Pregenerated sensors for COQ7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030652Ensembl transcript IDs: ENSMUST00000032887.4, ENSMUST00000098090.10, ENSMUST00000209146.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTaGTGTCATGGTGAGAATCCTGACAGCCATTACATTTCTGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: FESFYRHRVPTDIVG*CHGENPDSHYISGP Trigger: CGGGCCAGAAATGTAATGGCTGTCAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| 3UTR CAA 90 bp | TCATCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATaGTCGGGTGATGTCATGGTGAGAATCCTGACAGCCATTACATTT | + |
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Preference number: 2 (lower is better) Translates to: SSTLNHFIDTEFPLT*SGDVMVRILTAITF Trigger: AAATGTAATGGCTGTCAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| 3UTR TCA 72 bp | TTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTaGTGTCATGGTGAGAATCCTGACAGCCATTACATT | + |
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Preference number: 3 (lower is better) Translates to: FYRHRVPTDIVG*CHGENPDSHYI Trigger: AATGTAATGGCTGTCAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | TCTGGCCCGAAGTCCAACAGAGCCAAAGAAACTCAGAAGGCAGTGGGACTGAGACACGGTGCAGGCCATTaGTCCTTCCTTCCCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SGPKSNRAKETQKAVGLRHGAGH*SFLPQQ Trigger: TTGCTGGGGAAGGAAGGAGCAATGGCCTGCACCGTG...TCTCAGTCCCACTGCCTTCTGAGTTTCTTTGGCTCTGTTGGACTTCGGGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | CCTGACAGCCATTACATTTCTGGCCCGAAGTCCAACAGAGCCAAAGAAACTCAGCCCCAGGGCAAAGCCTaGCACGTTCCACAAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PDSHYISGPKSNRAKETQPQGKA*HVPQGH Trigger: ATGCCCTTGTGGAACGTGGCAGGCTTTGCCCTGGGG...CTGAGTTTCTTTGGCTCTGTTGGACTTCGGGCCAGAAATGTAATGGCTGTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR TCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGATGCACGGCGGCACCCTaGGCAGCTCTGCGTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGCTAAP*AALRHG Trigger: ACCATGACGCAGAGCTGCTCAGGGTGCCGCCGTGCA...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | CACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTTACGACGCGGGAGCCAGCTCTaGGTCATGGTCCAGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: HSDNCTAPPPQISLLKLRRGSQL*VMVQAC Trigger: ACAGGCCTGGACCATGACGCAGAGCTGGCTCCCGCG...TCGTAACTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | ACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTCAGCAAGGCAGTTCCTaGCCCCAGGGCAAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: THTVITVQLLLHKYHSLSQQGSS*PQGKAC Trigger: GCAGGCTTTGCCCTGGGGGCAGGAACTGCCTTGCTG...ACTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | TCATCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTCAGCAAGGCAGTTCCTaGCCCCAGGGCAAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSTLNHFIDTEFPLTLSGQQGSS*PQGKAC Trigger: GCAGGCTTTGCCCTGGGGGCAGGAACTGCCTTGCTG...ACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACAGCAAGGCAGTTCCTaGCCCCAGGGCAAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGQQGSS*PQGKAC Trigger: GCAGGCTTTGCCCTGGGGGCAGGAACTGCCTTGCTG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCGAAGTCCAACAGAGCCAAAGAAACTCAGAAGGCAGTGGGACTGAGAACCATTGTGGAGAGAGATaGAAGCCAGCCAGAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: WPEVQQSQRNSEGSGTENHCGER*KPARTV Trigger: AACTGTTCTGGCTGGCTTCCATCTCTCTCCACAATG...GTTCTCAGTCCCACTGCCTTCTGAGTTTCTTTGGCTCTGTTGGACTTCGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | TTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGTCATGGTGAGAATCCACGGCCATTTGCCCTaGATAGATGCGGTTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FIDTEFPLTLSGDVMVRIHGHLP*IDAVCS Trigger: GGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTG...GATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | ACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTCCCCAGGGCAAAGCCTaGCACGTTCCACAAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: THTVITVQLLLHKYHSLSPQGKA*HVPQGH