Pregenerated sensors for CORO1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024835Ensembl transcript IDs: ENSMUST00000008893.9, ENSMUST00000123874.8, ENSMUST00000236397.2, ENSMUST00000237125.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTaGCCTGCCACAGAGGCACTGAGCAGCCAACTGCCTGGTGTGACC | + |
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Preference number: 1 (lower is better) Translates to: ASNLGPRLWRGANWL*PATEALSSQLPGVT Trigger: GGTCACACCAGGCAGTTGGCTGCTCAGTGCCTCTGTGGCAGGTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CCA 90 bp | AGGTGGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGTCCCTGGTaGTCCTATGTATCCCCATTCTCCATGCGGCCCAGCTGCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: RWEGLEEAVSGAGPW*SYVSPFSMRPSCSS Trigger: GGAGGAGCAGCTGGGCCGCATGGAGAATGGGGATACATAGGACCACCAGGGACCTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 90 bp | GGTCCCTGGTGGTCCTATGTATCCCCATTCTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCTGATACGTTCTCCCTGCTCCTTGACCAGC | + |
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Preference number: 1 (lower is better) Translates to: GPWWSYVSPFSMRPS*SSRRLIRSPCSLTS Trigger: GCTGGTCAAGGAGCAGGGAGAACGTATCAGCCGCCTGGAGGAGCAGCTGGGCCGCATGGAGAATGGGGATACATAGGACCACCAGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 90 bp | AGCTTCACCAGCCCCAGCAAGGTTGCCACTGGGGACATCAGTAACTaGAGTAGCTGTGGAGGCTCCGGAGCGGCTGTAACTGGCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SFTSPSKVATGDISN*SSCGGSGAAVTGRP Trigger: AGGCCTGCCAGTTACAGCCGCTCCGGAGCCTCCACAGCTACTGCAGTTACTGATGTCCCCAGTGGCAACCTTGCTGGGGCTGGTGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 90 bp | AAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTaGAAACTGGCTGTGACCTGCCACAGAGGCACTGAGCAGCCAACT | + |
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Preference number: 1 (lower is better) Translates to: KVRWCFQPGPQAVER*KLAVTCHRGTEQPT Trigger: AGTTGGCTGCTCAGTGCCTCTGTGGCAGGTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CCA 90 bp | AAACTGGCTGTGACCTGCCACAGAGGCACTGAGCAGCCAACTGCCTaGTGTGACCTGGCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KLAVTCHRGTEQPTA*CDLATEARWEGLEE Trigger: CTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGTCACACCAGGCAGTTGGCTGCTCAGTGCCTCTGTGGCAGGTCACAGCCAGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CCA 90 bp | CAACTGCCTGGTGTGACCTGGCCACAGAAGCTAGGTGGGAAGGGTTaGAGGAGGCAGTGTCGGGAGCAGGTCCCTGGTGGTCCTATGTAT | + |
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Preference number: 1 (lower is better) Translates to: QLPGVTWPQKLGGKG*RRQCREQVPGGPMY Trigger: ATACATAGGACCACCAGGGACCTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGTCACACCAGGCAGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR TCA 90 bp | GGCTGTAACTGGCAGGCCTGCTGTCTGATAGCACGTTGCGCCGGCTaGCCTTCAGGTCCCGTTGTTTACTGGGCACATAGGCTTCCCGTA | + |
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Preference number: 1 (lower is better) Translates to: GCNWQACCLIARCAG*PSGPVVYWAHRLPV Trigger: TACGGGAAGCCTATGTGCCCAGTAAACAACGGGACCTGAAGGTCAGCCGGCGCAACGTGCTATCAGACAGCAGGCCTGCCAGTTACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 90 bp | GGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTaGCTTGGTACAAAAATCTTCCAAAAGTCAGGTGGTGCTTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: GWAGRGDGPLKYLGI*LGTKIFQKSGGASN Trigger: GTTGGAAGCACCACCTGACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CAA 90 bp | CGGCCCAGCTGCTCCTCCAGGCGGCTGATACGTTCTCCCTGCTCCTaGACCAGCATCCGGAGTGCCCGGAGCTCCTGCATCACCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RPSCSSRRLIRSPCS*TSIRSARSSCITSS Trigger: GGAAGAGGTGATGCAGGAGCTCCGGGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAACGTATCAGCCGCCTGGAGGAGCAGCTGGGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGCGTCAGCTAGAAAGATaGCCCGCATGGGCCGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SGGASNLGPRLWRGANWLRQLER*PAWAGP Trigger: GGGCCCGGCCCATGCGGGCCATCTTTCTAGCTGACG...CAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCCCTGGTGGTCCTATGTATCCCCATTCTCCATGCGGCCCAGCTGCTCCGTTCTCCCTGCTCCTTaGCCAGCATCCGGAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: AGPWWSYVSPFSMRPSCSVLPAP*PASGVP Trigger: GGGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAAC...GGAGCAGCTGGGCCGCATGGAGAATGGGGATACATAGGACCACCAGGGACCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCTGATA | + |
