Pregenerated sensors for COQ5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041733Ensembl transcript IDs: ENSMUST00000040421.11, ENSMUST00000129024.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCACCAAACCCAGGGCCTCCACGGGCCAGGCATGTGCTCCACTaGGCTGTACCCCTAGCCCCAGATCTCAGAGGTGCTCACCGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: GAPNPGPPRARHVLH*AVPLAPDLRGAHRW Trigger: CCAGCGGTGAGCACCTCTGAGATCTGGGGCTAGGGGTACAGCTCAGTGGAGCACATGCCTGGCCCGTGGAGGCCCTGGGTTTGGTGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR CCA 90 bp | TTACAGAGAGTTGTAAGACACCGTGTAAGTGCCAGGAGCCGAGGGTaGCGTATATCTGTGTCACCTCTTCCAGGAAAGAGTAACAACCAC | + |
|
Preference number: 1 (lower is better) Translates to: LQRVVRHRVSARSRG*RISVSPLPGKSNNH Trigger: GTGGTTGTTACTCTTTCCTGGAAGAGGTGACACAGATATACGCCACCCTCGGCTCCTGGCACTTACACGGTGTCTTACAACTCTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR GCA 90 bp | CTTCCGAATACTTTCCACAAGGTATTGGTAGGACTTCCAGTCTCCTaGAATGACCTCACCAATGACAGGGATGACCTGGAAGCTGTACAG | + |
|
Preference number: 1 (lower is better) Translates to: LPNTFHKVLVGLPVS*NDLTNDRDDLEAVQ Trigger: CTGTACAGCTTCCAGGTCATCCCTGTCATTGGTGAGGTCATTGCAGGAGACTGGAAGTCCTACCAATACCTTGTGGAAAGTATTCGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR GCA 90 bp | CACAATCCCTGTAGTCAGGTTCTCGTACGTCACCCTCTGAAAGCCTaGGTCTTCAATCATGTCCTTGAAGTCCTCCTGATTTGGGAACTT | + |
|
Preference number: 1 (lower is better) Translates to: HNPCSQVLVRHPLKA*VFNHVLEVLLIWEL Trigger: AAGTTCCCAAATCAGGAGGACTTCAAGGACATGATTGAAGACGCAGGCTTTCAGAGGGTGACGTACGAGAACCTGACTACAGGGATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR TCA 90 bp | TCTCGTACGTCACCCTCTGAAAGCCTGCGTCTTCAATCATGTCCTTaGAGTCCTCCTGATTTGGGAACTTCCGAATACTTTCCACAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: SRTSPSESLRLQSCP*SPPDLGTSEYFPQG Trigger: ACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTCAAGGACATGATTGAAGACGCAGGCTTTCAGAGGGTGACGTACGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR CCA 90 bp | CTAGTGTCAGGTTCAAGATACACAGAAAATCCCTTAACATCACAATaGAGGGCAATGAGATCAGGCTCTGGCTGGTCTTGGAACTGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: LVSGSRYTENPLTSQ*RAMRSGSGWSWNWR Trigger: CCTCCAGTTCCAAGACCAGCCAGAGCCTGATCTCATTGCCCTCCATTGTGATGTTAAGGGATTTTCTGTGTATCTTGAACCTGACACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR TCA 90 bp | CTGCGGGCTTGGCTCAGCAGTGGCAGTGCTGAGATGGCACTTTTGTaGTTCTTATTTAACTTTTTATGTATGTCAACGCGTGTGTTTGTG | + |
|
Preference number: 1 (lower is better) Translates to: LRAWLSSGSAEMALL*FLFNFLCMSTRVFV Trigger: CACAAACACACGCGTTGACATACATAAAAAGTTAAATAAGAATCACAAAAGTGCCATCTCAGCACTGCCACTGCTGAGCCAAGCCCGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACGTCTCATCAGGGAGATaGTCTGGCCCCGGGGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QKPGQTFLGEGLSSLGSYVSSGR*SGPGVQ Trigger: CTGAACCCCGGGGCCAGATCATCTCCCTGATGAGAC...GTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGGAGCACCAAACCCAGGGCCTCCACGGGCCAGGCATGTGCTCCACTGAGCTGGTCAGCGTTCTGATGTaGACCACCTTAGATTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: AEHQTQGLHGPGMCSTELVSVLM*TTLDSN Trigger: ATTGGAATCTAAGGTGGTCCACATCAGAACGCTGAC...CAGCTCAGTGGAGCACATGCCTGGCCCGTGGAGGCCCTGGGTTTGGTGCTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR-3UTR CCA 90 bp | TCACAATGGAGGGCAATGAGATCAGGCTCTGGCTGGTCTTGGAACTGGAGGAACACATGCAGTCCCGCCTaGCCTGGAACTCGCTCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: SQWRAMRSGSGWSWNWRNTCSPA*PGTRSA Trigger: CGCAGAGCGAGTTCCAGGCCAGGCGGGACTGCATGT...GTTCCTCCAGTTCCAAGACCAGCCAGAGCCTGATCTCATTGCCCTCCATTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR-3UTR TCA 90 bp | CCACATTGTCAGCGTTCTGATGTGGACCACCTTAGATTCCAATCTGGTCTGAAGGTCTCATCAGGGAGATaGTCTGGCCCCGGGGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PHCQRSDVDHLRFQSGLKVSSGR*SGPGVQ Trigger: CTGAACCCCGGGGCCAGATCATCTCCCTGATGAGAC...CTTCAGACCAGATTGGAATCTAAGGTGGTCCACATCAGAACGCTGACAATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR-3UTR