCAGGAGGATCTGTCCAT...AGAGACAGGGCCTGGACTGGAGCTGGGGACCAGTTGGTAGACCCTACCTACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCTTGGGGCTGCAAGGAGAAGCCGCAGCCAGTCAGGGGTGGGCTTTCCACTGTGCCTGGTGTCATaGGATAAATGTCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LALGAARRSRSQSGVGFPLCLVS*DKCPPG Trigger: ACCAGGAGGACATTTATCCCATGACACCAGGCACAG...TGGAAAGCCCACCCCTGACTGGCTGCGGCTTCTCCTTGCAGCCCCAAGAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCATCTTGCTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCCTCCTGCGCTCTCAGTaGCTATGGCCAGGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLALPAQGPNSILSLCLLRSQ*LWPGSG Trigger: CCCGCTTCCTGGCCATAGTCACTGAGAGCGCAGGAG...GCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | GTGGTAGGTAGGGTCTACCAACTGGTCCCCAGCTCCAGTCCAGGCCCTGTCTCTGTTCAATCAGGCCCTTaGGGGTCACCAGCTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVGRVYQLVPSSSPGPVSVQSGP*GSPACR Trigger: TCTACAAGCTGGTGACCCTCAAGGGCCTGATTGAAC...AGAGACAGGGCCTGGACTGGAGCTGGGGACCAGTTGGTAGACCCTACCTACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | ACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGAAGCCGCACGGGATCTCGGTTaGTGCCTCCCAGCCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGVGQTVEVASRSLSGEAARDLG*CLPAIH Trigger: ATGAATGGCTGGGAGGCATCAACCGAGATCCCGTGC...GGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATCGGCGGCTGTGTCCGTaGAGCTCCAGGAGCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SWEVLQGGQARSVLCIADRRLCP*SSRSAS Trigger: CGAGGCGCTCCTGGAGCTCCACGGACACAGCCGCCG...ATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR TCA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGGGCTGCCGTCTGTATTaGAGGACATGCAGAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPKRCRIPELRAEGHFLGCRLY*RTCRGS Trigger: TGATCCTCTGCATGTCCTTCAATACAGACGGCAGCC...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR TCA 90 bp | AGGGCACTGAGTGTGAGAGCCTCAGCCTGCGTGTTGGCACTACTGGTGTTGGGCTGGGAACAGGAGGCCTaGGAGTCCATCAATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RALSVRASACVLALLVLGWEQEA*ESINFF Trigger: GAAGAAATTGATGGACTCTCAGGCCTCCTGTTCCCA...GCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR GCA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGGAAGCGGGCGTTGACTaGACAGAAGTGGTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RGPKRCRIPELRAEGHFLEAGVD*TEVVVM Trigger: CATGACAACCACTTCTGTGCAGTCAACGCCCGCTTC...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | AATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGAAGTTTTGCAGGGTTCGATTCTGCCTGTCTaGTCCAGGGGGATGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLTSARLEGICSWEVLQGSILPV*SRGMTR Trigger: CCTCGTCATCCCCCTGGAGCAGACAGGCAGAATCGA...ACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR GCA 90 bp | CACTACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGACCGGATGTCCTTCTGTaGCAGCTCCTCCTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HYWCWADSGSGFQVSFWGPDVLL*QLLLQP Trigger: AGGCTGAAGGAGGAGCTGGCACAGAAGGACATCCGG...TCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | AGAGATCGGCTTGGAAAACAGCCCGAGGCGGGGCTTACTCAGCCCAAGGCGGGGAGTTCTTGGGGTTGTTaGGCAGGTTTTTCAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RDRLGKQPEAGLTQPKAGSSWGC*AGFSVR Trigger: TCGAACTGAAAAACCTGCGCAACAACCCCAAGAACT...CCCCGCCTTGGGCTGAGTAAGCCCCGCCTCGGGCTGTTTTCCAAGCCGATCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTGAGTGTGAGAGCCTCAGCCTGCGTGTTGGCACTACTGGTGTTGGGCTACCTTGGGGTAGTTTaGCTCGATTCTGCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RALSVRASACVLALLVLGYLGVV*LDSACL Trigger: CAGACAGGCAGAATCGAGCCAAACTACCCCAAGGTA...GCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CCA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGCTTCGATCATTGGCATaGACAGATCCTCCTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGPKRCRIPELRAEGHFLLRSLA*TDPPGP Trigger: GGGACCAGGAGGATCTGTCCATGCCAATGATCGAAG...