Pregenerated sensors for COQ4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026798Ensembl transcript IDs: ENSMUST00000028137.10, ENSMUST00000143616.8, ENSMUST00000148791.2, ENSMUST00000176348.8
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCTGTGTGGCAGCTCAAGCTAGGCCAGGCCCTGGATATGTTTTaGGGGAGGACTGATGCCCAGCTCCTCCCGCAGGGCTGTCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LPVWQLKLGQALDMF*GRTDAQLLPQGCQG Trigger: CCCCTGACAGCCCTGCGGGAGGAGCTGGGCATCAGTCCTCCCCCAAAACATATCCAGGGCCTGGCCTAGCTTGAGCTGCCACACAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| 3UTR TCA 90 bp | GCAGGGCTGTCAGGGGCTGCTCCCAACGCTGCTCATAGTAGATGTTaGGGACACATGGGGCCCTGCGCCCGTTCTGAATCGCCCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: AGLSGAAPNAAHSRC*GHMGPCARSESPKG Trigger: TCCCTTGGGCGATTCAGAACGGGCGCAGGGCCCCATGTGTCCTCAACATCTACTATGAGCAGCGTTGGGAGCAGCCCCTGACAGCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| 3UTR GCA 90 bp | ACATACTGCTCTCTCCGGATGGCTCACAGCAGCCTGGGGCTCCATTaGTCTGCCTCTCTCTCCTGGGCTGGCCCTGAAGGTACAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TYCSLRMAHSSLGLH*SASLSWAGPEGTRQ Trigger: CTGCCTTGTACCTTCAGGGCCAGCCCAGGAGAGAGAGGCAGAGCAATGGAGCCCCAGGCTGCTGTGAGCCATCCGGAGAGAGCAGTATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR CCA 90 bp | CAGGGGCTGCTCCCAACGCTGCTCATAGTAGATGTTGAGGACACATaGGGCCCTGCGCCCGTTCTGAATCGCCCAAGGGATCAGCTCCGA | + |
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Preference number: 1 (lower is better) Translates to: QGLLPTLLIVDVEDT*GPAPVLNRPRDQLR Trigger: TCGGAGCTGATCCCTTGGGCGATTCAGAACGGGCGCAGGGCCCCATGTGTCCTCAACATCTACTATGAGCAGCGTTGGGAGCAGCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| 3UTR CCA 90 bp | TCAGCTCCGAGAACAGCACTTGGAGGCTCTGAGTACGGAGGCGGATaGGTCCGAAGAGTGCTCCCAGGATGCACATTGGTAGGCCGGTCT | + |
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Preference number: 1 (lower is better) Translates to: SAPRTALGGSEYGGG*VRRVLPGCTLVGRS Trigger: AGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTTCGGACCCATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| 3UTR GCA 90 bp | GTTTGGTGGGGTCCAGTCTCTCTCATCCGAGCATGTTGGTGGGCATaGCCAGCAGGGTGTGGAGCATGTCGTGCACTTCACGGTACCTCT | + |
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Preference number: 1 (lower is better) Translates to: VWWGPVSLIRACWWA*PAGCGACRALHGTS Trigger: AGAGGTACCGTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACCCCACCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR GCA 90 bp | GGCTCTGAGTACGGAGGCGGATGGGTCCGAAGAGTGCTCCCAGGATaGACATTGGTAGGCCGGTCTGCACAGCCTCAAACCACTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: GSEYGGGWVRRVLPG*TLVGRSAQPQTTLP Trigger: TGGTAAAGTGGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTTCGGACCCATCCGCCTCCGTACTCAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| 3UTR CCA 90 bp | TGTAAGGTTTGGTGGGGTCCAGTCTCTCTCATCCGAGCATGTTGGTaGGCATGCCCAGCAGGGTGTGGAGCATGTCGTGCACTTCACGGT | + |
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Preference number: 1 (lower is better) Translates to: CKVWWGPVSLIRACW*ACPAGCGACRALHG Trigger: ACCGTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACCCCACCAAACCTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR CCA 90 bp | CACTGTAAGGTTTGGTGGGGTCCAGTCTCTCTCATCCGAGCATGTTaGTGGGCATGCCCAGCAGGGTGTGGAGCATGTCGTGCACTTCAC | + |
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Preference number: 1 (lower is better) Translates to: HCKVWWGPVSLIRAC*WACPAGCGACRALH Trigger: GTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACCCCACCAAACCTTACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR CCA 90 bp | GCACAGCCTCAAACCACTTTACCACAACCTCTCCGAGCATGTTGGTaGGCATGCCCAGCAGGGTGTGGAGCATGTCGTGCACTTCACGGT | + |
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Preference number: 1 (lower is better) Translates to: AQPQTTLPQPLRACW*ACPAGCGACRALHG Trigger: ACCGTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGTTGTGGTAAAGTGGTTTGAGGCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
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| 3UTR GCA 90 bp | CCTCAAACCACTTTACCACAACCTCTCCGAGCATGTTGGTGGGCATaGCCAGCAGGGTGTGGAGCATGTCGTGCACTTCACGGTACCTCT | + |
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Preference number: 1 (lower is better) Translates to: PQTTLPQPLRACWWA*PAGCGACRALHGTS Trigger: AGAGGTACCGTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGTTGTGGTAAAGTGGTTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
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| 3UTR GCA 90 bp | ATGGGTCCGAAGAGTGCTCCCAGGATGCACATTGGTAGGCCGGTCTaGACAGCCTCAAACCACTTTACCACAACCTCTCCGAGCATGTTG | + |
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Preference number: 1 (lower is better) Translates to: MGPKSAPRMHIGRPV*TASNHFTTTSPSML Trigger: CAACATGCTCGGAGAGGTTGTGGTAAAGTGGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTTCGGACCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
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| 3UTR CCA 90 bp | ACCAGTGATGTTGAAATGGCCCCCGAGAAGCACTGTAAGGTTTGGTaGGGTCCAGTCTCTCTCATCCGAGCATGTTGGTGGGCATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TSDVEMAPEKHCKVW*GPVSLIRACWWACP Trigger: TGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACCCCACCAAACCTTACAGTGCTTCTCGGGGGCCATTTCAACATCACTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR GCA 90 bp | ATGGGTCCGAAGAGTGCTCCCAGGATGCACATTGGTAGGCCGGTCTaGACAGCCTCAAACCACTTTACCACAACCTCTCCTAGCGATAAG | + |
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Preference number: 1 (lower is better) Translates to: MGPKSAPRMHIGRPV*TASNHFTTTSPSDK Trigger: CTTATCGCTAGGAGAGGTTGTGGTAAAGTGGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTTCGGACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR CCA 90 bp | ACAAAAGCAGCTGAGAGGCTCTTTTGTCCCGAGGAAGGCAGTGTGTaGAGAGAAAGGCTTAATTCTCCCTGTGTGGCAGCTCAAGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: TKAAERLFCPEEGSV*RERLNSPCVAAQAR Trigger: CCTAGCTTGAGCTGCCACACAGGGAGAATTAAGCCTTTCTCTCCACACACTGCCTTCCTCGGGACAAAAGAGCCTCTCAGCTGCTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR TCA 90 bp | CTGCCTCTCTCTCCTGGGCTGGCCCTGAAGGTACAAGGCAGCAAGTaGCACTCTGAGTTCAAGGTTCAAAGAGAAGAAACAAAAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LPLSPGLALKVQGSK*HSEFKVQREETKAA Trigger: AGCTGCTTTTGTTTCTTCTCTTTGAACCTTGAACTCAGAGTGTCACTTGCTGCCTTGTACCTTCAGGGCCAGCCCAGGAGAGAGAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR CCA 90 bp | TCCAGAAGAGGAGCCTCAGACTGCAATGATCAGTATGATCCAATATaGCTGTTCGAGGCATACATACTGCTCTCTCCGGATGGCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: