Pregenerated sensors for CORO1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004530Ensembl transcript IDs: ENSMUST00000004646.13, ENSMUST00000164980.8
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATGGAATGTCTCCAAATGGCAGTGTCTCCCTCTCTGCCCTCCCTaGGAGTGCGCGGAGGAGGAGCAGCCACCGTCCGTGGAGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TWNVSKWQCLPLCPP*ECAEEEQPPSVEVG Trigger: GCCCACCTCCACGGACGGTGGCTGCTCCTCCTCCGCGCACTCCCAGGGAGGGCAGAGAGGGAGACACTGCCATTTGGAGACATTCCATGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | GGGAAGACAGGAGCGAGGGAAACAGAGGGCCTGGGGCAGAGGCTGTaGACACAGTGCCTGGGTTCAAGCCCCACACTATACCCAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: GKTGARETEGLGQRL*TQCLGSSPTLYPRA Trigger: GGCCCTTGGGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAGGCCCTCTGTTTCCCTCGCTCCTGTCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | CGAGGGAAACAGAGGGCCTGGGGCAGAGGCTGTGCACACAGTGCCTaGGTTCAAGCCCCACACTATACCCAAGGGCCAGGCAAGCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: RGKQRAWGRGCAHSA*VQAPHYTQGPGKLP Trigger: AGGCAGCTTGCCTGGCCCTTGGGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAGGCCCTCTGTTTCCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | TCCTCCGGTGCCACAGGGAAACAGAGGCCACCACAGCGTGTCAGGTaGGCACACACTACAGTCACTCCCGCCTCTCTCAACCACAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: SSGATGKQRPPQRVR*AHTTVTPASLNHSP Trigger: GGGGCTGTGGTTGAGAGAGGCGGGAGTGACTGTAGTGTGTGCCCACCTGACACGCTGTGGTGGCCTCTGTTTCCCTGTGGCACCGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR TCA 90 bp | CCTCCGCTGCAACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTaGGACAGGAGGCAGCAAAGTAAGGAGGGAAGACAGGAGCGAGGG | + |
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Preference number: 1 (lower is better) Translates to: PPLQHSRALEGWLGA*DRRQQSKEGRQERG Trigger: CCCTCGCTCCTGTCTTCCCTCCTTACTTTGCTGCCTCCTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTTGCAGCGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | ACAGATCTGACATGGAATGTCTCCAAATGGCAGTGTCTCCCTCTCTaGCCTCCCTGGGAGTGCGCGGAGGAGGAGCAGCCACCGTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: TDLTWNVSKWQCLPL*PPWECAEEEQPPSV Trigger: CACGGACGGTGGCTGCTCCTCCTCCGCGCACTCCCAGGGAGGGCAGAGAGGGAGACACTGCCATTTGGAGACATTCCATGTCAGATCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | TCAAGGGCGGCTTCCGGCCCTGCCGTGTCAGGGTACAGGTCGTCTTaGAAGAGGTCAGACTTCCTGGGGACCGTCATGATAATGGGCTCG | + |
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Preference number: 1 (lower is better) Translates to: SRAASGPAVSGYRSS*KRSDFLGTVMIMGS Trigger: CGAGCCCATTATCATGACGGTCCCCAGGAAGTCTGACCTCTTCCAAGACGACCTGTACCCTGACACGGCAGGGCCGGAAGCCGCCCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR TCA 90 bp | GTGGTGGGGCAGAGGGCCTGTGCGTGGCCAGCTATGGTCGATCTCTaGACTTCCCTTTCCACTCTGTTCTGGACCTTTCCCTCCGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: VVGQRACAWPAMVDL*TSLSTLFWTFPSAA Trigger: TGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAGGGAAGTTCAGAGATCGACCATAGCTGGCCACGCACAGGCCCTCTGCCCCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | GACCTTTCCCTCCGCTGCAACATTCAAGAGCCCTCGAGGGCTGGCTaGGCGCTTGAGACAGGAGGCAGCAAAGTAAGGAGGGAAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: DLSLRCNIQEPSRAG*ALETGGSKVRREDR Trigger: CCTGTCTTCCCTCCTTACTTTGCTGCCTCCTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTTGCAGCGGAGGGAAAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | AGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACATTTaGTGGCAGCCAGCACTGGGCCCACACCAGCACCAACACTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: SGCCHTMLCPDNLYI*WQPALGPHQHQHLP Trigger: TGGCAAGTGTTGGTGCTGGTGTGGGCCCAGTGCTGGCTGCCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | GGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACATTTGCTaGCAGCCAGCACTGGGCCCACACCAGCACCAACACTTGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: GCCHTMLCPDNLYIC*QPALGPHQHQHLPR Trigger: CCTTGGCAAGTGTTGGTGCTGGTGTGGGCCCAGTGCTGGCTGCCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | TCGCCTTGGGTGCCCTTGTCCAAACTGCCCGGAAGGGAACCACACTaGTGGAAGGGACAGGCACAACCATCTGTGGAGAACAAAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: SPWVPLSKLPGREPH*WKGQAQPSVENKTA Trigger: TGCAGTTTTGTTCTCCACAGATGGTTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCACCCAAGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | TCTCTGAACTTCCCTTTCCACTCTGTTCTGGACCTTTCCCTCCGCTaGAACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: SLNFPFHSVLDLSLR*NIQEPSRAGWALET Trigger: TGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTTGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAGGGAAGTTCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | ACATTTGCTGGCAGCCAGCACTGGGCCCACACCAGCACCAACACTTaGCAAGGCTTGCCTTTTGTGATCCATCTGACACTACCCAGGTCG | + |
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Preference number: 1 (lower is better) Translates to: TFAGSQHWAHTSTNT*QGLPFVIHLTLPRS Trigger: CGACCTGGGTAGTGTCAGATGGATCACAAAAGGCAAGCCTTGGCAAGTGTTGGTGCTGGTGTGGGCCCAGTGCTGGCTGCCAGCAAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | CCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTaGCCTGATAACCTGTACATTTGCTGGCAGCCAGCACTGGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: PVSPHTLSGCCHTML*PDNLYICWQPALGP Trigger: TGGGCCCAGTGCTGGCTGCCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | GTCTGTGGGCTTCTTGGGGGCACAGCTGAGCTCGCTCTTCTTGTTTaGAGCCGGCTTGCTGTCCAGGATGTTCTTCTTGACCACCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: VCGLLGGTAELALLV*SRLAVQDVLLDHLE Trigger: CTCAAGGTGGTCAAGAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAGCTGTGCCCCCAAGAAGCCCACAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | GGTTTTGGCAACATTAAAAAGGAAGAGACAGAGCAGAGGTGGCGCTaGCCCGGTCATCAGGTGTGTGAGGAGGACGCTGGGTCAAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: GFGNIKKEETEQRWR*PGHQVCEEDAGSSG Trigger: CCCACTTGACCCAGCGTCCTCCTCACACACCTGATGACCGGGCCAGCGCCACCTCTGCTCTGTCTCTTCCTTTTTAATGTTGCCAAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR TCA 90 bp | TCTTCCTTCTGCACAGTCGTTAGACTAACGCCCAGGTTTGTGCTGTaGGTGAGCCAGCCCTGTGCAGGCGGCTGCACTGATTGTTCTCGT | + |
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Preference number: 1 (lower is better) Translates to: SSFCTVVRLTPRFVL*VSQPCAGGCTDCSR Trigger: ACGAGAACAATCAGTGCAGCCGCCTGCACAGGGCTGGCTCACTCACAGCACAAACCTGGGCGTTAGTCTAACGACTGTGCAGAAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | CCTTGGGTGCCCTTGTCCAAACTGCCCGGAAGGGAACCACACTGCTaGAAGGGACAGGCACAACCATCTGTGGAGAACAAAACTGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: PWVPLSKLPGREPHC*KGQAQPSVENKTAE Trigger: TTCTGCAGTTTTGTTCTCCACAGATGGTTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCACCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | TTCTTGACCACCTTGAGGTCCCTGTTCTTGCCTGGAATGTACCCGTaGTTCAACGATATGAGGATGGGGTCCGCGTTCTTCCCCTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: FLTTLRSLFLPGMYP*FNDMRMGSAFFPSN Trigger: GTTTGAGGGGAAGAACGCGGACCCCATCCTCATATCGTTGAAGCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | CCGGAAGGGAACCACACTGCTGGAAGGGACAGGCACAACCATCTGTaGAGAACAAAACTGCAGAAACGCGAGCTAGTTCGGGTTAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: PEGNHTAGRDRHNHL*RTKLQKRELVRVRV Trigger: TACTCTAACCCGAACTAGCTCGCGTTTCTGCAGTTTTGTTCTCCACAGATGGTTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | GTCCAGGATGTTCTTCTTGACCACCTTGAGGTCCCTGTTCTTGCCTaGAATGTACCCGTGCTTCAACGATATGAGGATGGGGTCCGCGTT | + |
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Preference number: 1 (lower is better) Translates to: VQDVLLDHLEVPVLA*NVPVLQRYEDGVRV Trigger: AACGCGGACCCCATCCTCATATCGTTGAAGCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAACATCCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR TCA 90 bp | GATCGAAGACTCAATGGAATGGGGGCAGTGTGTGGTGGGTCCACGTaGTTTCTCAAGTCTTCCTTCTGCACAGTCGTTAGACTAACGCCC | + |
