Pregenerated sensors for COQ9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031782Ensembl transcript IDs: ENSMUST00000034234.15, ENSMUST00000159871.4, ENSMUST00000211859.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCAATGCAAAAGGCATCAGGAGGCCAGGCCTGGCATTAGGAACTaGAGAAGTGGCCCAGTCCCAGGTCAGAACGGCAGCAAGTGCATT | + |
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Preference number: 1 (lower is better) Translates to: LQCKRHQEARPGIRN*RSGPVPGQNGSKCI Trigger: AATGCACTTGCTGCCGTTCTGACCTGGGACTGGGCCACTTCTTCAGTTCCTAATGCCAGGCCTGGCCTCCTGATGCCTTTTGCATTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR GCA 90 bp | TGGTTTGAAACCTTGGATGTGAGTCTCAGTTTTCAAACACACAGCTaGAATGCAAAAGGCATCAGGAGGCCAGGCCTGGCATTAGGAACT | + |
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Preference number: 1 (lower is better) Translates to: WFETLDVSLSFQTHS*NAKGIRRPGLALGT Trigger: AGTTCCTAATGCCAGGCCTGGCCTCCTGATGCCTTTTGCATTGCAGCTGTGTGTTTGAAAACTGAGACTCACATCCAAGGTTTCAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CCA 90 bp | CTCCAAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTaGCCCATCTTGTCAAAGCCCTTCATATCTACTGCTGCTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LQVLQCVLINILFNG*PILSKPFISTAAPP Trigger: GGGAGGAGCAGCAGTAGATATGAAGGGCTTTGACAAGATGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR TCA 90 bp | GATGCCTGTGACACCATGGCAGAGTCATGCCAAGGTTTTGTGGTTTaGAACCTTGGATGTGAGTCTCAGTTTTCAAACACACAGCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: DACDTMAESCQGFVV*NLGCESQFSNTQLQ Trigger: TTGCAGCTGTGTGTTTGAAAACTGAGACTCACATCCAAGGTTTCAAACCACAAAACCTTGGCATGACTCTGCCATGGTGTCACAGGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CCA 90 bp | GAGCAATTCTATGGTCAAGACATGATCAAGATGCCTGTGACACCATaGCAGAGTCATGCCAAGGTTTTGTGGTTTGAAACCTTGGATGTG | + |
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Preference number: 1 (lower is better) Translates to: EQFYGQDMIKMPVTP*QSHAKVLWFETLDV Trigger: CACATCCAAGGTTTCAAACCACAAAACCTTGGCATGACTCTGCCATGGTGTCACAGGCATCTTGATCATGTCTTGACCATAGAATTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR-3UTR CCA 90 bp | GCACTGTCTGCCCTGTGCTGGGGAAGAGCTCCCACTATGTGTTGCCTCCGGACCATCCTGTTCAATGGGTaGCCCATCTTGTCAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ALSALCWGRAPTMCCLRTILFNG*PILSKP Trigger: GGGCTTTGACAAGATGGGCCACCCATTGAACAGGAT...GGTCCGGAGGCAACACATAGTGGGAGCTCTTCCCCAGCACAGGGCAGACAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CAA 90 bp | GTGAGCACTGTCTGCCCTGTGCTGGGGAAGAGCTCCCACTATGTGTaGCCTCCGGACCTTGGTTGTGAGCCCCTAAGAATATTTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VSTVCPVLGKSSHYV*PPDLGCEPLRIFLR Trigger: CCTGAGAAATATTCTTAGGGGCTCACAACCAAGGTCCGGAGGCAACACATAGTGGGAGCTCTTCCCCAGCACAGGGCAGACAGTGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGAGTGCTGAGAATACAGACGTAGGTCACCATGCCCAGCTCCTAGAGAGCTTGAAACCTTGGATGTaGGTCTCAGTTTTCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: LLSAENTDVGHHAQLLESLKPWM*VSVFKH Trigger: GTGTTTGAAAACTGAGACTCACATCCAAGGTTTCAA...GCTCTCTAGGAGCTGGGCATGGTGACCTACGTCTGTATTCTCAGCACTCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR-3UTR GCA 90 bp | GACAGGATCACACTCTGTAGCTCAAGCAGGCTTGTAATTCTCTACAAAGACAAGGCCCTTCATATCTACTaGTGCTCCTCCCAGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: DRITLCSSSRLVILYKDKALHIY*CSSQAH Trigger: ATGTGCCTGGGAGGAGCAGCAGTAGATATGAAGGGC...CTTGTCTTTGTAGAGAATTACAAGCCTGCTTGAGCTACAGAGTGTGATCCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR-3UTR GCA 90 bp | GACAGGATCACACTCTGTAGCTCAAGCAGGCTTGTAATTCTCTACAAAGACAAGAACACACAGCTGCAATaGAAAAGGCATCAGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: DRITLCSSSRLVILYKDKNTQLQ*KRHQEA Trigger: GGCCTCCTGATGCCTTTTGCATTGCAGCTGTGTGTT...CTTGTCTTTGTAGAGAATTACAAGCCTGCTTGAGCTACAGAGTGTGATCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR-3UTR GCA 90 bp | TCTACAAAGACAAGCCTGCCTCTGATCTCTCAATCCTGCTGTAGCAGTCTCCTGTTTCAAACACACAGCTaGAATGCAAAAGGCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: STKTSLPLISQSCCSSLLFQTHS*NAKGIR Trigger: CCTGATGCCTTTTGCATTGCAGCTGTGTGTTTGAAA...CAGGAGACTGCTACAGCAGGATTGAGAGATCAGAGGCAGGCTTGTCTTTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGAGGGGATCCAGAGACAATGGCCAGTGGCAAATGTTTGTGAGCACTGTCCATGCCAAGGTTTTGTaGTTTGAAACCTTGGATGTG | + |
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Preference number: 2 (lower is better) Translates to: FLRGSRDNGQWQMFVSTVHAKVL*FETLDV Trigger: CACATCCAAGGTTTCAAACCACAAAACCTTGGCATG...GACAGTGCTCACAAACATTTGCCACTGGCCATTGTCTCTGGATCCCCTCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTGGCCCATCTTGTCTTCATATCTACTGCTaGTCCTCCCAGGCACATGGT | + |