SRRGASDCNDQYDPI*LFEAYILLSPDGSQ Trigger: CTGTGAGCCATCCGGAGAGAGCAGTATGTATGCCTCGAACAGCCATATTGGATCATACTGATCATTGCAGTCTGAGGCTCCTCTTCTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR CCA 90 bp | ATTCCTAGACTGCTTGCCTTAAGACCCAATGACAGCAACATCAACTaGAGTCCAACTGGGACGGAATTCCCCTCACCAATACCTCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: IPRLLALRPNDSNIN*SPTGTEFPSPIPQA Trigger: TGCCTGAGGTATTGGTGAGGGGAATTCCGTCCCAGTTGGACTCCAGTTGATGTTGCTGTCATTGGGTCTTAAGGCAAGCAGTCTAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR TCA 90 bp | CACAGGTGTGAGTGCATGCACACCATGGCATGTTTGTGCTGGTCATaGCAACTTGCAGATGTTGTTTTTCACCTTCCACTTTGTGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: HRCECMHTMACLCWS*QLADVVFHLPLCGS Trigger: AGACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCATGACCAGCACAAACATGCCATGGTGTGCATGCACTCACACCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR CCA 90 bp | CTGGTCATGACAACTTGCAGATGTTGTTTTTCACCTTCCACTTTGTaGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACATGT | + |
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Preference number: 1 (lower is better) Translates to: LVMTTCRCCFSPSTL*VLGTEVRSSGLVTC Trigger: ACATGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCATGACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR TCA 90 bp | TTTGTGGGCATGTATTTATATGCACCACCAGAGTGCCTGGGATCCTaGAATCAGAAGACAGCATTAGGTCCTAGAACTGGAGTTAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: FVGMYLYAPPECLGS*NQKTALGPRTGVKG Trigger: ACCCTTAACTCCAGTTCTAGGACCTAATGCTGTCTTCTGATTTCAGGATCCCAGGCACTCTGGTGGTGCATATAAATACATGCCCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR GCA 90 bp | GTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTaGTTTCACATTTGTAAGTCATCCAATAAGCCCTGTTTTATTTGT | + |
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Preference number: 1 (lower is better) Translates to: VGLGDGSQVFRFGDM*FHICKSSNKPCFIC Trigger: ACAAATAAAACAGGGCTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR GCA 90 bp | CATCACTTTAGTTTTCACACTTTATTTTGCACAGGTGTGAGTGCATaGACACCATGGCATGTTTGTGCTGGTCATGACAACTTGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: HHFSFHTLFCTGVSA*TPWHVCAGHDNLQM Trigger: CATCTGCAAGTTGTCATGACCAGCACAAACATGCCATGGTGTGCATGCACTCACACCTGTGCAAAATAAAGTGTGAAAACTAAAGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR GCA 90 bp | ACATGGGGCCCTGCGCCCGTTCTGAATCGCCCAAGGGATCAGCTCCGAGAACAGGGGGCTCCATTGCTCTaGCTCTCTCTCCTGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TWGPAPVLNRPRDQLREQGAPLL*LSLLGW Trigger: CCAGCCCAGGAGAGAGAGGCAGAGCAATGGAGCCCC...CTGTTCTCGGAGCTGATCCCTTGGGCGATTCAGAACGGGCGCAGGGCCCCATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR CAA 90 bp | GCGCCCGTTCTGAATCGCCCAAGGGATCAGCTCCGAGAACAGCACTaGGAGGCTCTGAGTACGGAGGCGGATGGGTCCGAAGAGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: APVLNRPRDQLREQH*EALSTEADGSEECS Trigger: GGAGCACTCTTCGGACCCATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGCTGATCCCTTGGGCGATTCAGAACGGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCTCTCTCCTGGGCTGGCCCTGAAGGTACAAGGCAGCAAGTGACACTCTGGCTCACAGCAGCCTaGGGCTCCATTGCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SASLSWAGPEGTRQQVTLWLTAA*GSIALP Trigger: AGGCAGAGCAATGGAGCCCCAGGCTGCTGTGAGCCA...GAGTGTCACTTGCTGCCTTGTACCTTCAGGGCCAGCCCAGGAGAGAGAGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCTCTCTCCTGGGCTGGCCCTGAAGGTACAAGGCAGCAAGTGACACTCATCCGAGCATGTTGGTaGGCATGCCCAGCAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SASLSWAGPEGTRQQVTLIRACW*ACPAGC Trigger: ACACCCTGCTGGGCATGCCCACCAACATGCTCGGAT...GAGTGTCACTTGCTGCCTTGTACCTTCAGGGCCAGCCCAGGAGAGAGAGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTGCTCCCAGGATGCACATTGGTAGGCCGGTCTGCACAGCCTCAAACCACCTCCGAGCATGTTGGTaGGCATGCCCAGCAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KSAPRMHIGRPVCTASNHLRACW*ACPAGC Trigger: ACACCCTGCTGGGCATGCCCACCAACATGCTCGGAG...GTGGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCACTTTGTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACAAGCCTGGGGCTCCATTaGTCTGCCTCTCTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSTLWVLGTEVRSSGLVTSLGLH*SASLSW Trigger: CCAGGAGAGAGAGGCAGAGCAATGGAGCCCCAGGCT...TGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR TCA 90 bp | CGAGGCATACATACTGCTCTCTCCGGATGGCTCACAGCAGCCTGGGGCTCCATTAGAAACAAAAGCAGCTaGGAGGCTCTTTTGTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: RGIHTALSGWLTAAWGSIRNKSS*EALLSR Trigger: TCGGGACAAAAGAGCCTCTCAGCTGCTTTTGTTTCT...AATGGAGCCCCAGGCTGCTGTGAGCCATCCGGAGAGAGCAGTATGTATGCCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGATCAGCTCCGAGAACAGCACTTGGAGGCTCTGAGTACGGAGGCGGATAGAAACAAAAGCAGCTaGGAGGCTCTTTTGTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: PRDQLREQHLEALSTEADRNKSS*EALLSR Trigger: TCGGGACAAAAGAGCCTCTCAGCTGCTTTTGTTTCT...ATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGCTGATCCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCTAGGACAACCAGCAGACTCTAGGCCTGATGGGAGCTTTATTCAGACACCATGGCTCACAGCAGCCTaGGGCTCCATTGCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SLGQPADSRPDGSFIQTPWLTAA*GSIALP Trigger: AGGCAGAGCAATGGAGCCCCAGGCTGCTGTGAGCCA...TGGTGTCTGAATAAAGCTCCCATCAGGCCTAGAGTCTGCTGGTTGTCCTAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCTAGGACAACCAGCAGACTCTAGGCCTGATGGGAGCTTTATTCAGACACCAATGCCCAGCAGGGTGTaGAGCATGTCGTGCACTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLGQPADSRPDGSFIQTPMPSRV*SMSCTS Trigger: TGAAGTGCACGACATGCTCCACACCCTGCTGGGCAT...TGGTGTCTGAATAAAGCTCCCATCAGGCCTAGAGTCTGCTGGTTGTCCTAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | GCATTAGGTCCTAGAACTGGAGTTAAGGGTAGTTATGAATCACCACATGGGTGCGAGTACGGAGGCGGATaGGTCCGAAGAGTGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ALGPRTGVKGSYESPHGCEYGGG*VRRVLP Trigger: TGGGAGCACTCTTCGGACCCATCCGCCTCCGTACTC...GCACCCATGTGGTGATTCATAACTACCCTTAACTCCAGTTCTAGGACCTAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR-3UTR GCA 90 bp | TCCACTTTGTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTGGGCATGTATTTATATaGACCACCAGAGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: STLWVLGTEVRSSGLVTCGHVFI*TTRVPG Trigger: CCCAGGCACTCTGGTGGTGCATATAAATACATGCCC...ACATGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR TCA 90 bp | TCCACTTTGTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTTGCCTTAAGACCCAATaGCAGCAACATCAACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: STLWVLGTEVRSSGLVTCCLKTQ*QQHQLE Trigger: CTCCAGTTGATGTTGCTGTCATTGGGTCTTAAGGCA...ACATGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGGCATGTATTTATATGCACCACCAGAGTGCCTGGGATCCTGAAATCAGAGCTCATAGTAGATGTTaGGGACACATGGGGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LWACIYMHHQSAWDPEIRAHSRC*GHMGPC Trigger: GCAGGGCCCCATGTGTCCTCAACATCTACTATGAGC...TCTGATTTCAGGATCCCAGGCACTCTGGTGGTGCATATAAATACATGCCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGATTGCTGCTGTTCCTCAGCTGATGTCAAAAGTCTGGCTTACAAATACAAGCCTGGGGCTCCATTaGTCTGCCTCTCTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: IGIAAVPQLMSKVWLTNTSLGLH*SASLSW Trigger: CCAGGAGAGAGAGGCAGAGCAATGGAGCCCCAGGCT...TGTATTTGTAAGCCAGACTTTTGACATCAGCTGAGGAACAGCAGCAATCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR GCA 90 bp | AACCGTTATCTTTCTAGTCTGTGGGTGCTGGGATTGGAATCATGTCTGCAGACTTCCTCCCCACCAGTCTaGTCAGGGCTTGGTAACATG | + |