Trigger: ATGCCCTTGTGGAACGTGGCAGGCTTTGCCCTGGGG...ACTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACCCCAGGGCAAAGCCTaGCACGTTCCACAAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGPQGKA*HVPQGH Trigger: ATGCCCTTGTGGAACGTGGCAGGCTTTGCCCTGGGG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACACCCTGAGCAGCTCTaGGTCATGGTCCAGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGHPEQL*VMVQAC Trigger: ACAGGCCTGGACCATGACGCAGAGCTGCTCAGGGTG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGAGCATACGCGGGAGCCTaGGGAGAACAAAAGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGAYAGA*GEQKAA Trigger: CGCAGCCTTTTGTTCTCCGCAGGCTCCCGCGTATGC...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR CCA 90 bp | CAAAACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTGCCAGCTCTGCGTCATaGTCCAGGCCTGTATCGTGG | + |
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Preference number: 4 (lower is better) Translates to: QNTHSDNCTAPPPQISLLASSAS*SRPVSW Trigger: CCACGATACAGGCCTGGACCATGACGCAGAGCTGGC...AAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR CCA 90 bp | TCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGGCAGCTCTGCGTCATaGTCCAGGCCTGTATCGTGG | + |
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Preference number: 4 (lower is better) Translates to: STLNHFIDTEFPLTLSGDGSSAS*SRPVSW Trigger: CCACGATACAGGCCTGGACCATGACGCAGAGCTGCC...ATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | GAGTTCCCACTGACATTGTCGGGTGATGTCATGGTGAGAATCCTGACAGCCATTTGCATAGATGCGGTTTaGTCCATATTCACCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: EFPLTLSGDVMVRILTAICIDAV*SIFTSV Trigger: CACGCTGGTGAATATGGAGCAAACCGCATCTATGCA...AATGGCTGTCAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | CACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTTACGACACGGTGCAGGCCATTaGTCCTTCCTTCCCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: HSDNCTAPPPQISLLKLRHGAGH*SFLPQQ Trigger: TTGCTGGGGAAGGAAGGAGCAATGGCCTGCACCGTG...TCGTAACTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACACGGTGCAGGCCATTaGTCCTTCCTTCCCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGHGAGH*SFLPQQ Trigger: TTGCTGGGGAAGGAAGGAGCAATGGCCTGCACCGTG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | ATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGTCATGGTGAGAATCCTGCCTCTTCCATCAGCATaGGGATCTGGTTGTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: IDTEFPLTLSGDVMVRILPLPSA*GSGCCS Trigger: ACTACAACAACCAGATCCGCATGCTGATGGAAGAGG...CAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | ATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGTCATGGTGAGAATCCTGAACTGCTTGATGACCTaGAGCAGCTCCTCATACTTC | + |
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Preference number: 4 (lower is better) Translates to: IDTEFPLTLSGDVMVRILNCLMT*SSSSYF Trigger: GAAGTATGAGGAGCTGCTGCAGGTCATCAAGCAGTT...CAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | TTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGTCATGCTGAAAGGGCAGCTCTaGGTCATGGTCCAGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LNHFIDTEFPLTLSGDVMLKGQL*VMVQAC Trigger: ACAGGCCTGGACCATGACGCAGAGCTGCCCTTTCAG...CATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | CTGACAGCCATTACATTTCTGGCCCGAAGTCCAACAGAGCCAAAGAAACTCAGACATCACCCTGCACATTaGTGTTTCCCAGGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LTAITFLARSPTEPKKLRHHPAH*CFPGSP Trigger: TGGAGAACCTGGGAAACAGCAATGTGCAGGGTGATG...TCTGAGTTTCTTTGGCTCTGTTGGACTTCGGGCCAGAAATGTAATGGCTGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CCA 90 bp | ATCCTGACAGCCATTACATTTCTGGCCCGAAGTCCAACAGAGCCAAAGAAACTCGCTATGTTCACTGCCTaGGATCCTATAGCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ILTAITFLARSPTEPKKLAMFTA*DPIACS Trigger: ACTGCAGGCTATAGGATCCCAGGCAGTGAACATAGC...GAGTTTCTTTGGCTCTGTTGGACTTCGGGCCAGAAATGTAATGGCTGTCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CCA 90 bp | TTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGTCATGGTGAGAATCCTGTTGGCAGCATTGTaGAGAGAGATGGAAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FIDTEFPLTLSGDVMVRILLAAL*REMEAS Trigger: GCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAG...GATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGAAGCAGCTCTGCGTCATaGTCCAGGCCTGTATCGTGG | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGSSSAS*SRPVSW Trigger: CCACGATACAGGCCTGGACCATGACGCAGAGCTGCT...