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR CAA 72 bp | GTGAGAGCCTCAGCCTGCGTGTTGGCACTACTGGTGTaGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRASACVLALLV*GRQWKWLPGLF Trigger: AAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | ACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGAAGCCGACACATCCAACCCATaGTTGGGCATGACACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGVGQTVEVASRSLSGEADTSNP*LGMTPR Trigger: CCTAGGTGTCATGCCCAAGCATGGGTTGGATGTGTC...GGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CCA 90 bp | TGTAGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCGCTGGCTCTGTGCCTaGTGTCATGGGATAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CRGPKRCRIPELRAEGHFRWLCA*CHGINV Trigger: GACATTTATCCCATGACACCAGGCACAGAGCCAGCG...GAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| 3UTR CAA 72 bp | AAATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTaGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSHLSSPGGHLQ*GSFAGWAGKKC Trigger: ACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATTCTGCTCCAGGGGGATaGCGAGGAAGGAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWEVLQGGQARSVLCIADSAPGG*RGRSHL Trigger: GAGGTGGCTCCTTCCTCGTCATCCCCCTGGAGCAGA...ATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCTGGGGAAATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGATCACTCTGTGGTTTTTaGAGTTTGCCTCCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLGKSHLSSPGGHLQLGSLCGF*SLPPVE Trigger: TTCTACAGGAGGCAAACTGCAAAAACCACAGAGTGA...TCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATTTCCCCAGCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR GCA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGCGAATCTCATCCTGCTaGCTAAAGAACATCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPKRCRIPELRAEGHFLRISSC*LKNILR Trigger: CCTCAGGATGTTCTTTAGGCAGCAGGATGAGATTCG...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | TTCTGGGGAAGCCCACAAGGGGATTGGCATCTCAATACAGTGGGAAGGGCCCTGTCCGGGGTACAATCATaGAGATGGGTTCAATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FWGSPQGDWHLNTVGRALSGVQS*RWVQSG Trigger: GCCTGATTGAACCCATCTCCATGATTGTACCCCGGA...CAGGGCCCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGAGACAGATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGGCACGGGATCTCGGTTaGTGCCTCCCAGCCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WRETDLSDIPASKFIPSQARDLG*CLPAIH Trigger: ATGAATGGCTGGGAGGCATCAACCGAGATCCCGTGC...CTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATCTGTCTCCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCCCCTCTGCAGGGGACACATTCAAGATCTAAACCAGGCTGTAATCCCATCAGCGCTGGCTCTGTaGCTGGTGTCATGGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: WQPLCRGHIQDLNQAVIPSALAL*LVSWDK Trigger: TTTATCCCATGACACCAGGCACAGAGCCAGCGCTGA...TGGGATTACAGCCTGGTTTAGATCTTGAATGTGTCCCCTGCAGAGGGGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCACCCGATTCACTCTGTaGTTTTTGCAGTTTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRGPKRCRIPELRAEGHFTRFTL*FLQFAS