Pregenerated sensors for CORO1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030707Ensembl transcript IDs: ENSMUST00000032949.14, ENSMUST00000106364.8, ENSMUST00000131415.8, ENSMUST00000173108.8, ENSMUST00000205515.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGAGCACAGGGGCAGTGTaGCCGCAGACCAGGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRSTGAV*PQTRGT Trigger: CGTGCCCCTGGTCTGCGGCCACACTGCCCCTGTGCT...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGCACAGCTGCCCCAGTaGCCACGTCCCACACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRAQLPQ*PRPTPG Trigger: TCCTGGTGTGGGACGTGGGCACTGGGGCAGCTGTGC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCAGCGTCAGCACAGCTaGCCCAGTGCCCACGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRQRQHS*PSAHVP Trigger: TGGGACGTGGGCACTGGGGCAGCTGTGCTGACGCTG...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGGCAGGGTCGGGTCCTaGAGTGGGCGGATACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRGRVGS*SGRIQV Trigger: GACCTGTATCCGCCCACTGCAGGACCCGACCCTGCC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGAGCACAGGGGCAGTGTaGCCGCAGACCAGGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAESTGAV*PQTRGT Trigger: CGTGCCCCTGGTCTGCGGCCACACTGCCCCTGTGCT...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGTTCTGGGCTGTGGGGTaGCAGGCCACGATGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRFWAVG*QATMPT Trigger: GGTTGGCATCGTGGCCTGGCACCCCACAGCCCAGAA...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGCAGCGTCAGCACAGCTaGCCCAGTGCCCACGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEQRQHS*PSAHVP Trigger: TGGGACGTGGGCACTGGGGCAGCTGTGCTGACGCTG...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCGTGGCGGAATTTGCTaGAGCGAACCACCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRRGGIC*SEPPAG Trigger: GCCGGCAGGTGGTTCGCTCCAGCAAATTCCGCCACG...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGGTCGGGTCCTGCAGTaGGCGGATACAGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRGRVLQ*ADTGPP Trigger: AGGAGGACCTGTATCCGCCCACTGCAGGACCCGACC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGTGCCAGGCCACGATaGCAACCCTCTTGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEGARPR*QPSWCG Trigger: GCCACACCAAGAGGGTTGGCATCGTGGCCTGGCACC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGTTCTGGGCTGTGGGGTaGCAGGCCACGATGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEFWAVG*QATMPT Trigger: GGTTGGCATCGTGGCCTGGCACCCCACAGCCCAGAA...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGCGTGGCGGAATTTGCTaGAGCGAACCACCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAERGGIC*SEPPAG Trigger: GCCGGCAGGTGGTTCGCTCCAGCAAATTCCGCCACG...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCTGGTCAGCCTTGGCTaGCTGTCCAAACACGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRLVSLG*LSKHVA Trigger: CGCCACGTGTTTGGACAGCCAGCCAAGGCTGACCAG...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGCCGAGTCCCCTCATaGGGACGGTCCTTTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEGRVPS*GRSFSA Trigger: GGCTGAAAAGGACCGTCCCCATGAGGGGACTCGGCC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGTCGGGTCCTGCAGTaGGCGGATACAGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEGRVLQ*ADTGPP Trigger: AGGAGGACCTGTATCCGCCCACTGCAGGACCCGACC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGACACGTGGCGGAATTTaGTGGAGCGAACCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRTRGGI*WSEPPA Trigger: GGCAGGTGGTTCGCTCCAGCAAATTCCGCCACGTGT...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGAGTGGCTCCTCCAGGTaGTTTGTGTCCCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAESGSSR*FVSHSA Trigger: GGCGCTGTGGGACACAAAGCACCTGGAGGAGCCACT...