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Preference number: 2 (lower is better) Translates to: KFFSVFSLTSCSMGGPSCLHIYC*SSQAHG Trigger: ACCATGTGCCTGGGAGGAGCAGCAGTAGATATGAAG...ACAAGATGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CAA 90 bp | GTGACACCATGGCAGAGTCATGCCAAGGTTTTGTGGTTTGAAACCTaGGATGTGAGTCTCAGTTTTCAAACACACAGCTGCAATGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VTPWQSHAKVLWFET*DVSLSFQTHSCNAK Trigger: TTTTGCATTGCAGCTGTGTGTTTGAAAACTGAGACTCACATCCAAGGTTTCAAACCACAAAACCTTGGCATGACTCTGCCATGGTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CAA 90 bp | ATGATCAAGATGCCTGTGACACCATGGCAGAGTCATGCCAAGGTTTaGTGGTTTGAAACCTTGGATGTGAGTCTCAGTTTTCAAACACAC | + |
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Preference number: 2 (lower is better) Translates to: MIKMPVTPWQSHAKV*WFETLDVSLSFQTH Trigger: GTGTGTTTGAAAACTGAGACTCACATCCAAGGTTTCAAACCACAAAACCTTGGCATGACTCTGCCATGGTGTCACAGGCATCTTGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CCA 72 bp | GGCAGCTTTCTGAGGGGATCCAGAGACAATGGCCAGTaGCAAATGTTTGTGAGCACTGTCTGCCCTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GSFLRGSRDNGQ*QMFVSTVCPVL Trigger: CAGCACAGGGCAGACAGTGCTCACAAACATTTGCCACTGGCCATTGTCTCTGGATCCCCTCAGAAAGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR GCA 72 bp | GACAATGGCCAGTGGCAAATGTTTGTGAGCACTGTCTaGCCTGTGCTGGGGAAGAGCTCCCACTATGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: DNGQWQMFVSTV*PVLGKSSHYVL Trigger: CAACACATAGTGGGAGCTCTTCCCCAGCACAGGGCAGACAGTGCTCACAAACATTTGCCACTGGCCATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR GCA 72 bp | TCTACAAAGACAAGCCTGCCTCTGATCTCTCAATCCTaGTGTAGCAGTCTCCTGAGTGCTGAGAATACAGAC | + |
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Preference number: 3 (lower is better) Translates to: STKTSLPLISQS*CSSLLSAENTD Trigger: GTCTGTATTCTCAGCACTCAGGAGACTGCTACAGCAGGATTGAGAGATCAGAGGCAGGCTTGTCTTTGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CCA 72 bp | TATGGTCAAGACATGATCAAGATGCCTGTGACACCATaGCAGAGTCATGCCAAGGTTTTGTGGTTTGAAACC | + |
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Preference number: 3 (lower is better) Translates to: YGQDMIKMPVTP*QSHAKVLWFET Trigger: GGTTTCAAACCACAAAACCTTGGCATGACTCTGCCATGGTGTCACAGGCATCTTGATCATGTCTTGACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR TCA 72 bp | GACACCATGGCAGAGTCATGCCAAGGTTTTGTGGTTTaGAACCTTGGATGTGAGTCTCAGTTTTCAAACACA | + |
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Preference number: 3 (lower is better) Translates to: DTMAESCQGFVV*NLGCESQFSNT Trigger: TGTGTTTGAAAACTGAGACTCACATCCAAGGTTTCAAACCACAAAACCTTGGCATGACTCTGCCATGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR TCA 72 bp | GTCATGCCAAGGTTTTGTGGTTTGAAACCTTGGATGTaGGTCTCAGTTTTCAAACACACAGCTGCAATGCAA | + |
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Preference number: 3 (lower is better) Translates to: VMPRFCGLKPWM*VSVFKHTAAMQ Trigger: TTGCATTGCAGCTGTGTGTTTGAAAACTGAGACTCACATCCAAGGTTTCAAACCACAAAACCTTGGCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | GCACTGTCTGCCCTGTGCTGGGGAAGAGCTCCCACTATGTGTTGCCTCCGGACCGAGTGGGGAGGCTGCTaGTTCTGCTCTTCTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: ALSALCWGRAPTMCCLRTEWGGC*FCSSED Trigger: GTCTTCAGAAGAGCAGAAGCAGCAGCCTCCCCACTC...GGTCCGGAGGCAACACATAGTGGGAGCTCTTCCCCAGCACAGGGCAGACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | GCACTGTCTGCCCTGTGCTGGGGAAGAGCTCCCACTATGTGTTGCCTCCGGACCTGTCTTCCTCTTCTCTaGCTGGCCCAGTTGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: ALSALCWGRAPTMCCLRTCLPLL*LAQLHQ Trigger: CTGGTGCAACTGGGCCAGGCAGAGAAGAGGAAGACA...GGTCCGGAGGCAACACATAGTGGGAGCTCTTCCCCAGCACAGGGCAGACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR TCA 90 bp | CTGATCTCTCAATCCTGCTGTAGCAGTCTCCTGAGTGCTGAGAATACAGACGTAGGAGCAGGAGGATGCTaGGGGCCCGGGGCCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LISQSCCSSLLSAENTDVGAGGC*GPGASA Trigger: AGCACTGGCCCCGGGCCCTCAGCATCCTCCTGCTCC...TACGTCTGTATTCTCAGCACTCAGGAGACTGCTACAGCAGGATTGAGAGATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | GGGTGGCCCATCTTGTCAAAGCCCTTCATATCTACTGCTGCTCCTCCCAGGCACCCCAAACATGCTGGCTaGTGCGCTGGAGAGACCCAA | + |
