Pregenerated sensors for COQ6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021235Ensembl transcript IDs: ENSMUST00000021661.13, ENSMUST00000110276.8, ENSMUST00000110278.8, ENSMUST00000145522.2, ENSMUST00000152913.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAATATCCCCGAAGCCCATGTTGACACCTTGTCCCGCGAGTGGATaGATTCTGTGGGCTGCATCACCAATGAGGGCCACCCGAGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: EISPKPMLTPCPASG*ILWAASPMRATRGR Trigger: CCGGCCTCGGGTGGCCCTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGGATATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CCA 90 bp | GCTGGAAATATCCCCGAAGCCCATGTTGACACCTTGTCCCGCGAGTaGATGGATTCTGTGGGCTGCATCACCAATGAGGGCCACCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: AGNIPEAHVDTLSRE*MDSVGCITNEGHPR Trigger: CCTCGGGTGGCCCTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGGATATTTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR TCA 90 bp | GCTTTTAGCATCCACCTTGGCTATACTTGGGGGCAGCTGACGGGCTaGGACCTTAGTGGGCTTCAGAAGGGCGACAGCATGGCGCACCAT | + |
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Preference number: 1 (lower is better) Translates to: AFSIHLGYTWGQLTG*DLSGLQKGDSMAHH Trigger: ATGGTGCGCCATGCTGTCGCCCTTCTGAAGCCCACTAAGGTCTCAGCCCGTCAGCTGCCCCCAAGTATAGCCAAGGTGGATGCTAAAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR TCA 90 bp | AGGGCTCTGCTTTTAGCATCCACCTTGGCTATACTTGGGGGCAGCTaGCGGGCTGAGACCTTAGTGGGCTTCAGAAGGGCGACAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: RALLLASTLAILGGS*RAETLVGFRRATAW Trigger: CCATGCTGTCGCCCTTCTGAAGCCCACTAAGGTCTCAGCCCGTCAGCTGCCCCCAAGTATAGCCAAGGTGGATGCTAAAAGCAGAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR GCA 90 bp | AAGGCCATAATCTGTTCTTTGAGAGGAGACACTGCGTTCGTGGCCTaGAAGCCCCAGGTCCTGAGCAGCACGAGGGGAGTGGCACTGGTA | + |
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Preference number: 1 (lower is better) Translates to: KAIICSLRGDTAFVA*KPQVLSSTRGVALV Trigger: TACCAGTGCCACTCCCCTCGTGCTGCTCAGGACCTGGGGCTTGCAGGCCACGAACGCAGTGTCTCCTCTCAAAGAACAGATTATGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR TCA 90 bp | GCATGGCGCACCATGGCGCTGGCAGAGTCGACGAAGTCTGTGTGGTaGACATCACTCCAAAAGGCAGAGTTGATGGCATCCACGAATTCT | + |
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Preference number: 1 (lower is better) Translates to: AWRTMALAESTKSVW*TSLQKAELMASTNS Trigger: AGAATTCGTGGATGCCATCAACTCTGCCTTTTGGAGTGATGTTCACCACACAGACTTCGTCGACTCTGCCAGCGCCATGGTGCGCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCATAATCTGTTCTTTGAGAGGAGACACTGCGTTCGTGGCCTGCAAGCCCGGGCAGCTGACGGGCTaGGACCTTAGTGGGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: KAIICSLRGDTAFVACKPGQLTG*DLSGLQ Trigger: CTGAAGCCCACTAAGGTCTCAGCCCGTCAGCTGCCC...GGGCTTGCAGGCCACGAACGCAGTGTCTCCTCTCAAAGAACAGATTATGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR TCA 90 bp | CCCGCGAGTGGATGGATTCTGTGGGCTGCATCACCAATGAGGGCCACCCGAGGCTCCAAAAGGCAGAGTTaGTGGCATCCACGAATTCTT | + |
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Preference number: 2 (lower is better) Translates to: PASGWILWAASPMRATRGSKRQS*WHPRIL Trigger: AAGAATTCGTGGATGCCATCAACTCTGCCTTTTGGA...GCCTCGGGTGGCCCTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCAGTAGCAGCCAGGAGAGCAGTGTTATGACGCTGTCTGTCTGTCTCATACCCCGAAGCCCATGTTaGCACCTTGTCCCGCGAGTG | + |
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Preference number: 2 (lower is better) Translates to: QVSSSQESSVMTLSVCLIPRSPC*HLVPRV Trigger: CACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGG...TATGAGACAGACAGACAGCGTCATAACACTGCTCTCCTGGCTGCTACTGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGCTGGAAATATCCCCGAAGCCCATGTTGACACCTTGTCCCGCGAGTGGAACCAGCTCTGCTGCATaGTCGTGTGATGTGGACCAG | + |
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Preference number: 2 (lower is better) Translates to: TKLEISPKPMLTPCPASGTSSAA*SCDVDQ Trigger: CTGGTCCACATCACACGAGCATGCAGCAGAGCTGGT...TCCACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGGATATTTCCAGCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGAGTGGCACTGGTAGAGTAGAGCCTTTTCAACAGGTCAGTAGCAGCCAGCTGTCTCATAACCTGTaGGGTGGCTCATGGAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: EGSGTGRVEPFQQVSSSQLSHNL*GGSWSL Trigger: TAGGCTCCATGAGCCACCTCACAGGTTATGAGACAG...CTGGCTGCTACTGACCTGTTGAAAAGGCTCTACTCTACCAGTGCCACTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR GCA 90 bp | GATAAGTGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTGGATCCCAGCAGCTTaGCTCACTCCTGACTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: DKWRVATTADWSYFQLTFWIPAA*LTPDLC Trigger: GCACAAGTCAGGAGTGAGGCAAGCTGCTGGGATCCA...GAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAACAGGTCAGTAGCAGCCAGGAGAGCAGTGTTATGACGCTGTCTGTCTGTATACTTGGGGGCAGCTaGCGGGCTGAGACCTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: FQQVSSSQESSVMTLSVCILGGS*RAETLV Trigger: CACTAAGGTCTCAGCCCGTCAGCTGCCCCCAAGTAT...ACAGACAGACAGCGTCATAACACTGCTCTCCTGGCTGCTACTGACCTGTTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCAACAGGTCAGTAGCAGCCAGGAGAGCAGTGTTATGACGCTGTCTGTCTGTTGCTGCATGCTCGTGTaGTGTGGACCAGACCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FQQVSSSQESSVMTLSVCCCMLV*CGPDQG Trigger: TCCTTGGTCTGGTCCACATCACACGAGCATGCAGCA...ACAGACAGACAGCGTCATAACACTGCTCTCCTGGCTGCTACTGACCTGTTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CAA 90 bp | CTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACTCATTaGCTCGCAAAGGCCATAATCTGTTCTTTGAGAGGAGACACTGCG | + |
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Preference number: 2 (lower is better) Translates to: LGVLCHHGLQKRSTH*LAKAIICSLRGDTA Trigger: CGCAGTGTCTCCTCTCAAAGAACAGATTATGGCCTTTGCGAGCAAATGAGTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CAA 90 bp | AAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTaGTCATCACGGTCTCCAGAAGAGAAGCACTCATTTGCTCGCAAA | + |