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Preference number: 1 (lower is better) Translates to: DRRLNGMGAVCGGST*FLKSSFCTVVRLTP Trigger: GGGCGTTAGTCTAACGACTGTGCAGAAGGAAGACTTGAGAAATCACGTGGACCCACCACACACTGCCCCCATTCCATTGAGTCTTCGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | TGCCGAACACCAAAGCTCCCTGACGAAAAGCTCAGCTTCCAGGTTTaGGGAAATTTGGGAGAGGAACCGAGTTCTTACTGGAATGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: CRTPKLPDEKLSFQV*GNLGEEPSSYWNVA Trigger: GGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAGCTTTTCGTCAGGGAGCTTTGGTGTTCGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | CAAAGCTCCCTGACGAAAAGCTCAGCTTCCAGGTTTGCGGAAATTTaGGAGAGGAACCGAGTTCTTACTGGAATGTGGCCTATCGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: QSSLTKSSASRFAEI*ERNRVLTGMWPIAG Trigger: GCCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAGCTTTTCGTCAGGGAGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | TTCTTACAACACTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTaGCATACTATGCTCTGCCCTGATAACCTGTACATTTGCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FLQHYPVSPHTLSGC*HTMLCPDNLYICWQ Trigger: CTGCCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTGTTGTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | AGCTTCCAGGTTTGCGGAAATTTGGGAGAGGAACCGAGTTCTTACTaGAATGTGGCCTATCGCTGGCTGACAGATCTGACATGGAATGTC | + |
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Preference number: 1 (lower is better) Translates to: SFQVCGNLGEEPSSY*NVAYRWLTDLTWNV Trigger: GACATTCCATGTCAGATCTGTCAGCCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | CAAGGAGAGAGAGAGACAGGACTTTTGATCGAAGACTCAATGGAATaGGGGCAGTGTGTGGTGGGTCCACGTGATTTCTCAAGTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QGERETGLLIEDSME*GQCVVGPRDFSSLP Trigger: AGGAAGACTTGAGAAATCACGTGGACCCACCACACACTGCCCCCATTCCATTGAGTCTTCGATCAAAAGTCCTGTCTCTCTCTCTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR GCA 90 bp | CTTTTCTTACAACACTACCCAGTCAGTCCACACACTCTAAGCGGCTaGTGCCATACTATGCTCTGCCCTGATAACCTGTACATTTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LFLQHYPVSPHTLSG*CHTMLCPDNLYICW Trigger: CCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTGTTGTAAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CCA 90 bp | AATTTGGGAGAGGAACCGAGTTCTTACTGGAATGTGGCCTATCGCTaGCTGACAGATCTGACATGGAATGTCTCCAAATGGCAGTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: NLGEEPSSYWNVAYR*LTDLTWNVSKWQCL Trigger: GAGACACTGCCATTTGGAGACATTCCATGTCAGATCTGTCAGCCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR TCA 90 bp | GACTTCCTGGGGACCGTCATGATAATGGGCTCGCACTTTCTCTCATaGAGCTTGAAGAATCTGGCAATTTCACACTTGTTGACGTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: DFLGTVMIMGSHFLS*SLKNLAISHLLTSR Trigger: CCTTGACGTCAACAAGTGTGAAATTGCCAGATTCTTCAAGCTTCATGAGAGAAAGTGCGAGCCCATTATCATGACGGTCCCCAGGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR TCA 90 bp | GCCATCTTCGCCAGCTGCTGCTCCAACTTGGAAATGCGCTCGTCTTaGCTGCAGATTGTTTCCTTTATGGATTTGATCTCTTTCAGAATC | + |
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Preference number: 1 (lower is better) Translates to: AIFASCCSNLEMRSS*LQIVSFMDLISFRI Trigger: GATTCTGAAAGAGATCAAATCCATAAAGGAAACAATCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGCAGCAGCTGGCGAAGATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGTGGCTGAGAGAACCTGCCCTCCCTGGGAGTaGGCGGAGGAGGAGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RSPEASEPAAPISVAERTCPPWE*AEEEQP Trigger: TGGCTGCTCCTCCTCCGCGCACTCCCAGGGAGGGCA...GGTTCTCTCAGCCACCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGTGGCTGAGAGAACCCCCTTGGAGCAGGCATaGCCAGGGCACGTCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RSPEASEPAAPISVAERTPLEQA*PGHVQC Trigger: GCACTGGACGTGCCCTGGGCATGCCTGCTCCAAGGG...GGTTCTCTCAGCCACCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGCCCTTGGAGCAGGCATaGCCAGGGCACGTCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TYRDSGAPKLRSQRPPSRPLEQA*PGHVQC Trigger: GCACTGGACGTGCCCTGGGCATGCCTGCTCCAAGGG...CCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCAGTGTCTCCCTCTCTaGCCTCCCTGGGAGTGCGCG | + |
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Preference number: 2 (lower is better) Translates to: TQKPTETQEPRSFGASGPQCLPL*PPWECA Trigger: CGCGCACTCCCAGGGAGGGCAGAGAGGGAGACACTG...GGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCGGTTTGTGCTGTGAGTaGGCCAGCCCTGTGCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: RNLQRLRSPEASEPAAPIGLCCE*ASPVQA Trigger: CGCCTGCACAGGGCTGGCTCACTCACAGCACAAACC...GATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGGGCAGAGGCTGTGCACACAGTGCCTGGGTTCAAGCCCCACACTATACCGGTTTGTGCTGTGAGTaGGCCAGCCCTGTGCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: AWGRGCAHSAWVQAPHYTGLCCE*ASPVQA Trigger: CGCCTGCACAGGGCTGGCTCACTCACAGCACAAACC...GGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCAGAGGGCCTGTGCGTGGCCAGCTATGGTCGATCTCTGAACTTCCCTTTTGCCCTCCCTGGGAGTaGGCGGAGGAGGAGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: WGRGPVRGQLWSISELPFCPPWE*AEEEQP Trigger: TGGCTGCTCCTCCTCCGCGCACTCCCAGGGAGGGCA...AAAGGGAAGTTCAGAGATCGACCATAGCTGGCCACGCACAGGCCCTCTGCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGCTGGCAAGTAGCAGCCTGATCTGGGTGGTGGGGCAGAGGGCCTGTGCGCTAAGGTCTAGCTGCTaGCCTTGGAGCAGGCATGCC | + |
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Preference number: 2 (lower is better) Translates to: PVLASSSLIWVVGQRACALRSSC*PWSRHA Trigger: GGCATGCCTGCTCCAAGGGCAGCAGCTAGACCTTAG...CGCACAGGCCCTCTGCCCCACCACCCAGATCAGGCTGCTACTTGCCAGCACTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGCTGGCAAGTAGCAGCCTGATCTGGGTGGTGGGGCAGAGGGCCTGTGCGAGGGAACCACACTGCTaGAAGGGACAGGCACAACCA | + |
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Preference number: 2 (lower is better) Translates to: PVLASSSLIWVVGQRACAREPHC*KGQAQP Trigger: TGGTTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCT...CGCACAGGCCCTCTGCCCCACCACCCAGATCAGGCTGCTACTTGCCAGCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CAA 90 bp | CTCAAGGGCGGCTTCCGGCCCTGCCGTGTCAGGGTACAGGTCGTCTaGGAAGAGGTCAGACTTCCTGGGGACCGTCATGATAATGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LKGGFRPCRVRVQVV*EEVRLPGDRHDNGL Trigger: GAGCCCATTATCATGACGGTCCCCAGGAAGTCTGACCTCTTCCAAGACGACCTGTACCCTGACACGGCAGGGCCGGAAGCCGCCCTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | CTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCCAGTGTCTCCCTCTCTaGCCTCCCTGGGAGTGCGCG | + |
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Preference number: 2 (lower is better) Translates to: LPSQSTHSKRLLPYYALPQCLPL*PPWECA Trigger: CGCGCACTCCCAGGGAGGGCAGAGAGGGAGACACTG...GGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGGAAGACTCAATGGAATaGGGGCAGTGTGTGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TYRDSGAPKLRSQRPPSREDSME*GQCVVG Trigger: ACCCACCACACACTGCCCCCATTCCATTGAGTCTTC...CCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAAACAGAGGCCACCACAGCGTGTCAGGTGGGCACACACTACAGTCACTCCCCAGGTTTGTGCTGTaGGTGAGCCAGCCCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QGNRGHHSVSGGHTLQSLPRFVL*VSQPCA Trigger: TGCACAGGGCTGGCTCACTCACAGCACAAACCTGGG...GAGTGACTGTAGTGTGTGCCCACCTGACACGCTGTGGTGGCCTCTGTTTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGGCTATGGTCGATCTCTaGACTTCCCTTTCCACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TYRDSGAPKLRSQRPPSRAMVDL*TSLSTL Trigger: CAGAGTGGAAAGGGAAGTTCAGAGATCGACCATAGC...CCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCGGAAGGGAACCACACTaGTGGAAGGGACAGGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: RNLQRLRSPEASEPAAPIGREPH*WKGQAQ Trigger: TTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCC...GATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCCTGGGGCAGAGGCTGTGCACACAGTGCCTGGGTTCAAGCCCCACACTATAAGGGAACCACACTGCTaGAAGGGACAGGCACAACCA | + |
|
