Pregenerated sensors for COQ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029319Ensembl transcript IDs: ENSMUST00000031262.9, ENSMUST00000126981.2, ENSMUST00000135146.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCGCAGCCACAGCAGCGTAGTAGGGGACAGTCTGACCATTGTTaGCTCCCGCCAGGCTCAGCGCTGCCACCATGGCGACCCCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PPQPQQRSRGQSDHC*LPPGSALPPWRPQS Trigger: GCTTTGGGGTCGCCATGGTGGCAGCGCTGAGCCTGGCGGGAGCCAACAATGGTCAGACTGTCCCCTACTACGCTGCTGTGGCTGCGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 90 bp | AGGCTCAGCGCTGCCACCATGGCGACCCCAAAGCCACTAAGCCACTaGCTTGTGTTCTCCTGGAACAGCAGTGCTGTGGACTTCAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: RLSAATMATPKPLSH*LVFSWNSSAVDFRP Trigger: CGGCCTGAAGTCCACAGCACTGCTGTTCCAGGAGAACACAAGGCAGTGGCTTAGTGGCTTTGGGGTCGCCATGGTGGCAGCGCTGAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 90 bp | GTAGGGGACAGTCTGACCATTGTTGGCTCCCGCCAGGCTCAGCGCTaGCACCATGGCGACCCCAAAGCCACTAAGCCACTGCCTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: VGDSLTIVGSRQAQR*HHGDPKATKPLPCV Trigger: AACACAAGGCAGTGGCTTAGTGGCTTTGGGGTCGCCATGGTGGCAGCGCTGAGCCTGGCGGGAGCCAACAATGGTCAGACTGTCCCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR CCA 90 bp | AGGTTGCAGAATGCTAACACAGGGGCCTACCCAACCCCAGGTCCCTaGGACAGGTGCTGTGACAGGGAGCTGGTTGAAAGCAGCTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: RLQNANTGAYPTPGP*DRCCDRELVESSCS Trigger: ACTGCAGCTGCTTTCAACCAGCTCCCTGTCACAGCACCTGTCCCAGGGACCTGGGGTTGGGTAGGCCCCTGTGTTAGCATTCTGCAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR GCA 90 bp | AATGCTAACACAGGGGCCTACCCAACCCCAGGTCCCTGGGACAGGTaGTGTGACAGGGAGCTGGTTGAAAGCAGCTGCAGTAAAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: NANTGAYPTPGPWDR*CDRELVESSCSKVQ Trigger: CTGGACTTTACTGCAGCTGCTTTCAACCAGCTCCCTGTCACAGCACCTGTCCCAGGGACCTGGGGTTGGGTAGGCCCCTGTGTTAGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR CCA 90 bp | ACCATGGCGACCCCAAAGCCACTAAGCCACTGCCTTGTGTTCTCCTaGAACAGCAGTGCTGTGGACTTCAGGCCGATCAGAGCATCGTCT | + |
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Preference number: 1 (lower is better) Translates to: TMATPKPLSHCLVFS*NSSAVDFRPIRASS Trigger: AGACGATGCTCTGATCGGCCTGAAGTCCACAGCACTGCTGTTCCAGGAGAACACAAGGCAGTGGCTTAGTGGCTTTGGGGTCGCCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 90 bp | CCCAAAGCCACTAAGCCACTGCCTTGTGTTCTCCTGGAACAGCAGTaGTGTGGACTTCAGGCCGATCAGAGCATCGTCTTTCTTGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PKATKPLPCVLLEQQ*CGLQADQSIVFLVL Trigger: CAGGACAAGAAAGACGATGCTCTGATCGGCCTGAAGTCCACAGCACTGCTGTTCCAGGAGAACACAAGGCAGTGGCTTAGTGGCTTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR TCA 90 bp | GGACAATCCCTAAGAACAGGAGCATTCCTACTGTGCGGTTGGAGGTaGACTTGTCCCAGCAGTCCTCGGCTCTGTGGATGTCTACAGTGT | + |