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Preference number: 2 (lower is better) Translates to: KFIKPHWEGPRARCS*SSRSPEEKHSFARK Trigger: TTTGCGAGCAAATGAGTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR GCA 72 bp | GACACCTTGTCCCGCGAGTGGATGGATTCTGTGGGCTaGATCACCAATGAGGGCCACCCGAGGCCGGACGTA | + |
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Preference number: 3 (lower is better) Translates to: DTLSREWMDSVG*ITNEGHPRPDV Trigger: TACGTCCGGCCTCGGGTGGCCCTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CCA 72 bp | GCTGAGACCTTAGTGGGCTTCAGAAGGGCGACAGCATaGCGCACCATGGCGCTGGCAGAGTCGACGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: AETLVGFRRATA*RTMALAESTKS Trigger: AGACTTCGTCGACTCTGCCAGCGCCATGGTGCGCCATGCTGTCGCCCTTCTGAAGCCCACTAAGGTCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CCA 72 bp | ATGTTGACACCTTGTCCCGCGAGTGGATGGATTCTGTaGGCTGCATCACCAATGAGGGCCACCCGAGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: MLTPCPASGWIL*AASPMRATRGR Trigger: CCGGCCTCGGGTGGCCCTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR GCA 72 bp | ATCTGTTCTTTGAGAGGAGACACTGCGTTCGTGGCCTaGAAGCCCCAGGTCCTGAGCAGCACGAGGGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: ICSLRGDTAFVA*KPQVLSSTRGV Trigger: CACTCCCCTCGTGCTGCTCAGGACCTGGGGCTTGCAGGCCACGAACGCAGTGTCTCCTCTCAAAGAACAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CCA 72 bp | GCTTCAGAAGGGCGACAGCATGGCGCACCATGGCGCTaGCAGAGTCGACGAAGTCTGTGTGGTGAACATCAC | + |
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Preference number: 3 (lower is better) Translates to: ASEGRQHGAPWR*QSRRSLCGEHH Trigger: GTGATGTTCACCACACAGACTTCGTCGACTCTGCCAGCGCCATGGTGCGCCATGCTGTCGCCCTTCTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CCA 72 bp | CCGAAGCCCATGTTGACACCTTGTCCCGCGAGTGGATaGATTCTGTGGGCTGCATCACCAATGAGGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: PKPMLTPCPASG*ILWAASPMRAT Trigger: GGTGGCCCTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAACATGGGCTTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR CCA 72 bp | ATCCCCGAAGCCCATGTTGACACCTTGTCCCGCGAGTaGATGGATTCTGTGGGCTGCATCACCAATGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: IPEAHVDTLSRE*MDSVGCITNEG Trigger: GCCCTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR TCA 72 bp | CTTTTAGCATCCACCTTGGCTATACTTGGGGGCAGCTaGCGGGCTGAGACCTTAGTGGGCTTCAGAAGGGCG | + |
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Preference number: 3 (lower is better) Translates to: LLASTLAILGGS*RAETLVGFRRA Trigger: CGCCCTTCTGAAGCCCACTAAGGTCTCAGCCCGTCAGCTGCCCCCAAGTATAGCCAAGGTGGATGCTAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGACACCTTGTCCCGCGAGTGGATGGATTCTGTGGGCTGCATCACCAATGAGCTTTTAGCATCCACCTaGGCTATACTTGGGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: VDTLSREWMDSVGCITNELLAST*AILGGS Trigger: GCTGCCCCCAAGTATAGCCAAGGTGGATGCTAAAAG...CTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR TCA 72 bp | GATGAACCAAGCTGGAAATATCCCCGAAGCCCATGTTaGCACCTTGTCCCGCGAGTGGATGGATTCTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: DEPSWKYPRSPC*HLVPRVDGFCG Trigger: CCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGGATATTTCCAGCTTGGTTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACTCATTTGCTCGCAAACTCCAAAAGGCAGAGTaGATGGCATCCACGAATTCT | + |
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Preference number: 3 (lower is better) Translates to: RCSLSSRSPEEKHSFARKLQKAE*MASTNS Trigger: AGAATTCGTGGATGCCATCAACTCTGCCTTTTGGAG...TTTGCGAGCAAATGAGTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| CDS-3UTR CCA 90 bp | GTTGACACCTTGTCCCGCGAGTGGATGGATTCTGTGGGCTGCATCACCAATGAGCTCAGCCTGGTGTGGTaGCACATGCCCGCCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VDTLSREWMDSVGCITNELSLVW*HMPAGS Trigger: GCTCCCGGCGGGCATGTGCCACCACACCAGGCTGAG...CTCATTGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCGAGACACTGCGTTCGTaGCCTGCAAGCCCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GKAPGLGVLCHHGLQKRSETLRS*PASPRS Trigger: GGACCTGGGGCTTGCAGGCCACGAACGCAGTGTCTC...GCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR TCA 90 bp | GAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACGGGCAGCTGACGGGCTaGGACCTTAGTGGGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: EGPRARCSLSSRSPEEKHGQLTG*DLSGLQ Trigger: CTGAAGCCCACTAAGGTCTCAGCCCGTCAGCTGCCC...GTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR GCA 90 bp | CATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGACTGCGTTCGTGGCCTaGAAGCCCCAGGTCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HWEGPRARCSLSSRSPEETAFVA*KPQVLS Trigger: GCTCAGGACCTGGGGCTTGCAGGCCACGAACGCAGT...CTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CCA 90 bp | AACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGGAGACACTGCGTTCGTaGCCTGCAAGCCCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: NHIGKAPGLGVLCHHGLQETLRS*PASPRS Trigger: GGACCTGGGGCTTGCAGGCCACGAACGCAGTGTCTC...CTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR TCA 90 bp | ATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGACCCCGAAGCCCATGTTaGCACCTTGTCCCGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: IGKAPGLGVLCHHGLQKRPRSPC*HLVPRV Trigger: CACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGG...TCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CCA 90 bp | GGTAGAGTAGAGCCTTTTCAACAGGTCAGTAGCAGCCAGGAGAGCAGTGTTATGAGCCTCAGCCTGGTGTaGTGGCACATGCCCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GRVEPFQQVSSSQESSVMSLSLV*WHMPAG Trigger: CCCGGCGGGCATGTGCCACCACACCAGGCTGAGGCT...CATAACACTGCTCTCCTGGCTGCTACTGACCTGTTGAAAAGGCTCTACTCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGCTGGAAATATCCCCGAAGCCCATGTTGACACCTTGTCCCGCGAGTGGAAGAAGAGCCTCAGCCTaGTGTGGTGGCACATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TKLEISPKPMLTPCPASGRRASA*CGGTCP Trigger: CGGGCATGTGCCACCACACCAGGCTGAGGCTCTTCT...TCCACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGGATATTTCCAGCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| CDS-3UTR TCA 90 bp | TTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCCCCGAAGCCCATGTTaGCACCTTGTCCCGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: LNHIGKAPGLGVLCHHGLPRSPC*HLVPRV Trigger: CACTCGCGGGACAAGGTGTCAACATGGGCTTCGGGG...GAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTGGATCCCACTAAGGCACAAGCCATaGCAGAGCCCACTAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RVATTADWSYFQLTFWIPLRHKP*QSPLGL Trigger: GAGGCCTAGTGGGCTCTGCCATGGCTTGTGCCTTAG...TGGGATCCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTGGATCCCAGGCTGGAGTCTGCCATaGAAAATGCACCAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RVATTADWSYFQLTFWIPGWSLP*KMHQAR Trigger: CCTGGCCTGGTGCATTTTCCATGGCAGACTCCAGCC...TGGGATCCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
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| CDS-3UTR CCA 90 bp | ACCAGCTCTGCTGCATGCTCGTGTGATGTGGACCAGACCAAGGAGCTCAAGGTAGGCTGGAGTCTGCCATaGAAAATGCACCAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TSSAACSCDVDQTKELKVGWSLP*KMHQAR Trigger: CCTGGCCTGGTGCATTTTCCATGGCAGACTCCAGCC...TACCTTGAGCTCCTTGGTCTGGTCCACATCACACGAGCATGCAGCAGAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
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| CDS-3UTR CCA 90 bp | CATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGACCTTGTCCCGCGAGTaGATGGATTCTGTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HWEGPRARCSLSSRSPEETLSRE*MDSVGC Trigger: GCAGCCCACAGAATCCATCCACTCGCGGGACAAGGT...CTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR TCA 90 bp | CCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAACATTATCAAGGCCTCTaGGCAGGAGTCCCACACCTG | + |
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Preference number: 4 (lower is better) Translates to: PHWEGPRARCSLSSRSPEHYQGL*AGVPHL Trigger: CAGGTGTGGGACTCCTGCTCAGAGGCCTTGATAATG...TTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
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| CDS-3UTR TCA 90 bp | AAGTGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTGGCATTATCAAGGCCTCTaGGCAGGAGTCCCACACCTG | + |
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Preference number: 4 (lower is better) Translates to: KWRVATTADWSYFQLTFWHYQGL*AGVPHL Trigger: CAGGTGTGGGACTCCTGCTCAGAGGCCTTGATAATG...CCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
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| CDS-3UTR GCA 90 bp | TGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTGGATCCCAAGGGCTGGAGTCTaGCATGGAAAATGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: WRVATTADWSYFQLTFWIPRAGV*HGKCTR Trigger: CCTGGTGCATTTTCCATGGCAGACTCCAGCCCTTGG...GATCCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
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| CDS-3UTR GCA 90 bp | CCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAACCAAGGGCTGGAGTCTaGCATGGAAAATGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PHWEGPRARCSLSSRSPEPRAGV*HGKCTR Trigger: CCTGGTGCATTTTCCATGGCAGACTCCAGCCCTTGG...TTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
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| CDS-3UTR GCA 90 bp | CACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGTGGATCCCAGCAGCTTaGCTCACTCCTGACTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: HIGKAPGLGVLCHHGLQKWIPAA*LTPDLC Trigger: GCACAAGTCAGGAGTGAGGCAAGCTGCTGGGATCCA...CTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
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| CDS-3UTR CCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACTAAGGCACAAGCCATaGCAGAGCCCACTAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPLRHKP*QSPLGL Trigger: GAGGCCTAGTGGGCTCTGCCATGGCTTGTGCCTTAG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGGTGGCCTCTGATAAGTaGAGAGTGGCCACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEGPRARCSLSSRSPEEKVASDK*RVATTA Trigger: TGCTGTGGTGGCCACTCTCCACTTATCAGAGGCCAC...CTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | CACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGTGTCCCGCGAGTGGATaGATTCTGTGGGCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HIGKAPGLGVLCHHGLQKCPASG*ILWAAS Trigger: TGATGCAGCCCACAGAATCCATCCACTCGCGGGACA...CTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAACCTTGTCCCGCGAGTaGATGGATTCTGTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPTLSRE*MDSVGC Trigger: GCAGCCCACAGAATCCATCCACTCGCGGGACAAGGT...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAATGCACCAAAACTGCTaGGCAGGGTTGTGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGKAPGLGVLCHHGLQKRMHQNC*AGLWSQ Trigger: CTGGCTCCACAACCCTGCTCAGCAGTTTTGGTGCAT...TCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACATTATCAAGGCCTCTaGGCAGGAGTCCCACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPHYQGL*AGVPHL Trigger: CAGGTGTGGGACTCCTGCTCAGAGGCCTTGATAATG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | AACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGCTGTCTCATAACCTGTaGGGTGGCTCATGGAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NHIGKAPGLGVLCHHGLQLSHNL*GGSWSL Trigger: TAGGCTCCATGAGCCACCTCACAGGTTATGAGACAG...CTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR GCA 90 bp | CATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGGCAGATGTGGTCCCATaGACCAAAACTGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HWEGPRARCSLSSRSPEEADVVP*TKTAEQ Trigger: CTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGC...CTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGGCAGATGTGGTCCCATaGACCAAAACTGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WEGPRARCSLSSRSPEEKADVVP*TKTAEQ Trigger: CTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGC...CTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR GCA 90 