Trigger: GGAGGCAAACTGCAAAAACCACAGAGTGAATCGGGT...GAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | TCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGGAACCAAGCCTTTCTGTGGGGCTaGGGAGCGGAACTCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTSQLPSSFQVRGKGNQAFLWG*GAELHE Trigger: CTCATGGAGTTCCGCTCCCCAGCCCCACAGAAAGGC...TTGGTTCCCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATATCAGGGGTCAGCGCTaGCTCTGTGCCTGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWEVLQGGQARSVLCIADIRGQR*LCAWCH Trigger: ATGACACCAGGCACAGAGCCAGCGCTGACCCCTGAT...ATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
||
| CDS-3UTR CCA 90 bp | TCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGGAACCAAATCAGGGGTCAGCGCTaGCTCTGTGCCTGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSQLPSSFQVRGKGNQIRGQR*LCAWCH Trigger: ATGACACCAGGCACAGAGCCAGCGCTGACCCCTGAT...TTGGTTCCCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR TCA 90 bp | ACAGATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGGGCAACATAAAGGCCTaGCTCTTCCTGAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLSDIPASKFIPSQRQRGNIKA*LFLRCG Trigger: CCCACACCTCAGGAAGAGTCAGGCCTTTATGTTGCC...CCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR TCA 90 bp | GATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGGAAGCTGCCTTCCAAGCCTaGAGCTCACAGTGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DLSDIPASKFIPSQRQREAAFQA*SSQWQH Trigger: ATGTTGCCACTGTGAGCTTCAGGCTTGGAAGGCAGC...TTCCCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR GCA 90 bp | AGGGAGACAGATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGGACACATCCAACCCATaGTTGGGCATGACACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RETDLSDIPASKFIPSQRDTSNP*LGMTPR Trigger: CCTAGGTGTCATGCCCAAGCATGGGTTGGATGTGTC...CCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATCTGTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR CCA 90 bp | AATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGAAGTTTTGCAGGGTAGGATCACGTCGGTGTaGCAGTCAATCATTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: NLTSARLEGICSWEVLQGRITSV*QSIIFT Trigger: AGTGAAAATGATTGACTGCCACACCGACGTGATCCT...ACCCTGCAAAACTTCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR TCA 90 bp | GATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGGAAGTTCAATCAGGCCCTTaGGGGTCACCAGCTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLSDIPASKFIPSQRQREVQSGP*GSPACR Trigger: TCTACAAGCTGGTGACCCTCAAGGGCCTGATTGAAC...TTCCCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR GCA 90 bp | ACAGATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGTCAGCGCTGGCTCTGTaGCTGGTGTCATGGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLSDIPASKFIPSQRQRSALAL*LVSWDK Trigger: TTTATCCCATGACACCAGGCACAGAGCCAGCGCTGA...CCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR CCA 90 bp | CTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGGAACCACTGTGCCTGGTGTCATaGGATAAATGTCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSDIPASKFIPSQRQREPLCLVS*DKCPPG Trigger: ACCAGGAGGACATTTATCCCATGACACCAGGCACAG...TGGTTCCCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR CCA 90 bp | CACTACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGATTGACTGCACAGAAGTaGTTGTCATGTACATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HYWCWADSGSGFQVSFWGLTAQK*LSCTFL