Preference number: 2 (lower is better) Translates to: GPGAEAVHTVPGFKPHTIREPHC*KGQAQP Trigger: TGGTTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCT...TATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCCTTTCCACTCTGTTCTaGACCTTTCCCTCCGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HRNLQRLRSPEASEPAAPLSTLF*TFPSAA Trigger: TGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAG...GGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CAA 90 bp | GCCGTGTCTGTGGGCTTCTTGGGGGCACAGCTGAGCTCGCTCTTCTaGTTTGCAGCCGGCTTGCTGTCCAGGATGTTCTTCTTGACCACC | + |
|
Preference number: 2 (lower is better) Translates to: AVSVGFLGAQLSSLF*FAAGLLSRMFFLTT Trigger: GGTGGTCAAGAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAGCTGTGCCCCCAAGAAGCCCACAGACACGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCTCCCACATAAGTAGATaGTGCTGGTGTCCGGATCGT | + |
|
Preference number: 2 (lower is better) Translates to: HRNLQRLRSPEASEPAAPSHISR*CWCPDR Trigger: ACGATCCGGACACCAGCATCATCTACTTATGTGGGA...GGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCGAAGACTCAATGGAATaGGGGCAGTGTGTGGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: TQKPTETQEPRSFGASGPEDSME*GQCVVG Trigger: ACCCACCACACACTGCCCCCATTCCATTGAGTCTTC...GGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACAACACTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGAGCAGCCACCGTCCGTaGAGGTGGGCGGGCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LQHYPVSPHTLSGCCHTMSSHRP*RWAGLR Trigger: CCTGAGGCCCGCCCACCTCCACGGACGGTGGCTGCT...CATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTGTTGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CAA 90 bp | TCCAACTTGGCTTCGTTTTGCACACTGGCCGTGTCTGTGGGCTTCTaGGGGGCACAGCTGAGCTCGCTCTTCTTGTTTGCAGCCGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SNLASFCTLAVSVGF*GAQLSSLFLFAAGL Trigger: CAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAGCTGTGCCCCCAAGAAGCCCACAGACACGGCCAGTGTGCAAAACGAAGCCAAGTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACGGCTGGCTGGGCGCTTaGGACAGGAGGCAGCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYGWLGA*DRRQQS Trigger: ACTTTGCTGCCTCCTGTCTCAAGCGCCCAGCCAGCC...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGAAACAGAGGCCACCACAGCGTGTCAGGTGGGCACACACTACAGTCACTCGGAAGGGAACCACACTaGTGGAAGGGACAGGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: QGNRGHHSVSGGHTLQSLGREPH*WKGQAQ Trigger: TTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCC...GAGTGACTGTAGTGTGTGCCCACCTGACACGCTGTGGTGGCCTCTGTTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACAGTAGCAGCCTGATCTaGGTGGTGGGGCAGAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYSSSLI*VVGQRA Trigger: GGCCCTCTGCCCCACCACCCAGATCAGGCTGCTACT...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACCACTGGCCGTGTCTGTaGGCTTCTTGGGGGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYHWPCL*ASWGHS Trigger: GCTGTGCCCCCAAGAAGCCCACAGACACGGCCAGTG...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCCCCATCTCGGTGGCTGAGAGAACCTTTTCTTACAACACTACCCAGTCAGTCCTGGGGCAGAGGCTGTaGACACAGTGCCTGGGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: APISVAERTFSYNTTQSVLGQRL*TQCLGS Trigger: TGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAG...GACTGACTGGGTAGTGTTGTAAGAAAAGGTTCTCTCAGCCACCGAGATGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACCTGGGGCAGAGGCTGTaGACACAGTGCCTGGGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYLGQRL*TQCLGS Trigger: TGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAG...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGTGCCATACTATGCTCTaGCCTGATAACCTGTACATT | + |
|
Preference number: 2 (lower is better) Translates to: TYRDSGAPKLRSQRPPSRCHTML*PDNLYI Trigger: AATGTACAGGTTATCAGGGCAGAGCATAGTATGGCA...CCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCCTGGAATGTACCCGTaGTTCAACGATATGAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: TQKPTETQEPRSFGASGPPGMYP*FNDMRM Trigger: CATCCTCATATCGTTGAAGCACGGGTACATTCCAGG...GGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CAA 90 bp | TTCTTGGGGGCACAGCTGAGCTCGCTCTTCTTGTTTGCAGCCGGCTaGCTGTCCAGGATGTTCTTCTTGACCACCTTGAGGTCCCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: FLGAQLSSLFLFAAG*LSRMFFLTTLRSLF Trigger: GAACAGGGACCTCAAGGTGGTCAAGAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAGCTGTGCCCCCAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAAACAGAGGCCACCACAGCGTGTCAGGTGGGCACACACTACAGTCACTCACCAGCACCAACACTTaGCAAGGCTTGCCTTTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QGNRGHHSVSGGHTLQSLTSTNT*QGLPFV Trigger: CACAAAAGGCAAGCCTTGGCAAGTGTTGGTGCTGGT...GAGTGACTGTAGTGTGTGCCCACCTGACACGCTGTGGTGGCCTCTGTTTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CAA 90 bp | TCGCTCTTCTTGTTTGCAGCCGGCTTGCTGTCCAGGATGTTCTTCTaGACCACCTTGAGGTCCCTGTTCTTGCCTGGAATGTACCCGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLFLFAAGLLSRMFF*TTLRSLFLPGMYPC Trigger: GCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAAGAAGAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | AACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTGAGACAGGAGGCAGCAAACTCAGCTTCCAGGTTTaGGGAAATTTGGGAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NIQEPSRAGWALETGGSKLSFQV*GNLGEE Trigger: TTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAG...TTTGCTGCCTCCTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCTGCCATACTATGCTCTaGCCTGATAACCTGTACATT | + |
|
Preference number: 2 (lower is better) Translates to: TQKPTETQEPRSFGASGPCHTML*PDNLYI Trigger: AATGTACAGGTTATCAGGGCAGAGCATAGTATGGCA...GGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR CCA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACGGGGGCAGTGTGTGGTaGGTCCACGTGATTTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYGGSVW*VHVISQ Trigger: TTGAGAAATCACGTGGACCCACCACACACTGCCCCC...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCAGGCACAACCATCTGTaGAGAACAAAACTGCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TQKPTETQEPRSFGASGPRHNHL*RTKLQK Trigger: TTTCTGCAGTTTTGTTCTCCACAGATGGTTGTGCCT...GGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR TCA 90 bp | AGACAATGCAGTGTGAGTCATTCCAGCCATGGTCTCTCCATCTCCTTATCCAACCCCAGGTTTGTGCTGTaGGTGAGCCAGCCCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RQCSVSHSSHGLSISLSNPRFVL*VSQPCA Trigger: TGCACAGGGCTGGCTCACTCACAGCACAAACCTGGG...GTTGGATAAGGAGATGGAGAGACCATGGCTGGAATGACTCACACTGCATTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR TCA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACCAACCACAGCCCCTCTaGCTTCATCAACAGCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYQPQPL*LHQQPL Trigger: TAGAGGCTGTTGATGAAGTCAGAGGGGCTGTGGTTG...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CAA 90 bp | CCAAAGCTCCCTGACGAAAAGCTCAGCTTCCAGGTTTGCGGAAATTaGGGAGAGGAACCGAGTTCTTACTGGAATGTGGCCTATCGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PKLPDEKLSFQVCGN*GEEPSSYWNVAYRW Trigger: CCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAGCTTTTCGTCAGGGAGCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CAA 90 bp | TTGCTGTCCAGGATGTTCTTCTTGACCACCTTGAGGTCCCTGTTCTaGCCTGGAATGTACCCGTGCTTCAACGATATGAGGATGGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLSRMFFLTTLRSLF*PGMYPCFNDMRMGS Trigger: GGACCCCATCCTCATATCGTTGAAGCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAACATCCTGGACAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR CAA 90 bp | TTGTTTGCAGCCGGCTTGCTGTCCAGGATGTTCTTCTTGACCACCTaGAGGTCCCTGTTCTTGCCTGGAATGTACCCGTGCTTCAACGAT | + |
|
Preference number: 2 (lower is better) Translates to: LFAAGLLSRMFFLTT*RSLFLPGMYPCFND Trigger: ATCGTTGAAGCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACTGGGCCCACACCAGCACCAACACTTGCCAAGGCTTGCCTTTTGTGATGAAATGCGCTCGTCTTaGCTGCAGATTGTTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PALGPHQHQHLPRLAFCDEMRSS*LQIVSF Trigger: AAAGGAAACAATCTGCAGTCAAGACGAGCGCATTTC...ATCACAAAAGGCAAGCCTTGGCAAGTGTTGGTGCTGGTGTGGGCCCAGTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | CTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGCGCTCGTCTTGACTaGAGATTGTTTCCTTTATGG | + |