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Preference number: 2 (lower is better) Translates to: QVVLPTWAPGCGEVQTGCSMRPS*SSRRLI Trigger: TATCAGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA...ACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTCTAGGTGGGAAGGGTTaGAGGAGGCAGTGTCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QVVLPTWAPGCGEVQTGCLGGKG*RRQCRE Trigger: CTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAG...ACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATGAAAGATGGCCCGCATaGGCCGGGCCCCCTCGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GGSGLGRSRRWSLKVLGNERWPA*AGPPRE Trigger: CTCACGAGGGGGCCCGGCCCATGCGGGCCATCTTTC...ATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAGTGGTGCTTCCAACCTaGGCCCCAGGCTGTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SKSQVVLPTWAPGCGEVQVVLPT*APGCGE Trigger: CTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCAC...TTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAGAGCAGCCAACTGCCTaGTGTGACCTGGCCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: PISAAFSGEGAVGWAGRGEQPTA*CDLATE Trigger: TTCTGTGGCCAGGTCACACCAGGCAGTTGGCTGCTC...TCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | ATACGTTCTCCCTGCTCCTTGACCAGCATCCGGAGTGCCCGGAGCTCCTGCATCGAGCAGCCAACTGCCTaGTGTGACCTGGCCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: IRSPCSLTSIRSARSSCIEQPTA*CDLATE Trigger: TTCTGTGGCCAGGTCACACCAGGCAGTTGGCTGCTC...GATGCAGGAGCTCCGGGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAACGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATCTAGGTGGGAAGGGTTaGAGGAGGCAGTGTCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GGSGLGRSRRWSLKVLGNLGGKG*RRQCRE Trigger: CTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAG...ATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CAA 90 bp | TCTGCCACCAGGGTGCCCCGCCTAGGATCGATGATTCGGACGCTCTaGTCCTTGCAAGCTGAGCAAAAGAGGCTGCCATTGTGGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SATRVPRLGSMIRTL*SLQAEQKRLPLWFQ Trigger: CTGGAACCACAATGGCAGCCTCTTTTGCTCAGCTTGCAAGGACAAGAGCGTCCGAATCATCGATCCTAGGCGGGGCACCCTGGTGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCCCTGGTGGTCCTATGTATCCCCATTCTCCATGCGGCCCAGCTGCTCCATTGGATTAGCATCCTaGCCGCTCACCCAATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGPWWSYVSPFSMRPSCSIGLAS*PLTQSS Trigger: AGAGGATTGGGTGAGCGGTCAGGATGCTAATCCAAT...GGAGCAGCTGGGCCGCATGGAGAATGGGGATACATAGGACCACCAGGGACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGTCTGATAGCACGTTGCGCCGGCTGACCTTCAGGTCCCGTTGTTTACTGCTTGAATCCAGCTCCTaGAGGGCCATGGGCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LLSDSTLRRLTFRSRCLLLESSS*RAMGSS Trigger: TGAGGAGCCCATGGCCCTGCAGGAGCTGGATTCAAG...CAGTAAACAACGGGACCTGAAGGTCAGCCGGCGCAACGTGCTATCAGACAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAGCTCACCCAATCCTCTaGTTCAAGAGCAGCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SKSQVVLPTWAPGCGEVQAHPIL*FKSSLR Trigger: CCTGAGGCTGCTCTTGAAGCAGAGGATTGGGTGAGC...TTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGAAGTACTTGGGAATTTaGCTTGGTACAAAAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: SGGASNLGPRLWRGANWLKYLGI*LGTKIF Trigger: GAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTT...CAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGCTTGGGAATTTGCCTTaGTACAAAAATCTTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: KVRWCFQPGPQAVERCKLLGNLP*YKNLPK Trigger: TTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAG...CAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCCTTAAAGTACTTGGGAATTTGCCTTGGTACAAAAATCTTCCAAAAGTCAGCCTTTTCACGTTCTaGCACCAGGGTGCCCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: WSLKVLGNLPWYKNLPKVSLFTF*HQGAPP Trigger: AGGCGGGGCACCCTGGTGGCAGAACGTGAAAAGGCT...GACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 72 bp | CCCAGCTGCTCCTCCAGGCGGCTGATACGTTCTCCCTaGTCCTTGACCAGCATCCGGAGTGCCCGGAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PSCSSRRLIRSP*SLTSIRSARSS Trigger: GGAGCTCCGGGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAACGTATCAGCCGCCTGGAGGAGCAGCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR CCA 72 bp | GGGTTGGAGGAGGCAGTGTCGGGAGCAGGTCCCTGGTaGTCCTATGTATCCCCATTCTCCATGCGGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: GLEEAVSGAGPW*SYVSPFSMRPS Trigger: GCTGGGCCGCATGGAGAATGGGGATACATAGGACCACCAGGGACCTGCTCCCGACACTGCCTCCTCCAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTCGTTCTCCCTGCTCCTaGACCAGCATCCGGAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: QVVLPTWAPGCGEVQTGCRSPCS*TSIRSA Trigger: GGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAACG...ACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 72 bp | CCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTGACCTaGCACAGAGGCACTGAGCAGCCAACTGCCTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: PQAVERCKLAVT*HRGTEQPTAWC Trigger: ACACCAGGCAGTTGGCTGCTCAGTGCCTCTGTGGCAGGTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR GCA 72 bp | TGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTaGAAACTGGCTGTGACCTGCCACAGAGGCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: WCFQPGPQAVER*KLAVTCHRGTE Trigger: CTCAGTGCCTCTGTGGCAGGTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CCA 72 bp | CCAACTGCCTGGTGTGACCTGGCCACAGAAGCTAGGTaGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: PTAWCDLATEAR*EGLEEAVSGAG Trigger: ACCTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGTCACACCAGGCAGTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CCA 72 bp | GTGACCTGCCACAGAGGCACTGAGCAGCCAACTGCCTaGTGTGACCTGGCCACAGAAGCTAGGTGGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: VTCHRGTEQPTA*CDLATEARWEG Trigger: CCCTTCCCACCTAGCTTCTGTGGCCAGGTCACACCAGGCAGTTGGCTGCTCAGTGCCTCTGTGGCAGGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CCA 72 bp | GAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGTCCCTaGTGGTCCTATGTATCCCCATTCTCCATGCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: EGLEEAVSGAGP*WSYVSPFSMRP Trigger: GGGCCGCATGGAGAATGGGGATACATAGGACCACCAGGGACCTGCTCCCGACACTGCCTCCTCCAACCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 72 bp | GATACGTTCTCCCTGCTCCTTGACCAGCATCCGGAGTaGCCGGAGCTCCTGCATCACCTCTTCCAGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: DTFSLLLDQHPE*PELLHHLFQLP Trigger: GGGAAGCTGGAAGAGGTGATGCAGGAGCTCCGGGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAACGTATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR GCA 72 bp | TGGTCCTATGTATCCCCATTCTCCATGCGGCCCAGCTaGTCCTCCAGGCGGCTGATACGTTCTCCCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: WSYVSPFSMRPS*SSRRLIRSPCS Trigger: GGAGCAGGGAGAACGTATCAGCCGCCTGGAGGAGCAGCTGGGCCGCATGGAGAATGGGGATACATAGGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR CCA 72 bp | ACAGAGGCACTGAGCAGCCAACTGCCTGGTGTGACCTaGCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TEALSSQLPGVT*PQKLGGKGWRR Trigger: CCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGTCACACCAGGCAGTTGGCTGCTCAGTGCCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR TCA 72 bp | TGGCAGGCCTGCTGTCTGATAGCACGTTGCGCCGGCTaGCCTTCAGGTCCCGTTGTTTACTGGGCACATAGG | + |