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Preference number: 4 (lower is better) Translates to: GWPILSKPFISTAAPPRHPKHAG*CAGETQ Trigger: TTGGGTCTCTCCAGCGCAGCAGCCAGCATGTTTGGG...GTGCCTGGGAGGAGCAGCAGTAGATATGAAGGGCTTTGACAAGATGGGCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | CTCCTGAGTGCTGAGAATACAGACGTAGGTCACCATGCCCAGCTCCTAGAGAGCGCACCCATCAGTCCTTaGACCAGTGCCTCTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: LLSAENTDVGHHAQLLESAPISP*TSASPV Trigger: CACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGC...GCTCTCTAGGAGCTGGGCATGGTGACCTACGTCTGTATTCTCAGCACTCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | GGTGGCCCATCTTGTCAAAGCCCTTCATATCTACTGCTGCTCCTCCCAGGCACAAACCCCACGGCAGTGTaGAAGGCACGTGGCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGPSCQSPSYLLLLLPGTNPTAV*KARGTR Trigger: TCTGGTGCCACGTGCCTTCCACACTGCCGTGGGGTT...TGTGCCTGGGAGGAGCAGCAGTAGATATGAAGGGCTTTGACAAGATGGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | AGCAGTCTCCTGAGTGCTGAGAATACAGACGTAGGTCACCATGCCCAGCTCCTAAGTGTGGAAGGCACGTaGCACCAGAGCTGGTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSLLSAENTDVGHHAQLLSVEGT*HQSWSA Trigger: TGCCGACCAGCTCTGGTGCCACGTGCCTTCCACACT...TAGGAGCTGGGCATGGTGACCTACGTCTGTATTCTCAGCACTCAGGAGACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| 3UTR CAA 72 bp | GTCTGCCCTGTGCTGGGGAAGAGCTCCCACTATGTGTaGCCTCCGGACCTTGGTTGTGAGCCCCTAAGAATA | + |
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Preference number: 4 (lower is better) Translates to: VCPVLGKSSHYV*PPDLGCEPLRI Trigger: TATTCTTAGGGGCTCACAACCAAGGTCCGGAGGCAACACATAGTGGGAGCTCTTCCCCAGCACAGGGCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR TCA 90 bp | TTTTCAAACACACAGCTGCAATGCAAAAGGCATCAGGAGGCCAGGCCTGGCATTCTTCCAGCACCTGGTTaGGGCGAGCATTGCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: FSNTQLQCKRHQEARPGILPAPG*GEHCTG Trigger: CCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAG...AATGCCAGGCCTGGCCTCCTGATGCCTTTTGCATTGCAGCTGTGTGTTTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | TTTTCAAACACACAGCTGCAATGCAAAAGGCATCAGGAGGCCAGGCCTGGCATTCCCGTGGACTTCACCTaGTTAGCCGTGTGGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: FSNTQLQCKRHQEARPGIPVDFT*LAVWPM Trigger: CATGGGCCACACGGCTAAGCAGGTGAAGTCCACGGG...AATGCCAGGCCTGGCCTCCTGATGCCTTTTGCATTGCAGCTGTGTGTTTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | TGTCAAAGCCCTTCATATCTACTGCTGCTCCTCCCAGGCACATGGTTCCCTTCTGCTGTCAAGATGCGGTaGTGTAGCTGCTCCTCACTC | + |
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Preference number: 4 (lower is better) Translates to: CQSPSYLLLLLPGTWFPSAVKMR*CSCSSL Trigger: GAGTGAGGAGCAGCTACAGCACCGCATCTTGACAGC...AGAAGGGAACCATGTGCCTGGGAGGAGCAGCAGTAGATATGAAGGGCTTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | TTTTCAAACACACAGCTGCAATGCAAAAGGCATCAGGAGGCCAGGCCTGGCATTTCTGCCTGGCCCAGTTaGACCAGCTTCTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSNTQLQCKRHQEARPGISAWPS*TSFCSS Trigger: AGAGGAGCAGAAGCTGGTGCAACTGGGCCAGGCAGA...AATGCCAGGCCTGGCCTCCTGATGCCTTTTGCATTGCAGCTGTGTGTTTGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | GACTCCAAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTGGCCCATGCTGGCTGCTGCGCTaGAGAGACCCAAGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: DSKFFSVFSLTSCSMGGPCWLLR*RDPRTG Trigger: CCCAGTCCTTGGGTCTCTCCAGCGCAGCAGCCAGCA...TGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTTGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR TCA 90 bp | CATGATCAAGATGCCTGTGACACCATGGCAGAGTCATGCCAAGGTTTTGTGGTTCATCCACCATGCTGGTaGGCAAGTTCAGGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: HDQDACDTMAESCQGFVVHPPCW*ASSGWV Trigger: CACCCAGCCTGAACTTGCTCACCAGCATGGTGGATG...AACCACAAAACCTTGGCATGACTCTGCCATGGTGTCACAGGCATCTTGATCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | TTTTCAAACACACAGCTGCAATGCAAAAGGCATCAGGAGGCCAGGCCTGGCATTAAACATGCTGGCTGCTaGGCTGGAGAGACCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: FSNTQLQCKRHQEARPGIKHAGC*AGETQG Trigger: TCCTTGGGTCTCTCCAGCGCAGCAGCCAGCATGTTT...AATGCCAGGCCTGGCCTCCTGATGCCTTTTGCATTGCAGCTGTGTGTTTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | CTGATCTCTCAATCCTGCTGTAGCAGTCTCCTGAGTGCTGAGAATACAGACGTACAGTCCTTGCACCAGTaGCTCTCCCGTGGACTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LISQSCCSSLLSAENTDVQSLHQ*LSRGLH Trigger: GTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTG...TACGTCTGTATTCTCAGCACTCAGGAGACTGCTACAGCAGGATTGAGAGATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | TCTACAAAGACAAGCCTGCCTCTGATCTCTCAATCCTGCTGTAGCAGTCTCCTGTCTGCAGTCCAGCCATaGGCAGGCACAAACTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: STKTSLPLISQSCCSSLLSAVQP*AGTNSR Trigger: CCTAGAGTTTGTGCCTGCCCATGGCTGGACTGCAGA...CAGGAGACTGCTACAGCAGGATTGAGAGATCAGAGGCAGGCTTGTCTTTGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | CATGATCAAGATGCCTGTGACACCATGGCAGAGTCATGCCAAGGTTTTGTGGTTGGGCTCCTTCAGCAATaGCCTCTGCAGTCCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HDQDACDTMAESCQGFVVGLLQQ*PLQSSH