Trigger: CAAGAATGTACATGACAACCACTTCTGTGCAGTCAA...TCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGTAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CCA 90 bp | ATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGGAACTCCGGGGTACAATCATaGAGATGGGTTCAATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISLTSQLPSSFQVRGKGNSGVQS*RWVQSG Trigger: GCCTGATTGAACCCATCTCCATGATTGTACCCCGGA...GTTCCCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR CCA 90 bp | AGACAGATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAACGCTGGCTCTGTGCCTaGTGTCATGGGATAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQISLTSQLPSSFQVRGKRWLCA*CHGINV Trigger: GACATTTATCCCATGACACCAGGCACAGAGCCAGCG...TTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS-3UTR GCA 90 bp | AGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATCTTCGAATCTCATCCTaGTGCCTAAAGAACATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWEVLQGGQARSVLCIADLRISS*CLKNIL Trigger: CAGGATGTTCTTTAGGCAGCAGGATGAGATTCGAAG...ATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS CCA 90 bp | GTCGTGGGGTGCCACTCAACCAGCCCCACACGGCGGCTGTGTCCGTaGAGCTCCAGGAGCGCCTCGGTCATGTTCCGCTTCAGCCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VVGCHSTSPTRRLCP*SSRSASVMFRFSPP Trigger: CGGTGGGCTGAAGCGGAACATGACCGAGGCGCTCCTGGAGCTCCACGGACACAGCCGCCGTGTGGGGCTGGTTGAGTGGCACCCCACGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS-3UTR CAA 90 bp | AGGGGGAAAGCCTGGCTCTTGGGGCTGCAAGGAGAAGCCGCAGCCAGTCAGGGGAGAGGGCGATCTGTCTaGTGTTCCACCTGGAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: RGKAWLLGLQGEAAASQGRGRSV*CSTWRP Trigger: GGGTCTCCAGGTGGAACACAAGACAGATCGCCCTCT...CCCCTGACTGGCTGCGGCTTCTCCTTGCAGCCCCAAGAGCCAGGCTTTCCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS GCA 90 bp | TTGGCCGCTTTCCCATACACGTTCCGAAACTTGGAACTGCGGTACTaGGGTCGCCAGGACATCGCAGTCACTCGGGTGACAACCCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LAAFPYTFRNLELRY*GRQDIAVTRVTTPR Trigger: GCGCGGGGTTGTCACCCGAGTGACTGCGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173171.3 |
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| CDS CCA 90 bp | AGCAGTGCTCCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTTaGAACTGCGGTACTGCGGTCGCCAGGACATCGCAGTCACTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSAPCWPLSHTRSET*NCGTAVARTSQSLG Trigger: CCCGAGTGACTGCGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173171.3 |
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| CDS TCA 90 bp | CCCAGAGGGCGATCTGTCTTGTGTTCCACCTGGAGACCCCTGTCGTaGGGAGCCGCTTCATGTTGCCCAGGAACACTACCCGATTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PRGRSVLCSTWRPLS*GAASCCPGTLPDSL Trigger: GAGTGAATCGGGTAGTGTTCCTGGGCAACATGAAGCGGCTCCTCACGACAGGGGTCTCCAGGTGGAACACAAGACAGATCGCCCTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS-3UTR CAA 90 bp | ACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGAAGCCGCCAGGAAGCGGGCGTaGACTGCACAGAAGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGVGQTVEVASRSLSGEAARKRA*TAQKWL Trigger: CAACCACTTCTGTGCAGTCAACGCCCGCTTCCTGGC...GGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | TGTAGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCAAGCAGTGCTCCCTGTaGGCCGCTTTCCCATACACG | + |
|