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Preference number: 1 (lower is better) Translates to: GQSLRTGAFLLCGWR*TCPSSPRLCGCLQC Trigger: ACACTGTAGACATCCACAGAGCCGAGGACTGCTGGGACAAGTTCACCTCCAACCGCACAGTAGGAATGCTCCTGTTCTTAGGGATTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 90 bp | TCAGCTCGTCTGCTCACTTCCCACTCTAACAGCTTCAGCATCTTTTaGTTCTTCCGTCTTTTCTTTGCACAGGTTTCCAAGGACAATCCC | + |
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Preference number: 1 (lower is better) Translates to: SARLLTSHSNSFSIF*FFRLFFAQVSKDNP Trigger: GGGATTGTCCTTGGAAACCTGTGCAAAGAAAAGACGGAAGAAGCAAAAGATGCTGAAGCTGTTAGAGTGGGAAGTGAGCAGACGAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 90 bp | AGTCCAGTACACGCTGCCCGAGTGCTTCTTACTTCTTTAACAGATTaGTCATCCAAGCCTAACAATGTAGTCTTAAGCCCTGAAAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: SPVHAARVLLTSLTD*SSKPNNVVLSPESC Trigger: ACAACTTTCAGGGCTTAAGACTACATTGTTAGGCTTGGATGAGCAATCTGTTAAAGAAGTAAGAAGCACTCGGGCAGCGTGTACTGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR CAA 90 bp | ACCCAACCCCAGGTCCCTGGGACAGGTGCTGTGACAGGGAGCTGGTaGAAAGCAGCTGCAGTAAAGTCCAGTACACGCTGCCCGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: TQPQVPGTGAVTGSW*KAAAVKSSTRCPSA Trigger: AGCACTCGGGCAGCGTGTACTGGACTTTACTGCAGCTGCTTTCAACCAGCTCCCTGTCACAGCACCTGTCCCAGGGACCTGGGGTTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGCGGTTGGAGGTGAACTTGTCCCAGCAGTCCTCGGCTCTGTGGATGTCTACACCTCACAGTTTTCCTaGCTCTGCTTCCTGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: CAVGGELVPAVLGSVDVYTSQFS*LCFLRG Trigger: GCCCCTCAGGAAGCAGAGGCAGGAAAACTGTGAGGT...GTAGACATCCACAGAGCCGAGGACTGCTGGGACAAGTTCACCTCCAACCGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR CAA 90 bp | CTGAAGCTCCTGAAACTTTGGATGAGAAGGAACAAGGACAGAAGGTaGCAGAATGCTAACACAGGGGCCTACCCAACCCCAGGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LKLLKLWMRRNKDRR*QNANTGAYPTPGPW Trigger: CCAGGGACCTGGGGTTGGGTAGGCCCCTGTGTTAGCATTCTGCAACCTTCTGTCCTTGTTCCTTCTCATCCAAAGTTTCAGGAGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTAAGAACAGGAGCATTCCTACTGTGCGGTTGGAGGTGAACTTGTCCCAGGATCACAGGAGCCCTTaGCAGCAGACCATCCGAGTA | + |
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Preference number: 2 (lower is better) Translates to: IPKNRSIPTVRLEVNLSQDHRSP*QQTIRV Trigger: TACTCGGATGGTCTGCTGTCAAGGGCTCCTGTGATC...CTGGGACAAGTTCACCTCCAACCGCACAGTAGGAATGCTCCTGTTCTTAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR CAA 90 bp | TTTCCAAGGACAATCCCTAAGAACAGGAGCATTCCTACTGTGCGGTaGGAGGTGAACTTGTCCCAGCAGTCCTCGGCTCTGTGGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: FPRTIPKNRSIPTVR*EVNLSQQSSALWMS Trigger: AGACATCCACAGAGCCGAGGACTGCTGGGACAAGTTCACCTCCAACCGCACAGTAGGAATGCTCCTGTTCTTAGGGATTGTCCTTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCAAGGACAATCCCTAAGAACAGGAGCATTCCTACTGTGCGGTTGGAGGTCACTAGTGGGTAGGTaGCGACAAGAAGTAAGGACG | + |