Trigger: ATGGCTGGACTGCAGAGGCCATTGCTGAAGGAGCCC...AACCACAAAACCTTGGCATGACTCTGCCATGGTGTCACAGGCATCTTGATCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | GCTGAGAATACAGACGTAGGTCACCATGCCCAGCTCCTAGAGAGCAATTCTATGCAAGTTCAGGCTGGGTaGGATGTTGTGAGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AENTDVGHHAQLLESNSMQVQAG*DVVREQ Trigger: CTGCTCCCTCACAACATCCCACCCAGCCTGAACTTG...CATAGAATTGCTCTCTAGGAGCTGGGCATGGTGACCTACGTCTGTATTCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | AGGTCACCATGCCCAGCTCCTAGAGAGCAATTCTATGGTCAAGACATGATCAAGTCTGGTCTGTGTACCTaGGGGGTGGACGGGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: RSPCPAPREQFYGQDMIKSGLCT*GVDGKT Trigger: AGTTTTCCCGTCCACCCCCCAGGTACACAGACCAGA...CTTGATCATGTCTTGACCATAGAATTGCTCTCTAGGAGCTGGGCATGGTGACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR TCA 90 bp | AAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTGGCCCATCTTGTCTGGGTGGGATGTTGTaGGGGAGCAGGAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: KFFSVFSLTSCSMGGPSCLGGML*GSRRML Trigger: CAGCATCCTCCTGCTCCCTCACAACATCCCACCCAG...ACAAGATGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | TCCAGCCTTGTGGCTGTCATACGACTCCAAGTTCTTCAGTGTGTTCTCATTAACGAAGAGTGGGGAGGCTaGTGCTTCTGCTCTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSLVAVIRLQVLQCVLINEEWGG*CFCSSE Trigger: TTCAGAAGAGCAGAAGCAGCAGCCTCCCCACTCTTC...GTTAATGAGAACACACTGAAGAACTTGGAGTCGTATGACAGCCACAAGGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | AAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTGGCCCATCTTGTCTGTTGTGTTGTAGATaGCGGCCAGCACTGCACGGC | + |
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Preference number: 4 (lower is better) Translates to: KFFSVFSLTSCSMGGPSCLLCCR*RPALHG Trigger: GCCGTGCAGTGCTGGCCGGCATCTACAACACAACAG...ACAAGATGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | TGTCAAAGCCCTTCATATCTACTGCTGCTCCTCCCAGGCACATGGTTCCCTTCTGTGGCCCATGTTCATTaGATCATTAATCCGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: CQSPSYLLLLLPGTWFPSVAHVH*IINPVF Trigger: GAAAACCGGATTAATGATGCAATGAACATGGGCCAC...AGAAGGGAACCATGTGCCTGGGAGGAGCAGCAGTAGATATGAAGGGCTTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | GACAGGATCACACTCTGTAGCTCAAGCAGGCTTGTAATTCTCTACAAAGACAAGCACTGGGTCACAAAGTaGAGAATCAGCTCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: DRITLCSSSRLVILYKDKHWVTK*RISSLP Trigger: TGGCAGTGAGCTGATTCTGCACTTTGTGACCCAGTG...CTTGTCTTTGTAGAGAATTACAAGCCTGCTTGAGCTACAGAGTGTGATCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | AAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTGGCCCATCTTGTCAGTCTGGTTTCCACTaGATCCCTCAGGAACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KFFSVFSLTSCSMGGPSCQSGFH*IPQELV Trigger: GACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTG...ACAAGATGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | GACAGGATCACACTCTGTAGCTCAAGCAGGCTTGTAATTCTCTACAAAGACAAGACCTGCTTAGCCGTGTaGCCCATGTTCATTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DRITLCSSSRLVILYKDKTCLAV*PMFIAS Trigger: TGATGCAATGAACATGGGCCACACGGCTAAGCAGGT...CTTGTCTTTGTAGAGAATTACAAGCCTGCTTGAGCTACAGAGTGTGATCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR GCA 90 bp | TCATACGACTCCAAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTTCTGGGGAGGAATCCTaGATCATCACCAGCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SYDSKFFSVFSLTSCSMGSGEES*IITSSV Trigger: AACAGAGCTGGTGATGATGCAGGATTCCTCCCCAGA...ACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTTGGAGTCGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | AAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTGGCCCATCTTGTTCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFFSVFSLTSCSMGGPSCSAFSV*FPLHPS Trigger: TGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGA...ACAAGATGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CCA 90 bp | AAGTTCTTCAGTGTGTTCTCATTAACATCCTGTTCAATGGGTGGCCCATCTTGTCGTATCTTCAAAGTCTaGGGAGGAATCCTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KFFSVFSLTSCSMGGPSCRIFKV*GGILHH Trigger: ATGATGCAGGATTCCTCCCCAGACTTTGAAGATACG...ACAAGATGGGCCACCCATTGAACAGGATGTTAATGAGAACACACTGAAGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS GCA 90 bp | GGCACCAGAGCTGGTCGGCAGCGGGCCACGGGCAGGCACCGCAGCTaGAGGAGCCTCCAGCCCAAGCGGCCGAGGACACCAGACACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTRAGRQRATGRHRS*RSLQPKRPRTPDTA Trigger: AGCCGTGTCTGGTGTCCTCGGCCGCTTGGGCTGGAGGCTCCTGCAGCTGCGGTGCCTGCCCGTGGCCCGCTGCCGACCAGCTCTGGTGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 