Preference number: 5 (lower is better) Translates to: CRGPKRCRIPELRAEGHFKQCSL*AAFPYT Trigger: CGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCTT...GAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | CCAGGGCTGGGGAAATCTCACCTCAGCTCGCCTGGAGGGCATCTGCAGTTGGGAATACCTTGGGGTAGTTaGGCTCGATTCTGCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLGKSHLSSPGGHLQLGIPWGS*ARFCLS Trigger: AGACAGGCAGAATCGAGCCAAACTACCCCAAGGTAT...TCCCAACTGCAGATGCCCTCCAGGCGAGCTGAGGTGAGATTTCCCCAGCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | AGGGCACTGAGTGTGAGAGCCTCAGCCTGCGTGTTGGCACTACTGGTGTTGGGCATGAAGGGGTTCCATTaGATGTCCAGCACGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RALSVRASACVLALLVLGMKGFH*MSSTLP Trigger: GGGCAACGTGCTGGACATCAAATGGAACCCCTTCAT...GCCCAACACCAGTAGTGCCAACACGCAGGCTGAGGCTCTCACACTCAGTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | CTGGCTCTTGGGGCTGCAAGGAGAAGCCGCAGCCAGTCAGGGGTGGGCTTTCCACAAGAGGCGATGATGTaGTCAATGAAGGGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LALGAARRSRSQSGVGFPQEAMM*SMKGFH Trigger: ATGGAACCCCTTCATTGACAACATCATCGCCTCTTG...TGGAAAGCCCACCCCTGACTGGCTGCGGCTTCTCCTTGCAGCCCCAAGAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | TTCTGGGGAAGCCCACAAGGGGATTGGCATCTCAATACAGTGGGAAGGGCCCTGCGCAGCTTCTTGTCCTaGCATGTGGTGGTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FWGSPQGDWHLNTVGRALRSFLS*HVVVSR Trigger: CCTGCTCACCACCACATGCAAGGACAAGAAGCTGCG...CAGGGCCCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS TCA 90 bp | CAGTTCTTGGGGTTGTTGCGCAGGTTTTTCAGTTCGAGCTGGAGCTaGCGGAGCCGGATGTCCTTCTGTGCCAGCTCCTCCTTCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QFLGLLRRFFSSSWS*RSRMSFCASSSFSL Trigger: AAGGCTGAAGGAGGAGCTGGCACAGAAGGACATCCGGCTCCGTCAGCTCCAGCTCGAACTGAAAAACCTGCGCAACAACCCCAAGAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGATCACACGCAGCTTCTaGTCCTTGCATGTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPKRCRIPELRAEGHFLITRSF*SLHVVV Trigger: CACCACCACATGCAAGGACAAGAAGCTGCGTGTGAT...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS TCA 90 bp | GAGCTGCCTTCCAAGCCTGAAGCTCACAGTGGCAACATAAAGGCCTaGCTCTTCCTGAGGTGTGGGGGACACTCTGCAGCCTTACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ELPSKPEAHSGNIKA*LFLRCGGHSAALPH Trigger: ATGAGGTAAGGCTGCAGAGTGTCCCCCACACCTCAGGAAGAGTCAGGCCTTTATGTTGCCACTGTGAGCTTCAGGCTTGGAAGGCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS CCA 90 bp | AGGAGCCGCTTCATGTTGCCCAGGAACACTACCCGATTCACTCTGTaGTTTTTGCAGTTTGCCTCCTGTAGAACACGGCCGGATCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSRFMLPRNTTRFTL*FLQFASCRTRPDRG Trigger: ACCCCGATCCGGCCGTGTTCTACAGGAGGCAAACTGCAAAAACCACAGAGTGAATCGGGTAGTGTTCCTGGGCAACATGAAGCGGCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS-3UTR CAA 90 bp | GGAAGCCATCTTGCTCTGCCTGCCCAAGGGCCAAACTCTATTCTTTCTCTCTGCAGGAGCCGCTTCATGTaGCCCAGGAACACTACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GSHLALPAQGPNSILSLCRSRFM*PRNTTR Trigger: TCGGGTAGTGTTCCTGGGCAACATGAAGCGGCTCCT...GCAGAGAGAAAGAATAGAGTTTGGCCCTTGGGCAGGCAGAGCAAGATGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | AGAGGACCAAAGAGATGCCGCATCCCAGAGCTGCGTGCAGAGGGCCATTTCCTGCAGTTCTTGGGGTTGTaGCGCAGGTTTTTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGPKRCRIPELRAEGHFLQFLGL*RRFFSS Trigger: CGAACTGAAAAACCTGCGCAACAACCCCAAGAACTG...CAGGAAATGGCCCTCTGCACGCAGCTCTGGGATGCGGCATCTCTTTGGTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS GCA 90 bp | GTTTTTCAGTTCGAGCTGGAGCTGACGGAGCCGGATGTCCTTCTGTaGCAGCTCCTCCTTCAGCCTTCGAATCTCATCCTGCTGCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VFQFELELTEPDVLL*QLLLQPSNLILLPK Trigger: TTTAGGCAGCAGGATGAGATTCGAAGGCTGAAGGAGGAGCTGGCACAGAAGGACATCCGGCTCCGTCAGCTCCAGCTCGAACTGAAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | AGGTCCCCACATCTCCTCTACCCAAAGGGCGGTGACTGTCCTGACACCAGTGCTTTGTCATGTACATTCTaGGTGATGGGGATCCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPHLLYPKGGDCPDTSALSCTF*VMGIPS Trigger: TGACGGGATCCCCATCACCAAGAATGTACATGACAA...AGCACTGGTGTCAGGACAGTCACCGCCCTTTGGGTAGAGGAGATGTGGGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | TTCTGGGGAAGCCCACAAGGGGATTGGCATCTCAATACAGTGGGAAGGGCCCTGTGTGGTTTTTGCAGTTaGCCTCCTGTAGAACACGGC | + |
|
Preference number: 5 (lower is better) Translates to: FWGSPQGDWHLNTVGRALCGFCS*PPVEHG Trigger: GCCGTGTTCTACAGGAGGCAAACTGCAAAAACCACA...CAGGGCCCTTCCCACTGTATTGAGATGCCAATCCCCTTGTGGGCTTCCCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | ACTGGTGTTGGGCAGACAGTGGAAGTGGCTTCCAGGTCTCTTTCTGGGGAAGCCTTCACTCTGTGGTTTTaGCAGTTTGCCTCCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGVGQTVEVASRSLSGEAFTLWF*QFASCR Trigger: TCTACAGGAGGCAAACTGCAAAAACCACAGAGTGAA...GGCTTCCCCAGAAAGAGACCTGGAAGCCACTTCCACTGTCTGCCCAACACCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS GCA 90 bp | TGGTTGTCATGTACATTCTTGGTGATGGGGATCCCGTCAAAGCAGTaGTCCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WLSCTFLVMGIPSKQ*SLLAAFPYTFRNLE Trigger: TTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCTTTGACGGGATCCCCATCACCAAGAATGTACATGACAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 ENSMUST00000173171.3 |
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| CDS CCA 90 bp | GGACATGCAGAGGATCACGTCGGTGTGGCAGTCAATCATTTTCACTaGCTCGCCTATGTCCAGGTTCCAGATGAGGACCTTGTAGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GHAEDHVGVAVNHFH*LAYVQVPDEDLVVI Trigger: TATGACTACAAGGTCCTCATCTGGAACCTGGACATAGGCGAGCCAGTGAAAATGATTGACTGCCACACCGACGTGATCCTCTGCATGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 ENSMUST00000174439.2 |
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| CDS-3UTR CAA 90 bp | TTCTGTCATTTGACAGGTAGGGACACTAATCCTTACTCTGCCTGCTTCACGAATACTGCACAGAAGTGGTaGTCATGTACATTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FCHLTGRDTNPYSACFTNTAQKW*SCTFLV Trigger: CACCAAGAATGTACATGACAACCACTTCTGTGCAGT...ATTCGTGAAGCAGGCAGAGTAAGGATTAGTGTCCCTACCTGTCAAATGACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | AGTTGGGAAGTTTTGCAGGGTGGGCAGGCAAGAAGTGTCCTATGTATAGCAGATAATAAATCTATGCCGTaGACGACAACGCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWEVLQGGQARSVLCIADNKSMP*TTTLFF Trigger: AAAGAAGAGCGTTGTCGTCAACGGCATAGATTTATT...ATCTGCTATACATAGGACACTTCTTGCCTGCCCACCCTGCAAAACTTCCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS-3UTR CAA 90 bp | ACAGATCTCTCTGACATCCCAGCTTCCAAGTTCATTCCAAGTCAGAGGCAAAGGAATAAATCTATGCCGTaGACGACAACGCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TDLSDIPASKFIPSQRQRNKSMP*TTTLFF Trigger: AAAGAAGAGCGTTGTCGTCAACGGCATAGATTTATT...CCTTTGCCTCTGACTTGGAATGAACTTGGAAGCTGGGATGTCAGAGAGATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS CCA 72 bp | TGCCACTCAACCAGCCCCACACGGCGGCTGTGTCCGTaGAGCTCCAGGAGCGCCTCGGTCATGTTCCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CHSTSPTRRLCP*SSRSASVMFRF Trigger: GAAGCGGAACATGACCGAGGCGCTCCTGGAGCTCCACGGACACAGCCGCCGTGTGGGGCTGGTTGAGTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS CCA 72 bp | CCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTTaGAACTGCGGTACTGCGGTCGCCAGGACATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PCWPLSHTRSET*NCGTAVARTSQ Trigger: CTGCGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173171.3 |