|
Preference number: 2 (lower is better) Translates to: LPSQSTHSKRLLPYYALPCARLD*RLFPLW Trigger: CCATAAAGGAAACAATCTGCAGTCAAGACGAGCGCA...GGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCGGCCCCCATCTCGGTGGCTGAGAGAACCTTTTCTTACAACACTACCCAGGTTTGCGGAAATTTaGGAGAGGAACCGAGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SQRPPSRWLREPFLTTLPRFAEI*ERNRVL Trigger: AAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCT...GGGTAGTGTTGTAAGAAAAGGTTCTCTCAGCCACCGAGATGGGGGCCGCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR CCA 90 bp | GTAATTAATTCAACGGACCCCAGAACCTTTGTGAATCTTCACACAGTCCTCAGCAGTAGCAGCCTGATCTaGGTGGTGGGGCAGAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: VINSTDPRTFVNLHTVLSSSSLI*VVGQRA Trigger: GGCCCTCTGCCCCACCACCCAGATCAGGCTGCTACT...GCTGAGGACTGTGTGAAGATTCACAAAGGTTCTGGGGTCCGTTGAATTAATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR CAA 90 bp | CAACTTCTAGGAGAGAGAGAGCAAGGAGAGAGAGAGACAGGACTTTaGATCGAAGACTCAATGGAATGGGGGCAGTGTGTGGTGGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QLLGEREQGERETGL*IEDSMEWGQCVVGP Trigger: TGGACCCACCACACACTGCCCCCATTCCATTGAGTCTTCGATCAAAAGTCCTGTCTCTCTCTCTCCTTGCTCTCTCTCTCCTAGAAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| 3UTR-3UTR GCA 90 bp | TTACAACACTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGGATAACCTGTACATTTaGTGGCAGCCAGCACTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LQHYPVSPHTLSGCCHTMDNLYI*WQPALG Trigger: GCCCAGTGCTGGCTGCCAGCAAATGTACAGGTTATC...CATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTGTTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAGAACCTTTGTGAATCTTCACACAGTCCTCAGCGTAGCACACGTACAGACGAACCGAGTTCTTACTaGAATGTGGCCTATCGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PQNLCESSHSPQRSTRTDEPSSY*NVAYRW Trigger: CCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTC...GTCTGTACGTGTGCTACGCTGAGGACTGTGTGAAGATTCACAAAGGTTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCGGTGGCTGAGAGAACCTTTTCTTACAACACTACCCAGTCAGTCCACACAGGGGGCAGTGTGTGGTaGGTCCACGTGATTTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ISVAERTFSYNTTQSVHTGGSVW*VHVISQ Trigger: TTGAGAAATCACGTGGACCCACCACACACTGCCCCC...TGTGTGGACTGACTGGGTAGTGTTGTAAGAAAAGGTTCTCTCAGCCACCGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCTGAAAACGGAAGCGAGTGTTTTGACAGAACACTATGGCCACTCTATAAGTCTAGCTGCTGCCCTTaGAGCAGGCATGCCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ISENGSECFDRTLWPLYKSSCCP*SRHAQG Trigger: GCCCTGGGCATGCCTGCTCCAAGGGCAGCAGCTAGA...CTTATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCACACGTACAGACAATGCAGTGTGAGTCATTCCAGCCATGGTCTCTCCATGCTCCAACTTGGAAATaGGCTCGTCTTGACTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: VAHVQTMQCESFQPWSLHAPTWK*ARLDCR Trigger: TCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGC...ATGGAGAGACCATGGCTGGAATGACTCACACTGCATTGTCTGTACGTGTGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTTCCAGGTTTGCGGAAATTTGGGAGAGGAACCGAGTTCTTACTGGAATGTATCTTCGCCAGCTGCTaGTCCAACTTGGAAATGCGC | + |
|
Preference number: 2 (lower is better) Translates to: QLPGLRKFGRGTEFLLECIFASC*SNLEMR Trigger: GCGCATTTCCAAGTTGGAGCAGCAGCTGGCGAAGAT...ACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTTTCCACTCTGTTCTGGACCTTTCCCTCCGCTGCAACATTCAAGAGCCCTGAATCTCATCCAACTTaGCTTCGTTTTGCACACTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLSTLFWTFPSAATFKSPESHPT*LRFAHW Trigger: CCAGTGTGCAAAACGAAGCCAAGTTGGATGAGATTC...AGGGCTCTTGAATGTTGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCGGTGGCTGAGAGAACCTTTTCTTACAACACTACCCAGTCAGTCCACACAACCAGCACCAACACTTaGCAAGGCTTGCCTTTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: ISVAERTFSYNTTQSVHTTSTNT*QGLPFV Trigger: CACAAAAGGCAAGCCTTGGCAAGTGTTGGTGCTGGT...TGTGTGGACTGACTGGGTAGTGTTGTAAGAAAAGGTTCTCTCAGCCACCGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTAATTCAACGGACCCCAGAACCTTTGTGAATCTTCACACAGTCCTCAGCGTAGCTATGGTCGATCTCTaGACTTCCCTTTCCACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: INSTDPRTFVNLHTVLSVAMVDL*TSLSTL Trigger: CAGAGTGGAAAGGGAAGTTCAGAGATCGACCATAGC...TACGCTGAGGACTGTGTGAAGATTCACAAAGGTTCTGGGGTCCGTTGAATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATCCAACATTAAACCACAAGACAGACACAGAAACCTACAGAGACTCAGGAGCCAACCACAGCCCCTCTaGCTTCATCAACAGCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LSNIKPQDRHRNLQRLRSQPQPL*LHQQPL Trigger: TAGAGGCTGTTGATGAAGTCAGAGGGGCTGTGGTTG...GCTCCTGAGTCTCTGTAGGTTTCTGTGTCTGTCTTGTGGTTTAATGTTGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCACACGTACAGACAATGCAGTGTGAGTCATTCCAGCCATGGTCTCTCCATAGGCACAACCATCTGTaGAGAACAAAACTGCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VAHVQTMQCESFQPWSLHRHNHL*RTKLQK Trigger: TTTCTGCAGTTTTGTTCTCCACAGATGGTTGTGCCT...ATGGAGAGACCATGGCTGGAATGACTCACACTGCATTGTCTGTACGTGTGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CAA 90 bp | AGCCATCTTCGCCAGCTGCTGCTCCAACTTGGAAATGCGCTCGTCTaGACTGCAGATTGTTTCCTTTATGGATTTGATCTCTTTCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SHLRQLLLQLGNALV*TADCFLYGFDLFQN Trigger: ATTCTGAAAGAGATCAAATCCATAAAGGAAACAATCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGCAGCAGCTGGCGAAGATGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTTATCCAACATTAAACCACAAGACAGACACAGAAACCTACAGAGACTCAGGAAATGTGGCCTATCGCTaGCTGACAGATCTGACATGG | + |
|
Preference number: 2 (lower is better) Translates to: PYPTLNHKTDTETYRDSGNVAYR*LTDLTW Trigger: CCATGTCAGATCTGTCAGCCAGCGATAGGCCACATT...TCCTGAGTCTCTGTAGGTTTCTGTGTCTGTCTTGTGGTTTAATGTTGGATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTTATCCAACATTAAACCACAAGACAGACACAGAAACCTACAGAGACTCAGGAGAACCGAGTTCTTACTaGAATGTGGCCTATCGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PYPTLNHKTDTETYRDSGEPSSY*NVAYRW Trigger: CCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTC...TCCTGAGTCTCTGTAGGTTTCTGTGTCTGTCTTGTGGTTTAATGTTGGATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTATCTCTGAAAACGGAAGCGAGTGTTTTGACAGAACACTATGGCCACTCTATTGGAATGTCTCCAAATaGCAGTGTCTCCCTCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: FISENGSECFDRTLWPLYWNVSK*QCLPLC Trigger: GCAGAGAGGGAGACACTGCCATTTGGAGACATTCCA...ATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGAGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCTGAAAACGGAAGCGAGTGTTTTGACAGAACACTATGGCCACTCTATAAGGAGTCATTCCAGCCATaGTCTCTCCATCTCCTTATC | + |
|
Preference number: 2 (lower is better) Translates to: ISENGSECFDRTLWPLYKESFQP*SLHLLI Trigger: GATAAGGAGATGGAGAGACCATGGCTGGAATGACTC...CTTATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCTGAAAACGGAAGCGAGTGTTTTGACAGAACACTATGGCCACTCTATAAGATGGGGATTCATCCGTaGTCTCAAAATAGCGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: ISENGSECFDRTLWPLYKMGIHP*SQNSGY Trigger: GTATCCGCTATTTTGAGATCACGGATGAATCCCCAT...CTTATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTCTCTAAAATTCAGAACATCTGGCATTTCAAACGTAGGAAAGCTCAGCAAAATGTGGCCTATCGCTaGCTGACAGATCTGACATGG | + |
|