90 bp | GGCTGCTGCTTCTGCTCTTCTGAAGACCGGAACCCCACGGCAGTGTaGAAGGCACGTGGCACCAGAGCTGGTCGGCAGCGGGCCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCCFCSSEDRNPTAV*KARGTRAGRQRATG Trigger: GCCCGTGGCCCGCTGCCGACCAGCTCTGGTGCCACGTGCCTTCCACACTGCCGTGGGGTTCCGGTCTTCAGAAGAGCAGAAGCAGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 90 bp | TCGCTCCCAAACATGCTGGCTGCTGCGCTGGAGAGACCCAAGGACTaGGCTCCTTCAGCAATGGCCTCTGCAGTCCAGCCATGGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPNMLAAALERPKD*APSAMASAVQPWAG Trigger: GCCTGCCCATGGCTGGACTGCAGAGGCCATTGCTGAAGGAGCCCAGTCCTTGGGTCTCTCCAGCGCAGCAGCCAGCATGTTTGGGAGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 90 bp | AGACCCGTCAGGTTCTTGAGCGTGACCGCTGCACCCATCAGTCCTTaGACCAGTGCCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPVRFLSVTAAPISP*TSASPVDFTCLAVW Trigger: CCACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGGTCACGCTCAAGAACCTGACGGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS TCA 90 bp | ATGCTGCTGAGAAGAAGAGTGGGGAGGCTGCTGCTTCTGCTCTTCTaGAGACCGGAACCCCACGGCAGTGTGGAAGGCACGTGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLLRRRVGRLLLLLF*RPEPHGSVEGTWHQ Trigger: CTGGTGCCACGTGCCTTCCACACTGCCGTGGGGTTCCGGTCTTCAGAAGAGCAGAAGCAGCAGCCTCCCCACTCTTCTTCTCAGCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 90 bp | GTGCAGAATCAGCTCACTGCCATCGCTCCCAAACATGCTGGCTGCTaGGCTGGAGAGACCCAAGGACTGGGCTCCTTCAGCAATGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQNQLTAIAPKHAGC*AGETQGLGSFSNGL Trigger: GAGGCCATTGCTGAAGGAGCCCAGTCCTTGGGTCTCTCCAGCGCAGCAGCCAGCATGTTTGGGAGCGATGGCAGTGAGCTGATTCTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 90 bp | CAGGTTCTTGAGCGTGACCGCTGCACCCATCAGTCCTTGCACCAGTaGCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTGGCCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLERDRCTHQSLHQ*LSRGLHLLSRVAHV Trigger: AACATGGGCCACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGGTCACGCTCAAGAACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS TCA 90 bp | CCTGGCCCAGTTGCACCAGCTTCTGCTCCTCTTCCAGCACCTGGTTaGGGCGAGCATTGCACTGGGTCACAAAGTGCAGAATCAGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPVAPASAPLPAPG*GEHCTGSQSAESAH Trigger: GTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGAGGAGCAGAAGCTGGTGCAACTGGGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS TCA 90 bp | TGGACTGGTCCCCAGCGTAATGCCACATGTCATCCACCATGCTGGTaGGCAAGTTCAGGCTGGGTGGGATGTTGTGAGGGAGCAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WTGPQRNATCHPPCW*ASSGWVGCCEGAGG Trigger: TCCTCCTGCTCCCTCACAACATCCCACCCAGCCTGAACTTGCTCACCAGCATGGTGGATGACATGTGGCATTACGCTGGGGACCAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS GCA 90 bp | AAAGTGCAGAATCAGCTCACTGCCATCGCTCCCAAACATGCTGGCTaGTGCGCTGGAGAGACCCAAGGACTGGGCTCCTTCAGCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KVQNQLTAIAPKHAG*CAGETQGLGSFSNG Trigger: GCCATTGCTGAAGGAGCCCAGTCCTTGGGTCTCTCCAGCGCAGCAGCCAGCATGTTTGGGAGCGATGGCAGTGAGCTGATTCTGCACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 90 bp | CTGCATCATCACCAGCTCTGTTGTGTTGTAGATGCCGGCCAGCACTaGACGGCGGGTGTACCAGTTAAAGTCAGTGGACTGGTCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHHHQLCCVVDAGQH*TAGVPVKVSGLVPS Trigger: GCTGGGGACCAGTCCACTGACTTTAACTGGTACACCCGCCGTGCAGTGCTGGCCGGCATCTACAACACAACAGAGCTGGTGATGATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS CCA 90 bp | TCTGCCTGGCCCAGTTGCACCAGCTTCTGCTCCTCTTCCAGCACCTaGTTGAGGCGAGCATTGCACTGGGTCACAAAGTGCAGAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAWPSCTSFCSSSST*LRRALHWVTKCRIS Trigger: GCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGAGGAGCAGAAGCTGGTGCAACTGGGCCAGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 90 bp | CAGTCCAGCCATGGGCAGGCACAAACTCTAGGGCTGCTGTCAAGATaGGGTGCTGTAGCTGCTCCTCACTCTCATAGTCCTCTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSSHGQAQTLGLLSR*GAVAAPHSHSPLPP Trigger: AGGAGGAAGAGGACTATGAGAGTGAGGAGCAGCTACAGCACCGCATCTTGACAGCAGCCCTAGAGTTTGTGCCTGCCCATGGCTGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 90 bp | CTGCATCATCACCAGCTCTGTTGTGTTGTAGATGCCGGCCAGCACTaGACGGCGGGTGTACCAGTTAAACCGGGGCCAGTGCTCAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHHHQLCCVVDAGQH*TAGVPVKPGPVLNV Trigger: TACATTGAGCACTGGCCCCGGTTTAACTGGTACACCCGCCGTGCAGTGCTGGCCGGCATCTACAACACAACAGAGCTGGTGATGATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159871.4 |