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Preference number: 2 (lower is better) Translates to: NRYLSSLWVLGLESCLQTSSPPV*SGLGNM Trigger: CATGTTACCAAGCCCTGAGCAGACTGGTGGGGAGGA...AGTCTGCAGACATGATTCCAATCCCAGCACCCACAGACTAGAAAGATAACGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACATCAACTGGAGTCCAACTGGGACGGAATTCCCCTCACCAATACCTCAGGGAGGAAGGCAGTGTGTaGAGAGAAAGGCTTAATTCT | + |
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Preference number: 2 (lower is better) Translates to: ATSTGVQLGRNSPHQYLREEGSV*RERLNS Trigger: AGAATTAAGCCTTTCTCTCCACACACTGCCTTCCTC...CCTGAGGTATTGGTGAGGGGAATTCCGTCCCAGTTGGACTCCAGTTGATGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATGATGTTGAGGACACATaGGGCCCTGCGCCCGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: TEVRSSGLVTCAFTFVSHDVEDT*GPAPVL Trigger: CAGAACGGGCGCAGGGCCCCATGTGTCCTCAACATC...ATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTGACTTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
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| 3UTR CAA 90 bp | GTGCTGGTCATGACAACTTGCAGATGTTGTTTTTCACCTTCCACTTaGTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: VLVMTTCRCCFSPST*WVLGTEVRSSGLVT Trigger: TGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCATGACCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGGGATTGCTGCTGTTCCTCAGCTGATGTCAAAAGTCTGGCTTACAAATACTCCTCCCCACCAGTCTaGTCAGGGCTTGGTAACATG | + |
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Preference number: 2 (lower is better) Translates to: HRDCCCSSADVKSLAYKYSSPPV*SGLGNM Trigger: CATGTTACCAAGCCCTGAGCAGACTGGTGGGGAGGA...GTATTTGTAAGCCAGACTTTTGACATCAGCTGAGGAACAGCAGCAATCCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGGGATTGCTGCTGTTCCTCAGCTGATGTCAAAAGTCTGGCTTACAAATACCAACTGGAGTCCAACTaGGACGGAATTCCCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: HRDCCCSSADVKSLAYKYQLESN*DGIPLT Trigger: GGTGAGGGGAATTCCGTCCCAGTTGGACTCCAGTTG...GTATTTGTAAGCCAGACTTTTGACATCAGCTGAGGAACAGCAGCAATCCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTTTCCAGTGCTTAGCTGCTGAGACATCTCCCCAAACCATCACTTTAGTTTTGCACAGGTGTGAGTaGATGCACACCATGGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: PVFQCLAAETSPQTITLVLHRCE*MHTMAC Trigger: ACATGCCATGGTGTGCATGCACTCACACCTGTGCAA...AACTAAAGTGATGGTTTGGGGAGATGTCTCAGCAGCTAAGCACTGGAAAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGGGCATGTATTTATATGCACCACCAGAGTGCCTGGGATCCTGAAATCAGAGAATCACCACATGGGTaGTGGGAATTAAACCGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LWACIYMHHQSAWDPEIRESPHG*WELNRV Trigger: GACCCGGTTTAATTCCCAGCACCCATGTGGTGATTC...TCTGATTTCAGGATCCCAGGCACTCTGGTGGTGCATATAAATACATGCCCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CCA 90 bp | GCATTAGGTCCTAGAACTGGAGTTAAGGGTAGTTATGAATCACCACATGGGTGCCTAGTCTGTGGGTGCTaGGATTGGAATCATGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ALGPRTGVKGSYESPHGCLVCGC*DWNHVC Trigger: GCAGACATGATTCCAATCCCAGCACCCACAGACTAG...GCACCCATGTGGTGATTCATAACTACCCTTAACTCCAGTTCTAGGACCTAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CAA 90 bp | ATGACAACTTGCAGATGTTGTTTTTCACCTTCCACTTTGTGGGTCTaGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: MTTCRCCFSPSTLWV*GTEVRSSGLVTCAF Trigger: GAAAGCACATGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAGGGATTGCTGCTGTTCCTCAGCTGATGTCAAAAGTCTGGCTTACAAATACTATTTTGCACAGGTGTaGGTGCATGCACACCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: HRDCCCSSADVKSLAYKYYFAQV*VHAHHG Trigger: GCCATGGTGTGCATGCACTCACACCTGTGCAAAATA...GTATTTGTAAGCCAGACTTTTGACATCAGCTGAGGAACAGCAGCAATCCCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTTCTGATGGTTGGGGACTTGATTCCTAGACTGCTTGCCTTAAGACCCAATTATTTTGCACAGGTGTaGGTGCATGCACACCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: SFLMVGDLIPRLLALRPNYFAQV*VHAHHG Trigger: GCCATGGTGTGCATGCACTCACACCTGTGCAAAATA...ATTGGGTCTTAAGGCAAGCAGTCTAGGAATCAAGTCCCCAACCATCAGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTTTGTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTCTGATGTCAAAAGTCTaGCTTACAAATACAAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: STLWVLGTEVRSSGLVTCLMSKV*LTNTRD Trigger: GTCCCTTGTATTTGTAAGCCAGACTTTTGACATCAG...ACATGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CAA 90 bp | GCTTACAAATACAAGGGACTTGTTAGTTTTCTGATGGTTGGGGACTaGATTCCTAGACTGCTTGCCTTAAGACCCAATGACAGCAACATC | + |
|
Preference number: 2 (lower is better) Translates to: AYKYKGLVSFLMVGD*IPRLLALRPNDSNI Trigger: GATGTTGCTGTCATTGGGTCTTAAGGCAAGCAGTCTAGGAATCAAGTCCCCAACCATCAGAAAACTAACAAGTCCCTTGTATTTGTAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTCTTCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATCCAATAAGGGTCCTGTTTTCCAGTaGTTAGCTGCTGAGACATCT | + |
|
Preference number: 2 (lower is better) Translates to: QVFRFGDMCFHICKSSNKGPVFQ*LAAETS Trigger: AGATGTCTCAGCAGCTAAGCACTGGAAAACAGGACC...CTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGTAGTCAAGCTTTCGAAGACAGCTTGACAAAACGCCCTGTCAGAGTCACTCAGTATGATCCAATATaGCTGTTCGAGGCATACATA | + |
|
Preference number: 2 (lower is better) Translates to: CSSQAFEDSLTKRPVRVTQYDPI*LFEAYI Trigger: TATGTATGCCTCGAACAGCCATATTGGATCATACTG...AGTGACTCTGACAGGGCGTTTTGTCAAGCTGTCTTCGAAAGCTTGACTACTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATCCAATAAGCCCTGAGGAAGGCAGTGTGTaGAGAGAAAGGCTTAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SSGLVTCAFTFVSHPISPEEGSV*RERLNS Trigger: AGAATTAAGCCTTTCTCTCCACACACTGCCTTCCTC...AGGGCTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGCTGCTGAGACATCTCCCCAAACCATCACTTTAGTTTTCACACTTTATTTTCTAGTCTGTGGGTGCTaGGATTGGAATCATGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LAAETSPQTITLVFTLYFLVCGC*DWNHVC Trigger: GCAGACATGATTCCAATCCCAGCACCCACAGACTAG...AAAATAAAGTGTGAAAACTAAAGTGATGGTTTGGGGAGATGTCTCAGCAGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCTGCTGAGACATCTCCCCAAACCATCACTTTAGTTTTCACACTTTATTTTTGCCTTAAGACCCAATaGCAGCAACATCAACTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LAAETSPQTITLVFTLYFCLKTQ*QQHQLE Trigger: CTCCAGTTGATGTTGCTGTCATTGGGTCTTAAGGCA...AAAATAAAGTGTGAAAACTAAAGTGATGGTTTGGGGAGATGTCTCAGCAGCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCTGCTGAGACATCTCCCCAAACCATCACTTTAGTTTTCACACTTTATTTTCAGGGCTTGGTAACATaGTGTAGTAGTCAAGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LAAETSPQTITLVFTLYFQGLVT*CSSQAF Trigger: GAAAGCTTGACTACTACATCATGTTACCAAGCCCTG...AAAATAAAGTGTGAAAACTAAAGTGATGGTTTGGGGAGATGTCTCAGCAGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCTGCTGAGACATCTCCCCAAACCATCACTTTAGTTTTCACACTTTATTTTGGTCTTCAGGTTTGGTaGCATGTGCTTTCACATTTG | + |