bp | ATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAACCAGCTCTGCTGCATaGTCGTGTGATGTGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGKAPGLGVLCHHGLQKRTSSAA*SCDVDQ Trigger: CTGGTCCACATCACACGAGCATGCAGCAGAGCTGGT...TCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGACTGCGTTCGTGGCCTaGAAGCCCCAGGTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIKPHWEGPRARCSLSSRTAFVA*KPQVLS Trigger: GCTCAGGACCTGGGGCTTGCAGGCCACGAACGCAGT...CCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCGGCTGGAGTCTGCCATaGAAAATGCACCAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNHIGKAPGLGVLCHHGLGWSLP*KMHQAR Trigger: CCTGGCCTGGTGCATTTTCCATGGCAGACTCCAGCC...GAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | CCCATGTTGACACCTTGTCCCGCGAGTGGATGGATTCTGTGGGCTGCATCACCATATGGACCCAAGGGCTaGAGTCTGCCATGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PMLTPCPASGWILWAASPYGPKG*SLPWKM Trigger: CATTTTCCATGGCAGACTCCAGCCCTTGGGTCCATA...TGGTGATGCAGCCCACAGAATCCATCCACTCGCGGGACAAGGTGTCAACATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGTTCCAGCTGACATTCTaGATCCCAGCAGCTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NHIGKAPGLGVLCHHGLQFQLTF*IPAACL Trigger: GAGGCAAGCTGCTGGGATCCAGAATGTCAGCTGGAA...CTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACCTGATAAGTGGAGAGTaGCCACCACAGCAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGPRARCSLSSRSPEEKHLISGE*PPQQTG Trigger: ACCAGTCTGCTGTGGTGGCCACTCTCCACTTATCAG...GTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCATGTCCCGCGAGTGGATaGATTCTGTGGGCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPCPASG*ILWAAS Trigger: TGATGCAGCCCACAGAATCCATCCACTCGCGGGACA...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCAGGGGATATGGAGCTaGCTCTGTTGCTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WEGPRARCSLSSRSPEEKQGIWS*LCCCKS Trigger: AGACTTACAGCAACAGAGTCAGCTCCATATCCCCTG...CTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACTGTCTCATAACCTGTaGGGTGGCTCATGGAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPLSHNL*GGSWSL Trigger: TAGGCTCCATGAGCCACCTCACAGGTTATGAGACAG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACAGGAGAGCAGTGTTATaGCGCTGTCTGTCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGPRARCSLSSRSPEEKHRRAVL*RCLSVS Trigger: TGAGACAGACAGACAGCGTCATAACACTGCTCTCCT...GTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR TCA 90 bp | CCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAAGGAGAGCAGTGTTATaGCGCTGTCTGTCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHWEGPRARCSLSSRSPERRAVL*RCLSVS Trigger: TGAGACAGACAGACAGCGTCATAACACTGCTCTCCT...TTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR GCA 90 bp | GATAAGTGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCGCAGATGTGGTCCCATaGACCAAAACTGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKWRVATTADWSYFQLTFADVVP*TKTAEQ Trigger: CTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGC...GAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
||
| CDS-3UTR GCA 90 bp | TTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCACCAGCTCTGCTGCATaGTCGTGTGATGTGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNHIGKAPGLGVLCHHGLTSSAA*SCDVDQ Trigger: CTGGTCCACATCACACGAGCATGCAGCAGAGCTGGT...GAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTGGCTGGAGTCTGCCATaGAAAATGCACCAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKPHWEGPRARCSLSSRSGWSLP*KMHQAR Trigger: CCTGGCCTGGTGCATTTTCCATGGCAGACTCCAGCC...AGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | CCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAATATGGACCCAAGGGCTaGAGTCTGCCATGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PHWEGPRARCSLSSRSPEYGPKG*SLPWKM Trigger: CATTTTCCATGGCAGACTCCAGCCCTTGGGTCCATA...TTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | TGGCGCTGGCAGAGTCGACGAAGTCTGTGTGGTGAACATCACTCCAAAAGGCAGTCACCTAGGGTAATATaGACCCAAGGGCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WRWQSRRSLCGEHHSKRQSPRVI*TQGLES Trigger: AGACTCCAGCCCTTGGGTCCATATTACCCTAGGTGA...CTGCCTTTTGGAGTGATGTTCACCACACAGACTTCGTCGACTCTGCCAGCGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACTGATAAGTGGAGAGTaGCCACCACAGCAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPLISGE*PPQQTG Trigger: ACCAGTCTGCTGTGGTGGCCACTCTCCACTTATCAG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGGTCAGTAGCAGCCAGGAGAGCAGTGTTATGACGCTGTCTGTCTGTCTCCTGATAAGTGGAGAGTaGCCACCACAGCAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQVSSSQESSVMTLSVCLLISGE*PPQQTG Trigger: ACCAGTCTGCTGTGGTGGCCACTCTCCACTTATCAG...GAGACAGACAGACAGCGTCATAACACTGCTCTCCTGGCTGCTACTGACCTGTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACAGGGGATATGGAGCTaGCTCTGTTGCTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPQGIWS*LCCCKS Trigger: AGACTTACAGCAACAGAGTCAGCTCCATATCCCCTG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | GATAAGTGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCCAGGGGATATGGAGCTaGCTCTGTTGCTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKWRVATTADWSYFQLTFQGIWS*LCCCKS Trigger: AGACTTACAGCAACAGAGTCAGCTCCATATCCCCTG...GAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
||