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGTAGCAGGACTCCGCTaGTTGTGTCCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRVAGLR*LCPAPA Trigger: TGCAGGAGCTGGACACAAGCAGCGGAGTCCTGCTAC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGCTGGTCAGCCTTGGCTaGCTGTCCAAACACGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAELVSLG*LSKHVA Trigger: CGCCACGTGTTTGGACAGCCAGCCAAGGCTGACCAG...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCTCCTGCAGGGACAGTaGCTCCTCCAGGTGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRLLQGQ*LLQVLC Trigger: ACAAAGCACCTGGAGGAGCCACTGTCCCTGCAGGAG...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
||
| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCAGCTCCCTGCTCTTTaGGGGCACGTAGCCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRQLPAL*GHVAIL Trigger: AAGGATGGCTACGTGCCCCCAAAGAGCAGGGAGCTG...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGACACGTGGCGGAATTTaGTGGAGCGAACCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAETRGGI*WSEPPA Trigger: GGCAGGTGGTTCGCTCCAGCAAATTCCGCCACGTGT...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR GCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGTAGCAGGACTCCGCTaGTTGTGTCCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEVAGLR*LCPAPA Trigger: TGCAGGAGCTGGACACAAGCAGCGGAGTCCTGCTAC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGGCTGTCCAAACACGTaGCGGAATTTGCTGGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRGCPNT*RNLLER Trigger: TCGCTCCAGCAAATTCCGCCACGTGTTTGGACAGCC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGAGCACTGGTCAGCCTTaGCTGGCTGTCCAAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRSTGQP*LAVQTR Trigger: ACGTGTTTGGACAGCCAGCCAAGGCTGACCAGTGCT...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCCAACCCTCTTGGTGTaGCCCTCCAAGGTGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRPTLLV*PSKVMT Trigger: TGTCATCACCTTGGAGGGCCACACCAAGAGGGTTGG...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGCTCCTGCAGGGACAGTaGCTCCTCCAGGTGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAELLQGQ*LLQVLC Trigger: ACAAAGCACCTGGAGGAGCCACTGTCCCTGCAGGAG...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGCAGCTCCCTGCTCTTTaGGGGCACGTAGCCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEQLPAL*GHVAIL Trigger: AAGGATGGCTACGTGCCCCCAAAGAGCAGGGAGCTG...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGAGCACTGGTCAGCCTTaGCTGGCTGTCCAAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAESTGQP*LAVQTR Trigger: ACGTGTTTGGACAGCCAGCCAAGGCTGACCAGTGCT...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGCCAACCCTCTTGGTGTaGCCCTCCAAGGTGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEPTLLV*PSKVMT Trigger: TGTCATCACCTTGGAGGGCCACACCAAGAGGGTTGG...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGCTTCCAGGCCACGTTTaGGCATGTAGCCCATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAELPGHV*ACSPYH Trigger: GTGGTATGGGCTACATGCCCAAACGTGGCCTGGAAG...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR TCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGTCCCAAGTGGTTTGTaGGACGCGCACATCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEVPSGL*DAHILI Trigger: TATGAGGATGTGCGCGTCTCACAAACCACTTGGGAC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR TCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGCTCACTCATGCGACTaGAACCCGTGGTTAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRAHSCD*NPWLES Trigger: AGATTCTAACCACGGGTTTCAGTCGCATGAGTGAGC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGAGCCACTGTCCCAAGTaGTTTGTGAGACGCGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAESHCPK*FVRRAH Trigger: ATGTGCGCGTCTCACAAACCACTTGGGACAGTGGCT...