Preference number: 2 (lower is better) Translates to: LVSKIQNIWHFKRRKAQQNVAYR*LTDLTW Trigger: CCATGTCAGATCTGTCAGCCAGCGATAGGCCACATT...TTGCTGAGCTTTCCTACGTTTGAAATGCCAGATGTTCTGAATTTTAGAGACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTCTCTAAAATTCAGAACATCTGGCATTTCAAACGTAGGAAAGCTCAGCAAGAGGTAGTGGACATATaGGGATTCATCCGTGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: LVSKIQNIWHFKRRKAQQEVVDI*GFIRDL Trigger: GAGATCACGGATGAATCCCCATATGTCCACTACCTC...TTGCTGAGCTTTCCTACGTTTGAAATGCCAGATGTTCTGAATTTTAGAGACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | CCTGGGAGTGCGCGGAGGAGGAGCAGCCACCGTCCGTaGAGGTGGGCGGGCCTCAGGCAGCCATCTTCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PGSARRRSSHRP*RWAGLRQPSSP Trigger: TGGCGAAGATGGCTGCCTGAGGCCCGCCCACCTCCACGGACGGTGGCTGCTCCTCCTCCGCGCACTCCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | AGTGCGCGGAGGAGGAGCAGCCACCGTCCGTGGAGGTaGGCGGGCCTCAGGCAGCCATCTTCGCCAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SARRRSSHRPWR*AGLRQPSSPAA Trigger: AGCAGCTGGCGAAGATGGCTGCCTGAGGCCCGCCCACCTCCACGGACGGTGGCTGCTCCTCCTCCGCGCACT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | TGCCCAGGGCACGTCCAGTGCTGGCAAGTAGCAGCCTaGTCTGGGTGGTGGGGCAGAGGGCCTGTGCGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPGHVQCWQVAA*SGWWGRGPVRG Trigger: GCCACGCACAGGCCCTCTGCCCCACCACCCAGATCAGGCTGCTACTTGCCAGCACTGGACGTGCCCTGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | CAGAGGGCCTGGGGCAGAGGCTGTGCACACAGTGCCTaGGTTCAAGCCCCACACTATACCCAAGGGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QRAWGRGCAHSA*VQAPHYTQGPG Trigger: GCCTGGCCCTTGGGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAGGCCCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTGGGGCAGAGGCTGTGCACACAGTGCCTGGGTTCAAGCCCCACACTATACTGAGCTCGCTCTTCTaGTTTGCAGCCGGCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GPGAEAVHTVPGFKPHTILSSLF*FAAGLL Trigger: CAGCAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAG...TATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | ACATGGAATGTCTCCAAATGGCAGTGTCTCCCTCTCTaGCCTCCCTGGGAGTGCGCGGAGGAGGAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TWNVSKWQCLPL*PPWECAEEEQP Trigger: TGGCTGCTCCTCCTCCGCGCACTCCCAGGGAGGGCAGAGAGGGAGACACTGCCATTTGGAGACATTCCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | GGCTGTGAGGTTAGAGTAGGGCTAAGGTCTAGCTGCTaGCCTTGGAGCAGGCATGCCCAGGGCACGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GCEVRVGLRSSC*PWSRHAQGTSS Trigger: ACTGGACGTGCCCTGGGCATGCCTGCTCCAAGGGCAGCAGCTAGACCTTAGCCCTACTCTAACCTCACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | GCCACAGGGAAACAGAGGCCACCACAGCGTGTCAGGTaGGCACACACTACAGTCACTCCCGCCTCTCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ATGKQRPPQRVR*AHTTVTPASLN Trigger: GTTGAGAGAGGCGGGAGTGACTGTAGTGTGTGCCCACCTGACACGCTGTGGTGGCCTCTGTTTCCCTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCACTGGGCCCACACCAGCACCAACACTTGCCAAGGCTTGCCTTTTGTGATTCGCCTTGGGTGCCCTaGTCCAAACTGCCCGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PALGPHQHQHLPRLAFCDSPWVP*SKLPGR Trigger: CCTTCCGGGCAGTTTGGACAAGGGCACCCAAGGCGA...ATCACAAAAGGCAAGCCTTGGCAAGTGTTGGTGCTGGTGTGGGCCCAGTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | TTCCCTTTCCACTCTGTTCTGGACCTTTCCCTCCGCTaGAACATTCAAGAGCCCTCGAGGGCTGGCTGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: FPFHSVLDLSLR*NIQEPSRAGWA Trigger: CGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTTGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | GCTTCCGGCCCTGCCGTGTCAGGGTACAGGTCGTCTTaGAAGAGGTCAGACTTCCTGGGGACCGTCATGATA | + |
|
Preference number: 3 (lower is better) Translates to: ASGPAVSGYRSS*KRSDFLGTVMI Trigger: TATCATGACGGTCCCCAGGAAGTCTGACCTCTTCCAAGACGACCTGTACCCTGACACGGCAGGGCCGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACAGTGCCTGGGTTCAAGCCCCACACTATACCCAAGGGCCAGGCAAGCTGCTTGAGGTCCCTGTTCTaGCCTGGAATGTACCCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HTVPGFKPHTIPKGQASCLRSLF*PGMYPC Trigger: GCACGGGTACATTCCAGGCAAGAACAGGGACCTCAA...GCAGCTTGCCTGGCCCTTGGGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | TGCACAGTCGTTAGACTAACGCCCAGGTTTGTGCTGTaGGTGAGCCAGCCCTGTGCAGGCGGCTGCACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CTVVRLTPRFVL*VSQPCAGGCTD Trigger: ATCAGTGCAGCCGCCTGCACAGGGCTGGCTCACTCACAGCACAAACCTGGGCGTTAGTCTAACGACTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | CAACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTaGGACAGGAGGCAGCAAAGTAAGGAGGGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QHSRALEGWLGA*DRRQQSKEGRQ Trigger: CTGTCTTCCCTCCTTACTTTGCTGCCTCCTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | GTGCCCTTGTCCAAACTGCCCGGAAGGGAACCACACTaGTGGAAGGGACAGGCACAACCATCTGTGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VPLSKLPGREPH*WKGQAQPSVEN Trigger: GTTCTCCACAGATGGTTGTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | AGGACTGTCAACACACAGGTATCCGCTCGCCTTGGGTaGCCTTGTCCAAACTGCCCGGAAGGGAACCACACT | + |
|
Preference number: 3 (lower is better) Translates to: RTVNTQVSARLG*PCPNCPEGNHT Trigger: AGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCACCCAAGGCGAGCGGATACCTGTGTGTTGACAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | GCCCTGATAACCTGTACATTTGCTGGCAGCCAGCACTaGGCCCACACCAGCACCAACACTTGCCAAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ALITCTFAGSQH*AHTSTNTCQGL Trigger: CAAGCCTTGGCAAGTGTTGGTGCTGGTGTGGGCCCAGTGCTGGCTGCCAGCAAATGTACAGGTTATCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | CGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGTGGCTaGGAGAACCTTTTCTTACAACACTACCCAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSFGASGPHLGG*ENLFLQHYPVS Trigger: ACTGACTGGGTAGTGTTGTAAGAAAAGGTTCTCTCAGCCACCGAGATGGGGGCCGCTGGCTCCGAAGCTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCGCTGCAACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTGAGACAGAGAGAGACAGGACTTTaGATCGAAGACTCAATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSAATFKSPRGLAGRLRQRETGL*IEDSME Trigger: TTCCATTGAGTCTTCGATCAAAAGTCCTGTCTCTCT...CTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTTGCAGCGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCCACCAGCACCAACACTaGCCAAGGCTTGCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSQSTHSKRLLPYYALPHQHQH*PRLAFC Trigger: ACAAAAGGCAAGCCTTGGCAAGTGTTGGTGCTGGTG...GGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | TGCCATACTATGCTCTGCCCTGATAACCTGTACATTTaGTGGCAGCCAGCACTGGGCCCACACCAGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: CHTMLCPDNLYI*WQPALGPHQHQ Trigger: TTGGTGCTGGTGTGGGCCCAGTGCTGGCTGCCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | CTTCTTGGGGGCACAGCTGAGCTCGCTCTTCTTGTTTaGAGCCGGCTTGCTGTCCAGGATGTTCTTCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLGGTAELALLV*SRLAVQDVLLD Trigger: GTCAAGAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAGCTGTGCCCCCAAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | CATACTATGCTCTGCCCTGATAACCTGTACATTTGCTaGCAGCCAGCACTGGGCCCACACCAGCACCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: HTMLCPDNLYIC*QPALGPHQHQH Trigger: GTGTTGGTGCTGGTGTGGGCCCAGTGCTGGCTGCCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCAGAGAGACAGGACTTTaGATCGAAGACTCAATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RNLQRLRSPEASEPAAPIRETGL*IEDSME Trigger: TTCCATTGAGTCTTCGATCAAAAGTCCTGTCTCTCT...GATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGCACACAGTGCCTGGGTTCAAGCCCCACACTATACCCAAGGGCCAGGCAAGAATCTCATCCAACTaGGCTTCGTTTTGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: AVHTVPGFKPHTIPKGQARISSN*ASFCTL Trigger: CAGTGTGCAAAACGAAGCCAAGTTGGATGAGATTCT...TGCCTGGCCCTTGGGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | ACTACCCAGGTCGTCTGCTTCCATAGACACGCACCATaGGGCTGTGAGGTTAGAGTAGGGCTAAGGTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTQVVCFHRHAP*GCEVRVGLRSS Trigger: GCTAGACCTTAGCCCTACTCTAACCTCACAGCCTCATGGTGCGTGTCTATGGAAGCAGACGACCTGGGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTaGCCTGATAACCTGTACATTTGCTGGCAGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PHTLSGCCHTML*PDNLYICWQPA Trigger: TGCTGGCTGCCAGCAAATGTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | ACCTTGAGGTCCCTGTTCTTGCCTGGAATGTACCCGTaGTTCAACGATATGAGGATGGGGTCCGCGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLRSLFLPGMYP*FNDMRMGSAFF Trigger: GAAGAACGCGGACCCCATCCTCATATCGTTGAAGCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | CTCAGGCAGCCATCTTCGCCAGCTGCTGCTCCAACTTaGAAATGCGCTCGTCTTGACTGCAGATTGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRQPSSPAAAPT*KCARLDCRLFP Trigger: AGGAAACAATCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGCAGCAGCTGGCGAAGATGGCTGCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | TGTTCTTGCCTGGAATGTACCCGTGCTTCAACGATATaGGGATGGGGTCCGCGTTCTTCCCCTCAAACCACT | + |