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Preference number: 3 (lower is better) Translates to: WQACCLIARCAG*PSGPVVYWAHR Trigger: CCTATGTGCCCAGTAAACAACGGGACCTGAAGGTCAGCCGGCGCAACGTGCTATCAGACAGCAGGCCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCCAAAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTCGGACGCTCTTGTCCTaGCAAGCTGAGCAAAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: IFQKSGGASNLGPRLWRGRTLLS*QAEQKR Trigger: CCTCTTTTGCTCAGCTTGCAAGGACAAGAGCGTCCG...ACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTTTGGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| 3UTR CCA 72 bp | ATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTaGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTG | + |
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Preference number: 3 (lower is better) Translates to: ISAAFSGEGAVG*AGRGDGPLKYL Trigger: CAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR GCA 72 bp | GGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTaGCTTGGTACAAAAATCTTCCAAAAGTCAGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: GRGDGPLKYLGI*LGTKIFQKSGG Trigger: ACCACCTGACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACCATCTCCTCGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CCA 72 bp | AGGAGATGGTCCCTTAAAGTACTTGGGAATTTGCCTTaGTACAAAAATCTTCCAAAAGTCAGGTGGTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: RRWSLKVLGNLP*YKNLPKVRWCF Trigger: GAAGCACCACCTGACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACCATCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGAAAGATGGCCCGCATaGGCCGGGCCCCCTCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TWPQKLGGKGWRRQCREQERWPA*AGPPRE Trigger: CTCACGAGGGGGCCCGGCCCATGCGGGCCATCTTTC...CTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
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| 3UTR CAA 72 bp | TGCTCCTCCAGGCGGCTGATACGTTCTCCCTGCTCCTaGACCAGCATCCGGAGTGCCCGGAGCTCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: CSSRRLIRSPCS*TSIRSARSSCI Trigger: GATGCAGGAGCTCCGGGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAACGTATCAGCCGCCTGGAGGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| CDS-3UTR TCA 90 bp | TCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGGTTCTCCCTGCTCCTTaGCCAGCATCCGGAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SGGASNLGPRLWRGANWLVLPAP*PASGVP Trigger: GGGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAAC...CAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
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| CDS-3UTR TCA 90 bp | CCATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAGGCACGTTGCGCCGGCTaGCCTTCAGGTCCCGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PSLLLFLVRGQWVGQVEEARCAG*PSGPVV Trigger: AACAACGGGACCTGAAGGTCAGCCGGCGCAACGTGC...CTCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
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| CDS-3UTR TCA 90 bp | GCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAGCTCCTCCAGGCGGCTaGTACGTTCTCCCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AFSGEGAVGWAGRGDGPLAPPGG*YVLPAP Trigger: AGGAGCAGGGAGAACGTATCAGCCGCCTGGAGGAGC...TAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | CCCATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAAGCCTTTTCACGTTCTaGCACCAGGGTGCCCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISAAFSGEGAVGWAGRGSLFTF*HQGAPP Trigger: AGGCGGGGCACCCTGGTGGCAGAACGTGAAAAGGCT...TCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTGACCTGCTTGAATCCAGCTCCTaGAGGGCCATGGGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLPTWAPGCGEVQTGCDLLESSS*RAMGSS Trigger: TGAGGAGCCCATGGCCCTGCAGGAGCTGGATTCAAG...CAGGTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGTCCCGCTCACCCAATCCTCTaGTTCAAGAGCAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATEARWEGLEEAVSGAGPAHPIL*FKSSLR Trigger: CCTGAGGCTGCTCTTGAAGCAGAGGATTGGGTGAGC...GGGACCTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTGACCTGAGTGCCCGGAGCTCCTaGATCACCTCTTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPTWAPGCGEVQTGCDLSARSS*ITSSSF Trigger: GAAGCTGGAAGAGGTGATGCAGGAGCTCCGGGCACT...CAGGTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGAGGCGCCTCCACCACTaGCTTCCACAATCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGASNLGPRLWRGANWLRRLHH*LPQSLP Trigger: TGGCAGTGATTGTGGAAGCCAGTGGTGGAGGCGCCT...CAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGCTCCTCAAGGTTTTCTaGGTCCCAGAGCGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGGASNLGPRLWRGANWLLLKVF*VPERQL Trigger: CAGCTGGCGCTCTGGGACCCAGAAAACCTTGAGGAG...CAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CCA 90 bp | GACCTGGCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCACGGAGCGGCTGTAACTaGCAGGCCTGCTGTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: DLATEARWEGLEEAVSGARSGCN*QACCLI Trigger: TATCAGACAGCAGGCCTGCCAGTTACAGCCGCTCCG...TGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGTCCCTCTCAAAGTACCGGATaGTGGAATCGCCCTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATEARWEGLEEAVSGAGPSQSTG*WNRPCH Trigger: GTGGCAAGGGCGATTCCAGCATCCGGTACTTTGAGA...GGGACCTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGGGCTTCCACAATCACTaGCAGGAACTTGGGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGGASNLGPRLWRGANWLGFHNH*QELGVD Trigger: GTCAACCCCAAGTTCCTGGCAGTGATTGTGGAAGCC...CAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTGACCTGTCATTCTTGACCGGCTaGCCGAATACATGCCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPTWAPGCGEVQTGCDLSFLTG*PNTCRN Trigger: ATTCCGGCATGTATTCGGTCAGCCGGTCAAGAATGA...CAGGTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR TCA 90 bp | CGGCTGAAACCTGTGGTGAACACCTTCCCGTCAGCTAGAAAGATGGCCCGCATGCCAGGAACTTGGGGTTaGCTGCGCAGAAGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLKPVVNTFPSARKMARMPGTWG*LRRRCC Trigger: ACAGCACCTTCTGCGCAGTCAACCCCAAGTTCCTGG...CATGCGGGCCATCTTTCTAGCTGACGGGAAGGTGTTCACCACAGGTTTCAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGGAATCTGCCATACCATaGCAGTGCAGTCCTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SGGASNLGPRLWRGANWLESAIP*QCSPLI Trigger: GATCAGAGGACTGCACTGTCATGGTATGGCAGATTC...CAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGTGACCTGGCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGCAAAGTACCGGATGCTaGAATCGCCCTTGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WCDLATEARWEGLEEAVSQSTGC*NRPCHR Trigger: TCTGTGGCAAGGGCGATTCCAGCATCCGGTACTTTG...CGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGTCACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTTCTTGGCACAGTCATaGCTATGGGCTCACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFLVRGQWVGQVEEMVPFLAQS*LWAHTC Trigger: GCAAGTGTGAGCCCATAGTCATGACTGTGCCAAGAA...AGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAGGTAGGCCTTGTCAATaGGGCCCGTCTTGTTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFSGEGAVGWAGRGDGPLGRPCQ*GPSCLE Trigger: CTCTAAACAAGACGGGCCGCATTGACAAGGCCTACC...TAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR GCA 90 bp | AAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGACGGTACAGCTCCTCTaGAGTGCCCACATTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVRWCFQPGPQAVERCKLTVQLL*SAHIPD Trigger: ATCTGGAATGTGGGCACTGCAGAGGAGCTGTACCGT...CAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR GCA 90 bp | CCCATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGACTGAGCAAAAGAGGCTaGCATTGTGGTTCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PISAAFSGEGAVGWAGRGLSKRG*HCGSSS Trigger: TGAGCTGGAACCACAATGGCAGCCTCTTTTGCTCAG...TCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| 