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR TCA 90 bp | TCATCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGGTAAAGCTGGGATTTaGACCCACGCCTCCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: SSTLNHFIDTEFPLTLSGGKAGI*THASLI Trigger: GATGAGGGAGGCGTGGGTTCAAATCCCAGCTTTACC...ACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACACGGCCATTTGCCCTaGATAGATGCGGTTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGHGHLP*IDAVCS Trigger: GGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | CCTGACAGCCATTACATTTCTGGCCCGAAGTCCAACAGAGCCAAAGAAACTCAGAGGTCGGACCCTGAATaGAATCATCAACTCGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PDSHYISGPKSNRAKETQRSDPE*NHQLVE Trigger: TTCAACGAGTTGATGATTGCATTCAGGGTCCGACCT...CTGAGTTTCTTTGGCTCTGTTGGACTTCGGGCCAGAAATGTAATGGCTGTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | ATTAACAAAACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACCACGGCCATTTGCCCTaGATAGATGCGGTTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: INKTHTVITVQLLLHKYHHGHLP*IDAVCS Trigger: GGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTG...GTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTTTTGTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR CCA 90 bp | CACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTTACGAGCACTGCATCCGGCCTaGATAATCCTCTTCAACAAG | + |
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Preference number: 4 (lower is better) Translates to: HSDNCTAPPPQISLLKLRALHPA*IILFNK Trigger: CTTGTTGAAGAGGATTATCCAGGCCGGATGCAGTGC...TCGTAACTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR CCA 90 bp | TCATCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTCTCTTCCCTGTCTGTTaGCAGCATTGTGGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSTLNHFIDTEFPLTLSGLFPVC*QHCGER Trigger: TCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAG...ACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| 3UTR CAA 72 bp | TTGAATCATTTTATAGACACCGAGTTCCCACTGACATaGTCGGGTGATGTCATGGTGAGAATCCTGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LNHFIDTEFPLT*SGDVMVRILTA Trigger: GGCTGTCAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | CACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTTACGATGCATAGATGCGGTTTaGTCCATATTCACCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: HSDNCTAPPPQISLLKLRCIDAV*SIFTSV Trigger: CACGCTGGTGAATATGGAGCAAACCGCATCTATGCA...TCGTAACTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGATGCATAGATGCGGTTTaGTCCATATTCACCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGCIDAV*SIFTSV Trigger: CACGCTGGTGAATATGGAGCAAACCGCATCTATGCA...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | CAAGCCCCAAACCCGGCCTCTTGTATTAACAAAACACACACAGTGATAACTGTAAGGTCGGACCCTGAATaGAATCATCAACTCGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: QAPNPASCINKTHTVITVRSDPE*NHQLVE Trigger: TTCAACGAGTTGATGATTGCATTCAGGGTCCGACCT...TACAGTTATCACTGTGTGTGTTTTGTTAATACAAGAGGCCGGGTTTGGGGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | AACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGCCTCTTCCATCAGCATaGGGATCTGGTTGTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: NTHSDNCTAPPPQISLLKPLPSA*GSGCCS Trigger: ACTACAACAACCAGATCCGCATGCTGATGGAAGAGG...CTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACCTCTTCCATCAGCATaGGGATCTGGTTGTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGPLPSA*GSGCCS Trigger: ACTACAACAACCAGATCCGCATGCTGATGGAAGAGG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | AACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGAACTGCTTGATGACCTaGAGCAGCTCCTCATACTTC | + |