|
Preference number: 2 (lower is better) Translates to: LAAETSPQTITLVFTLYFGLQVW*HVLSHL Trigger: CAAATGTGAAAGCACATGTCACCAAACCTGAAGACC...AAAATAAAGTGTGAAAACTAAAGTGATGGTTTGGGGAGATGTCTCAGCAGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | TGGCAGCTCAAGCTAGGCCAGGCCCTGGATATGTTTTaGGGGAGGACTGATGCCCAGCTCCTCCCGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WQLKLGQALDMF*GRTDAQLLPQG Trigger: GCCCTGCGGGAGGAGCTGGGCATCAGTCCTCCCCCAAAACATATCCAGGGCCTGGCCTAGCTTGAGCTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR TCA 72 bp | CAAGGGATCAGCTCCGAGAACAGCACTTGGAGGCTCTaGGTACGGAGGCGGATGGGTCCGAAGAGTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QGISSENSTWRL*VRRRMGPKSAP Trigger: GGGAGCACTCTTCGGACCCATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGCTGATCCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR GCA 72 bp | TACGGAGGCGGATGGGTCCGAAGAGTGCTCCCAGGATaGACATTGGTAGGCCGGTCTGCACAGCCTCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: YGGGWVRRVLPG*TLVGRSAQPQT Trigger: GGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTTCGGACCCATCCGCCTCCGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR CCA 72 bp | TGGTGGGGTCCAGTCTCTCTCATCCGAGCATGTTGGTaGGCATGCCCAGCAGGGTGTGGAGCATGTCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: WWGPVSLIRACW*ACPAGCGACRA Trigger: TGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATCGCCCAAGGGATCAGCTCCGAGAACAGCACTTGGAGGCTCTGAGTACGACCTCTCCGAGCATGTaGGTGGGCATGCCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LNRPRDQLREQHLEALSTTSPSM*VGMPSR Trigger: CCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGT...CGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGCTGATCCCTTGGGCGATTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
||
| 3UTR GCA 72 bp | GGTCCAGTCTCTCTCATCCGAGCATGTTGGTGGGCATaGCCAGCAGGGTGTGGAGCATGTCGTGCACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPVSLIRACWWA*PAGCGACRALH Trigger: GTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | GTTTGGTGGGGTCCAGTCTCTCTCATCCGAGCATGTTaGTGGGCATGCCCAGCAGGGTGTGGAGCATGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: VWWGPVSLIRAC*WACPAGCGACR Trigger: ACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACCCCACCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCACTTTGTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACACAGCCTGGGGCTCCATaGCTCTGCCTCTCTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSTLWVLGTEVRSSGLVTQPGAP*LCLSLL Trigger: CAGGAGAGAGAGGCAGAGCAATGGAGCCCCAGGCTG...TGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGTTGGGATTAAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSVGIKGV Trigger: CACGCCTTTAATCCCAACACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | ATGGCTGTTCGAGGCATACATACTGCTCTCTCCGGATaGCTCACAGCAGCCTGGGGCTCCATTGCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: MAVRGIHTALSG*LTAAWGSIALP Trigger: AGGCAGAGCAATGGAGCCCCAGGCTGCTGTGAGCCATCCGGAGAGAGCAGTATGTATGCCTCGAACAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | CTCCCAACGCTGCTCATAGTAGATGTTGAGGACACATaGGGCCCTGCGCCCGTTCTGAATCGCCCAAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LPTLLIVDVEDT*GPAPVLNRPRD Trigger: ATCCCTTGGGCGATTCAGAACGGGCGCAGGGCCCCATGTGTCCTCAACATCTACTATGAGCAGCGTTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR GCA 72 bp | ACTTTACCACAACCTCTCCGAGCATGTTGGTGGGCATaGCCAGCAGGGTGTGGAGCATGTCGTGCACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TLPQPLRACWWA*PAGCGACRALH Trigger: GTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGTTGTGGTAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
||
| 3UTR CCA 72 bp | AGAACAGCACTTGGAGGCTCTGAGTACGGAGGCGGATaGGTCCGAAGAGTGCTCCCAGGATGCACATTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RTALGGSEYGGG*VRRVLPGCTLV Trigger: TACCAATGTGCATCCTGGGAGCACTCTTCGGACCCATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR CCA 72 bp | CAAACCACTTTACCACAACCTCTCCGAGCATGTTGGTaGGCATGCCCAGCAGGGTGTGGAGCATGTCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QTTLPQPLRACW*ACPAGCGACRA Trigger: TGCACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGTTGTGGTAAAGTGGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
||
| 3UTR CCA 72 bp | CCTCAAACCACTTTACCACAACCTCTCCGAGCATGTTaGTGGGCATGCCCAGCAGGGTGTGGAGCATGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: PQTTLPQPLRAC*WACPAGCGACR Trigger: ACGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGTTGTGGTAAAGTGGTTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
||
| 3UTR GCA 72 bp | AAGAGTGCTCCCAGGATGCACATTGGTAGGCCGGTCTaGACAGCCTCAAACCACTTTACCACAACCTCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: KSAPRMHIGRPV*TASNHFTTTSP Trigger: CGGAGAGGTTGTGGTAAAGTGGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
||
| 3UTR GCA 72 bp | AAGAGTGCTCCCAGGATGCACATTGGTAGGCCGGTCTaGACAGCCTCAAACCACTTTACCACAACCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KSAPRMHIGRPV*TASNHFTTTSP Trigger: AGGAGAGGTTGTGGTAAAGTGGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | GCTGAGAGGCTCTTTTGTCCCGAGGAAGGCAGTGTGTaGAGAGAAAGGCTTAATTCTCCCTGTGTGGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AERLFCPEEGSV*RERLNSPCVAA Trigger: AGCTGCCACACAGGGAGAATTAAGCCTTTCTCTCCACACACTGCCTTCCTCGGGACAAAAGAGCCTCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | TGGGTGCTGGGAATTAAACCGGGTCCTGTTTTCCAGTaGTTAGCTGCTGAGACATCTCCCCAAACCATCACT | + |
|
Preference number: 3 (lower is better) Translates to: WVLGIKPGPVFQ*LAAETSPQTIT Trigger: AGTGATGGTTTGGGGAGATGTCTCAGCAGCTAAGCACTGGAAAACAGGACCCGGTTTAATTCCCAGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTCAAGGTTCAAAGAGAAGAAACAAAAGCAGCTGAGAGGCTCTTTTGTCCCCTCCGAGAACAGCACTaGGAGGCTCTGAGTACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EFKVQREETKAAERLFCPLREQH*EALSTE Trigger: CTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAG...GGGACAAAAGAGCCTCTCAGCTGCTTTTGTTTCTTCTCTTTGAACCTTGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
||