3UTR CAA 72 bp | AGGGTGCCCCGCCTAGGATCGATGATTCGGACGCTCTaGTCCTTGCAAGCTGAGCAAAAGAGGCTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RVPRLGSMIRTL*SLQAEQKRLPL Trigger: CAATGGCAGCCTCTTTTGCTCAGCTTGCAAGGACAAGAGCGTCCGAATCATCGATCCTAGGCGGGGCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTGCCCAGGAACTTGGGGTTaGCTGCGCAGAAGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVGWAGRGDGPLKYLGICPGTWG*LRRRCC Trigger: ACAGCACCTTCTGCGCAGTCAACCCCAAGTTCCTGG...GCAAATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTCCAAAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTTGTCACAACCTGCACTaGGAAGCACATTTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFQKSGGASNLGPRLWRGCHNLH*EAHFGL Trigger: CAGCCCGAAATGTGCTTCTCAGTGCAGGTTGTGACA...ACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTTTGGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR TCA 90 bp | TCCAAAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAATTGGATTAGCATCCTaGCCGCTCACCCAATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQVVLPTWAPGCGEVQIGLAS*PLTQSS Trigger: AGAGGATTGGGTGAGCGGTCAGGATGCTAATCCAAT...TTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTGCAGGCGCCTCCACCACTaGCTTCCACAATCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVGWAGRGDGPLKYLGICRRLHH*LPQSLP Trigger: TGGCAGTGATTGTGGAAGCCAGTGGTGGAGGCGCCT...GCAAATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| 3UTR CAA 72 bp | CCCCGCCTAGGATCGATGATTCGGACGCTCTTGTCCTaGCAAGCTGAGCAAAAGAGGCTGCCATTGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRLGSMIRTLLS*QAEQKRLPLWF Trigger: GAACCACAATGGCAGCCTCTTTTGCTCAGCTTGCAAGGACAAGAGCGTCCGAATCATCGATCCTAGGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236397.2 |
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| CDS-3UTR TCA 90 bp | GGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTCATTCTTGACCGGCTaGCCGAATACATGCCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGSGLGRSRRWSLKVLGNSFLTG*PNTCRN Trigger: ATTCCGGCATGTATTCGGTCAGCCGGTCAAGAATGA...ATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTCCAAAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTCTGATCCACTGGCAATaGCTTCATCATTGTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IFQKSGGASNLGPRLWRGLIHWQ*LHHCGD Trigger: GTCCCCACAATGATGAAGTCATTGCCAGTGGATCAG...ACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTTTGGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAATACATGCCGGAATTTaGTCTGCCGCACAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PISAAFSGEGAVGWAGRGIHAGI*SAAQLF Trigger: GAAAAGTTGTGCGGCAGAGCAAATTCCGGCATGTAT...TCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR GCA 90 bp | TGGTGTGACCTGGCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGATACATGCCGGAATTTaGTCTGCCGCACAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WCDLATEARWEGLEEAVSIHAGI*SAAQLF Trigger: GAAAAGTTGTGCGGCAGAGCAAATTCCGGCATGTAT...CGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGCCAGGTCACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR GCA 90 bp | GGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTGGTAGGCCTTGTCAATaGGGCCCGTCTTGTTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAVGWAGRGDGPLKYLGIGRPCQ*GPSCLE Trigger: CTCTAAACAAGACGGGCCGCATTGACAAGGCCTACC...AATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGGTCAGCCCATTTTCTaGAATCTGCCATACCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVRWCFQPGPQAVERCKLGQPIF*NLPYHD Trigger: GTCATGGTATGGCAGATTCCAGAAAATGGGCTGACC...CAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