|
Preference number: 3 (lower is better) Translates to: CSCLECTRASTI*GWGPRSSPQTT Trigger: AGTGGTTTGAGGGGAAGAACGCGGACCCCATCCTCATATCGTTGAAGCACGGGTACATTCCAGGCAAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | CAACACTACCCAGTCAGTCCACACACTCTAAGCGGCTaGTGCCATACTATGCTCTGCCCTGATAACCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QHYPVSPHTLSG*CHTMLCPDNLY Trigger: GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | AACCACACTGCTGGAAGGGACAGGCACAACCATCTGTaGAGAACAAAACTGCAGAAACGCGAGCTAGTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: NHTAGRDRHNHL*RTKLQKRELVR Trigger: CCGAACTAGCTCGCGTTTCTGCAGTTTTGTTCTCCACAGATGGTTGTGCCTGTCCCTTCCAGCAGTGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCTGAAAACGGAAGCGAGTGTTTTGACAGAACACTATGGCCACTCTATAAGTCGCCTTGGGTGCCCTaGTCCAAACTGCCCGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISENGSECFDRTLWPLYKSPWVP*SKLPGR Trigger: CCTTCCGGGCAGTTTGGACAAGGGCACCCAAGGCGA...CTTATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATTTGGGAGAGGAACCGAGTTCTTACTGGAATGTGGCCTATCGCTGGCTGTTCTTCTTGACCACCTaGAGGTCCCTGTTCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GNLGEEPSSYWNVAYRWLFFLTT*RSLFLP Trigger: AGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAA...CAGCCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTATCCAACATTAAACCACAAGACAGACACAGAAACCTACAGAGACTCAGGAGTGTCTGTGGGCTTCTaGGGGGCACAGCTGAGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PYPTLNHKTDTETYRDSGVSVGF*GAQLSS Trigger: CGAGCTCAGCTGTGCCCCCAAGAAGCCCACAGACAC...TCCTGAGTCTCTGTAGGTTTCTGTGTCTGTCTTGTGGTTTAATGTTGGATAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | CTCAATGGAATGGGGGCAGTGTGTGGTGGGTCCACGTaGTTTCTCAAGTCTTCCTTCTGCACAGTCGTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LNGMGAVCGGST*FLKSSFCTVVR Trigger: TCTAACGACTGTGCAGAAGGAAGACTTGAGAAATCACGTGGACCCACCACACACTGCCCCCATTCCATTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | CCAAAGCTCCCTGACGAAAAGCTCAGCTTCCAGGTTTaGGGAAATTTGGGAGAGGAACCGAGTTCTTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PKLPDEKLSFQV*GNLGEEPSSYW Trigger: CCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAGCTTTTCGTCAGGGAGCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | CACTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTaGCATACTATGCTCTGCCCTGATAACCTGTACATT | + |
|
Preference number: 3 (lower is better) Translates to: HYPVSPHTLSGC*HTMLCPDNLYI Trigger: AATGTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR GCA 72 bp | CAGCCATCTTCGCCAGCTGCTGCTCCAACTTGGAAATaGGCTCGTCTTGACTGCAGATTGTTTCCTTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: QPSSPAAAPTWK*ARLDCRLFPLW Trigger: CCATAAAGGAAACAATCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGCAGCAGCTGGCGAAGATGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | GTTCTTCTTGACCACCTTGAGGTCCCTGTTCTTGCCTaGAATGTACCCGTGCTTCAACGATATGAGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: VLLDHLEVPVLA*NVPVLQRYEDG Trigger: CCCATCCTCATATCGTTGAAGCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | GTTTGCGGAAATTTGGGAGAGGAACCGAGTTCTTACTaGAATGTGGCCTATCGCTGGCTGACAGATCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: VCGNLGEEPSSY*NVAYRWLTDLT Trigger: TGTCAGATCTGTCAGCCAGCGATAGGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | CTGACGAAAAGCTCAGCTTCCAGGTTTGCGGAAATTTaGGAGAGGAACCGAGTTCTTACTGGAATGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTKSSASRFAEI*ERNRVLTGMWP Trigger: AGGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAGCTTTTCGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCAAGCTACTTTCGGTTTaGGCAACATTAAAAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HYPVSPHTLSGCCHTMLCKLLSV*ATLKRK Trigger: CTTCCTTTTTAATGTTGCCAAAACCGAAAGTAGCTT...GCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | GCCAGCTGCTGCTCCAACTTGGAAATGCGCTCGTCTTaGCTGCAGATTGTTTCCTTTATGGATTTGATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASCCSNLEMRSS*LQIVSFMDLIS Trigger: AGAGATCAAATCCATAAAGGAAACAATCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGCAGCAGCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR TCA 72 bp | GGGACCGTCATGATAATGGGCTCGCACTTTCTCTCATaGAGCTTGAAGAATCTGGCAATTTCACACTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GTVMIMGSHFLS*SLKNLAISHLL Trigger: CAACAAGTGTGAAATTGCCAGATTCTTCAAGCTTCATGAGAGAAAGTGCGAGCCCATTATCATGACGGTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CCA 72 bp | TCTGAAAACGGAAGCGAGTGTTTTGACAGAACACTATaGCCACTCTATAAGAGTGGGTGTAGGAGCAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SENGSECFDRTL*PLYKSGCRSSS Trigger: TGAACTGCTCCTACACCCACTCTTATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTCTCCCTCTCTGCCCTCCCTGGGAGTGCGCGGAGGAGGAGCAGCCACCGTATCACAGCCTGCACTaGGAAGCACATTGCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QCLPLCPPWECAEEEQPPYHSLH*EAHCGP Trigger: CGGCCCGCAATGTGCTTCTCAGTGCAGGCTGTGATA...CGGTGGCTGCTCCTCCTCCGCGCACTCCCAGGGAGGGCAGAGAGGGAGACACTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR GCA 90 bp | ACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCTTGCGGGCCGTCGGGTaGCAGGCCACGATGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TQKPTETQEPRSFGASGPLRAVG*QATMPT Trigger: AGTTGGCATCGTGGCCTGGCACCCGACGGCCCGCAA...GGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCACTGGCCGTGTCTGTaGGCTTCTTGGGGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQKPTETQEPRSFGASGPHWPCL*ASWGHS Trigger: GCTGTGCCCCCAAGAAGCCCACAGACACGGCCAGTG...GGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR GCA 90 bp | CCCTCCGCTGCAACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTGAGACAGATTCGTCCCGTCTTGTaGAGAGGGAGCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSAATFKSPRGLAGRLRQIRPVL*RGSTRK Trigger: CTTCCTGGTGCTCCCTCTGCACAAGACGGGACGAAT...CTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTTGCAGCGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | GGCTTCCGGCCCTGCCGTGTCAGGGTACAGGTCGTCTaGGAAGAGGTCAGACTTCCTGGGGACCGTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFRPCRVRVQVV*EEVRLPGDRHD Trigger: ATCATGACGGTCCCCAGGAAGTCTGACCTCTTCCAAGACGACCTGTACCCTGACACGGCAGGGCCGGAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | TGTCAACACACAGGTATCCGCTCGCCTTGGGTGCCCTaGTCCAAACTGCCCGGAAGGGAACCACACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CQHTGIRSPWVP*SKLPGREPHCW Trigger: CCAGCAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCACCCAAGGCGAGCGGATACCTGTGTGTTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGTGGCTGAGAGAACCGTTTCCTGGGGTCAATaGCTCTCACTTTCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSPEASEPAAPISVAERTVSWGQ*LSLSCL Trigger: AAGACAAGAAAGTGAGAGTCATTGACCCCAGGAAAC...GGTTCTCTCAGCCACCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGGCAGAGGCTGTGCACACAGTGCCTGGGTTCAAGCCCCACACTATACCCATGTTTTTCTGCACTaGGAAGCACATTGCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AWGRGCAHSAWVQAPHYTHVFLH*EAHCGP Trigger: CGGCCCGCAATGTGCTTCTCAGTGCAGAAAAACATG...GGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTGCACAGCCTCTGCCCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| CDS-3UTR TCA 90 bp | AACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTGAGACAGGAGGCAGCAAACTGAGCCGCTGGCAATaGCCTGGTCATTATGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NIQEPSRAGWALETGGSKLSRWQ*PGHYVD Trigger: GTCCACATAATGACCAGGTCATTGCCAGCGGCTCAG...TTTGCTGCCTCCTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR GCA 90 bp | ACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGTTTCTTGTCTTTGGATaGGGTGCAGATGAGACTACC | + |
|