GCA 90 bp | CGAATGGTCAGCTACTGTCTCATCAGGGAGATGATCTGGCCCCGGGGTTCAGTACACCCTCTGAAAGCCTaGGTCTTCAATCATGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RMVSYCLIREMIWPRGSVHPLKA*VFNHVL Trigger: AAGGACATGATTGAAGACGCAGGCTTTCAGAGGGTG...TACTGAACCCCGGGGCCAGATCATCTCCCTGATGAGACAGTAGCTGACCATTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTTCCAGTGACCCATTACCCCTCTAGAAAACATCTGTCATGGAAGAAACTACGTGCTGGTTTTACCTaGCTCCCACACTGCACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: WVPVTHYPSRKHLSWKKLRAGFT*LPHCTA Trigger: AGCCGTGCAGTGTGGGAGTCAGGTAAAACCAGCACG...TAGTTTCTTCCATGACAGATGTTTTCTAGAGGGGTAATGGGTCACTGGAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACAACAAACTTGAGAATTaGAATCGTGCTGGTTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: QKPGQTFLGEGLSSLGSYNKLEN*NRAGFT Trigger: GGTAAAACCAGCACGATTGCAATTCTCAAGTTTGTT...GTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| 3UTR CAA 90 bp | GAAGTCCTCCTGATTTGGGAACTTCCGAATACTTTCCACAAGGTATaGGTAGGACTTCCAGTCTCCTGCAATGACCTCACCAATGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: EVLLIWELPNTFHKV*VGLPVSCNDLTNDR Trigger: CCTGTCATTGGTGAGGTCATTGCAGGAGACTGGAAGTCCTACCAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTAAGACACCGTGTAAGTGCCAGGAGCCGAGGGTGGCGTATATCTGTGTCACCAATTGTAAACTTCACTaGTTCACAGGTTCCTACTTC | + |
|
Preference number: 2 (lower is better) Translates to: CKTPCKCQEPRVAYICVTNCKLH*FTGSYF Trigger: GAAGTAGGAACCTGTGAAGCAGTGAAGTTTACAATT...GGTGACACAGATATACGCCACCCTCGGCTCCTGGCACTTACACGGTGTCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTTCCAGTGACCCATTACCCCTCTAGAAAACATCTGTCATGGAAGAAACTAAGTTTGAAGCCAGAGTaGATGGCCACAATCCCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: WVPVTHYPSRKHLSWKKLSLKPE*MATIPV Trigger: TACAGGGATTGTGGCCATTCACTCTGGCTTCAAACT...TAGTTTCTTCCATGACAGATGTTTTCTAGAGGGGTAATGGGTCACTGGAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTCCAGTGACCCATTACCCCTCTAGAAAACATCTGTCATGGAAGAAACTAAATGACTGGCCTGTGTaGCACAGTAGAAAAGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: WVPVTHYPSRKHLSWKKLNDWPV*HSRKGA Trigger: AGCTCCTTTTCTACTGTGGCACACAGGCCAGTCATT...TAGTTTCTTCCATGACAGATGTTTTCTAGAGGGGTAATGGGTCACTGGAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTCTGCGGAGCACCAAAAACAAACTTGAGAATTaGAATCGTGCTGGTTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: KLHCFTGSYFCLLLRSTKNKLEN*NRAGFT Trigger: GGTAAAACCAGCACGATTGCAATTCTCAAGTTTGTT...TTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR TCA 72 bp | AACCCAGGGCCTCCACGGGCCAGGCATGTGCTCCACTaGGCTGTACCCCTAGCCCCAGATCTCAGAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NPGPPRARHVLH*AVPLAPDLRGA Trigger: AGCACCTCTGAGATCTGGGGCTAGGGGTACAGCTCAGTGGAGCACATGCCTGGCCCGTGGAGGCCCTGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR GCA 72 bp | TTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTCTaGGGAGCACCAAACCCAGGGCCTCCACGGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FTASQVPTSVCF*GAPNPGPPRAR Trigger: CCTGGCCCGTGGAGGCCCTGGGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR GCA 72 bp | GTAAACTTCACTGCTTCACAGGTTCCTACTTCTGTTTaGTTCTGCGGAGCACCAAACCCAGGGCCTCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: VNFTASQVPTSV*FCGAPNPGPPR Trigger: CCGTGGAGGCCCTGGGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR CCA 72 bp | CGAATGGTCAGCTACTGTCTCATCAGGGAGATGATCTaGCCCCGGGGTTCAGTAGAAATGACTGGCCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RMVSYCLIREMI*PRGSVEMTGLC Trigger: ACACAGGCCAGTCATTTCTACTGAACCCCGGGGCCAGATCATCTCCCTGATGAGACAGTAGCTGACCATTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| 3UTR GCA 72 bp | GTAAGAGTTACAGAGAGTTGTAAGACACCGTGTAAGTaGCAGGAGCCGAGGGTGGCGTATATCTGTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: VRVTESCKTPCK*QEPRVAYICVT Trigger: GGTGACACAGATATACGCCACCCTCGGCTCCTGGCACTTACACGGTGTCTTACAACTCTCTGTAACTCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR-3UTR CAA 90 bp | CCGGGGTTCAGTAGAAATGACTGGCCTGTGTGCCACAGTAGAAAAGGAGCTAGAACTTTCCACAAGGTATaGGTAGGACTTCCAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PGFSRNDWPVCHSRKGARTFHKV*VGLPVS Trigger: GGAGACTGGAAGTCCTACCAATACCTTGTGGAAAGT...TCTAGCTCCTTTTCTACTGTGGCACACAGGCCAGTCATTTCTACTGAACCCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR TCA 72 bp | ACAATCCCTGTAGTCAGGTTCTCGTACGTCACCCTCTaGAAGCCTGCGTCTTCAATCATGTCCTTGAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TIPVVRFSYVTL*KPASSIMSLKS Trigger: GGACTTCAAGGACATGATTGAAGACGCAGGCTTTCAGAGGGTGACGTACGAGAACCTGACTACAGGGATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR CCA 72 bp | CAATGGAGGGCAATGAGATCAGGCTCTGGCTGGTCTTaGAACTGGAGGAACTGGGCTATATGCATAGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QWRAMRSGSGWS*NWRNWAICIVL Trigger: TAAGACTATGCATATAGCCCAGTTCCTCCAGTTCCAAGACCAGCCAGAGCCTGATCTCATTGCCCTCCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR TCA 72 bp | AACAAACTTGAGAATTGCAATCGTGCTGGTTTTACCTaGCTCCCACACTGCACGGCTAAGCCTCTAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NKLENCNRAGFT*LPHCTAKPLAG Trigger: TCCAGCTAGAGGCTTAGCCGTGCAGTGTGGGAGTCAGGTAAAACCAGCACGATTGCAATTCTCAAGTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| 3UTR TCA 72 bp | GTTCTGATGTGGACCACCTTAGATTCCAATCTGGTCTaGAGAGCTGGTTCAGATTCTCCTTGGGTTCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLMWTTLDSNLV*RAGSDSPWVPV Trigger: CACTGGAACCCAAGGAGAATCTGAACCAGCTCTTCAGACCAGATTGGAATCTAAGGTGGTCCACATCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR GCA 72 bp | ACTTTCCACAAGGTATTGGTAGGACTTCCAGTCTCCTaGAATGACCTCACCAATGACAGGGATGACCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TFHKVLVGLPVS*NDLTNDRDDLE Trigger: TTCCAGGTCATCCCTGTCATTGGTGAGGTCATTGCAGGAGACTGGAAGTCCTACCAATACCTTGTGGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR GCA 72 bp | TGTAGTCAGGTTCTCGTACGTCACCCTCTGAAAGCCTaGGTCTTCAATCATGTCCTTGAAGTCCTCCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: CSQVLVRHPLKA*VFNHVLEVLLI Trigger: AATCAGGAGGACTTCAAGGACATGATTGAAGACGCAGGCTTTCAGAGGGTGACGTACGAGAACCTGACTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR CCA 72 bp | GTGGACCACCTTAGATTCCAATCTGGTCTGAAGAGCTaGTTCAGATTCTCCTTGGGTTCCAGTGACCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: VDHLRFQSGLKS*FRFSLGSSDPL Trigger: TAATGGGTCACTGGAACCCAAGGAGAATCTGAACCAGCTCTTCAGACCAGATTGGAATCTAAGGTGGTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR TCA 72 bp | TCTGAAGAGCTGGTTCAGATTCTCCTTGGGTTCCAGTaGCCCATTACCCCTCTAGAAAACATCTGTCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SEELVQILLGFQ*PITPLENICHG Trigger: TCCATGACAGATGTTTTCTAGAGGGGTAATGGGTCACTGGAACCCAAGGAGAATCTGAACCAGCTCTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR TCA 72 bp | TCACCCTCTGAAAGCCTGCGTCTTCAATCATGTCCTTaGAGTCCTCCTGATTTGGGAACTTCCGAATACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPSESLRLQSCP*SPPDLGTSEYF Trigger: AAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTCAAGGACATGATTGAAGACGCAGGCTTTCAGAGGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR TCA 72 bp | AAGCCTGCGTCTTCAATCATGTCCTTGAAGTCCTCCTaGTTTGGGAACTTCCGAATACTTTCCACAAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KPASSIMSLKSS*FGNFRILSTRY Trigger: ATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTCAAGGACATGATTGAAGACGCAGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR CCA 72 bp | TGCGTCTTCAATCATGTCCTTGAAGTCCTCCTGATTTaGGAACTTCCGAATACTTTCCACAAGGTATTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CVFNHVLEVLLI*ELPNTFHKVLV Trigger: TACCAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTCAAGGACATGATTGAAGACGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR TCA 72 bp | GAAAACATCTGTCATGGAAGAAACTATGAACAAACTTaGGAATTGCAATCGTGCTGGTTTTACCTGACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ENICHGRNYEQT*ELQSCWFYLTP