||
| CDS CAA 90 bp | AAGCAGTGCTCCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTaGGAACTGCGGTACTGCGGTCGCCAGGACATCGCAGTCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KQCSLLAAFPYTFRN*ELRYCGRQDIAVTR Trigger: CCGAGTGACTGCGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173171.3 |
||
| CDS TCA 72 bp | CGATCTGTCTTGTGTTCCACCTGGAGACCCCTGTCGTaGGGAGCCGCTTCATGTTGCCCAGGAACACTACCC | + |
|
Preference number: 6 (lower is better) Translates to: RSVLCSTWRPLS*GAASCCPGTLP Trigger: GGGTAGTGTTCCTGGGCAACATGAAGCGGCTCCTCACGACAGGGGTCTCCAGGTGGAACACAAGACAGATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS GCA 72 bp | CTCCCAGCCATTCATCAGGGGTCAGCGCTGGCTCTGTaGCTGGTGTCATGGGATAAATGTCCTCCTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPAIHQGSALAL*LVSWDKCPPGR Trigger: CCTACCAGGAGGACATTTATCCCATGACACCAGGCACAGAGCCAGCGCTGACCCCTGATGAATGGCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000131981.2 |
||
| CDS GCA 72 bp | TGGCCGCTTTCCCATACACGTTCCGAAACTTGGAACTaGGGTACTGCGGTCGCCAGGACATCGCAGTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: WPLSHTRSETWN*GTAVARTSQSL Trigger: GAGTGACTGCGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173171.3 |
||
| CDS CAA 72 bp | TCCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTaGGAACTGCGGTACTGCGGTCGCCAGGACATCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLAAFPYTFRN*ELRYCGRQDIA Trigger: TGCGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173171.3 |
||
| CDS GCA 72 bp | TTCCCATACACGTTCCGAAACTTGGAACTGCGGTACTaGGGTCGCCAGGACATCGCAGTCACTCGGGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: FPYTFRNLELRY*GRQDIAVTRVT Trigger: TGTCACCCGAGTGACTGCGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173171.3 |
||
| CDS CCA 72 bp | CCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTTaGAACTGCGGTACTGCGGTCGCCAGGACATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PCWPLSHTRSET*NCGTAVARTSL Trigger: CAAAGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS CAA 90 bp | AAGCAGTGCTCCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTaGGAACTGCGGTACTGCGGTCGCCAGGACATCTTTGTGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: KQCSLLAAFPYTFRN*ELRYCGRQDIFVTV Trigger: GACTGTCACAAAGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS GCA 72 bp | TGCCCAGGAACACTACCCGATTCACTCTGTGGTTTTTaGAGTTTGCCTCCTGTAGAACACGGCCGGATCGGG | + |
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Preference number: 6 (lower is better) Translates to: CPGTLPDSLCGF*SLPPVEHGRIG Trigger: CCCGATCCGGCCGTGTTCTACAGGAGGCAAACTGCAAAAACCACAGAGTGAATCGGGTAGTGTTCCTGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS CAA 72 bp | TCCCTGTTGGCCGCTTTCCCATACACGTTCCGAAACTaGGAACTGCGGTACTGCGGTCGCCAGGACATCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLLAAFPYTFRN*ELRYCGRQDIF Trigger: AAAGATGTCCTGGCGACCGCAGTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048043.12 |