| 3UTR TCA 72 bp | TCTCCTGGGCTGGCCCTGAAGGTACAAGGCAGCAAGTaGCACTCTGAGTTCAAGGTTCAAAGAGAAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SPGLALKVQGSK*HSEFKVQREET Trigger: TGTTTCTTCTCTTTGAACCTTGAACTCAGAGTGTCACTTGCTGCCTTGTACCTTCAGGGCCAGCCCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR TCA 72 bp | TCTCCTCCCCACCAGTCTGCTCAGGGCTTGGTAACATaGTGTAGTAGTCAAGCTTTCGAAGACAGCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SPPHQSAQGLVT*CSSQAFEDSLT Trigger: TGTCAAGCTGTCTTCGAAAGCTTGACTACTACATCATGTTACCAAGCCCTGAGCAGACTGGTGGGGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | TTGATGGAGGTGCCTTTACCACTGACCCATAGGGATTaGTGCTGTTCCTCAGCTGATGTCAAAAGTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LMEVPLPLTHRD*CCSSADVKSLA Trigger: AGCCAGACTTTTGACATCAGCTGAGGAACAGCAGCAATCCCTATGGGTCAGTGGTAAAGGCACCTCCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | TTTCTAGTCTGTGGGTGCTGGGATTGGAATCATGTCTaGAGACTTGATGGAGGTGCCTTTACCACTGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLVCGCWDWNHV*RLDGGAFTTDP Trigger: TGGGTCAGTGGTAAAGGCACCTCCATCAAGTCTGCAGACATGATTCCAATCCCAGCACCCACAGACTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | CTGCTTGCCTTAAGACCCAATGACAGCAACATCAACTaGAGTCCAACTGGGACGGAATTCCCCTCACCAATA | + |
|
Preference number: 3 (lower is better) Translates to: LLALRPNDSNIN*SPTGTEFPSPI Trigger: TATTGGTGAGGGGAATTCCGTCCCAGTTGGACTCCAGTTGATGTTGCTGTCATTGGGTCTTAAGGCAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR TCA 72 bp | GCTGGCCCTGAAGGTACAAGGCAGCAAGTGACACTCTaGGTTCAAGGTTCAAAGAGAAGAAACAAAAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGPEGTRQQVTL*VQGSKRRNKSS Trigger: GCTGCTTTTGTTTCTTCTCTTTGAACCTTGAACTCAGAGTGTCACTTGCTGCCTTGTACCTTCAGGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | GGAGCCTCAGACTGCAATGATCAGTATGATCCAATATaGCTGTTCGAGGCATACATACTGCTCTCTCCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GASDCNDQYDPI*LFEAYILLSPD Trigger: ATCCGGAGAGAGCAGTATGTATGCCTCGAACAGCCATATTGGATCATACTGATCATTGCAGTCTGAGGCTCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAGGGATTGCTGCTGTTCCTCAGCTGATGTCAAAAGTCTGGCTTACAAATACCTGATGGTTGGGGACTaGATTCCTAGACTGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HRDCCCSSADVKSLAYKYLMVGD*IPRLLA Trigger: GGCAAGCAGTCTAGGAATCAAGTCCCCAACCATCAG...GTATTTGTAAGCCAGACTTTTGACATCAGCTGAGGAACAGCAGCAATCCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATCTGATGGTTGGGGACTaGATTCCTAGACTGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TEVRSSGLVTCAFTFVSHLMVGD*IPRLLA Trigger: GGCAAGCAGTCTAGGAATCAAGTCCCCAACCATCAG...ATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTGACTTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR TCA 72 bp | GTGTGTTTATGTGTGTGGACACGTGCAGACAACTTGTaGGAAACCGTTATCTTTCTAGTCTGTGGGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VCLCVWTRADNL*ETVIFLVCGCW Trigger: CCAGCACCCACAGACTAGAAAGATAACGGTTTCTCACAAGTTGTCTGCACGTGTCCACACACATAAACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | GGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTaGTTTCACATTTGTAAGTCATCCAATAAGCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GDGSQVFRFGDM*FHICKSSNKPC Trigger: ACAGGGCTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTGACTTCCGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | GCACACCATGGCATGTTTGTGCTGGTCATGACAACTTaGAGATGTTGTTTTTCACCTTCCACTTTGTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AHHGMFVLVMTT*RCCFSPSTLWV Trigger: GACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCATGACCAGCACAAACATGCCATGGTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | ACTGGAGTTAAGGGTAGTTATGAATCACCACATGGGTaGTGGGAATTAAACCGGGTCCTGTTTTCCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGVKGSYESPHG*WELNRVLFSSA Trigger: AGCACTGGAAAACAGGACCCGGTTTAATTCCCAGCACCCATGTGGTGATTCATAACTACCCTTAACTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CCA 72 bp | GAAACCGTTATCTTTCTAGTCTGTGGGTGCTGGGATTaGAATCATGTCTGCAGACTTGATGGAGGTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ETVIFLVCGCWD*NHVCRLDGGAF Trigger: AAAGGCACCTCCATCAAGTCTGCAGACATGATTCCAATCCCAGCACCCACAGACTAGAAAGATAACGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR TCA 72 bp | GAGTGCATGCACACCATGGCATGTTTGTGCTGGTCATaGCAACTTGCAGATGTTGTTTTTCACCTTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: ECMHTMACLCWS*QLADVVFHLPL Trigger: AAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCATGACCAGCACAAACATGCCATGGTGTGCATGCACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR GCA 72 bp | AGTTTTCACACTTTATTTTGCACAGGTGTGAGTGCATaGACACCATGGCATGTTTGTGCTGGTCATGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFHTLFCTGVSA*TPWHVCAGHDN Trigger: GTTGTCATGACCAGCACAAACATGCCATGGTGTGCATGCACTCACACCTGTGCAAAATAAAGTGTGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGGCATGTATTTATATGCACCACCAGAGTGCCTGGGATCCTGAAATCAGAGACAACTTGCAGATGTaGTTTTTCACCTTCCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LWACIYMHHQSAWDPEIRDNLQM*FFTFHF Trigger: AAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTC...TCTGATTTCAGGATCCCAGGCACTCTGGTGGTGCATATAAATACATGCCCACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR TCA 72 bp | ATCACTTTAGTTTTCACACTTTATTTTGCACAGGTGTaGGTGCATGCACACCATGGCATGTTTGTGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ITLVFTLYFAQV*VHAHHGMFVLV Trigger: GACCAGCACAAACATGCCATGGTGTGCATGCACTCACACCTGTGCAAAATAAAGTGTGAAAACTAAAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR CCA 90 bp | CCGAGAACAGCACTTGGAGGCTCTGAGTACGGAGGCGGATGGGTCCGAAGAGTGAGCAGGCGGGCGCCATaGCTCCCGGCCCTGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTALGGSEYGGGWVRRVSRRAP*LPALRG Trigger: ACCCCTCAGGGCCGGGAGCCATGGCGCCCGCCTGCT...CACTCTTCGGACCCATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGCATACATACTGCTCTCTCCGGATGGCTCACAGCAGCCTGGGGCTCCATTAGCAGGCGGGCGCCATaGCTCCCGGCCCTGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGIHTALSGWLTAAWGSISRRAP*LPALRG Trigger: ACCCCTCAGGGCCGGGAGCCATGGCGCCCGCCTGCT...AATGGAGCCCCAGGCTGCTGTGAGCCATCCGGAGAGAGCAGTATGTATGCCTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR GCA 90 bp | CATGCCCAGCAGGGTGTGGAGCATGTCGTGCACTTCACGGTACCTCTGGATCACTACGGGGCCGAAGACTaGGGTGGAGGCGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HAQQGVEHVVHFTVPLDHYGAED*GGGAGS Trigger: GCTCCCTGCGCCTCCACCGCAGTCTTCGGCCCCGTA...GTGATCCAGAGGTACCGTGAAGTGCACGACATGCTCCACACCCTGCTGGGCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS-3UTR CCA 90 bp | GCAACATCAACTGGAGTCCAACTGGGACGGAATTCCCCTCACCAATACCTCAGGAGCAGGCGGGCGCCATaGCTCCCGGCCCTGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATSTGVQLGRNSPHQYLRSRRAP*LPALRG Trigger: ACCCCTCAGGGCCGGGAGCCATGGCGCCCGCCTGCT...CCTGAGGTATTGGTGAGGGGAATTCCGTCCCAGTTGGACTCCAGTTGATGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAGGGAGCTAAGTCTAGGACAACCAGCAGACTCTAGGCCTGATGGGAGCTACGGGGCCGAAGACTaGGGTGGAGGCGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQRELSLGQPADSRPDGSYGAED*GGGAGS Trigger: GCTCCCTGCGCCTCCACCGCAGTCTTCGGCCCCGTA...GCTCCCATCAGGCCTAGAGTCTGCTGGTTGTCCTAGACTTAGCTCCCTTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGCCCTGCGCCCGTTCTGAATCGCCCAAGGGATCAGCTCCGAGAACAGCACGGGTGTGGCATCCTGTaGTCTCCCCTAGAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGPAPVLNRPRDQLREQHGCGIL*SPLELQ Trigger: TTGCAGTTCTAGGGGAGACCACAGGATGCCACACCC...GTGCTGTTCTCGGAGCTGATCCCTTGGGCGATTCAGAACGGGCGCAGGGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR CAA 72 bp | GGTTTGGTGGGGTCCAGTCTCTCTCATCCGAGCATGTaGGTGGGCATGCCCAGCAGGGTGTGGAGCATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLVGSSLSHPSM*VGMPSRVWSMS Trigger: CGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGATGAGAGAGACTGGACCCCACCAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143616.