Trigger: GGGAGTCAGGTAAAACCAGCACGATTGCAATTCTCAAGTTTGTTCATAGTTTCTTCCATGACAGATGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCAGCAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCCATGTCGAGCAGCTaGGTCCCGGGCAGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESSRNQARHFWEKASAAWAMSSS*VPGSGC Trigger: GCACCCGCTGCCCGGGACCCAGCTGCTCGACATGGC...CCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTGCTGGACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGCAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCGGCTTTAGGACCCGATaGGCTTCCTGGAGAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQQKPGQTFLGEGLSSLGGFRTR*ASWRAW Trigger: CCAGGCTCTCCAGGAAGCCCATCGGGTCCTAAAGCC...GCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTGCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAGGTGCTCACCGCTGGGTGCCCACATTGTCAGCGTTCTGATGTGGACTCCCAGCGTGGCCCATaGCCAGGATCTATGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISEVLTAGCPHCQRSDVDSQRGP*PGSMTP Trigger: GGGTGTCATAGATCCTGGCCATGGGCCACGCTGGGA...GTCCACATCAGAACGCTGACAATGTGGGCACCCAGCGGTGAGCACCTCTGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | GTCCAGCAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCACCCGATGGGCTTCCTaGAGAGCCTGGTCAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQQKPGQTFLGEGLSSLGTRWAS*RAWSMC Trigger: ACACATTGACCAGGCTCTCCAGGAAGCCCATCGGGT...GCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTGCTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | AGGTTCCTACTTCTGTTTGCTTCTGCGGAGCACCAAACCCAGGGCCTCCACGGGCCAGCTGTGTGTCCTTaGTCCAAGGCCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFLLLFASAEHQTQGLHGPAVCP*SKAFCF Trigger: GAAGCAGAAGGCCTTGGACCAAGGACACACAGCTGG...CCCGTGGAGGCCCTGGGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR GCA 90 bp | CCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACTAATGAGAGCTGTCTCAAACCCGAAGTaGGTTTCCGCGGCTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDISGRRPQQPGQLLMRAVSNPK*VSAARF Trigger: GAAGCGAGCCGCGGAAACGCACTTCGGGTTTGAGAC...AGCTCTCATTAGTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR GCA 90 bp | CAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACTGGTCCAAGGCCTTCTaGTTCCCAACCTTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QKPGQTFLGEGLSSLGSYWSKAF*FPTFSI Trigger: GATGCTAAAGGTTGGGAAGCAGAAGGCCTTGGACCA...GTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAATTGTAAACTTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTGCCATGTCGAGCAGCTaGGTCCCGGGCAGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPNCKLHCFTGSYFCLLAMSSS*VPGSGC Trigger: GCACCCGCTGCCCGGGACCCAGCTGCTCGACATGGC...AAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGTTTACAATTTGGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | GAGTCCAGCAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGTCAGATCGTACTTCTTaGCCACGTTCTCAAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: ESSRNQARHFWEKASAAWSDRTS*PRSQTP Trigger: AGGTGTTTGAGAACGTGGCCAAGAAGTACGATCTGA...CCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTGCTGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCACAGGTTCCTACTTCTGTTTGCTTCTGCGGAGCACCAAACCCAGGGCCTTCCTTCCAAGCTCGATaGATGCCGAGACTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASQVPTSVCFCGAPNPGPSFQAR*MPRLIM Trigger: CATGATGAGTCTCGGCATCCATCGAGCTTGGAAGGA...AGGCCCTGGGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | GTAAGACACCGTGTAAGTGCCAGGAGCCGAGGGTGGCGTATATCTGTGTCACCTGCTTCCTGGAGAGCCTaGTCAATGTGTGTGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: VRHRVSARSRGWRISVSPASWRA*SMCVTF Trigger: GAATGTCACACACATTGACCAGGCTCTCCAGGAAGC...AGGTGACACAGATATACGCCACCCTCGGCTCCTGGCACTTACACGGTGTCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR CAA 72 bp | TGTAAACTTCACTGCTTCACAGGTTCCTACTTCTGTTaGCTTCTGCGGAGCACCAAACCCAGGGCCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CKLHCFTGSYFC*LLRSTKPRAST Trigger: CGTGGAGGCCCTGGGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGTTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR TCA 90 bp | CCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACTAATGAGAGCTAGTTTGAAGCCAGAGTaGATGGCCACAATCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDISGRRPQQPGQLLMRASLKPE*MATIPV Trigger: TACAGGGATTGTGGCCATTCACTCTGGCTTCAAACT...AGCTCTCATTAGTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR GCA 90 bp | TGTAAGACACCGTGTAAGTGCCAGGAGCCGAGGGTGGCGTATATCTGTGTCACCTCCAAGCTCGATGGATaGCGAGACTCATCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CKTPCKCQEPRVAYICVTSKLDG*RDSSCH Trigger: ATGACATGATGAGTCTCGGCATCCATCGAGCTTGGA...GGTGACACAGATATACGCCACCCTCGGCTCCTGGCACTTACACGGTGTCTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR TCA 90 bp | CCGGGGTTCAGTAGAAATGACTGGCCTGTGTGCCACAGTAGAAAAGGAGCTAGACCTGGTCAATGTGTGTaGCATTCCGGATCCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PGFSRNDWPVCHSRKGARPGQCV*HSGSQM Trigger: CATTTGGGATCCGGAATGTCACACACATTGACCAGG...TCTAGCTCCTTTTCTACTGTGGCACACAGGCCAGTCATTTCTACTGAACCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACGGATCCCAAATGCAATaGTGTAAACATCAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKPGQTFLGEGLSSLGSYGSQMQ*CKHQSC Trigger: ACAGCTTTGATGTTTACACCATTGCATTTGGGATCC...GTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTCTGCGGAGCACCAAACCCAGGATAGGTTTTGCTaGGTCCTTAGCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSLLHRFLLLFASAEHQTQDRFC*VLSCLL Trigger: GAGGAGACAGCTAAGGACTCAGCAAAACCTATCCTG...GGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| 3UTR CAA 72 bp | ACAATGGAGGGCAATGAGATCAGGCTCTGGCTGGTCTaGGAACTGGAGGAACTGGGCTATATGCATAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TMEGNEIRLWLV*ELEELGYMHSL Trigger: AAGACTATGCATATAGCCCAGTTCCTCCAGTTCCAAGACCAGCCAGAGCCTGATCTCATTGCCCTCCATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR GCA 90 bp | CAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACTAATGAGATTCCGGATCCCAAATaGAATGGTGTAAACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QARHFWEKASAAWAATNEIPDPK*NGVNIK Trigger: TTTGATGTTTACACCATTGCATTTGGGATCCGGAAT...CTCATTAGTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGAAGTCCTCCTGATTTGGGAACTTCCGAATACTTTCCACAAGGTATTGCCAGCTGTGTGTCCTTaGTCCAAGGCCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLEVLLIWELPNTFHKVLPAVCP*SKAFCF Trigger: GAAGCAGAAGGCCTTGGACCAAGGACACACAGCTGG...CAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTCAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGACACCGTGTAAGTGCCAGGAGCCGAGGGTGGCGTATATCTGTGTCACCTCATTCTGGTACTTTTTaGCAATTTCTTCCCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VRHRVSARSRGWRISVSPHSGTF*QFLPRI Trigger: TATCCTGGGAAGAAATTGCCAAAAAGTACCAGAATG...AGGTGACACAGATATACGCCACCCTCGGCTCCTGGCACTTACACGGTGTCTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR TCA 90 bp | GTCCTTGAAGTCCTCCTGATTTGGGAACTTCCGAATACTTTCCACAAGGTATTGCAGGATAGGTTTTGCTaGGTCCTTAGCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLEVLLIWELPNTFHKVLQDRFC*VLSCLL Trigger: GAGGAGACAGCTAAGGACTCAGCAAAACCTATCCTG...CAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGATTTGGGAACTTCCGAATACTTTCCACAAGGTATTGGTAGGACTTCCATGGTCCAAGGCCTTCTaGTTCCCAACCTTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLIWELPNTFHKVLVGLPWSKAF*FPTFSI Trigger: GATGCTAAAGGTTGGGAAGCAGAAGGCCTTGGACCA...TGGAAGTCCTACCAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| 3UTR CAA 72 bp | CTGATTTGGGAACTTCCGAATACTTTCCACAAGGTATaGGTAGGACTTCCAGTCTCCTGCAATGACCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LIWELPNTFHKV*VGLPVSCNDLT Trigger: GGTGAGGTCATTGCAGGAGACTGGAAGTCCTACCAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| CDS-3UTR TCA 90 bp | CCACACCCAAATTGTAAACTTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTCCTGGTCAATGTGTGTaGCATTCCGGATCCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PHPNCKLHCFTGSYFCLLPGQCV*HSGSQM Trigger: CATTTGGGATCCGGAATGTCACACACATTGACCAGG...AAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGTTTACAATTTGGGTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | AAACTTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTCTGCGGAGCACCAAAAGAGGGTCATTCACTTaGCCAAATTCCAGACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLHCFTGSYFCLLLRSTKRGSFT*PNSRQR Trigger: TCTCTGTCTGGAATTTGGCCAAGTGAATGACCCTCT...TTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR GCA 90 bp | CCACACCCAAATTGTAAACTTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTCACCCTCTGAAAGCCTaGGTCTTCAATCATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHPNCKLHCFTGSYFCLLHPLKA*VFNHVL Trigger: AAGGACATGATTGAAGACGCAGGCTTTCAGAGGGTG...AAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGTTTACAATTTGGGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CCA 90 bp | GATTTGGGAACTTCCGAATACTTTCCACAAGGTATTGGTAGGACTTCCAGTCTCGGATCCCAAATGCAATaGTGTAAACATCAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLGTSEYFPQGIGRTSSLGSQMQ*CKHQSC Trigger: ACAGCTTTGATGTTTACACCATTGCATTTGGGATCC...GAGACTGGAAGTCCTACCAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCCAGTGACCCATTACCCCTCTAGAAAACATCTGTCATGGAAGAAACTACATTCTGGTACTTTTTaGCAATTTCTTCCCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WVPVTHYPSRKHLSWKKLHSGTF*QFLPRI Trigger: TATCCTGGGAAGAAATTGCCAAAAAGTACCAGAATG...TAGTTTCTTCCATGACAGATGTTTTCTAGAGGGGTAATGGGTCACTGGAACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS TCA 90 bp | TGGGACAAGGACCGCGTTCCCAGCGTGGCCCATGGCCAGGATCTATaGCACCCGGGGAGCCTGCAGTGTCCCGTGGCTCGCCACCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: WDKDRVPSVAHGQDL*HPGSLQCPVARHHP Trigger: CGGGTGGTGGCGAGCCACGGGACACTGCAGGCTCCCCGGGTGTCATAGATCCTGGCCATGGGCCACGCTGGGAACGCGGTCCTTGTCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 90 bp | GGCTCGCTTCTCCTGGGACAAGGACCGCGTTCCCAGCGTGGCCCATaGCCAGGATCTATGACACCCGGGGAGCCTGCAGTGTCCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLGQGPRSQRGP*PGSMTPGEPAVSRG Trigger: GCCACGGGACACTGCAGGCTCCCCGGGTGTCATAGATCCTGGCCATGGGCCACGCTGGGAACGCGGTCCTTGTCCCAGGAGAAGCGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 90 bp | GACACGGTCTCAAACCCGAAGTGCGTTTCCGCGGCTCGCTTCTCCTaGGACAAGGACCGCGTTCCCAGCGTGGCCCATGGCCAGGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: DTVSNPKCVSAARFS*DKDRVPSVAHGQDL Trigger: TAGATCCTGGCCATGGGCCACGCTGGGAACGCGGTCCTTGTCCCAGGAGAAGCGAGCCGCGGAAACGCACTTCGGGTTTGAGACCGTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS GCA 90 bp | CCTGTGCCTCCAGCCATGTCGAGCAGCTGGGTCCCGGGCAGCGGGTaGATCTTCCTGATAAGCAAATCCTTCCAAGCTCGATGGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVPPAMSSSWVPGSG*IFLISKSFQARWMP Trigger: CGGCATCCATCGAGCTTGGAAGGATTTGCTTATCAGGAAGATGCACCCGCTGCCCGGGACCCAGCTGCTCGACATGGCTGGAGGCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS GCA 90 bp | ACTTTGCTTCCTTTCTCCCCTTCCGACACGGTCTCAAACCCGAAGTaGGTTTCCGCGGCTCGCTTCTCCTGGGACAAGGACCGCGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLPFSPSDTVSNPK*VSAARFSWDKDRVP Trigger: GGGAACGCGGTCCTTGTCCCAGGAGAAGCGAGCCGCGGAAACGCACTTCGGGTTTGAGACCGTGTCGGAAGGGGAGAAAGGAAGCAAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 90 bp | AACCGGAACGCAATGTCACCTGTGCCTCCAGCCATGTCGAGCAGCTaGGTCCCGGGCAGCGGGTGCATCTTCCTGATAAGCAAATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRNAMSPVPPAMSSS*VPGSGCIFLISKSF Trigger: GAAGGATTTGCTTATCAGGAAGATGCACCCGCTGCCCGGGACCCAGCTGCTCGACATGGCTGGAGGCACAGGTGACATTGCGTTCCGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTGTACCCCTAGCCCCAGATCTCAGAGGTGCTCACCGCTGGGTGCCCACACTTTCCACAAGGTATaGGTAGGACTTCCAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSCTPSPRSQRCSPLGAHTFHKV*VGLPVS Trigger: GGAGACTGGAAGTCCTACCAATACCTTGTGGAAAGT...GTGGGCACCCAGCGGTGAGCACCTCTGAGATCTGGGGCTAGGGGTACAGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS GCA 90 bp | AGCACCCACGCCAGTCCAGCTGTGTGTCCTTGGTCCAAGGCCTTCTaGTTCCCAACCTTTAGCATCTCCCTGTTGATGTCACAGACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: STHASPAVCPWSKAF*FPTFSISLLMSQTV Trigger: CACGGTCTGTGACATCAACAGGGAGATGCTAAAGGTTGGGAAGCAGAAGGCCTTGGACCAAGGACACACAGCTGGACTGGCGTGGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCAGAGGTGCTCACCGCTGGGTGCCCACATTGTCAGCGTTCTGATGTGGACTCCAGCTGTGTGTCCTaGGTCCAAGGCCTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISEVLTAGCPHCQRSDVDSSCVS*VQGLLL Trigger: AAGCAGAAGGCCTTGGACCAAGGACACACAGCTGGA...GTCCACATCAGAACGCTGACAATGTGGGCACCCAGCGGTGAGCACCTCTGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CAA 90 bp | GTCCAGCAGAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCGAGAGGGTCATTCACTaGGCCAAATTCCAGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQQKPGQTFLGEGLSSLGERVIH*AKFQTE Trigger: CTCTGTCTGGAATTTGGCCAAGTGAATGACCCTCTC...GCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTCTGCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CAA 90 bp | AGGTTCCTACTTCTGTTTGCTTCTGCGGAGCACCAAACCCAGGGCCTCCACGGGATCAGATCGTACTTCTaGGCCACGTTCTCAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: RFLLLFASAEHQTQGLHGIRSYF*ATFSNT Trigger: GGTGTTTGAGAACGTGGCCAAGAAGTACGATCTGAT...CCCGTGGAGGCCCTGGGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CAA 90 bp | GAAACCAGGCCAGACATTTCTGGGAGAAGGCCTCAGCAGCCTGGGCAGCTACTATTTAGCATCTCCCTGTaGATGTCACAGACCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ETRPDISGRRPQQPGQLLFSISL*MSQTVA Trigger: TGCCACGGTCTGTGACATCAACAGGGAGATGCTAAA...TAGTAGCTGCCCAGGCTGCTGAGGCCTTCTCCCAGAAATGTCTGGCCTGGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCACTGCTTCACAGGTTCCTACTTCTGTTTGCTTCTGCGGAGCACCAAACCTTTAGCATCTCCCTGTaGATGTCACAGACCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLLHRFLLLFASAEHQTFSISL*MSQTVA Trigger: TGCCACGGTCTGTGACATCAACAGGGAGATGCTAAA...GGTTTGGTGCTCCGCAGAAGCAAACAGAAGTAGGAACCTGTGAAGCAGTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS GCA 90 bp | TTCCTGGAGAGCCTGGTCAATGTGTGTGACATTCCGGATCCCAAATaGAATGGTGTAAACATCAAAGCTGTCGTCATCGAAGGGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLESLVNVCDIPDPK*NGVNIKAVVIEGQF Trigger: GAACTGCCCTTCGATGACGACAGCTTTGATGTTTACACCATTGCATTTGGGATCCGGAATGTCACACACATTGACCAGGCTCTCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 90 bp | GGCAGCGGGTGCATCTTCCTGATAAGCAAATCCTTCCAAGCTCGATaGATGCCGAGACTCATCATGTCATTCATCAGATCGTACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGCIFLISKSFQAR*MPRLIMSFIRSYFL Trigger: CAAGAAGTACGATCTGATGAATGACATGATGAGTCTCGGCATCCATCGAGCTTGGAAGGATTTGCTTATCAGGAAGATGCACCCGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGAAGTCCTCCTGATTTGGGAACTTCCGAATACTTTCCACAAGGTATTGTCCAGCTGTGTGTCCTaGGTCCAAGGCCTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLEVLLIWELPNTFHKVLSSCVS*VQGLLL Trigger: AAGCAGAAGGCCTTGGACCAAGGACACACAGCTGGA...CAATACCTTGTGGAAAGTATTCGGAAGTTCCCAAATCAGGAGGACTTCAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| CDS CCA 90 bp | GATGGATGCCGAGACTCATCATGTCATTCATCAGATCGTACTTCTTaGCCACGTTCTCAAACACCTGGTAGACTTTGCTTCCTTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DGCRDSSCHSSDRTS*PRSQTPGRLCFLSP Trigger: GGGAGAAAGGAAGCAAAGTCTACCAGGTGTTTGAGAACGTGGCCAAGAAGTACGATCTGATGAATGACATGATGAGTCTCGGCATCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS-3UTR CAA 90 bp | CTACTGTCTCATCAGGGAGATGATCTGGCCCCGGGGTTCAGTAGAAATGACTGGTCATTCTGGTACTTTTaGGCAATTTCTTCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSHQGDDLAPGFSRNDWSFWYF*AISSQD Trigger: ATCCTGGGAAGAAATTGCCAAAAAGTACCAGAATGA...CCAGTCATTTCTACTGAACCCCGGGGCCAGATCATCTCCCTGATGAGACAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS-3UTR CAA 90 bp | GAACTTCCGAATACTTTCCACAAGGTATTGGTAGGACTTCCAGTCTCCTGCAATTCATTCTGGTACTTTTaGGCAATTTCTTCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ELPNTFHKVLVGLPVSCNSFWYF*AISSQD Trigger: ATCCTGGGAAGAAATTGCCAAAAAGTACCAGAATGA...ATTGCAGGAGACTGGAAGTCCTACCAATACCTTGTGGAAAGTATTCGGAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129024.2 |