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| CDS GCA 90 bp | CAAGTTCTTCAGTGTGTTCGCTGCACCCATCAGTCCTTGCACCAGTaGCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTGGCCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLQCVRCTHQSLHQ*LSRGLHLLSRVAHV Trigger: AACATGGGCCACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTGAAGAACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS GCA 90 bp | TACGACTCCAAGTTCTTCAGTGTGTTCGCTGCACCCATCAGTCCTTaGACCAGTGCCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YDSKFFSVFAAPISP*TSASPVDFTCLAVW Trigger: CCACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTGAAGAACTTGGAGTCGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS CCA 90 bp | TCACAAAGTGCAGAATCAGCTCACTGCCATCGCTCCCAAACATGCTaGCTGCTGCGCTGGAGAGACCCAAGGACTGGGCTCCTTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SQSAESAHCHRSQTC*LLRWRDPRTGLLQQ Trigger: TTGCTGAAGGAGCCCAGTCCTTGGGTCTCTCCAGCGCAGCAGCCAGCATGTTTGGGAGCGATGGCAGTGAGCTGATTCTGCACTTTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 90 bp | GGGCCCGGGGCCAGTGCTCAATGTAGGGGATCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCAGGAACTGGTCTGTCTTCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPGASAQCRGSAFSV*FPLHPSGTGLSSSS Trigger: AGAAGAGGAAGACAGACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGATCCCCTACATTGAGCACTGGCCCCGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS GCA 90 bp | TCTTCCAGCACCTGGTTGAGGCGAGCATTGCACTGGGTCACAAAGTaGAGAATCAGCTCACTGCCATCGCTCCCAAACATGCTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSTWLRRALHWVTK*RISSLPSLPNMLAA Trigger: AGCAGCCAGCATGTTTGGGAGCGATGGCAGTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 90 bp | AGCCTTGTGGCTGTCATACGACTCCAAGTTCTTCAGTGTGTTCGCTaGACCCATCAGTCCTTGCACCAGTGCCTCTCCCGTGGACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLVAVIRLQVLQCVR*THQSLHQCLSRGLH Trigger: GTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTGAAGAACTTGGAGTCGTATGACAGCCACAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS CCA 90 bp | AGCTTCTGCTCCTCTTCCAGCACCTGGTTGAGGCGAGCATTGCACTaGGTCACAAAGTGCAGAATCAGCTCACTGCCATCGCTCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFCSSSSTWLRRALH*VTKCRISSLPSLPN Trigger: GTTTGGGAGCGATGGCAGTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGAGGAGCAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS-3UTR CAA 90 bp | AGGTCACCATGCCCAGCTCCTAGAGAGCAATTCTATGGTCAAGACATGATCAAGTGCACCCATCAGTCCTaGCACCAGTGCCTCTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RSPCPAPREQFYGQDMIKCTHQS*HQCLSR Trigger: ACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCA...CTTGATCATGTCTTGACCATAGAATTGCTCTCTAGGAGCTGGGCATGGTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CAA 90 bp | GCTGAGAATACAGACGTAGGTCACCATGCCCAGCTCCTAGAGAGCAATTCTATGTGGTTGAGGCGAGCATaGCACTGGGTCACAAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AENTDVGHHAQLLESNSMWLRRA*HWVTKC Trigger: GCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCA...CATAGAATTGCTCTCTAGGAGCTGGGCATGGTGACCTACGTCTGTATTCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS GCA 90 bp | CTCTCCCGTGGACTTCACCTGCTTAGCCGTGTGGCCCATGTTCATTaGATCATTAATCCGGTTTTCCAGGAAGCGCCACGTATCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSRGLHLLSRVAHVH*IINPVFQEAPRIFK Trigger: TTTGAAGATACGTGGCGCTTCCTGGAAAACCGGATTAATGATGCAATGAACATGGGCCACACGGCTAAGCAGGTGAAGTCCACGGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 ENSMUST00000211859.2 |
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| CDS-3UTR CAA 90 bp | GAAACCTTGGATGTGAGTCTCAGTTTTCAAACACACAGCTGCAATGCAAAAGGCTCTTCCAGCACCTGGTaGAGGCGAGCATTGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ETLDVSLSFQTHSCNAKGSSSTW*RRALHW Trigger: CCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGA...GCCTTTTGCATTGCAGCTGTGTGTTTGAAAACTGAGACTCACATCCAAGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS-3UTR CAA 90 bp | TCCAGCCTTGTGGCTGTCATACGACTCCAAGTTCTTCAGTGTGTTCTCATTAACTCATCACCAGCTCTGTaGTGTTGTAGATGCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLVAVIRLQVLQCVLINSSPAL*CCRCRP Trigger: TGGCCGGCATCTACAACACAACAGAGCTGGTGATGA...GTTAATGAGAACACACTGAAGAACTTGGAGTCGTATGACAGCCACAAGGCTGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS CCA 90 bp | ATCATTAATCCGGTTTTCCAGGAAGCGCCACGTATCTTCAAAGTCTaGGGAGGAATCCTGCATCATCACCAGCTCTGTTGTGTTGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: IINPVFQEAPRIFKV*GGILHHHQLCCVVD Trigger: ATCTACAACACAACAGAGCTGGTGATGATGCAGGATTCCTCCCCAGACTTTGAAGATACGTGGCGCTTCCTGGAAAACCGGATTAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 ENSMUST00000211859.2 |
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| CDS GCA 72 bp | GCTGGTCGGCAGCGGGCCACGGGCAGGCACCGCAGCTaGAGGAGCCTCCAGCCCAAGCGGCCGAGGACACCA | + |