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Preference number: 4 (lower is better) Translates to: NTHSDNCTAPPPQISLLKNCLMT*SSSSYF Trigger: GAAGTATGAGGAGCTGCTGCAGGTCATCAAGCAGTT...CTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGAAACTGCTTGATGACCTaGAGCAGCTCCTCATACTTC | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGNCLMT*SSSSYF Trigger: GAAGTATGAGGAGCTGCTGCAGGTCATCAAGCAGTT...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | AACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTTTGCCCTGCATAGATaGGGTTTGCTCCATATTCAC | + |
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Preference number: 4 (lower is better) Translates to: NTHSDNCTAPPPQISLLKFALHR*GLLHIH Trigger: GTGAATATGGAGCAAACCGCATCTATGCAGGGCAAA...CTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR GCA 90 bp | TCATCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTTTTGCCCTGCATAGATaGGGTTTGCTCCATATTCAC | + |
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Preference number: 4 (lower is better) Translates to: SSTLNHFIDTEFPLTLSGFALHR*GLLHIH Trigger: GTGAATATGGAGCAAACCGCATCTATGCAGGGCAAA...ACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGAAGGTCGGACCCTGAATaGAATCATCAACTCGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGRSDPE*NHQLVE Trigger: TTCAACGAGTTGATGATTGCATTCAGGGTCCGACCT...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR GCA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACGGAGAACAAAAGGCTaGGATGTACTAGATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TYSKTFLINIWLHCIRPGRRTKG*DVLDGR Trigger: TCTACCATCTAGTACATCGCAGCCTTTTGTTCTCCG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR CCA 90 bp | CAAAACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTTTTCTGATAAATATATaGCTGCACTGCATCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNTHSDNCTAPPPQISLLFLINI*LHCIRP Trigger: AGGCCGGATGCAGTGCAGCCATATATTTATCAGAAA...AAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS TCA 90 bp | CATCCCCGAACTGTGACACCTGATGATGAGGCCTCTTCCATACTCTaGGAAGGGCCTCCGGACACCAGTGCGCAGGCGTCCCACGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HPRTVTPDDEASSIL*EGPPDTSAQASHGS Trigger: GCTTCCGTGGGACGCCTGCGCACTGGTGTCCGGAGGCCCTTCTCAGAGTATGGAAGAGGCCTCATCATCAGGTGTCACAGTTCGGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS CCA 90 bp | GCATACGCGGGAGCCAGCTCTGCGTCATGGTCCAGGCCTGTATCGTaGTGTTCAAGCTCCTCATCGCGAAACTGCTTGATGACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AYAGASSASWSRPVS*CSSSSSRNCLMTCS Trigger: GCTGCAGGTCATCAAGCAGTTTCGCGATGAGGAGCTTGAACACCACGATACAGGCCTGGACCATGACGCAGAGCTGGCTCCCGCGTATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS GCA 90 bp | AATGACAGGGCCAACACTGGTCCGACCGAGCACGGCCATTTGCCCTaGATAGATGCGGTTTGCTCCATATTCACCAGCGTGATCCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: NDRANTGPTEHGHLP*IDAVCSIFTSVIHP Trigger: CGGGTGGATCACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGTCGGACCAGTGTTGGCCCTGTCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS GCA 90 bp | GTAGTGATTAGCGATAGACTCTTCTACCGCCACGGTGCAGGCCATTaGTCCTTCCTTCCCCAGCAAGGCAGTTCCTGCCCCCAGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VVISDRLFYRHGAGH*SFLPQQGSSCPQGK Trigger: TTTGCCCTGGGGGCAGGAACTGCCTTGCTGGGGAAGGAAGGAGCAATGGCCTGCACCGTGGCGGTAGAAGAGTCTATCGCTAATCACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS GCA 90 bp | GGCCTGGATAATCCTCTTCAACAAGGCATACGCGGGAGCCAGCTCTaGGTCATGGTCCAGGCCTGTATCGTGGTGTTCAAGCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLDNPLQQGIRGSQL*VMVQACIVVFKLLI Trigger: GATGAGGAGCTTGAACACCACGATACAGGCCTGGACCATGACGCAGAGCTGGCTCCCGCGTATGCCTTGTTGAAGAGGATTATCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS GCA 90 bp | GGCCAACACTGGTCCGACCGAGCACGGCCATTTGCCCTGCATAGATaGGGTTTGCTCCATATTCACCAGCGTGATCCACCCGAATTATTC | + |
|