| CDS-3UTR CCA 90 bp | TTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGGGCTTTCTTTaGACCCGCCTCCAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNHIGKAPGLGVLCHHGLQGFL*TRLQQQ Trigger: CTGTTGCTGGAGGCGGGTCCAAAGAAAGCCCTGGAG...ACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTGGCGCATATTGCAGATGTaGTCCCATGCACCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KWRVATTADWSYFQLTFWRILQM*SHAPKL Trigger: CAGTTTTGGTGCATGGGACCACATCTGCAATATGCG...CCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACCGCATATTGCAGATGTaGTCCCATGCACCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EGPRARCSLSSRSPEEKHRILQM*SHAPKL Trigger: CAGTTTTGGTGCATGGGACCACATCTGCAATATGCG...GTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATAAGTGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATATGGACCCAAGGGCTaGAGTCTGCCATGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SDKWRVATTADWSYFQLTYGPKG*SLPWKM Trigger: CATTTTCCATGGCAGACTCCAGCCCTTGGGTCCATA...TGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTTATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACATCAACAGTTTGGTCTaGAGGGTACTGCCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EGPRARCSLSSRSPEEKHINSLV*RVLPSP Trigger: AGGTGATGGCAGTACCCTCCAGACCAAACTGTTGAT...GTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTGGATCCCACAATCTAGGGTAATATaGACCCAAGGGCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVATTADWSYFQLTFWIPQSRVI*TQGLES Trigger: AGACTCCAGCCCTTGGGTCCATATTACCCTAGATTG...TGGGATCCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
||
| CDS-3UTR TCA 90 bp | CATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGTCCAAAAGGCAGAGTTaGTGGCATCCACGAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HWEGPRARCSLSSRSPEESKRQS*WHPRIL Trigger: AAGAATTCGTGGATGCCATCAACTCTGCCTTTTGGA...CTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACTCCAAAAGGCAGAGTTaGTGGCATCCACGAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGPRARCSLSSRSPEEKHSKRQS*WHPRIL Trigger: AAGAATTCGTGGATGCCATCAACTCTGCCTTTTGGA...GTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTGGGCAGCTGACGGGCTaGGACCTTAGTGGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVNLLNHIGKAPGLGVLCGQLTG*DLSGLQ Trigger: CTGAAGCCCACTAAGGTCTCAGCCCGTCAGCTGCCC...ACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTGTCTGCCATGGAAAATaGACCAGGCCAGGAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IKPHWEGPRARCSLSSRSVCHGK*TRPGIA Trigger: GGCTATTCCTGGCCTGGTGCATTTTCCATGGCAGAC...AGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR GCA 90 bp | TTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTTGGATCCCAGCAGCTTaGCTCACTCCTGACTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNHIGKAPGLGVLCHHGWIPAA*LTPDLC Trigger: GCACAAGTCAGGAGTGAGGCAAGCTGCTGGGATCCA...ACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACGCATATTGCAGATGTaGTCCCATGCACCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCSLSSRSPRILQM*SHAPKL Trigger: CAGTTTTGGTGCATGGGACCACATCTGCAATATGCG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCTCACCTAGGGTAATATaGACCCAAGGGCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNHIGKAPGLGVLCHHGLSPRVI*TQGLES Trigger: AGACTCCAGCCCTTGGGTCCATATTACCCTAGGTGA...GAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAACAGGTCAGTAGCAGCCAGGAGAGCAGTGTTATGACGCTGTCTGTCTGTTTCCAGCTGACATTCTaGATCCCAGCAGCTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQQVSSSQESSVMTLSVCFQLTF*IPAACL Trigger: GAGGCAAGCTGCTGGGATCCAGAATGTCAGCTGGAA...ACAGACAGACAGCGTCATAACACTGCTCTCCTGGCTGCTACTGACCTGTTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCAGGGGATATGGAGCTaGCTCTGTTGCTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKPHWEGPRARCSLSSRSQGIWS*LCCCKS Trigger: AGACTTACAGCAACAGAGTCAGCTCCATATCCCCTG...AGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR GCA 90 bp | TTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTGCAGATGTGGTCCCATaGACCAAAACTGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNHIGKAPGLGVLCHHGADVVP*TKTAEQ Trigger: CTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGC...ACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACCTAAGGCACAAGCCATaGCAGAGCCCACTAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLLNHIGKAPGLGVLCHHLRHKP*QSPLGL Trigger: GAGGCCTAGTGGGCTCTGCCATGGCTTGTGCCTTAG...GTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | CATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGCTACATTGTTTTCTGTaGCCTCTGATAAGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HWEGPRARCSLSSRSPEELHCFL*PLISGE Trigger: CTCTCCACTTATCAGAGGCCACAGAAAACAATGTAG...CTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACCTACATTGTTTTCTGTaGCCTCTGATAAGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGPRARCSLSSRSPEEKHLHCFL*PLISGE Trigger: CTCTCCACTTATCAGAGGCCACAGAAAACAATGTAG...GTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| 3UTR CAA 72 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTaGTCATCACGGTCTCCAGAAGAGAAGCACTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KPHWEGPRARCS*SSRSPEEKHSF Trigger: AAATGAGTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTAGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTATACTTGGGGGCAGCTaGCGGGCTGAGACCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVNLLNHIGKAPGLGVILGGS*RAETLV Trigger: CACTAAGGTCTCAGCCCGTCAGCTGCCCCCAAGTAT...AACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACTAGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021661.13 |
||
| CDS-3UTR TCA 90 bp | AAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCAATACTTGGGGGCAGCTaGCGGGCTGAGACCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFIKPHWEGPRARCSLSSILGGS*RAETLV Trigger: CACTAAGGTCTCAGCCCGTCAGCTGCCCCCAAGTAT...TGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCTAAGGCACAAGCCATaGCAGAGCCCACTAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVNLLNHIGKAPGLGVLCLRHKP*QSPLGL Trigger: GAGGCCTAGTGGGCTCTGCCATGGCTTGTGCCTTAG...ACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | TTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTTATGGACCCAAGGGCTaGAGTCTGCCATGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLNHIGKAPGLGVLCHHGYGPKG*SLPWKM Trigger: CATTTTCCATGGCAGACTCCAGCCCTTGGGTCCATA...ACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | GTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCATTATCAAGGCCTCTaGGCAGGAGTCCCACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNLLNHIGKAPGLGVLCHHYQGL*AGVPHL Trigger: CAGGTGTGGGACTCCTGCTCAGAGGCCTTGATAATG...ATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR TCA 90 bp | GTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATTGCTGCATGCTCGTGTaGTGTGGACCAGACCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNLLNHIGKAPGLGVLCHCCMLV*CGPDQG Trigger: TCCTTGGTCTGGTCCACATCACACGAGCATGCAGCA...ATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR TCA 90 bp | AAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCATGCTGCATGCTCGTGTaGTGTGGACCAGACCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KFIKPHWEGPRARCSLSSCCMLV*CGPDQG Trigger: TCCTTGGTCTGGTCCACATCACACGAGCATGCAGCA...TGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTAGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCCAAGGGCTGGAGTCTaGCATGGAAAATGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVNLLNHIGKAPGLGVPRAGV*HGKCTR Trigger: CCTGGTGCATTTTCCATGGCAGACTCCAGCCCTTGG...AACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACTAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021661.13 |
||
| CDS-3UTR GCA 90 bp | TGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCACCAAGGGCTGGAGTCTaGCATGGAAAATGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKFIKPHWEGPRARCSLSPRAGV*HGKCTR Trigger: CCTGGTGCATTTTCCATGGCAGACTCCAGCCCTTGG...TGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATTTGAGAGGAGACACTaGGTTCGTGGCCTGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CKFIKPHWEGPRARCSLSFERRH*VRGLQA Trigger: GGCTTGCAGGCCACGAACGCAGTGTCTCCTCTCAAA...TGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTTTGAGAGGAGACACTaGGTTCGTGGCCTGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVNLLNHIGKAPGLGVLFERRH*VRGLQA Trigger: GGCTTGCAGGCCACGAACGCAGTGTCTCCTCTCAAA...AAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGCGCATATTGCAGATGTaGTCCCATGCACCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FIKPHWEGPRARCSLSSRRILQM*SHAPKL Trigger: CAGTTTTGGTGCATGGGACCACATCTGCAATATGCG...CCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTGTGGCCTCTGATAAGTaGAGAGTGGCCACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVNLLNHIGKAPGLGVLVASDK*RVATTA Trigger: TGCTGTGGTGGCCACTCTCCACTTATCAGAGGCCAC...AAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTGTGGCCTCTGATAAGTaGAGAGTGGCCACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVNLLNHIGKAPGLGVLCVASDK*RVATTA Trigger: TGCTGTGGTGGCCACTCTCCACTTATCAGAGGCCAC...ACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCACTCATTTGCTCGCAAAATCAACAGTTTGGTCTaGAGGGTACTGCCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RCSLSSRSPEEKHSFARKINSLV*RVLPSP Trigger: AGGTGATGGCAGTACCCTCCAGACCAAACTGTTGAT...TTTGCGAGCAAATGAGTGCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATTTCCAGCTGACATTCTaGATCCCAGCAGCTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VNLLNHIGKAPGLGVLCHFQLTF*IPAACL Trigger: GAGGCAAGCTGCTGGGATCCAGAATGTCAGCTGGAA...ATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATTCACCTAGGGTAATATaGACCCAAGGGCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNLLNHIGKAPGLGVLCHSPRVI*TQGLES Trigger: AGACTCCAGCCCTTGGGTCCATATTACCCTAGGTGA...ATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| 3UTR CAA 72 bp | CTTTGTCATCACGGTCTCCAGAAGAGAAGCACTCATTaGCTCGCAAAGGCCATAATCTGTTCTTTGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCHHGLQKRSTH*LAKAIICSLRG Trigger: TCCTCTCAAAGAACAGATTATGGCCTTTGCGAGCAAATGAGTGCTTCTCTTCTGGAGACCGTGATGACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTATCAACAGTTTGGTCTaGAGGGTACTGCCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVNLLNHIGKAPGLGVLINSLV*RVLPSP Trigger: AGGTGATGGCAGTACCCTCCAGACCAAACTGTTGAT...AAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCACTTCCCATTGAAGGCTaGTGTACTGAGATGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CKFIKPHWEGPRARCSLSLPIEG*CTEMMN Trigger: GTTCATCATCTCAGTACAGCAGCCTTCAATGGGAAG...TGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCTTCCCATTGAAGGCTaGTGTACTGAGATGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVNLLNHIGKAPGLGVLCLPIEG*CTEMMN Trigger: GTTCATCATCTCAGTACAGCAGCCTTCAATGGGAAG...ACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS-3UTR CCA 90 bp | AATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACCTACATTGTTTTCTGTaGCCTCTGATAAGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLLNHIGKAPGLGVLCHHLHCFL*PLISGE Trigger: CTCTCCACTTATCAGAGGCCACAGAAAACAATGTAG...GTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS CCA 90 bp | CCACGTCGTACACGGTGTCTGCCGAGGAGCCCGCCCATCGCTGGCTaGCAACTAGCGGGCCTCCTCTGGCTGCGAGCTGCGCGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRTRCLPRSPPIAG*QLAGLLWLRAARNS Trigger: GGAGTTCCGCGCAGCTCGCAGCCAGAGGAGGCCCGCTAGTTGCCAGCCAGCGATGGGCGGGCTCCTCGGCAGACACCGTGTACGACGTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
||
| CDS CCA 90 bp | ACCACCACGTCGTACACGGTGTCTGCCGAGGAGCCCGCCCATCGCTaGCTGGCAACTAGCGGGCCTCCTCTGGCTGCGAGCTGCGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TTTSYTVSAEEPAHR*LATSGPPLAASCAE Trigger: TTCCGCGCAGCTCGCAGCCAGAGGAGGCCCGCTAGTTGCCAGCCAGCGATGGGCGGGCTCCTCGGCAGACACCGTGTACGACGTGGTGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
||
| CDS GCA 90 bp | GCCCATCGCTGGCTGGCAACTAGCGGGCCTCCTCTGGCTGCGAGCTaGGCGGAACTCCACCAGCGAACGCAGAGCAAGCCTGCCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AHRWLATSGPPLAAS*AELHQRTQSKPAME Trigger: CTCCATGGCAGGCTTGCTCTGCGTTCGCTGGTGGAGTTCCGCGCAGCTCGCAGCCAGAGGAGGCCCGCTAGTTGCCAGCCAGCGATGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
||