|
Preference number: 6 (lower is better) Translates to: AGRQRATGRHRS*RSLQPKRPRTP Trigger: TGGTGTCCTCGGCCGCTTGGGCTGGAGGCTCCTGCAGCTGCGGTGCCTGCCCGTGGCCCGCTGCCGACCAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 72 bp | CCCCACGGCAGTGTGGAAGGCACGTGGCACCAGAGCTaGTCGGCAGCGGGCCACGGGCAGGCACCGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PHGSVEGTWHQS*SAAGHGQAPQL Trigger: CAGCTGCGGTGCCTGCCCGTGGCCCGCTGCCGACCAGCTCTGGTGCCACGTGCCTTCCACACTGCCGTGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 72 bp | TTCTGCTCTTCTGAAGACCGGAACCCCACGGCAGTGTaGAAGGCACGTGGCACCAGAGCTGGTCGGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FCSSEDRNPTAV*KARGTRAGRQR Trigger: CCGCTGCCGACCAGCTCTGGTGCCACGTGCCTTCCACACTGCCGTGGGGTTCCGGTCTTCAGAAGAGCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | GAGCGTGACCGCTGCACCCATCAGTCCTTGCACCAGTaGCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ERDRCTHQSLHQ*LSRGLHLLSRV Trigger: CACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGGTCACGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | CACCAGCTCTGTTGTGTTGTAGATGCCGGCCAGCACTaGACGGCGGGTGTACCAGTTAAACCGGGGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HQLCCVVDAGQH*TAGVPVKPGPV Trigger: CACTGGCCCCGGTTTAACTGGTACACCCGCCGTGCAGTGCTGGCCGGCATCTACAACACAACAGAGCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159871.4 |
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| CDS CCA 72 bp | AACATGCTGGCTGCTGCGCTGGAGAGACCCAAGGACTaGGCTCCTTCAGCAATGGCCTCTGCAGTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: NMLAAALERPKD*APSAMASAVQP Trigger: TGGCTGGACTGCAGAGGCCATTGCTGAAGGAGCCCAGTCCTTGGGTCTCTCCAGCGCAGCAGCCAGCATGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS TCA 72 bp | AGAAGAAGAGTGGGGAGGCTGCTGCTTCTGCTCTTCTaGAGACCGGAACCCCACGGCAGTGTGGAAGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RRRVGRLLLLLF*RPEPHGSVEGT Trigger: CGTGCCTTCCACACTGCCGTGGGGTTCCGGTCTTCAGAAGAGCAGAAGCAGCAGCCTCCCCACTCTTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | CAGTGTGTTCGCTGCACCCATCAGTCCTTGCACCAGTaGCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QCVRCTHQSLHQ*LSRGLHLLSRV Trigger: CACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS CAA 72 bp | AGTCTGGGGAGGAATCCTGCATCATCACCAGCTCTGTaGTGTTGTAGATGCCGGCCAGCACTGCACGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGRNPASSPAL*CCRCRPALHGG Trigger: CCCGCCGTGCAGTGCTGGCCGGCATCTACAACACAACAGAGCTGGTGATGATGCAGGATTCCTCCCCAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 ENSMUST00000211859.2 |
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| CDS CAA 72 bp | CAGGTTCTTGAGCGTGACCGCTGCACCCATCAGTCCTaGCACCAGTGCCTCTCCCGTGGACTTCACCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QVLERDRCTHQS*HQCLSRGLHLL Trigger: AAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGGTCACGCTCAAGAACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS GCA 72 bp | TTCCTCTTCTCTGCCTGGCCCAGTTGCACCAGCTTCTaGTCCTCTTCCAGCACCTGGTTGAGGCGAGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: FLFSAWPSCTSF*SSSSTWLRRAL Trigger: CAATGCTCGCCTCAACCAGGTGCTGGAAGAGGAGCAGAAGCTGGTGCAACTGGGCCAGGCAGAGAAGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | AGGTTCTTGAGCGTGACCGCTGCACCCATCAGTCCTTaGACCAGTGCCTCTCCCGTGGACTTCACCTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RFLSVTAAPISP*TSASPVDFTCL Trigger: TAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGGTCACGCTCAAGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 72 bp | CCCAGTTGCACCAGCTTCTGCTCCTCTTCCAGCACCTaGTTGAGGCGAGCATTGCACTGGGTCACAAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSCTSFCSSSST*LRRALHWVTKC Trigger: GCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGAGGAGCAGAAGCTGGTGCAACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CAA 90 bp | TGCACCAGCTTCTGCTCCTCTTCCAGCACCTGGTTGAGGCGAGCATaGCACTGGGTCACAAAGTGCAGAATCAGCTCACTGCCATCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CTSFCSSSSTWLRRA*HWVTKCRISSLPSL Trigger: GAGCGATGGCAGTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGAGGAGCAGAAGCTGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS TCA 72 bp | CCCCAGCGTAATGCCACATGTCATCCACCATGCTGGTaGGCAAGTTCAGGCTGGGTGGGATGTTGTGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQRNATCHPPCW*ASSGWVGCCEG Trigger: TCCCTCACAACATCCCACCCAGCCTGAACTTGCTCACCAGCATGGTGGATGACATGTGGCATTACGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS GCA 72 bp | CATTGCACTGGGTCACAAAGTGCAGAATCAGCTCACTaGCATCGCTCCCAAACATGCTGGCTGCTGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: HCTGSQSAESAH*HRSQTCWLLRW Trigger: CCAGCGCAGCAGCCAGCATGTTTGGGAGCGATGGCAGTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | CACCAGCTCTGTTGTGTTGTAGATGCCGGCCAGCACTaGACGGCGGGTGTACCAGTTAAAGTCAGTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: HQLCCVVDAGQH*TAGVPVKVSGL Trigger: CAGTCCACTGACTTTAACTGGTACACCCGCCGTGCAGTGCTGGCCGGCATCTACAACACAACAGAGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034234.15 |