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| CDS GCA 72 bp | TGTACATTCTTGGTGATGGGGATCCCGTCAAAGCAGTaGTCCCTGTTGGCCGCTTTCCCATACACGTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CTFLVMGIPSKQ*SLLAAFPYTFR Trigger: TCGGAACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCTTTGACGGGATCCCCATCACCAAGAATGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 ENSMUST00000173171.3 |
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| CDS CCA 72 bp | CAGTGGCAACATAAAGGCCTGACTCTTCCTGAGGTGTaGGGGACACTCTGCAGCCTTACCTCATTCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: QWQHKGLTLPEV*GTLCSLTSFSV Trigger: GACAGAGAATGAGGTAAGGCTGCAGAGTGTCCCCCACACCTCAGGAAGAGTCAGGCCTTTATGTTGCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131981.2 |
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| CDS CAA 72 bp | TTGGTGATGGGGATCCCGTCAAAGCAGTGCTCCCTGTaGGCCGCTTTCCCATACACGTTCCGAAACTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LVMGIPSKQCSL*AAFPYTFRNLE Trigger: TTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCTTTGACGGGATCCCCATCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 ENSMUST00000173171.3 |
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| CDS CAA 72 bp | TTGCCCAGGAACACTACCCGATTCACTCTGTGGTTTTaGCAGTTTGCCTCCTGTAGAACACGGCCGGATCGG | + |
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Preference number: 6 (lower is better) Translates to: LPRNTTRFTLWF*QFASCRTRPDR Trigger: CCGATCCGGCCGTGTTCTACAGGAGGCAAACTGCAAAAACCACAGAGTGAATCGGGTAGTGTTCCTGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS CAA 72 bp | GGAGGCCTGAGAGTCCATCAATTTCTTCTTCGATCATaGGCATGGACAGATCCTCCTGGTCCCAGAGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GGLRVHQFLLRS*AWTDPPGPRGR Trigger: TCGCCCTCTGGGACCAGGAGGATCTGTCCATGCCAATGATCGAAGAAGAAATTGATGGACTCTCAGGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS CAA 90 bp | TGTACATTCTTGGTGATGGGGATCCCGTCAAAGCAGTGCTCCCTGTaGGCCGCTTTCCCATACACGTTCCGAAACTTGGAACTGCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: CTFLVMGIPSKQCSL*AAFPYTFRNLELRY Trigger: GTACCGCAGTTCCAAGTTTCGGAACGTGTATGGGAAAGCGGCCAACAGGGAGCACTGCTTTGACGGGATCCCCATCACCAAGAATGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 ENSMUST00000173171.3 |
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| CDS CCA 72 bp | GAGGATCACGTCGGTGTGGCAGTCAATCATTTTCACTaGCTCGCCTATGTCCAGGTTCCAGATGAGGACCTT | + |
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Preference number: 6 (lower is better) Translates to: EDHVGVAVNHFH*LAYVQVPDEDL Trigger: AAGGTCCTCATCTGGAACCTGGACATAGGCGAGCCAGTGAAAATGATTGACTGCCACACCGACGTGATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 ENSMUST00000174439.2 |
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| CDS CCA 72 bp | ATTTCTTCTTCGATCATTGGCATGGACAGATCCTCCTaGTCCCAGAGGGCGATCTGTCTTGTGTTCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: ISSSIIGMDRSS*SQRAICLVFHL Trigger: CAGGTGGAACACAAGACAGATCGCCCTCTGGGACCAGGAGGATCTGTCCATGCCAATGATCGAAGAAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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| CDS CCA 72 bp | CTGAGAGTCCATCAATTTCTTCTTCGATCATTGGCATaGACAGATCCTCCTGGTCCCAGAGGGCGATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LRVHQFLLRSLA*TDPPGPRGRSV Trigger: GACAGATCGCCCTCTGGGACCAGGAGGATCTGTCCATGCCAATGATCGAAGAAGAAATTGATGGACTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048043.12 ENSMUST00000164246.9 |
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