Preference number: 5 (lower is better) Translates to: GQHWSDRARPFALHR*GLLHIHQRDPPELF Trigger: GAATAATTCGGGTGGATCACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGTCGGACCAGTGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS TCA 90 bp | CCCTGCCCGGTGAAGACATATAGCTTGGAATGTGTTTCCAGCTGTTaGGGCACTGAAAGGGCAGCTCTGCGTCATGGTCCAGGCCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PCPVKTYSLECVSSC*GTERAALRHGPGLY Trigger: ATACAGGCCTGGACCATGACGCAGAGCTGCCCTTTCAGTGCCTCAACAGCTGGAAACACATTCCAAGCTATATGTCTTCACCGGGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
||
| CDS TCA 90 bp | TTCACTGCCTGGGATCCTATAGCCTGCAGTGGTAAAGCTGGGATTTaGACCCACGCCTCCCTCATCACCCTGCACATTGCTGTTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTAWDPIACSGKAGI*THASLITLHIAVSQ Trigger: CTGGGAAACAGCAATGTGCAGGGTGATGAGGGAGGCGTGGGTTCAAATCCCAGCTTTACCACTGCAGGCTATAGGATCCCAGGCAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS GCA 90 bp | ACTGGTCCGACCGAGCACGGCCATTTGCCCTGCATAGATGCGGTTTaGTCCATATTCACCAGCGTGATCCACCCGAATTATTCGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGPTEHGHLPCIDAV*SIFTSVIHPNYSIH Trigger: GTGGATCGAATAATTCGGGTGGATCACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGTCGGACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS CCA 90 bp | ATAAGACCCCTCTTCCCTGTCTGTTGGCAGCATTGTGGAGAGAGATaGAAGCCAGCCAGAACAGTTCTTCAGTGGCAGTCCTCGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IRPLFPVCWQHCGER*KPARTVLQWQSSVP Trigger: AGGGACCGAGGACTGCCACTGAAGAACTGTTCTGGCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAGGGGTCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS TCA 90 bp | TCCACGGCTGCCCGGTTAATATTGTCTAAGGTCATCCCCGAACTGTaGCACCTGATGATGAGGCCTCTTCCATACTCTGAGAAGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STAARLILSKVIPEL*HLMMRPLPYSEKGL Trigger: GAGGCCCTTCTCAGAGTATGGAAGAGGCCTCATCATCAGGTGTCACAGTTCGGGGATGACCTTAGACAATATTAACCGGGCAGCCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS-3UTR CAA 90 bp | GAGTTCCCACTGACATTGTCGGGTGATGTCATGGTGAGAATCCTGACAGCCATTACCGAGCACGGCCATTaGCCCTGCATAGATGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EFPLTLSGDVMVRILTAITEHGH*PCIDAV Trigger: AACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGT...AATGGCTGTCAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | ATGGTGAGAATCCTGACAGCCATTACATTTCTGGCCCGAAGTCCAACAGAGCCACTCACGATGTGGGGCTaGTTCATCCCTCCCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MVRILTAITFLARSPTEPLTMWG*FIPPMQ Trigger: CTGCATGGGAGGGATGAACAAGCCCCACATCGTGAG...TGGCTCTGTTGGACTTCGGGCCAGAAATGTAATGGCTGTCAGGATTCTCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS CCA 90 bp | CATGCCAGATATAAGACCCCTCTTCCCTGTCTGTTGGCAGCATTGTaGAGAGAGATGGAAGCCAGCCAGAACAGTTCTTCAGTGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HARYKTPLPCLLAAL*REMEASQNSSSVAV Trigger: GACTGCCACTGAAGAACTGTTCTGGCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAGGGGTCTTATATCTGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | ATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGTCATGGTGAGAATCCTGTCATCACCCTGCACATaGCTGTTTCCCAGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IDTEFPLTLSGDVMVRILSSPCT*LFPRFS Trigger: GGAGAACCTGGGAAACAGCAATGTGCAGGGTGATGA...CAGGATTCTCACCATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | CTGACAGCCATTACATTTCTGGCCCGAAGTCCAACAGAGCCAAAGAAACTCAGACCTCTTCCCTGTCTGTaGGCAGCATTGTGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTAITFLARSPTEPKKLRPLPCL*AALWRE Trigger: CTCTCTCCACAATGCTGCCAACAGACAGGGAAGAGG...TCTGAGTTTCTTTGGCTCTGTTGGACTTCGGGCCAGAAATGTAATGGCTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | ATCCTGACAGCCATTACATTTCTGGCCCGAAGTCCAACAGAGCCAAAGAAACTCCTGCATAGATGCGGTTaGCTCCATATTCACCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ILTAITFLARSPTEPKKLLHRCG*LHIHQR Trigger: ACGCTGGTGAATATGGAGCAAACCGCATCTATGCAG...GAGTTTCTTTGGCTCTGTTGGACTTCGGGCCAGAAATGTAATGGCTGTCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | ATTAACAAAACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACACCGAGCACGGCCATTaGCCCTGCATAGATGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: INKTHTVITVQLLLHKYHTEHGH*PCIDAV Trigger: AACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGT...GTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTTTTGTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS GCA 90 bp | TGCCACGTTCCACAAGGGCATCAAAACCGTAGGTCGGACCCTGAATaGAATCATCAACTCGTTGAACTTTTTCAAATGGTTCTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CHVPQGHQNRRSDPE*NHQLVELFQMVLLL Trigger: CAAGAGAAGAACCATTTGAAAAAGTTCAACGAGTTGATGATTGCATTCAGGGTCCGACCTACGGTTTTGATGCCCTTGTGGAACGTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS-3UTR CAA 90 bp | CAAAACACACACAGTGATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTCTGCATAGATGCGGTTaGCTCCATATTCACCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QNTHSDNCTAPPPQISLLLHRCG*LHIHQR Trigger: ACGCTGGTGAATATGGAGCAAACCGCATCTATGCAG...AAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTATCACTGTGTGTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS-3UTR CAA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGACTGCATAGATGCGGTTaGCTCCATATTCACCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TYSKTFLINIWLHCIRPGLHRCG*LHIHQR Trigger: ACGCTGGTGAATATGGAGCAAACCGCATCTATGCAG...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR CAA 90 bp | TTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGTCATGGTCTTCATCTCTACTTaGCAGGTGGGAACACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNHFIDTEFPLTLSGDVMVFIST*QVGTLR Trigger: CCTCAGTGTTCCCACCTGCAAAGTAGAGATGAAGAC...CATGACATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | TCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGATCATTGTGCACAAAGTTaGCAAAGCGAGCATGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STLNHFIDTEFPLTLSGDHCAQS*QSEHAR Trigger: TCTGGCATGCTCGCTTTGCAAACTTTGTGCACAATG...ATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | TCGACTTTGAATCATTTTATAGACACCGAGTTCCCACTGACATTGTCGGGTGATGCAATCATCAACTCGTaGAACTTTTTCAAATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STLNHFIDTEFPLTLSGDAIINS*NFFKWF Trigger: GAACCATTTGAAAAAGTTCAACGAGTTGATGATTGC...ATCACCCGACAATGTCAGTGGGAACTCGGTGTCTATAAAATGATTCAAAGTCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS-3UTR CAA 90 bp | ACATACTCTAAAACCTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTGGAGCAATCATCAACTCGTaGAACTTTTTCAAATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TYSKTFLINIWLHCIRPGAIINS*NFFKWF Trigger: GAACCATTTGAAAAAGTTCAACGAGTTGATGATTGC...TCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAGGTTTTAGAGTATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS-3UTR CAA 90 bp | ATAACTGTACAGCTCCTCCTCCACAAATATCACTCCTTAAGTTACGACCATCTTGCAATCATCAACTCGTaGAACTTTTTCAAATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITVQLLLHKYHSLSYDHLAIINS*NFFKWF Trigger: GAACCATTTGAAAAAGTTCAACGAGTTGATGATTGC...AAGATGGTCGTAACTTAAGGAGTGATATTTGTGGAGGAGGAGCTGTACAGTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS GCA 72 bp | CTCTTCCATACTCTGAGAAGGGCCTCCGGACACCAGTaGGCAGGCGTCCCACGGAAGCAGCCGCTATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LFHTLRRASGHQ*AGVPRKQPLWL Trigger: GAGCCATAGCGGCTGCTTCCGTGGGACGCCTGCGCACTGGTGTCCGGAGGCCCTTCTCAGAGTATGGAAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS GCA 72 bp | GGCCATTGCTCCTTCCTTCCCCAGCAAGGCAGTTCCTaGCCCCAGGGCAAAGCCTGCCACGTTCCACAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHCSFLPQQGSS*PQGKACHVPQG Trigger: CCCTTGTGGAACGTGGCAGGCTTTGCCCTGGGGGCAGGAACTGCCTTGCTGGGGAAGGAAGGAGCAATGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS CCA 72 bp | AACATGCACGGCGGCACCCTGAGCAGCTCTGCGTCATaGTCCAGGCCTGTATCGTGGTGTTCAAGCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NMHGGTLSSSAS*SRPVSWCSSSS Trigger: TGAGGAGCTTGAACACCACGATACAGGCCTGGACCATGACGCAGAGCTGCTCAGGGTGCCGCCGTGCATGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS GCA 72 bp | TGGTCCGACCGAGCACGGCCATTTGCCCTGCATAGATaGGGTTTGCTCCATATTCACCAGCGTGATCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: WSDRARPFALHR*GLLHIHQRDPP Trigger: GGGTGGATCACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGTCGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS GCA 72 bp | GCCAACACTGGTCCGACCGAGCACGGCCATTTGCCCTaGATAGATGCGGTTTGCTCCATATTCACCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: ANTGPTEHGHLP*IDAVCSIFTSV Trigger: CACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGTCGGACCAGTGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS CAA 72 bp | GACAGGGCCAACACTGGTCCGACCGAGCACGGCCATTaGCCCTGCATAGATGCGGTTTGCTCCATATTCACC | + |