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| CDS CAA 90 bp | ATACGACTCCAAGTTCTTCAGTGTGTTCGCTGCACCCATCAGTCCTaGCACCAGTGCCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: IRLQVLQCVRCTHQS*HQCLSRGLHLLSRV Trigger: CACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTGAAGAACTTGGAGTCGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS GCA 72 bp | CATGGGCAGGCACAAACTCTAGGGCTGCTGTCAAGATaGGGTGCTGTAGCTGCTCCTCACTCTCATAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: HGQAQTLGLLSR*GAVAAPHSHSP Trigger: AGGACTATGAGAGTGAGGAGCAGCTACAGCACCGCATCTTGACAGCAGCCCTAGAGTTTGTGCCTGCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | GCTGTCATACGACTCCAAGTTCTTCAGTGTGTTCGCTaGACCCATCAGTCCTTGCACCAGTGCCTCTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: AVIRLQVLQCVR*THQSLHQCLSR Trigger: ACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTGAAGAACTTGGAGTCGTATGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS CCA 72 bp | TCCTCTTCCAGCACCTGGTTGAGGCGAGCATTGCACTaGGTCACAAAGTGCAGAATCAGCTCACTGCCATCG | + |
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Preference number: 6 (lower is better) Translates to: SSSSTWLRRALH*VTKCRISSLPS Trigger: CGATGGCAGTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CAA 72 bp | CAAGTTCTTCAGTGTGTTCGCTGCACCCATCAGTCCTaGCACCAGTGCCTCTCCCGTGGACTTCACCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QVLQCVRCTHQS*HQCLSRGLHLL Trigger: AAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTGAAGAACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS CAA 90 bp | TATCTTCAAAGTCTGGGGAGGAATCCTGCATCATCACCAGCTCTGTaGTGTTGTAGATGCCGGCCAGCACTGCACGGCGGGTGTACCAGT | + |
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Preference number: 6 (lower is better) Translates to: YLQSLGRNPASSPAL*CCRCRPALHGGCTS Trigger: ACTGGTACACCCGCCGTGCAGTGCTGGCCGGCATCTACAACACAACAGAGCTGGTGATGATGCAGGATTCCTCCCCAGACTTTGAAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | ACCTGGTTGAGGCGAGCATTGCACTGGGTCACAAAGTaGAGAATCAGCTCACTGCCATCGCTCCCAAACATG | + |
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Preference number: 6 (lower is better) Translates to: TWLRRALHWVTK*RISSLPSLPNM Trigger: CATGTTTGGGAGCGATGGCAGTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS GCA 72 bp | AAGTTCTTCAGTGTGTTCGCTGCACCCATCAGTCCTTaGACCAGTGCCTCTCCCGTGGACTTCACCTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: KFFSVFAAPISP*TSASPVDFTCL Trigger: TAAGCAGGTGAAGTCCACGGGAGAGGCACTGGTGCAAGGACTGATGGGTGCAGCGAACACACTGAAGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211859.2 |
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| CDS CAA 72 bp | TTCTGCTCCTCTTCCAGCACCTGGTTGAGGCGAGCATaGCACTGGGTCACAAAGTGCAGAATCAGCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: FCSSSSTWLRRA*HWVTKCRISSL Trigger: CAGTGAGCTGATTCTGCACTTTGTGACCCAGTGCAATGCTCGCCTCAACCAGGTGCTGGAAGAGGAGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 72 bp | GCCAGTGCTCAATGTAGGGGATCAGCATTCTCAGTCTaGTTTCCACTGCATCCCTCAGGAACTGGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ASAQCRGSAFSV*FPLHPSGTGLS Trigger: AGACAGACCAGTTCCTGAGGGATGCAGTGGAAACCAGACTGAGAATGCTGATCCCCTACATTGAGCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 |
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| CDS CCA 72 bp | CCGGTTTTCCAGGAAGCGCCACGTATCTTCAAAGTCTaGGGAGGAATCCTGCATCATCACCAGCTCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PVFQEAPRIFKV*GGILHHHQLCC Trigger: ACAACAGAGCTGGTGATGATGCAGGATTCCTCCCCAGACTTTGAAGATACGTGGCGCTTCCTGGAAAACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 ENSMUST00000211859.2 |
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| CDS CCA 72 bp | AGTGCCTCTCCCGTGGACTTCACCTGCTTAGCCGTGTaGCCCATGTTCATTGCATCATTAATCCGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SASPVDFTCLAV*PMFIASLIRFS Trigger: GGAAAACCGGATTAATGATGCAATGAACATGGGCCACACGGCTAAGCAGGTGAAGTCCACGGGAGAGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034234.15 ENSMUST00000159871.4 ENSMUST00000211859.2 |
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