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGCCCTGCGCCCGTTCTGAATCGCCCAAGGGATCAGCTCCGAGAACAGCACTCTTCATCTGGTCCCTaGGGAATTTCAGGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGPAPVLNRPRDQLREQHSSSGP*GISGCG Trigger: GCCACACCCTGAAATTCCTCAGGGACCAGATGAAGA...GTGCTGTTCTCGGAGCTGATCCCTTGGGCGATTCAGAACGGGCGCAGGGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR CAA 72 bp | CTGAATCGCCCAAGGGATCAGCTCCGAGAACAGCACTaGGAGGCTCTGAGTACGGAGGCGGATGGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNRPRDQLREQH*EALSTEADGSE Trigger: TTCGGACCCATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGCTGATCCCTTGGGCGATTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS-3UTR CCA 90 bp | CGCCCAAGGGATCAGCTCCGAGAACAGCACTTGGAGGCTCTGAGTACGGAGGCGCGCTCTTGTAGAATCTaGGCACCCTCTGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPRDQLREQHLEALSTEARSCRI*APSGSF Trigger: GAAGGATCCAGAGGGTGCCCAGATTCTACAAGAGCG...CGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGCTGATCCCTTGGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCGAGAACAGCACTTGGAGGCTCTGAGTACGGAGGCGGATGGGTCCGAAGACGCTCTTGTAGAATCTaGGCACCCTCTGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APRTALGGSEYGGGWVRRRSCRI*APSGSF Trigger: GAAGGATCCAGAGGGTGCCCAGATTCTACAAGAGCG...TCTTCGGACCCATCCGCCTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAAGGGAGCTAAGTCTAGGACAACCAGCAGACTCTAGGCCTGATGGGAGCGAGTACGGAGGCGGATaGGTCCGAAGAGTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQRELSLGQPADSRPDGSEYGGG*VRRVLP Trigger: TGGGAGCACTCTTCGGACCCATCCGCCTCCGTACTC...GCTCCCATCAGGCCTAGAGTCTGCTGGTTGTCCTAGACTTAGCTCCCTTTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| 3UTR CAA 72 bp | GGCGGATGGGTCCGAAGAGTGCTCCCAGGATGCACATaGGTAGGCCGGTCTGCACAGCCTCAAACCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GGWVRRVLPGCT*VGRSAQPQTTL Trigger: TAAAGTGGTTTGAGGCTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAGCACTCTTCGGACCCATCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| 3UTR CAA 72 bp | GCCTCAAACCACTTTACCACAACCTCTCCGAGCATGTaGGTGGGCATGCCCAGCAGGGTGTGGAGCATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASNHFTTTSPSM*VGMPSRVWSMS Trigger: CGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGTTGTGGTAAAGTGGTTTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGCTTTATTCAGACACCAGAGACGCCTTCTCCTCCCCACCAGTCTGCTCAGATGCCCAGCAGGGTGTaGAGCATGTCGTGCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSFIQTPETPSPPHQSAQMPSRV*SMSCTS Trigger: TGAAGTGCACGACATGCTCCACACCCTGCTGGGCAT...CTGAGCAGACTGGTGGGGAGGAGAAGGCGTCTCTGGTGTCTGAATAAAGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGCATGTATTTATATGCACCACCAGAGTGCCTGGGATCCTGAAATCAGATACGGGGCCGAAGACTaGGGTGGAGGCGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWACIYMHHQSAWDPEIRYGAED*GGGAGS Trigger: GCTCCCTGCGCCTCCACCGCAGTCTTCGGCCCCGTA...TCTGATTTCAGGATCCCAGGCACTCTGGTGGTGCATATAAATACATGCCCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGCATACATACTGCTCTCTCCGGATGGCTCACAGCAGCCTGGGGCTCCATTATTGGTAGGCCGGTCTaGACAGCCTCAAACCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGIHTALSGWLTAAWGSIIGRPV*TASNHF Trigger: AAAGTGGTTTGAGGCTGTGCAGACCGGCCTACCAAT...AATGGAGCCCCAGGCTGCTGTGAGCCATCCGGAGAGAGCAGTATGTATGCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTCAGACACCAGAGACGCCTTCTCCTCCCCACCAGTCTGCTCAGGGCTTGGGGTGTGGCATCCTGTaGTCTCCCCTAGAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FIQTPETPSPPHQSAQGLGCGIL*SPLELQ Trigger: TTGCAGTTCTAGGGGAGACCACAGGATGCCACACCC...CAAGCCCTGAGCAGACTGGTGGGGAGGAGAAGGCGTCTCTGGTGTCTGAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR TCA 90 bp | TCAAACCACTTTACCACAACCTCTCCGAGCATGTTGGTGGGCATGCCCAGCAGGTCTTCATCTGGTCCCTaGGGAATTTCAGGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNHFTTTSPSMLVGMPSRSSSGP*GISGCG Trigger: GCCACACCCTGAAATTCCTCAGGGACCAGATGAAGA...CCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGTTGTGGTAAAGTGGTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176348.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGTTGTTTTTCACCTTCCACTTTGTGGGTCTTGGGGACGGAAGTCAGGTCCCTTCAGGCAGGCTCTaGAGCTTGCTCAGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QMLFFTFHFVGLGDGSQVPSGRL*SLLRSR Trigger: CCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGG...GACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGGTGAAAAACAACATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGGTGTGGAGCATGTCGTGCACTTCACGGTACCTCTGGATCACATAGGAATCTGGGCACCCTCTaGATCCTTCTTCATCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PAGCGACRALHGTSGSHRNLGTL*ILLHLV Trigger: GACCAGATGAAGAAGGATCCAGAGGGTGCCCAGATT...CCTATGTGATCCAGAGGTACCGTGAAGTGCACGACATGCTCCACACCCTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTTCTGATGGTTGGGGACTTGATTCCTAGACTGCTTGCCTTAAGACCCAATGGACACATGGGGCCCTaGGCCCGTTCTGAATCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLMVGDLIPRLLALRPNGHMGP*ARSESP Trigger: GGGCGATTCAGAACGGGCGCAGGGCCCCATGTGTCC...ATTGGGTCTTAAGGCAAGCAGTCTAGGAATCAAGTCCCCAACCATCAGAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| CDS-3UTR CCA 90 bp | ACGCTGCTCATAGTAGATGTTGAGGACACATGGGGCCCTGCGCCCGTTCTGAATAATCTGGGCACCCTCTaGATCCTTCTTCATCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLIVDVEDTWGPAPVLNNLGTL*ILLHLV Trigger: GACCAGATGAAGAAGGATCCAGAGGGTGCCCAGATT...ATTCAGAACGGGCGCAGGGCCCCATGTGTCCTCAACATCTACTATGAGCAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCTAGAACTGGAGTTAAGGGTAGTTATGAATCACCACATGGGTGCTGGGAACTCCGAGCATGTTGGTaGGCATGCCCAGCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRTGVKGSYESPHGCWELRACW*ACPAGC Trigger: ACACCCTGCTGGGCATGCCCACCAACATGCTCGGAG...TTCCCAGCACCCATGTGGTGATTCATAACTACCCTTAACTCCAGTTCTAGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| CDS-3UTR TCA 90 bp | TCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATCCAATAAGCCCTGTTGCCCTGCGCCCGTTCTaGATCGCCCAAGGGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLVTCAFTFVSHPISPVALRPF*IAQGIS Trigger: GCTGATCCCTTGGGCGATTCAGAACGGGCGCAGGGC...AACAGGGCTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| CDS-3UTR TCA 90 bp | ATAGGGATTGCTGCTGTTCCTCAGCTGATGTCAAAAGTCTGGCTTACAAATACACCTTCAGGCAGGCTCTaGAGCTTGCTCAGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGIAAVPQLMSKVWLTNTPSGRL*SLLRSR Trigger: CCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGG...TGTATTTGTAAGCCAGACTTTTGACATCAGCTGAGGAACAGCAGCAATCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR TCA 90 bp | ATGAACATTTTGTGGGCATGTATTTATATGCACCACCAGAGTGCCTGGGATCCTGCTCATAGTAGATGTTaGGGACACATGGGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MNILWACIYMHHQSAWDPAHSRC*GHMGPC Trigger: GCAGGGCCCCATGTGTCCTCAACATCTACTATGAGC...AGGATCCCAGGCACTCTGGTGGTGCATATAAATACATGCCCACAAAATGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| CDS-3UTR GCA 90 bp | AGAAACCGTTATCTTTCTAGTCTGTGGGTGCTGGGATTGGAATCATGTCTGCAGCACAAAGCGTGTAGGTaGTCGTGTGTCTGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RNRYLSSLWVLGLESCLQHKACR*SCVWRD Trigger: GTCTCTCCAGACACACGAGCACCTACACGCTTTGTG...CTGCAGACATGATTCCAATCCCAGCACCCACAGACTAGAAAGATAACGGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCGTTATCTTTCTAGTCTGTGGGTGCTGGGATTGGAATCATGTCTGCAGCGCTCTTGTAGAATCTaGGCACCCTCTGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNRYLSSLWVLGLESCLQRSCRI*APSGSF Trigger: GAAGGATCCAGAGGGTGCCCAGATTCTACAAGAGCG...CTGCAGACATGATTCCAATCCCAGCACCCACAGACTAGAAAGATAACGGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTCTTCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATCCAATAAGGATGTTGAGGACACATaGGGCCCTGCGCCCGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVFRFGDMCFHICKSSNKDVEDT*GPAPVL Trigger: CAGAACGGGCGCAGGGCCCCATGTGTCCTCAACATC...CTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
||
| 3UTR CAA 72 bp | TGCAGATGTTGTTTTTCACCTTCCACTTTGTGGGTCTaGGGGACGGAAGTCAGGTCTTCAGGTTTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CRCCFSPSTLWV*GTEVRSSGLVT Trigger: TGTCACCAAACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGGTGAAAAACAACATCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CAA 72 bp | ATGACAACTTGCAGATGTTGTTTTTCACCTTCCACTTaGTGGGTCTTGGGGACGGAAGTCAGGTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MTTCRCCFSPST*WVLGTEVRSSG Trigger: ACCTGAAGACCTGACTTCCGTCCCCAAGACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CAA 72 bp | TGGCATGTTTGTGCTGGTCATGACAACTTGCAGATGTaGTTTTTCACCTTCCACTTTGTGGGTCTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WHVCAGHDNLQM*FFTFHFVGLGD Trigger: GTCCCCAAGACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCATGACCAGCACAAACATGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTCTTCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATCCAATAAGTCTTCATCTGGTCCCTaGGGAATTTCAGGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVFRFGDMCFHICKSSNKSSSGP*GISGCG Trigger: GCCACACCCTGAAATTCCTCAGGGACCAGATGAAGA...CTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATCCAATAAGCCCTGTTCACAAAGCGTGTAGGTaGTCGTGTGTCTGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLVTCAFTFVSHPISPVHKACR*SCVWRD Trigger: GTCTCTCCAGACACACGAGCACCTACACGCTTTGTG...AACAGGGCTTATTGGATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS-3UTR CCA 90 bp | ACGGAAGTCAGGTCTTCAGGTTTGGTGACATGTGCTTTCACATTTGTAAGTCATAATCTGGGCACCCTCTaGATCCTTCTTCATCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TEVRSSGLVTCAFTFVSHNLGTL*ILLHLV Trigger: GACCAGATGAAGAAGGATCCAGAGGGTGCCCAGATT...ATGACTTACAAATGTGAAAGCACATGTCACCAAACCTGAAGACCTGACTTCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CAA 72 bp | TGCACACCATGGCATGTTTGTGCTGGTCATGACAACTaGCAGATGTTGTTTTTCACCTTCCACTTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTPWHVCAGHDN*QMLFFTFHFVG Trigger: ACCCACAAAGTGGAAGGTGAAAAACAACATCTGCAAGTTGTCATGACCAGCACAAACATGCCATGGTGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| 3UTR CAA 72 bp | TACAAGGGACTTGTTAGTTTTCTGATGGTTGGGGACTaGATTCCTAGACTGCTTGCCTTAAGACCCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKGLVSFLMVGD*IPRLLALRPND Trigger: GTCATTGGGTCTTAAGGCAAGCAGTCTAGGAATCAAGTCCCCAACCATCAGAAAACTAACAAGTCCCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
||
| CDS CCA 90 bp | AGCGGGGTGGTTGGGATGTGGTCCGGGTACAGCAGGCGGGCGCCATaGCTCCCGGCCCTGAGGGGTACATCTACAGCTGGCCGCGTACGG | + |
|
Preference number: 5 (lower is better) Translates to: SGVVGMWSGYSRRAP*LPALRGTSTAGRVR Trigger: CCGTACGCGGCCAGCTGTAGATGTACCCCTCAGGGCCGGGAGCCATGGCGCCCGCCTGCTGTACCCGGACCACATCCCAACCACCCCGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
||
| CDS TCA 90 bp | GTGTGTCTGGAGAGACCTTGGCCCAGTGAGCCTTCAGGCAGGCTCTaGAGCTTGCTCAGGTCGAGGGTAGACAGGGAGATCCTGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: VCLERPWPSEPSGRL*SLLRSRVDREILGR Trigger: GCGTCCCAGGATCTCCCTGTCTACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCAAGGTCTCTCCAGACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
||
| CDS TCA 90 bp | AGGAAGCGAAGATACTCACGGCCCAGTGAGCCTTCAGGCAGGCTCTaGAGCTTGCTCAGGTCGAGGGTAGACAGGGAGATCCTGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: RKRRYSRPSEPSGRL*SLLRSRVDREILGR Trigger: GCGTCCCAGGATCTCCCTGTCTACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCGTGAGTATCTTCGCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000148791.2 |
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| CDS-3UTR CAA 90 bp | GTAGATGTTGAGGACACATGGGGCCCTGCGCCCGTTCTGAATCGCCCAAGGGATTTTGCAGCGGGGTGGTaGGGATGTGGTCCGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: VDVEDTWGPAPVLNRPRDFAAGW*GCGPGT Trigger: TGTACCCGGACCACATCCCAACCACCCCGCTGCAAA...ATCCCTTGGGCGATTCAGAACGGGCGCAGGGCCCCATGTGTCCTCAACATCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| CDS TCA 90 bp | ACAAAGCGTGTAGGTGCTCGTGTGTCTGGAGAGACCTTGGCCCAGTaGGCCTTCAGGCAGGCTCTGAAGCTTGCTCAGGTCGAGGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TKRVGARVSGETLAQ*AFRQALKLAQVEGR Trigger: TCTACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCAAGGTCTCTCCAGACACACGAGCACCTACACGCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| CDS CCA 90 bp | GGACGCTCTTGTAGAATCTGGGCACCCTCTGGATCCTTCTTCATCTaGTCCCTGAGGAATTTCAGGGTGTGGCATCCTGTGGTCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GRSCRIWAPSGSFFI*SLRNFRVWHPVVSP Trigger: AGGGGAGACCACAGGATGCCACACCCTGAAATTCCTCAGGGACCAGATGAAGAAGGATCCAGAGGGTGCCCAGATTCTACAAGAGCGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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| CDS TCA 90 bp | AGAGACCTTATTCACATCCAGGAAGCGAAGATACTCACGGCCCAGTaGGCCTTCAGGCAGGCTCTGAAGCTTGCTCAGGTCGAGGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: RDLIHIQEAKILTAQ*AFRQALKLAQVEGR Trigger: TCTACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCGTGAGTATCTTCGCTTCCTGGATGTGAATAAGGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