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| CDS-3UTR CCA 90 bp | CCCATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGAAGACATAGACCACACTaGTGTCTGGGTCATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PISAAFSGEGAVGWAGRGRHRPH*CLGHKR Trigger: CCTTTTATGACCCAGACACCAGTGTGGTCTATGTCT...TCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTGCCGGAATTTGCTCTaGCGCACAACTTTTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAVGWAGRGDGPLKYLGICRNLL*RTTFRK Trigger: CTTCCGAAAAGTTGTGCGGCAGAGCAAATTCCGGCA...AATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTGACGGTACAGCTCCTCTaGAGTGCCCACATTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGLGRSRRWSLKVLGNLTVQLL*SAHIPD Trigger: ATCTGGAATGTGGGCACTGCAGAGGAGCTGTACCGT...CAAATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATGAGGTCAGACTTTCTTaGCACAGTCATGACTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSGLGRSRRWSLKVLGNEVRLS*HSHDYG Trigger: CCCATAGTCATGACTGTGCCAAGAAAGTCTGACCTC...ATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTGCTGCCGGAATTTGCTCTaGCGCACAACTTTTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVGWAGRGDGPLKYLGICCRNLL*RTTFRK Trigger: CTTCCGAAAAGTTGTGCGGCAGAGCAAATTCCGGCA...GCAAATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTGCCTTGGTACAAAAATCTTCCGTCAGCTAGAAAGATaGCCCGCATGGGCCGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGDGPLKYLGICLGTKIFRQLER*PAWAGP Trigger: GGGCCCGGCCCATGCGGGCCATCTTTCTAGCTGACG...GAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACCATCTCCTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | GGTCCCTTAAAGTACTTGGGAATTTGCCTTGGTACAAAAATCTTCCAAAAGTCATCCATGCGGCCCAGCTaGTCCTCCAGGCGGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GPLKYLGICLGTKIFQKSSMRPS*SSRRLI Trigger: TATCAGCCGCCTGGAGGAGCAGCTGGGCCGCATGGA...TGACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | TGGTCCCTTAAAGTACTTGGGAATTTGCCTTGGTACAAAAATCTTCCAAAAGTCGGGGACATCAGTAACTaGAGTAGCTGTGGAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSLKVLGNLPWYKNLPKVGDISN*SSCGGS Trigger: GGAGCCTCCACAGCTACTGCAGTTACTGATGTCCCC...GACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR GCA 90 bp | CGAGGAGATGGTCCCTTAAAGTACTTGGGAATTTGCCTTGGTACAAAAATCTTCCACATTGTCACAACCTaGACTGAGAAGCACATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGDGPLKYLGICLGTKIFHIVTT*TEKHIS Trigger: CGAAATGTGCTTCTCAGTGCAGGTTGTGACAATGTG...GAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACCATCTCCTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CAA 90 bp | GCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGTCCCCGTTCTCCCTGCTCCTaGACCAGCATCCGGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATEARWEGLEEAVSGAGPRSPCS*TSIRSA Trigger: GGCACTCCGGATGCTGGTCAAGGAGCAGGGAGAACG...GGGACCTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS GCA 90 bp | TTTCGGGCTGTGGGGTGCCAGGTGATAATGCCCACGCGCTTGGTATaGCCCTCGAGCACCACTACTGGCTCTGTCAGAGGGGAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRAVGCQVIMPTRLV*PSSTTTGSVRGEVS Trigger: GCTGACCTCCCCTCTGACAGAGCCAGTAGTGGTGCTCGAGGGGCATACCAAGCGCGTGGGCATTATCACCTGGCACCCCACAGCCCGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008893.9 ENSMUST00000123874.8 ENSMUST00000237125.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGCAAACTGGCTGTGACCTGCCACAGAGGCACTGAGCAGCCAACTGCCTGGGCCAGGAACTTGGGGTaGACTGCGCAGAAGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCKLAVTCHRGTEQPTAWARNLG*TAQKVL Trigger: CAGCACCTTCTGCGCAGTCAACCCCAAGTTCCTGGC...CCAGGCAGTTGGCTGCTCAGTGCCTCTGTGGCAGGTCACAGCCAGTTTGCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCTCTGCTGCTTTTTCTGGTGAGGGGGCAGTGGGTTGGGCAGGTCGAGGACAAAAGAGGCTGCCATaGTGGTTCCAGCTCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PISAAFSGEGAVGWAGRGQKRLP*WFQLTL Trigger: CAACGTGAGCTGGAACCACAATGGCAGCCTCTTTTG...TCCTCGACCTGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGCGGACGCTCTTGTCCTaGCAAGCTGAGCAAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVRWCFQPGPQAVERCKLRTLLS*QAEQKR Trigger: CCTCTTTTGCTCAGCTTGCAAGGACAAGAGCGTCCG...CAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCTGTGACCCCCTCTGGGGTTCTTaGCTGGTAAATGTATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VVLPTWAPGCGEVQTGCDPLWGS*LVNVFR Trigger: CCTGAATACATTTACCAGCAAAGAACCCCAGAGGGG...GTCACAGCCAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