| CDS-3UTR CAA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACCACCTTGGCTATACTaGGGGGCAGCTGACGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPHWEGPRARCSLSSRSPPPWLY*GAADGL Trigger: CAGCCCGTCAGCTGCCCCCAAGTATAGCCAAGGTGG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS CCA 90 bp | AGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTaGATCCCAGCAGCTTGCCTCACTCCTGACTTGTGCCCATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVATTADWSYFQLTF*IPAACLTPDLCPSA Trigger: TGCTGATGGGCACAAGTCAGGAGTGAGGCAAGCTGCTGGGATCCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CAA 90 bp | AACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGTCTCCAGGGCTTTCTTaGGACCCGCCTCCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: NHIGKAPGLGVLCHHGLQSPGLS*DPPPAT Trigger: TGTTGCTGGAGGCGGGTCCAAAGAAAGCCCTGGAGA...CTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS GCA 90 bp | CATCCTCCGGAAGGCTTTGCAGCGCATATTGCAGATGTGGTCCCATaGACCAAAACTGCTGAGCAGGGTTGTGGAGCCAGGGGATATGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPPEGFAAHIADVVP*TKTAEQGCGARGYG Trigger: TCCATATCCCCTGGCTCCACAACCCTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGCAATATGCGCTGCAAAGCCTTCCGGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
||
| CDS-3UTR CAA 90 bp | GATAAGTGGAGAGTGGCCACCACAGCAGACTGGTCGTACTTCCAGCTGACATTCTCTCCAGGGCTTTCTTaGGACCCGCCTCCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: DKWRVATTADWSYFQLTFSPGLS*DPPPAT Trigger: TGTTGCTGGAGGCGGGTCCAAAGAAAGCCCTGGAGA...GAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145522.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCCTTTTAGCATCCACCTaGGCTATACTTGGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKAPGLGVLCHHGLQKRSLLAST*AILGGS Trigger: GCTGCCCCCAAGTATAGCCAAGGTGGATGCTAAAAG...GCTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS GCA 90 bp | ATGCCCGCCGGGAGCAGAGCAATAGGCCCAGAGGGAAGAAATCTCTaGCAGGCTACATTGTTTTCTGTGGCCTCTGATAAGTGGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MPAGSRAIGPEGRNL*QATLFSVASDKWRV Trigger: CACTCTCCACTTATCAGAGGCCACAGAAAACAATGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCTCTGCTCCCGGCGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152913.8 |
||
| CDS CCA 90 bp | TTTTCTGTGGCCTCTGATAAGTGGAGAGTGGCCACCACAGCAGACTaGTCGTACTTCCAGCTGACATTCTGGATCCCAGCAGCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSVASDKWRVATTAD*SYFQLTFWIPAACL Trigger: GAGGCAAGCTGCTGGGATCCAGAATGTCAGCTGGAAGTACGACCAGTCTGCTGTGGTGGCCACTCTCCACTTATCAGAGGCCACAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCTCTCCAGGGCTTTCTTaGGACCCGCCTCCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LNHIGKAPGLGVLCHHGLSPGLS*DPPPAT Trigger: TGTTGCTGGAGGCGGGTCCAAAGAAAGCCCTGGAGA...GAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
||
| CDS-3UTR CAA 90 bp | TTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCCACCTTGGCTATACTaGGGGGCAGCTGACGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLNHIGKAPGLGVLCHHGPPWLY*GAADGL Trigger: CAGCCCGTCAGCTGCCCCCAAGTATAGCCAAGGTGG...ACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
||
| CDS GCA 90 bp | GCAGACTGGTCGTACTTCCAGCTGACATTCTGGATCCCAGCAGCTTaGCTCACTCCTGACTTGTGCCCATCAGCACCAATCAACAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ADWSYFQLTFWIPAA*LTPDLCPSAPINSL Trigger: CAAACTGTTGATTGGTGCTGATGGGCACAAGTCAGGAGTGAGGCAAGCTGCTGGGATCCAGAATGTCAGCTGGAAGTACGACCAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
||
| CDS GCA 90 bp | TCCGAGAGCGGGAGCAGAGCAATAGGCCCAGAGGGAAGAAATCTCTaGCAGGCTACATTGTTTTCTGTGGCCTCTGATAAGTGGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SESGSRAIGPEGRNL*QATLFSVASDKWRV Trigger: CACTCTCCACTTATCAGAGGCCACAGAAAACAATGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCTCTGCTCCCGCTCTCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 |
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| CDS CCA 90 bp | ATCAACAGTTTGGTCTGGAGGGTACTGCCATCACCTAGGGTAATATaGACCCAAGGGCTGGAGTCTGCCATGGAAAATGCACCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: INSLVWRVLPSPRVI*TQGLESAMENAPGQ Trigger: CTGGCCTGGTGCATTTTCCATGGCAGACTCCAGCCCTTGGGTCCATATTACCCTAGGTGATGGCAGTACCCTCCAGACCAAACTGTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
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| CDS CCA 90 bp | CTCACTCCTGACTTGTGCCCATCAGCACCAATCAACAGTTTGGTCTaGAGGGTACTGCCATCACCTAGGGTAATATGGACCCAAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LTPDLCPSAPINSLV*RVLPSPRVIWTQGL Trigger: CAGCCCTTGGGTCCATATTACCCTAGGTGATGGCAGTACCCTCCAGACCAAACTGTTGATTGGTGCTGATGGGCACAAGTCAGGAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
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| CDS-3UTR CAA 90 bp | AAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCACTCTGCCAGGCTACATaGTTTTCTGTGGCCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: KPHWEGPRARCSLSSRSPLCQAT*FSVASD Trigger: ATCAGAGGCCACAGAAAACAATGTAGCCTGGCAGAG...TGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
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| CDS-3UTR CAA 90 bp | CACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGCTCCAAAAGGCAGAGTaGATGGCATCCACGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: HIGKAPGLGVLCHHGLQKLQKAE*MASTNS Trigger: AGAATTCGTGGATGCCATCAACTCTGCCTTTTGGAG...CTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CAA 90 bp | TGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCAGAAGAGAAGCTCCAAAAGGCAGAGTaGATGGCATCCACGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: WEGPRARCSLSSRSPEEKLQKAE*MASTNS Trigger: AGAATTCGTGGATGCCATCAACTCTGCCTTTTGGAG...CTTCTCTTCTGGAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CAA 90 bp | TTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGTCTCCTTTTAGCATCCACCTaGGCTATACTTGGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LNHIGKAPGLGVLCHHGLLLAST*AILGGS Trigger: GCTGCCCCCAAGTATAGCCAAGGTGGATGCTAAAAG...GAGACCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CAA 90 bp | TTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGGCCCATGTTGACACCTaGTCCCGCGAGTGGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: FIKPHWEGPRARCSLSSRAHVDT*SREWMD Trigger: ATCCATCCACTCGCGGGACAAGGTGTCAACATGGGC...CCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS GCA 90 bp | GGAATAGCCAACAGCTTTGCTCTCATAGAGAACCTTCACTCGATCTaGCACAGCCTCCAGCTGTTTGGTGAGGGCATACATGATGACGTC | + |