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| CDS TCA 90 bp | CTTGTAGAATCTGGGCACCCTCTGGATCCTTCTTCATCTGGTCCCTaGGGAATTTCAGGGTGTGGCATCCTGTGGTCTCCCCTAGAACTG | + |
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Preference number: 5 (lower is better) Translates to: LVESGHPLDPSSSGP*GISGCGILWSPLEL Trigger: CAGTTCTAGGGGAGACCACAGGATGCCACACCCTGAAATTCCTCAGGGACCAGATGAAGAAGGATCCAGAGGGTGCCCAGATTCTACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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| CDS-3UTR CAA 90 bp | GGTCCTAGAACTGGAGTTAAGGGTAGTTATGAATCACCACATGGGTGCTGGGAATTTGCAGCGGGGTGGTaGGGATGTGGTCCGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: GPRTGVKGSYESPHGCWEFAAGW*GCGPGT Trigger: TGTACCCGGACCACATCCCAACCACCCCGCTGCAAA...TTCCCAGCACCCATGTGGTGATTCATAACTACCCTTAACTCCAGTTCTAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| CDS-3UTR CAA 90 bp | CCTGTTTTCCAGTGCTTAGCTGCTGAGACATCTCCCCAAACCATCACTTTAGTTACCTCTCCGAGCATGTaGGTGGGCATGCCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PVFQCLAAETSPQTITLVTSPSM*VGMPSR Trigger: CCTGCTGGGCATGCCCACCAACATGCTCGGAGAGGT...AACTAAAGTGATGGTTTGGGGAGATGTCTCAGCAGCTAAGCACTGGAAAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
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| CDS-3UTR CAA 90 bp | GCATTAGGTCCTAGAACTGGAGTTAAGGGTAGTTATGAATCACCACATGGGTGCTTTGCAGCGGGGTGGTaGGGATGTGGTCCGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: ALGPRTGVKGSYESPHGCFAAGW*GCGPGT Trigger: TGTACCCGGACCACATCCCAACCACCCCGCTGCAAA...GCACCCATGTGGTGATTCATAACTACCCTTAACTCCAGTTCTAGGACCTAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 |
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| CDS-3UTR CAA 90 bp | AGAAACCGTTATCTTTCTAGTCTGTGGGTGCTGGGATTGGAATCATGTCTGCAGCTCCCAGGATGCACATaGGTAGGCCGGTCTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: RNRYLSSLWVLGLESCLQLPGCT*VGRSAQ Trigger: CTGTGCAGACCGGCCTACCAATGTGCATCCTGGGAG...CTGCAGACATGATTCCAATCCCAGCACCCACAGACTAGAAAGATAACGGTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
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| CDS-3UTR CAA 90 bp | TGTGTTTATGTGTGTGGACACGTGCAGACAACTTGTGAGAAACCGTTATCTTTCCTCCGAGAACAGCACTaGGAGGCTCTGAGTACGGAG | + |
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Preference number: 5 (lower is better) Translates to: CVYVCGHVQTTCEKPLSFLREQH*EALSTE Trigger: CTCCGTACTCAGAGCCTCCAAGTGCTGTTCTCGGAG...GAAAGATAACGGTTTCTCACAAGTTGTCTGCACGTGTCCACACACATAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028137.10 |
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| CDS GCA 72 bp | GCCATTCCCGCCGCGCCCGCAGCCAGCAGCATCTTTTaGAGCGGGGTGGTTGGGATGTGGTCCGGGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: AIPAAPAASSIF*SGVVGMWSGYS Trigger: GCTGTACCCGGACCACATCCCAACCACCCCGCTGCAAAAGATGCTGCTGGCTGCGGGCGCGGCGGGAATGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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| CDS CCA 72 bp | GTTGGGATGTGGTCCGGGTACAGCAGGCGGGCGCCATaGCTCCCGGCCCTGAGGGGTACATCTACAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VGMWSGYSRRAP*LPALRGTSTAG Trigger: GCCAGCTGTAGATGTACCCCTCAGGGCCGGGAGCCATGGCGCCCGCCTGCTGTACCCGGACCACATCCCAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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| CDS CAA 72 bp | CGCCCGCAGCCAGCAGCATCTTTTGCAGCGGGGTGGTaGGGATGTGGTCCGGGTACAGCAGGCGGGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RPQPAASFAAGW*GCGPGTAGGRH Trigger: ATGGCGCCCGCCTGCTGTACCCGGACCACATCCCAACCACCCCGCTGCAAAAGATGCTGCTGGCTGCGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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| CDS CAA 72 bp | AGCCATTCCCGCCGCGCCCGCAGCCAGCAGCATCTTTaGCAGCGGGGTGGTTGGGATGTGGTCCGGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: SHSRRARSQQHL*QRGGWDVVRVQ Trigger: CTGTACCCGGACCACATCCCAACCACCCCGCTGCAAAAGATGCTGCTGGCTGCGGGCGCGGCGGGAATGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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| CDS TCA 72 bp | GAGAGACCTTGGCCCAGTGAGCCTTCAGGCAGGCTCTaGAGCTTGCTCAGGTCGAGGGTAGACAGGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: ERPWPSEPSGRL*SLLRSRVDREI Trigger: GATCTCCCTGTCTACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCAAGGTCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| CDS TCA 72 bp | GTAGGTGCTCGTGTGTCTGGAGAGACCTTGGCCCAGTaGGCCTTCAGGCAGGCTCTGAAGCTTGCTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VGARVSGETLAQ*AFRQALKLAQV Trigger: GACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCAAGGTCTCTCCAGACACACGAGCACCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143616.8 ENSMUST00000176348.8 |
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| CDS TCA 72 bp | AGATACTCACGGCCCAGTGAGCCTTCAGGCAGGCTCTaGAGCTTGCTCAGGTCGAGGGTAGACAGGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: RYSRPSEPSGRL*SLLRSRVDREI Trigger: GATCTCCCTGTCTACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCGTGAGTATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000148791.2 |
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| CDS TCA 72 bp | ATTCACATCCAGGAAGCGAAGATACTCACGGCCCAGTaGGCCTTCAGGCAGGCTCTGAAGCTTGCTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: IHIQEAKILTAQ*AFRQALKLAQV Trigger: GACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCGTGAGTATCTTCGCTTCCTGGATGTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028137.10 ENSMUST00000148791.2 |
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| CDS CCA 72 bp | GTAGACAGGGAGATCCTGGGACGCTCTTGTAGAATCTaGGCACCCTCTGGATCCTTCTTCATCTGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: VDREILGRSCRI*APSGSFFIWSL Trigger: CAGGGACCAGATGAAGAAGGATCCAGAGGGTGCCCAGATTCTACAAGAGCGTCCCAGGATCTCCCTGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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| CDS CCA 72 bp | TGTAGAATCTGGGCACCCTCTGGATCCTTCTTCATCTaGTCCCTGAGGAATTTCAGGGTGTGGCATCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CRIWAPSGSFFI*SLRNFRVWHPV Trigger: CACAGGATGCCACACCCTGAAATTCCTCAGGGACCAGATGAAGAAGGATCCAGAGGGTGCCCAGATTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028137.10 ENSMUST00000143616.8 ENSMUST00000148791.2 ENSMUST00000176348.8 |
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