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGATACAGGTCCTCCTaGAACAGGTCCGACTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEGYRSS*NRSDFL Trigger: TAGAAAGTCGGACCTGTTCCAGGAGGACCTGTATCC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGTAGCTTTTGCACTATaGCGTTCAGATTCCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRVAFAL*RSDSSR Trigger: ACGTGAGGAATCTGAACGCCATAGTGCAAAAGCTAC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR TCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGAGACTCCTTGGAACTaGACATGGAAAGATAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRETPWN*TWKDNA Trigger: TGCATTATCTTTCCATGTTCAGTTCCAAGGAGTCTC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR TCA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGAGACTCCTTGGAACTaGACATGGAAAGATAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEETPWN*TWKDNA Trigger: TGCATTATCTTTCCATGTTCAGTTCCAAGGAGTCTC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGGAAGCTTATAGAATCTaGCAATCTCACACTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSSYSPYGLRVGWEQREAYRI*QSHTYS Trigger: TGAATAAGTGTGAGATTGCCAGATTCTATAAGCTTC...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCAGGACTCCGCTGCTaGTGTCCAGCTCCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEAGLRC*CPAPAG Trigger: CCCTGCAGGAGCTGGACACAAGCAGCGGAGTCCTGC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCTCCTCCAGGTGCTTaGTGTCCCACAGCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: FIIFVLFTIWPEGGVGAEAPPGA*CPTAPP Trigger: AGGTGGCGCTGTGGGACACAAAGCACCTGGAGGAGC...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGAACACGTGGCGGAATTaGCTGGAGCGAACCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRNTWRN*LERTTC Trigger: GCAGGTGGTTCGCTCCAGCAAATTCCGCCACGTGTT...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGTCTACTCGTCCAGTCTaGCCTAGGGGTAGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRSTRPV*PRGSTR Trigger: CCTGGTGCTACCCCTAGGCAAGACTGGACGAGTAGA...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGACGATGCCAACCCTCTaGGTGTGGCCCTCCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: FIIFVLFTIWPEGGVGAETMPTL*VWPSKV Trigger: CACCTTGGAGGGCCACACCAAGAGGGTTGGCATCGT...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGATGACACGAACTCGCTaGTCACGGCAGGAGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRMTRTR*SRQEVQ Trigger: CTGCACCTCCTGCCGTGACAAGCGAGTTCGTGTCAT...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGTCAGCTCCCTGCTCTTaGGGGGCACGTAGCCATCCT | + |
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Preference number: 5 (lower is better) Translates to: FIIFVLFTIWPEGGVGAESAPCS*GARSHP Trigger: AGGATGGCTACGTGCCCCCAAAGAGCAGGGAGCTGA...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGAACACGTGGCGGAATTaGCTGGAGCGAACCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: FIIFVLFTIWPEGGVGAENTWRN*LERTTC Trigger: GCAGGTGGTTCGCTCCAGCAAATTCCGCCACGTGTT...CTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGATCAGAGCCATGAACTaGGGGTTGACAGCGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRIRAMN*GLTAQK Trigger: CTTCTGCGCTGTCAACCCCAAGTTCATGGCTCTGAT...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS-3UTR CAA 90 bp | TTATTATTTTCGTCTTATTCACCATATGGCCTGAGGGTGGGGTGGGAGCAGAGGCACACCAGGATCACATaGTCACAACCTGCGCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LLFSSYSPYGLRVGWEQRHTRIT*SQPALR Trigger: TCTCAGCGCAGGTTGTGACAATGTGATCCTGGTGTG...CCTCTGCTCCCACCCCACCCTCAGGCCATATGGTGAATAAGACGAAAATAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS GCA 72 bp | GTCCGGGTGCACATCCGGGCCCAGCGTCAGCACAGCTaGCCCAGTGCCCACGTCCCACACCAGGATCACATT | + |