Preference number: 4 (lower is better) Translates to: TYRDSGAPKLRSQRPPSRFLVFG*GADETT Trigger: GGTAGTCTCATCTGCACCGCATCCAAAGACAAGAAA...CCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCTGGCAAGTAGCAGCCTGATCTGGGTGGTGGGGCAGAGGGCCTGTGCGTCCTGCATGTTTTTCTaGACTGAGAAGCACATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVLASSSLIWVVGQRACASCMFF*TEKHIA Trigger: CGCAATGTGCTTCTCAGTGCAGAAAAACATGCAGGA...CGCACAGGCCCTCTGCCCCACCACCCAGATCAGGCTGCTACTTGCCAGCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | GTGGGCTTCTTGGGGGCACAGCTGAGCTCGCTCTTCTaGTTTGCAGCCGGCTTGCTGTCCAGGATGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGFLGAQLSSLF*FAAGLLSRMFF Trigger: GAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAGCTGTGCCCCCAAGAAGCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | GCCGGCTTGCTGTCCAGGATGTTCTTCTTGACCACCTaGAGGTCCCTGTTCTTGCCTGGAATGTACCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLSRMFFLTT*RSLFLPGMYPC Trigger: GCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAACATCCTGGACAGCAAGCCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTCCAGGTTTGCGGAAATTTGGGAGAGGAACCGAGTTCTTACTGGAATGTTGCGGGCCGTCGGGTaGCAGGCCACGATGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SASRFAEIWERNRVLTGMLRAVG*QATMPT Trigger: AGTTGGCATCGTGGCCTGGCACCCGACGGCCCGCAA...CATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTTGTCCAAACTGCCCGGAAGGGAACCACACTGCTGGAAGGGACAGGCACGAGGTAGTGGACATATaGGGATTCATCCGTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPCPNCPEGNHTAGRDRHEVVDI*GFIRDL Trigger: GAGATCACGGATGAATCCCCATATGTCCACTACCTC...GTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTGTCCAAACTGCCCGGAAGGGAACCACACTGCTGGAAGGGACAGGCACATGGGGATTCATCCGTaGTCTCAAAATAGCGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: CPCPNCPEGNHTAGRDRHMGIHP*SQNSGY Trigger: GTATCCGCTATTTTGAGATCACGGATGAATCCCCAT...GTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR TCA 90 bp | TCCCTTTCCACTCTGTTCTGGACCTTTCCCTCCGCTGCAACATTCAAGAGCCCTCCACGAATCTGGGGTTaGCGGCACAAAAGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSTLFWTFPSAATFKSPPRIWG*RHKRNC Trigger: ACAGTTCCTTTTGTGCCGTCAACCCCAGATTCGTGG...AGGGCTCTTGAATGTTGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR TCA 90 bp | CTATGGCCACTCTATAAGAGTGGGTGTAGGAGCAGTTCACTGTCTTCCTCCGGTCTGAGCCGCTGGCAATaGCCTGGTCATTATGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LWPLYKSGCRSSSLSSSGLSRWQ*PGHYVD Trigger: GTCCACATAATGACCAGGTCATTGCCAGCGGCTCAG...ACCGGAGGAAGACAGTGAACTGCTCCTACACCCACTCTTATAGAGTGGCCATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCGTAGCACACGTACAGACAATGCAGTGTGAGTCATTCCAGCCATGGTCTCGGTCAGGGAAAGGGTaGGTCCATTTTCCGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVAHVQTMQCESFQPWSRSGKG*VHFPGS Trigger: AGATCCCGGAAAATGGACTCACCCTTTCCCTGACCG...AGACCATGGCTGGAATGACTCACACTGCATTGTCTGTACGTGTGCTACGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCGGCCCCCATCTCGGTGGCTGAGAGAACCTTTTCTTACAACACTACCCCCTGGAATGTACCCGTaGTTCAACGATATGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQRPPSRWLREPFLTTLPPGMYP*FNDMRM Trigger: CATCCTCATATCGTTGAAGCACGGGTACATTCCAGG...GGGTAGTGTTGTAAGAAAAGGTTCTCTCAGCCACCGAGATGGGGGCCGCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR GCA 90 bp | TCCCTTTCCACTCTGTTCTGGACCTTTCCCTCCGCTGCAACATTCAAGAGCCCTATCTTCGCCAGCTGCTaGTCCAACTTGGAAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSTLFWTFPSAATFKSPIFASC*SNLEMR Trigger: GCGCATTTCCAAGTTGGAGCAGCAGCTGGCGAAGAT...AGGGCTCTTGAATGTTGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR TCA 90 bp | CCCCAGAACCTTTGTGAATCTTCACACAGTCCTCAGCGTAGCACACGTACAGACCCACGAATCTGGGGTTaGCGGCACAAAAGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQNLCESSHSPQRSTRTDPRIWG*RHKRNC Trigger: ACAGTTCCTTTTGTGCCGTCAACCCCAGATTCGTGG...GTCTGTACGTGTGCTACGCTGAGGACTGTGTGAAGATTCACAAAGGTTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR CCA 90 bp | CACTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCGACCTGGTCATTATGTaGACACCAGTCTATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HYPVSPHTLSGCCHTMLCDLVIM*TPVYVQ Trigger: CTGGACATAGACTGGTGTCCACATAATGACCAGGTC...GCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR CCA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACGTCCCTGTTCTTGCCTaGAATGTACCCGTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYVPVLA*NVPVLQ Trigger: TTGAAGCACGGGTACATTCCAGGCAAGAACAGGGAC...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR TCA 90 bp | CACTACCCAGTCAGTCCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCGAAATGCGCTCGTCTTaGCTGCAGATTGTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HYPVSPHTLSGCCHTMLCEMRSS*LQIVSF Trigger: AAAGGAAACAATCTGCAGTCAAGACGAGCGCATTTC...GCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGGACTGACTGGGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCAGGTTTGCGGAAATTTGGGAGAGGAACCGAGTTCTTACTGGAATGGTCTATGTCCAGCACTaGTCCTGTGTGGCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: SASRFAEIWERNRVLTGMVYVQH*SCVATH Trigger: GTGTGTGGCCACACAGGACCAGTGCTGGACATAGAC...CATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR CCA 90 bp | CGATCTCTGAACTTCCCTTTCCACTCTGTTCTGGACCTTTCCCTCCGCTGCAACGACCTGGTCATTATGTaGACACCAGTCTATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSLNFPFHSVLDLSLRCNDLVIM*TPVYVQ Trigger: CTGGACATAGACTGGTGTCCACATAATGACCAGGTC...GTTGCAGCGGAGGGAAAGGTCCAGAACAGAGTGGAAAGGGAAGTTCAGAGATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | CCTGACGAAAAGCTCAGCTTCCAGGTTTGCGGAAATTaGGGAGAGGAACCGAGTTCTTACTGGAATGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PDEKLSFQVCGN*GEEPSSYWNVA Trigger: GGCCACATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAGCTTTTCGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | GGAGAGAGAGAGCAAGGAGAGAGAGAGACAGGACTTTaGATCGAAGACTCAATGGAATGGGGGCAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEREQGERETGL*IEDSMEWGQCV Trigger: CACACACTGCCCCCATTCCATTGAGTCTTCGATCAAAAGTCCTGTCTCTCTCTCTCCTTGCTCTCTCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR TCA 90 bp | ACCGAGTTCTTACTGGAATGTGGCCTATCGCTGGCTGACAGATCTGACATGGAATCCCACATAAGTAGATaGTGCTGGTGTCCGGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TEFLLECGLSLADRSDMESHISR*CWCPDR Trigger: ACGATCCGGACACCAGCATCATCTACTTATGTGGGA...TTCCATGTCAGATCTGTCAGCCAGCGATAGGCCACATTCCAGTAAGAACTCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCAGCTTCCAGGTTTGCGGAAATTTGGGAGAGGAACCGAGTTCTTACTGGCCATCTTCGCCAGCTaGTGCTCCAACTTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KAQLPGLRKFGRGTEFLLAIFAS*CSNLEM Trigger: CATTTCCAAGTTGGAGCAGCAGCTGGCGAAGATGGC...CAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| 3UTR CAA 72 bp | AGGATGTTCTTCTTGACCACCTTGAGGTCCCTGTTCTaGCCTGGAATGTACCCGTGCTTCAACGATATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RMFFLTTLRSLF*PGMYPCFNDMR Trigger: CCTCATATCGTTGAAGCACGGGTACATTCCAGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAACATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| CDS-3UTR CCA 90 bp | GTAATTAATTCAACGGACCCCAGAACCTTTGTGAATCTTCACACAGTCCTCAGCGTCTATGTCCAGCACTaGTCCTGTGTGGCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: VINSTDPRTFVNLHTVLSVYVQH*SCVATH Trigger: GTGTGTGGCCACACAGGACCAGTGCTGGACATAGAC...GCTGAGGACTGTGTGAAGATTCACAAAGGTTCTGGGGTCCGTTGAATTAATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | CGCCAGCTGCTGCTCCAACTTGGAAATGCGCTCGTCTaGACTGCAGATTGTTTCCTTTATGGATTTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLLLQLGNALV*TADCFLYGFDL Trigger: GAGATCAAATCCATAAAGGAAACAATCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGCAGCAGCTGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATCCAACATTAAACCACAAGACAGACACAGAAACCTACAGAGACTCAGGAATTCGTCCCGTCTTGTaGAGAGGGAGCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYPTLNHKTDTETYRDSGIRPVL*RGSTRK Trigger: CTTCCTGGTGCTCCCTCTGCACAAGACGGGACGAAT...TCCTGAGTCTCTGTAGGTTTCTGTGTCTGTCTTGTGGTTTAATGTTGGATAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCACACGTACAGACAATGCAGTGTGAGTCATTCCAGCCATGGTCTCTCCATGAATCTCATCCAACTTaGCTTCGTTTTGCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAHVQTMQCESFQPWSLHESHPT*LRFAHW Trigger: CCAGTGTGCAAAACGAAGCCAAGTTGGATGAGATTC...ATGGAGAGACCATGGCTGGAATGACTCACACTGCATTGTCTGTACGTGTGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR GCA 90 bp | ATTAATTCAACGGACCCCAGAACCTTTGTGAATCTTCACACAGTCCTCAGCGTAGCTCCAACTTGGAAATaGGCTCGTCTTGACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: INSTDPRTFVNLHTVLSVAPTWK*ARLDCR Trigger: TCTGCAGTCAAGACGAGCGCATTTCCAAGTTGGAGC...TACGCTGAGGACTGTGTGAAGATTCACAAAGGTTCTGGGGTCCGTTGAATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTCCAGGTTTGCGGAAATTTGGGAGAGGAACCGAGTTCTTACTGGAATGAGAGCAATTGGTTCCTaGATGTTTTTCTGCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SASRFAEIWERNRVLTGMRAIGS*MFFCTE Trigger: CTCAGTGCAGAAAAACATGCAGGAACCAATTGCTCT...CATTCCAGTAAGAACTCGGTTCCTCTCCCAAATTTCCGCAAACCTGGAAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