|
Preference number: 6 (lower is better) Translates to: DRANTGPTEHGH*PCIDAVCSIFT Trigger: GGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGTCGGACCAGTGTTGGCCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS CCA 72 bp | GGAGCCAGCTCTGCGTCATGGTCCAGGCCTGTATCGTaGTGTTCAAGCTCCTCATCGCGAAACTGCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GASSASWSRPVS*CSSSSSRNCLM Trigger: CATCAAGCAGTTTCGCGATGAGGAGCTTGAACACCACGATACAGGCCTGGACCATGACGCAGAGCTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS CCA 72 bp | TTCAACAAGGCATACGCGGGAGCCAGCTCTGCGTCATaGTCCAGGCCTGTATCGTGGTGTTCAAGCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FNKAYAGASSAS*SRPVSWCSSSS Trigger: TGAGGAGCTTGAACACCACGATACAGGCCTGGACCATGACGCAGAGCTGGCTCCCGCGTATGCCTTGTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS CCA 72 bp | AAGGGCAGCTCTGCGTCATGGTCCAGGCCTGTATCGTaGTGTTCAAGCTCCTCATCGCGAAACTGCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: KGSSASWSRPVS*CSSSSSRNCLM Trigger: CATCAAGCAGTTTCGCGATGAGGAGCTTGAACACCACGATACAGGCCTGGACCATGACGCAGAGCTGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS CCA 72 bp | GGAACACTGAGGCCCAGGCAGGCTATGTTCACTGCCTaGGATCCTATAGCCTGCAGTGGTAAAGCTGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: GTLRPRQAMFTA*DPIACSGKAGI Trigger: AATCCCAGCTTTACCACTGCAGGCTATAGGATCCCAGGCAGTGAACATAGCCTGCCTGGGCCTCAGTGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS CAA 90 bp | TTTCTGAATGACAGGGCCAACACTGGTCCGACCGAGCACGGCCATTaGCCCTGCATAGATGCGGTTTGCTCCATATTCACCAGCGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: FLNDRANTGPTEHGH*PCIDAVCSIFTSVI Trigger: GATCACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGTCGGACCAGTGTTGGCCCTGTCATTCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS CAA 90 bp | TCCAGGCCTGTATCGTGGTGTTCAAGCTCCTCATCGCGAAACTGCTaGATGACCTGCAGCAGCTCCTCATACTTCTCAGGGTCCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRPVSWCSSSSSRNC*MTCSSSSYFSGSSS Trigger: GGAAGAGGACCCTGAGAAGTATGAGGAGCTGCTGCAGGTCATCAAGCAGTTTCGCGATGAGGAGCTTGAACACCACGATACAGGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS TCA 72 bp | TGGGATCCTATAGCCTGCAGTGGTAAAGCTGGGATTTaGACCCACGCCTCCCTCATCACCCTGCACATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WDPIACSGKAGI*THASLITLHIA Trigger: AGCAATGTGCAGGGTGATGAGGGAGGCGTGGGTTCAAATCCCAGCTTTACCACTGCAGGCTATAGGATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS TCA 72 bp | CTTCTGTCTTCATCTCTACTTTGCAGGTGGGAACACTaGGGCCCAGGCAGGCTATGTTCACTGCCTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LLSSSLLCRWEH*GPGRLCSLPGI Trigger: GATCCCAGGCAGTGAACATAGCCTGCCTGGGCCTCAGTGTTCCCACCTGCAAAGTAGAGATGAAGACAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
||
| CDS CCA 72 bp | CTCTTCCCTGTCTGTTGGCAGCATTGTGGAGAGAGATaGAAGCCAGCCAGAACAGTTCTTCAGTGGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFPVCWQHCGER*KPARTVLQWQS Trigger: GGACTGCCACTGAAGAACTGTTCTGGCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
||
| CDS CAA 72 bp | GAGCATGCCAGATATAAGACCCCTCTTCCCTGTCTGTaGGCAGCATTGTGGAGAGAGATGGAAGCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EHARYKTPLPCL*AALWREMEASQ Trigger: CTGGCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAGGGGTCTTATATCTGGCATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
||
| CDS GCA 72 bp | ACCGAGCACGGCCATTTGCCCTGCATAGATGCGGTTTaGTCCATATTCACCAGCGTGATCCACCCGAATTAT | + |
|