||
| CDS-3UTR CAA 90 bp | GCCACAGAAGCTAGGTGGGAAGGGTTGGAGGAGGCAGTGTCGGGAGCAGGTCCCAATACATGCCGGAATTaGCTCTGCCGCACAACTTTT | + |
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Preference number: 5 (lower is better) Translates to: ATEARWEGLEEAVSGAGPNTCRN*LCRTTF Trigger: AAAAGTTGTGCGGCAGAGCAAATTCCGGCATGTATT...GGGACCTGCTCCCGACACTGCCTCCTCCAACCCTTCCCACCTAGCTTCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR CAA 90 bp | GGGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATGACCTTCAGGTCCCGTaGTTTACTGGGCACATAGGC | + |
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Preference number: 5 (lower is better) Translates to: GGSGLGRSRRWSLKVLGNDLQVP*FTGHIG Trigger: GCCTATGTGCCCAGTAAACAACGGGACCTGAAGGTC...ATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
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| CDS-3UTR CAA 90 bp | GGGGCAGTGGGTTGGGCAGGTCGAGGAGATGGTCCCTTAAAGTACTTGGGAATTCTGGCAATTTCACACTaGCTGACCTCCAAGCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GAVGWAGRGDGPLKYLGILAISH*LTSKPL Trigger: GAGGGGCTTGGAGGTCAGCAAGTGTGAAATTGCCAG...AATTCCCAAGTACTTTAAGGGACCATCTCCTCGACCTGCCCAACCCACTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
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| CDS-3UTR CAA 90 bp | AAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTGCAAACTGGCAATGACTTCATCATaGTGGGGACACCAGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: KVRWCFQPGPQAVERCKLAMTSS*WGHQSI Trigger: TATTGACTGGTGTCCCCACAATGATGAAGTCATTGC...CAGTTTGCACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR CAA 90 bp | ATCTTCCAAAAGTCAGGTGGTGCTTCCAACCTGGGCCCCAGGCTGTGGAGAGGTAATACATGCCGGAATTaGCTCTGCCGCACAACTTTT | + |
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Preference number: 5 (lower is better) Translates to: IFQKSGGASNLGPRLWRGNTCRN*LCRTTF Trigger: AAAAGTTGTGCGGCAGAGCAAATTCCGGCATGTATT...ACCTCTCCACAGCCTGGGGCCCAGGTTGGAAGCACCACCTGACTTTTGGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR CAA 90 bp | GGTCCCTTAAAGTACTTGGGAATTTGCCTTGGTACAAAAATCTTCCAAAAGTCAGCCAGGAACTTGGGGTaGACTGCGCAGAAGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GPLKYLGICLGTKIFQKSARNLG*TAQKVL Trigger: CAGCACCTTCTGCGCAGTCAACCCCAAGTTCCTGGC...TGACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000008893.9 ENSMUST00000236397.2 |
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| CDS-3UTR CAA 90 bp | GGTCCCTTAAAGTACTTGGGAATTTGCCTTGGTACAAAAATCTTCCAAAAGTCACTGTCTGATAGCACGTaGCGCCGGCTGACCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GPLKYLGICLGTKIFQKSLSDST*RRLTFR Trigger: CCTGAAGGTCAGCCGGCGCAACGTGCTATCAGACAG...TGACTTTTGGAAGATTTTTGTACCAAGGCAAATTCCCAAGTACTTTAAGGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008893.9 |
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| CDS CAA 72 bp | CGGGCTGTGGGGTGCCAGGTGATAATGCCCACGCGCTaGGTATGCCCCTCGAGCACCACTACTGGCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RAVGCQVIMPTR*VCPSSTTTGSV Trigger: GACAGAGCCAGTAGTGGTGCTCGAGGGGCATACCAAGCGCGTGGGCATTATCACCTGGCACCCCACAGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008893.9 ENSMUST00000123874.8 ENSMUST00000237125.2 |
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| CDS GCA 72 bp | GTGGGGTGCCAGGTGATAATGCCCACGCGCTTGGTATaGCCCTCGAGCACCACTACTGGCTCTGTCAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VGCQVIMPTRLV*PSSTTTGSVRG Trigger: CCCTCTGACAGAGCCAGTAGTGGTGCTCGAGGGGCATACCAAGCGCGTGGGCATTATCACCTGGCACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008893.9 ENSMUST00000123874.8 ENSMUST00000237125.2 |
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