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Preference number: 5 (lower is better) Translates to: GIANSFALIENLHSI*HSLQLFGEGIHDDV Trigger: GACGTCATCATGTATGCCCTCACCAAACAGCTGGAGGCTGTGGCAGATCGAGTGAAGGTTCTCTATGAGAGCAAAGCTGTTGGCTATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS-3UTR CAA 90 bp | TCTAGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTCTCCAGGGCTTTCTTaGGACCCGCCTCCAGCAACA | + |
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Preference number: 5 (lower is better) Translates to: SSVNLLNHIGKAPGLGVLSPGLS*DPPPAT Trigger: TGTTGCTGGAGGCGGGTCCAAAGAAAGCCCTGGAGA...AAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000152913.8 |
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| CDS-3UTR CAA 90 bp | TCTAGTGTAAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTGCCCATGTTGACACCTaGTCCCGCGAGTGGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: SSVNLLNHIGKAPGLGVLAHVDT*SREWMD Trigger: ATCCATCCACTCGCGGGACAAGGTGTCAACATGGGC...AAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTTACACTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CAA 90 bp | TTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCACGGGCCATAATCTGTTCTTaGAGAGGAGACACTGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: FIKPHWEGPRARCSLSSRAIICS*RGDTAF Trigger: GAACGCAGTGTCTCCTCTCAAAGAACAGATTATGGC...CCGTGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS-3UTR CAA 90 bp | AAATTTATTAAACCACATTGGGAAGGCCCCAGGGCTAGGTGTTCTTTGTCATCAGCCATAATCTGTTCTTaGAGAGGAGACACTGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: KFIKPHWEGPRARCSLSSAIICS*RGDTAF Trigger: GAACGCAGTGTCTCCTCTCAAAGAACAGATTATGGC...TGATGACAAAGAACACCTAGCCCTGGGGCCTTCCCAATGTGGTTTAATAAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 |
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| CDS CCA 72 bp | CCGCCCATCGCTGGCTGGCAACTAGCGGGCCTCCTCTaGCTGCGAGCTGCGCGGAACTCCACCAGCGAACGC | + |
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Preference number: 6 (lower is better) Translates to: PPIAGWQLAGLL*LRAARNSTSER Trigger: GCGTTCGCTGGTGGAGTTCCGCGCAGCTCGCAGCCAGAGGAGGCCCGCTAGTTGCCAGCCAGCGATGGGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS GCA 72 bp | TGGCTGGCAACTAGCGGGCCTCCTCTGGCTGCGAGCTaGGCGGAACTCCACCAGCGAACGCAGAGCAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: WLATSGPPLAAS*AELHQRTQSKP Trigger: AGGCTTGCTCTGCGTTCGCTGGTGGAGTTCCGCGCAGCTCGCAGCCAGAGGAGGCCCGCTAGTTGCCAGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS CAA 90 bp | CAGGAGTCCCACACCTGCATCCTCCGGAAGGCTTTGCAGCGCATATaGCAGATGTGGTCCCATGCACCAAAACTGCTGAGCAGGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: QESHTCILRKALQRI*QMWSHAPKLLSRVV Trigger: CACAACCCTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGCAATATGCGCTGCAAAGCCTTCCGGAGGATGCAGGTGTGGGACTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS GCA 72 bp | GAAGGCTTTGCAGCGCATATTGCAGATGTGGTCCCATaGACCAAAACTGCTGAGCAGGGTTGTGGAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: EGFAAHIADVVP*TKTAEQGCGAR Trigger: CCTGGCTCCACAACCCTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGCAATATGCGCTGCAAAGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS CCA 72 bp | ATCCTCCGGAAGGCTTTGCAGCGCATATTGCAGATGTaGTCCCATGCACCAAAACTGCTGAGCAGGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ILRKALQRILQM*SHAPKLLSRVV Trigger: CACAACCCTGCTCAGCAGTTTTGGTGCATGGGACCACATCTGCAATATGCGCTGCAAAGCCTTCCGGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS CAA 90 bp | GCTTGCCTCACTCCTGACTTGTGCCCATCAGCACCAATCAACAGTTaGGTCTGGAGGGTACTGCCATCACCTAGGGTAATATGGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: ACLTPDLCPSAPINS*VWRVLPSPRVIWTQ Trigger: TTGGGTCCATATTACCCTAGGTGATGGCAGTACCCTCCAGACCAAACTGTTGATTGGTGCTGATGGGCACAAGTCAGGAGTGAGGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
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| CDS CCA 72 bp | GACTTGTGCCCATCAGCACCAATCAACAGTTTGGTCTaGAGGGTACTGCCATCACCTAGGGTAATATGGACC | + |
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Preference number: 6 (lower is better) Translates to: DLCPSAPINSLV*RVLPSPRVIWT Trigger: GGTCCATATTACCCTAGGTGATGGCAGTACCCTCCAGACCAAACTGTTGATTGGTGCTGATGGGCACAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
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| CDS GCA 72 bp | AACAGCTTTGCTCTCATAGAGAACCTTCACTCGATCTaGCACAGCCTCCAGCTGTTTGGTGAGGGCATACAT | + |
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Preference number: 6 (lower is better) Translates to: NSFALIENLHSI*HSLQLFGEGIH Trigger: ATGTATGCCCTCACCAAACAGCTGGAGGCTGTGGCAGATCGAGTGAAGGTTCTCTATGAGAGCAAAGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS GCA 72 bp | TGGAAAATGCACCAGGCCAGGAATAGCCAACAGCTTTaGTCTCATAGAGAACCTTCACTCGATCTGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: WKMHQARNSQQL*SHREPSLDLPQ Trigger: CTGTGGCAGATCGAGTGAAGGTTCTCTATGAGAGCAAAGCTGTTGGCTATTCCTGGCCTGGTGCATTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS CAA 72 bp | AGAACCTTCACTCGATCTGCCACAGCCTCCAGCTGTTaGGTGAGGGCATACATGATGACGTCATTTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: RTFTRSATASSC*VRAYMMTSFST Trigger: AGTGGAAAATGACGTCATCATGTATGCCCTCACCAAACAGCTGGAGGCTGTGGCAGATCGAGTGAAGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000145522.2 ENSMUST00000152913.8 |
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| CDS CAA 72 bp | ACTCCTGACTTGTGCCCATCAGCACCAATCAACAGTTaGGTCTGGAGGGTACTGCCATCACCTAGGGTAATA | + |
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Preference number: 6 (lower is better) Translates to: TPDLCPSAPINS*VWRVLPSPRVI Trigger: TATTACCCTAGGTGATGGCAGTACCCTCCAGACCAAACTGTTGATTGGTGCTGATGGGCACAAGTCAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021661.13 ENSMUST00000110276.8 ENSMUST00000110278.8 ENSMUST00000152913.8 |
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