||
| 3UTR CAA 72 bp | TTTATGGATTTGATCTCTTTCAGAATCTCATCCAACTaGGCTTCGTTTTGCACACTGGCCGTGTCTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FMDLISFRISSN*ASFCTLAVSVG Trigger: GCCCACAGACACGGCCAGTGTGCAAAACGAAGCCAAGTTGGATGAGATTCTGAAAGAGATCAAATCCATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| 3UTR CAA 72 bp | CAATGCCTTTTATCTCTGAAAACGGAAGCGAGTGTTTaGACAGAACACTATGGCCACTCTATAAGAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: QCLLSLKTEASV*TEHYGHSIRVG Trigger: ACCCACTCTTATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGAGATAAAAGGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| CDS-3UTR GCA 90 bp | TTTATCTCTGAAAACGGAAGCGAGTGTTTTGACAGAACACTATGGCCACTCTATTGCGCTCGTCTTGACTaGAGATTGTTTCCTTTATGG | + |
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Preference number: 4 (lower is better) Translates to: FISENGSECFDRTLWPLYCARLD*RLFPLW Trigger: CCATAAAGGAAACAATCTGCAGTCAAGACGAGCGCA...ATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGTTTTCAGAGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | CCAGTGCTGGCAAGTAGCAGCCTGATCTGGGTGGTGGGGCAGAGGGCCTGTGCGTCAATTCGTCCCGTCTaGTGCAGAGGGAGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: PVLASSSLIWVVGQRACASIRPV*CRGSTR Trigger: CCTGGTGCTCCCTCTGCACAAGACGGGACGAATTGA...CGCACAGGCCCTCTGCCCCACCACCCAGATCAGGCTGCTACTTGCCAGCACTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| CDS-3UTR CAA 90 bp | AGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCGTGTCTGTGGGCTTCTaGGGGGCACAGCTGAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: RNLQRLRSPEASEPAAPIVSVGF*GAQLSS Trigger: CGAGCTCAGCTGTGCCCCCAAGAAGCCCACAGACAC...GATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | GCAGGCATGCCCAGGGCACGTCCAGTGCTGGCAAGTAGCAGCCTGATCTGGGTGGGGAGCAGCACCCCATaGCTAGTGTCCATTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: AGMPRARPVLASSSLIWVGSSTP*LVSISW Trigger: CCATGAAATGGACACTAGCAATGGGGTGCTGCTCCC...CACCCAGATCAGGCTGCTACTTGCCAGCACTGGACGTGCCCTGGGCATGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | CACACAGTGCCTGGGTTCAAGCCCCACACTATACCCAAGGGCCAGGCAAGCTGCTCAATTCGTCCCGTCTaGTGCAGAGGGAGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: HTVPGFKPHTIPKGQASCSIRPV*CRGSTR Trigger: CCTGGTGCTCCCTCTGCACAAGACGGGACGAATTGA...GCAGCTTGCCTGGCCCTTGGGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| CDS-3UTR CAA 90 bp | TGCCCTTGTCCAAACTGCCCGGAAGGGAACCACACTGCTGGAAGGGACAGGCACTTGAGGTCCCTGTTCTaGCCTGGAATGTACCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: CPCPNCPEGNHTAGRDRHLRSLF*PGMYPC Trigger: GCACGGGTACATTCCAGGCAAGAACAGGGACCTCAA...GTGCCTGTCCCTTCCAGCAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | ACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAGCGGCCCCCATCTCGGAGAATCTCATCCAACTaGGCTTCGTTTTGCACACTG | + |
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Preference number: 5 (lower is better) Translates to: TYRDSGAPKLRSQRPPSRRISSN*ASFCTL Trigger: CAGTGTGCAAAACGAAGCCAAGTTGGATGAGATTCT...CCGAGATGGGGGCCGCTGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | CACACAGTGCCTGGGTTCAAGCCCCACACTATACCCAAGGGCCAGGCAAGCTGCGTTCCTGCATGTTTTTaGGGTTCCAGAGCGCCAACT | + |
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Preference number: 5 (lower is better) Translates to: HTVPGFKPHTIPKGQASCVPACF*GSRAPT Trigger: AGTTGGCGCTCTGGAACCCAAAAAACATGCAGGAAC...GCAGCTTGCCTGGCCCTTGGGTATAGTGTGGGGCTTGAACCCAGGCACTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | AACATTCAAGAGCCCTCGAGGGCTGGCTGGGCGCTTGAGACAGGAGGCAGCAAATTGTTTGCAGCCGGCTaGCTGTCCAGGATGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: NIQEPSRAGWALETGGSKLFAAG*LSRMFF Trigger: GAAGAACATCCTGGACAGCAAGCCGGCTGCAAACAA...TTTGCTGCCTCCTGTCTCAAGCGCCCAGCCAGCCCTCGAGGGCTCTTGAATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | CCACACACTCTAAGCGGCTGCTGCCATACTATGCTCTGCCCTGATAACCTGTACCTGAGCTCGCTCTTCTaGTTTGCAGCCGGCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PHTLSGCCHTMLCPDNLYLSSLF*FAAGLL Trigger: CAGCAAGCCGGCTGCAAACAAGAAGAGCGAGCTCAG...GTACAGGTTATCAGGGCAGAGCATAGTATGGCAGCAGCCGCTTAGAGTGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | TATCCGCTCGCCTTGGGTGCCCTTGTCCAAACTGCCCGGAAGGGAACCACACTGCGATGCCAACTCTTTTaGAGTGCCCTTCTAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: YPLALGALVQTARKGTTLRCQLF*SALLES Trigger: TGATTCTAGAAGGGCACTCAAAAAGAGTTGGCATCG...CAGTGTGGTTCCCTTCCGGGCAGTTTGGACAAGGGCACCCAAGGCGAGCGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| CDS-3UTR CAA 90 bp | GTAGCACACGTACAGACAATGCAGTGTGAGTCATTCCAGCCATGGTCTCTCCATCCAGTAGTGAAGACGTaGCCGTCCGCCAGGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: VAHVQTMQCESFQPWSLHPVVKT*PSARKM Trigger: CATCTTCCTGGCGGACGGCAACGTCTTCACTACTGG...ATGGAGAGACCATGGCTGGAATGACTCACACTGCATTGTCTGTACGTGTGCTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | CAAGACAGACACAGAAACCTACAGAGACTCAGGAGCCCCGAAGCTTCGGAGCCAATGACTCTCACTTTCTaGTCTTTGGATGCGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: QDRHRNLQRLRSPEASEPMTLTF*SLDAVQ Trigger: CTGCACCGCATCCAAAGACAAGAAAGTGAGAGTCAT...TGGCTCCGAAGCTTCGGGGCTCCTGAGTCTCTGTAGGTTTCTGTGTCTGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTGTAGGAGCAGTTCACTGTCTTCCTCCGGTGCCACAGGGAAACAGACGATGCCAACTCTTTTaGAGTGCCCTTCTAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: RVGVGAVHCLPPVPQGNRRCQLF*SALLES Trigger: TGATTCTAGAAGGGCACTCAAAAAGAGTTGGCATCG...TCTGTTTCCCTGTGGCACCGGAGGAAGACAGTGAACTGCTCCTACACCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004646.13 ENSMUST00000164980.8 |
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| CDS TCA 90 bp | GATGAGACTACCGTTACGGCTCCAGCTCACATTGTAAATCATGTCTaGATGCATATCGTCCAAGTTGATGAGGGCTTCCCCTGTCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: DETTVTAPAHIVNHV*MHIVQVDEGFPCPH Trigger: GTGGGGACAGGGGAAGCCCTCATCAACTTGGACGATATGCATTCAGACATGATTTACAATGTGAGCTGGAGCCGTAACGGTAGTCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS-3UTR CAA 90 bp | ATTAATTCAACGGACCCCAGAACCTTTGTGAATCTTCACACAGTCCTCAGCGTATTCTTCTTGACCACCTaGAGGTCCCTGTTCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: INSTDPRTFVNLHTVLSVFFLTT*RSLFLP Trigger: AGGCAAGAACAGGGACCTCAAGGTGGTCAAGAAGAA...TACGCTGAGGACTGTGTGAAGATTCACAAAGGTTCTGGGGTCCGTTGAATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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| CDS GCA 72 bp | TTTTCTGCACTGAGAAGCACATTGCGGGCCGTCGGGTaGCAGGCCACGATGCCAACTCTTTTTGAGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: FSALRSTLRAVG*QATMPTLFECP Trigger: AGGGCACTCAAAAAGAGTTGGCATCGTGGCCTGGCACCCGACGGCCCGCAATGTGCTTCTCAGTGCAGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164980.8 |
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| CDS TCA 72 bp | ACCGTTACGGCTCCAGCTCACATTGTAAATCATGTCTaGATGCATATCGTCCAAGTTGATGAGGGCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: TVTAPAHIVNHV*MHIVQVDEGFP Trigger: GGGGAAGCCCTCATCAACTTGGACGATATGCATTCAGACATGATTTACAATGTGAGCTGGAGCCGTAACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004646.13 |
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