Preference number: 6 (lower is better) Translates to: TEHGHLPCIDAV*SIFTSVIHPNY Trigger: ATAATTCGGGTGGATCACGCTGGTGAATATGGAGCAAACCGCATCTATGCAGGGCAAATGGCCGTGCTCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
||
| CDS GCA 72 bp | TGTTCAAGCTCCTCATCGCGAAACTGCTTGATGACCTaGAGCAGCTCCTCATACTTCTCAGGGTCCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSSSSSRNCLMT*SSSSYFSGSSS Trigger: GGAAGAGGACCCTGAGAAGTATGAGGAGCTGCTGCAGGTCATCAAGCAGTTTCGCGATGAGGAGCTTGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS TCA 72 bp | TCAAATGGTTCTTCTCTTGATCCCACATTTTCTGAATaGCAGGGCCAACACTGGTCCGACCGAGCACGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SNGSSLDPTFSE*QGQHWSDRARP Trigger: TGGCCGTGCTCGGTCGGACCAGTGTTGGCCCTGTCATTCAGAAAATGTGGGATCAAGAGAAGAACCATTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS GCA 72 bp | GGTCCCTCACGATGTGGGGCTTGTTCATCCCTCCCATaGAGAACAATCTTCAAAGCAGCTTCTGTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: GPSRCGACSSLP*RTIFKAASVFI Trigger: GATGAAGACAGAAGCTGCTTTGAAGATTGTTCTGCATGGGAGGGATGAACAAGCCCCACATCGTGAGGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS GCA 72 bp | CAAGGCATACGCGGGAGCCTGCGGAGAACAAAAGGCTaGGATGTACTAGATGGTAGAGTATGGTCTAACATG | + |
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Preference number: 6 (lower is better) Translates to: QGIRGSLRRTKG*DVLDGRVWSNM Trigger: CATGTTAGACCATACTCTACCATCTAGTACATCGCAGCCTTTTGTTCTCCGCAGGCTCCCGCGTATGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209146.2 |
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| CDS TCA 72 bp | GCCCGGTTAATATTGTCTAAGGTCATCCCCGAACTGTaGCACCTGATGATGAGGCCTCTTCCATACTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ARLILSKVIPEL*HLMMRPLPYSE Trigger: CTCAGAGTATGGAAGAGGCCTCATCATCAGGTGTCACAGTTCGGGGATGACCTTAGACAATATTAACCGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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| CDS TCA 72 bp | GTGAAGACATATAGCTTGGAATGTGTTTCCAGCTGTTaGGGCACTGAAAGGGCAGCTCTGCGTCATGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VKTYSLECVSSC*GTERAALRHGP Trigger: TGGACCATGACGCAGAGCTGCCCTTTCAGTGCCTCAACAGCTGGAAACACATTCCAAGCTATATGTCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS CCA 72 bp | CTTTCTGATAAATATATGGCTGCACTGCATCCGGCCTaGATAATCCTCTTCAACAAGGCATACGCGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSDKYMAALHPA*IILFNKAYAGA Trigger: GGCTCCCGCGTATGCCTTGTTGAAGAGGATTATCCAGGCCGGATGCAGTGCAGCCATATATTTATCAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032887.4 |
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| CDS CCA 72 bp | TATAAGACCCCTCTTCCCTGTCTGTTGGCAGCATTGTaGAGAGAGATGGAAGCCAGCCAGAACAGTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: YKTPLPCLLAAL*REMEASQNSSS Trigger: TGAAGAACTGTTCTGGCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAGGGGTCTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS CAA 72 bp | GGATTTGAACCCACGCCTCCCTCATCACCCTGCACATaGCTGTTTCCCAGGTTCTCCACTTTGTGTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GFEPTPPSSPCT*LFPRFSTLCFD Trigger: ATCAAAACACAAAGTGGAGAACCTGGGAAACAGCAATGTGCAGGGTGATGAGGGAGGCGTGGGTTCAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS CAA 72 bp | AGATATAAGACCCCTCTTCCCTGTCTGTTGGCAGCATaGTGGAGAGAGATGGAAGCCAGCCAGAACAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RYKTPLPCLLAA*WREMEASQNSS Trigger: AGAACTGTTCTGGCTGGCTTCCATCTCTCTCCACAATGCTGCCAACAGACAGGGAAGAGGGGTCTTATATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098090.10 |
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| CDS GCA 72 bp | CCACAAGGGCATCAAAACCGTAGGTCGGACCCTGAATaGAATCATCAACTCGTTGAACTTTTTCAAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: PQGHQNRRSDPE*NHQLVELFQMV Trigger: AACCATTTGAAAAAGTTCAACGAGTTGATGATTGCATTCAGGGTCCGACCTACGGTTTTGATGCCCTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032887.4 ENSMUST00000098090.10 ENSMUST00000209146.2 |
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