||
| CDS TCA 72 bp | GACCGCGTTCCCAGCGTGGCCCATGGCCAGGATCTATaGCACCCGGGGAGCCTGCAGTGTCCCGTGGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: DRVPSVAHGQDL*HPGSLQCPVAR Trigger: GCGAGCCACGGGACACTGCAGGCTCCCCGGGTGTCATAGATCCTGGCCATGGGCCACGCTGGGAACGCGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | AGGATCTATGACACCCGGGGAGCCTGCAGTGTCCCGTaGCTCGCCACCACCCGCGGCCGCAGACGCGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: RIYDTRGACSVP*LATTRGRRRAI Trigger: TATGGCGCGTCTGCGGCCGCGGGTGGTGGCGAGCCACGGGACACTGCAGGCTCCCCGGGTGTCATAGATCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | CTCGCTTCTCCTGGGACAAGGACCGCGTTCCCAGCGTaGCCCATGGCCAGGATCTATGACACCCGGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LASPGTRTAFPA*PMARIYDTRGA Trigger: GGCTCCCCGGGTGTCATAGATCCTGGCCATGGGCCACGCTGGGAACGCGGTCCTTGTCCCAGGAGAAGCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | TCAAACCCGAAGTGCGTTTCCGCGGCTCGCTTCTCCTaGGACAAGGACCGCGTTCCCAGCGTGGCCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SNPKCVSAARFS*DKDRVPSVAHG Trigger: GCCATGGGCCACGCTGGGAACGCGGTCCTTGTCCCAGGAGAAGCGAGCCGCGGAAACGCACTTCGGGTTTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | GCAATGTCACCTGTGCCTCCAGCCATGTCGAGCAGCTaGGTCCCGGGCAGCGGGTGCATCTTCCTGATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AMSPVPPAMSSS*VPGSGCIFLIS Trigger: GCTTATCAGGAAGATGCACCCGCTGCCCGGGACCCAGCTGCTCGACATGGCTGGAGGCACAGGTGACATTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS GCA 72 bp | CCTTTCTCCCCTTCCGACACGGTCTCAAACCCGAAGTaGGTTTCCGCGGCTCGCTTCTCCTGGGACAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PFSPSDTVSNPK*VSAARFSWDKD Trigger: GTCCTTGTCCCAGGAGAAGCGAGCCGCGGAAACGCACTTCGGGTTTGAGACCGTGTCGGAAGGGGAGAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS GCA 72 bp | CCAGCCATGTCGAGCAGCTGGGTCCCGGGCAGCGGGTaGATCTTCCTGATAAGCAAATCCTTCCAAGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PAMSSSWVPGSG*IFLISKSFQAR Trigger: TCGAGCTTGGAAGGATTTGCTTATCAGGAAGATGCACCCGCTGCCCGGGACCCAGCTGCTCGACATGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | TCTCCCAGCACCCACGCCAGTCCAGCTGTGTGTCCTTaGTCCAAGGCCTTCTGCTTCCCAACCTTTAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SPSTHASPAVCP*SKAFCFPTFSI Trigger: GATGCTAAAGGTTGGGAAGCAGAAGGCCTTGGACCAAGGACACACAGCTGGACTGGCGTGGGTGCTGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040421.11 ENSMUST00000129024.2 |
||
| CDS CCA 72 bp | AACCGGCCTCCTGGCTTTAGGACCCGATGGGCTTCCTaGAGAGCCTGGTCAATGTGTGTGACATTCCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: NRPPGFRTRWAS*RAWSMCVTFRI Trigger: GATCCGGAATGTCACACACATTGACCAGGCTCTCCAGGAAGCCCATCGGGTCCTAAAGCCAGGAGGCCGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | AGACAGAGAAACCGGCCTCCTGGCTTTAGGACCCGATaGGCTTCCTGGAGAGCCTGGTCAATGTGTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RQRNRPPGFRTR*ASWRAWSMCVT Trigger: TGTCACACACATTGACCAGGCTCTCCAGGAAGCCCATCGGGTCCTAAAGCCAGGAGGCCGGTTTCTCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | CGAGACTCATCATGTCATTCATCAGATCGTACTTCTTaGCCACGTTCTCAAACACCTGGTAGACTTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RDSSCHSSDRTS*PRSQTPGRLCF Trigger: GAAGCAAAGTCTACCAGGTGTTTGAGAACGTGGCCAAGAAGTACGATCTGATGAATGACATGATGAGTCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||
| CDS CCA 72 bp | TGCATCTTCCTGATAAGCAAATCCTTCCAAGCTCGATaGATGCCGAGACTCATCATGTCATTCATCAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: CIFLISKSFQAR*MPRLIMSFIRS Trigger: CGATCTGATGAATGACATGATGAGTCTCGGCATCCATCGAGCTTGGAAGGATTTGCTTATCAGGAAGATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040421.11 |
||