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Preference number: 6 (lower is better) Translates to: VRVHIRAQRQHS*PSAHVPHQDHI Trigger: AATGTGATCCTGGTGTGGGACGTGGGCACTGGGGCAGCTGTGCTGACGCTGGGCCCGGATGTGCACCCGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS GCA 72 bp | GCACATCCGGGCCCAGCGTCAGCACAGCTGCCCCAGTaGCCACGTCCCACACCAGGATCACATTGTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: AHPGPASAQLPQ*PRPTPGSHCHN Trigger: GTTGTGACAATGTGATCCTGGTGTGGGACGTGGGCACTGGGGCAGCTGTGCTGACGCTGGGCCCGGATGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS CAA 90 bp | TCAGCCACAACAGTGCCTTTGCGAGGCTCGATGACACGAACTCGCTaGTCACGGCAGGAGGTGCAGATGAGAGCACCGTCCCGGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SATTVPLRGSMTRTR*SRQEVQMRAPSRLQ Trigger: CTGGAGCCGGGACGGTGCTCTCATCTGCACCTCCTGCCGTGACAAGCGAGTTCGTGTCATCGAGCCTCGCAAAGGCACTGTTGTGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS GCA 72 bp | GGCTCCTCCAGGTGCTTTGTGTCCCACAGCGCCACCTaGCGCTCACTCATGCGACTGAAACCCGTGGTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GSSRCFVSHSAT*RSLMRLKPVVR Trigger: TCTAACCACGGGTTTCAGTCGCATGAGTGAGCGGCAGGTGGCGCTGTGGGACACAAAGCACCTGGAGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS CCA 72 bp | GTCCAGGCCCCTGTTGACCCTCAGCTCCCTGCTCTTTaGGGGCACGTAGCCATCCTTGAGGGAAATGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VQAPVDPQLPAL*GHVAILEGNEE Trigger: CTCCTCATTTCCCTCAAGGATGGCTACGTGCCCCCAAAGAGCAGGGAGCTGAGGGTCAACAGGGGCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 |
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| CDS CAA 72 bp | GCTGCCCCAGTGCCCACGTCCCACACCAGGATCACATaGTCACAACCTGCGCTGAGAAGCACATTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AAPVPTSHTRIT*SQPALRSTFWA Trigger: AGCCCAGAATGTGCTTCTCAGCGCAGGTTGTGACAATGTGATCCTGGTGTGGGACGTGGGCACTGGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS CAA 72 bp | ACAGTGCCTTTGCGAGGCTCGATGACACGAACTCGCTaGTCACGGCAGGAGGTGCAGATGAGAGCACCGTCC | + |
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Preference number: 6 (lower is better) Translates to: TVPLRGSMTRTR*SRQEVQMRAPS Trigger: GGACGGTGCTCTCATCTGCACCTCCTGCCGTGACAAGCGAGTTCGTGTCATCGAGCCTCGCAAAGGCACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS CCA 72 bp | GACACAAACACAGCGTGCACTGGCCGAGTCCCCTCATaGGGACGGTCCTTTTCAGCCACAACAGTGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: DTNTACTGRVPS*GRSFSATTVPL Trigger: CAAAGGCACTGTTGTGGCTGAAAAGGACCGTCCCCATGAGGGGACTCGGCCAGTGCACGCTGTGTTTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS TCA 72 bp | CCTTTTCAGCCACAACAGTGCCTTTGCGAGGCTCGATaGCACGAACTCGCTTGTCACGGCAGGAGGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PFQPQQCLCEAR*HELACHGRRCR Trigger: TCTGCACCTCCTGCCGTGACAAGCGAGTTCGTGTCATCGAGCCTCGCAAAGGCACTGTTGTGGCTGAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS CAA 72 bp | TCATGGGGACGGTCCTTTTCAGCCACAACAGTGCCTTaGCGAGGCTCGATGACACGAACTCGCTTGTCACGG | + |
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Preference number: 6 (lower is better) Translates to: SWGRSFSATTVP*RGSMTRTRLSR Trigger: CCGTGACAAGCGAGTTCGTGTCATCGAGCCTCGCAAAGGCACTGTTGTGGCTGAAAAGGACCGTCCCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000131415.8 ENSMUST00000173108.8 ENSMUST00000205515.2 |
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| CDS TCA 72 bp | GCATGTAGCCCATACCACGCTGAGACTCCTTGGAACTaGACATGGAAAGATAATGCAGGAACGGAGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: ACSPYHAETPWN*TWKDNAGTEPQ Trigger: CTGAGGCTCCGTTCCTGCATTATCTTTCCATGTTCAGTTCCAAGGAGTCTCAGCGTGGTATGGGCTACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032949.14 ENSMUST00000106364.8 ENSMUST00000173108.8 |
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| CDS TCA 72 bp | TATGGCGTTCAGATTCCTCACGTCCTCCTCCAGCCTTaGCACGGTATCCTTTCTAGGCACTGTCATGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: YGVQIPHVLLQP*HGILSRHCHGN Trigger: ATTGCCATGACAGTGCCTAGAAAGGATACCGTGTCAAGGCTGGAGGAGGACGTGAGGAATCTGAACGCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173108.8 |
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