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Preference number: 2 (lower is better) Translates to: GFQGQSLRTGAFLLCGWRSLVGR*RQEVRT Trigger: CGTCCTTACTTCTTGTCGTCACCTACCCACTAGTGA...CCTCCAACCGCACAGTAGGAATGCTCCTGTTCTTAGGGATTGTCCTTGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATGAGAAGGAGCCTTGGGCACACTaGATGGTGCCCACACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LDELCKLFPEAPETLDEKEPWAH*MVPTLP Trigger: GGGAAGTGTGGGCACCATGCAGTGTGCCCAAGGCTC...CTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGACAGCAGACCATCCGAGTAACGCACCCCAATTAAAAGTCAATCCCAAAACTGAGGCCAAAACGTaGTTCTTTTCACTAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PLTADHPSNAPQLKVNPKTEAKT*FFSLVG Trigger: ACCCACTAGTGAAAAGAATCACGTTTTGGCCTCAGT...TTTGGGATTGACTTTTAATTGGGGTGCGTTACTCGGATGGTCTGCTGTCAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR-3UTR CCA 90 bp | AACATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTGAATTACAGCTTTGGCCAACCCCAGGTCCCTaGGACAGGTGCTGTGACAGG | + |
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Preference number: 2 (lower is better) Translates to: NILLKHLESEWLLELQLWPTPGP*DRCCDR Trigger: CCTGTCACAGCACCTGTCCCAGGGACCTGGGGTTGG...CCAAAGCTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGCCTAACAATGTAGTCTTAAGCCCTGAAAGTTGTACAAATGAGTTTATTACCTCACAGTTTTCCTaGCTCTGCTTCCTGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SKPNNVVLSPESCTNEFITSQFS*LCFLRG Trigger: GCCCCTCAGGAAGCAGAGGCAGGAAAACTGTGAGGT...AATAAACTCATTTGTACAACTTTCAGGGCTTAAGACTACATTGTTAGGCTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCAACATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTGAATTACAGAAGCTCCTGAAACTTTaGATGAGAAGGAACAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: FANILLKHLESEWLLELQKLLKL*MRRNKD Trigger: GTCCTTGTTCCTTCTCATCCAAAGTTTCAGGAGCTT...CTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGATGTTGGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCAACATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTGAATTACAGCCATTAGATGAGTTATaGAAGTTGTTTCCTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: FANILLKHLESEWLLELQPLDEL*KLFPEA Trigger: AGCTTCAGGAAACAACTTGCATAACTCATCTAATGG...CTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGATGTTGGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR CCA 72 bp | CCACAGCAGCGTAGTAGGGGACAGTCTGACCATTGTTaGCTCCCGCCAGGCTCAGCGCTGCCACCATGGCGA | + |
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Preference number: 3 (lower is better) Translates to: PQQRSRGQSDHC*LPPGSALPPWR Trigger: TCGCCATGGTGGCAGCGCTGAGCCTGGCGGGAGCCAACAATGGTCAGACTGTCCCCTACTACGCTGCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 72 bp | GCTGCCACCATGGCGACCCCAAAGCCACTAAGCCACTaGCTTGTGTTCTCCTGGAACAGCAGTGCTGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: AATMATPKPLSH*LVFSWNSSAVD Trigger: GTCCACAGCACTGCTGTTCCAGGAGAACACAAGGCAGTGGCTTAGTGGCTTTGGGGTCGCCATGGTGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR CCA 72 bp | CCCCAGGTCCCTGGGACAGGTGCTGTGACAGGGAGCTaGTTGAAAGCAGCTGCAGTAAAGTCCAGTACACGC | + |
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Preference number: 3 (lower is better) Translates to: PQVPGTGAVTGS*LKAAAVKSSTR Trigger: GCGTGTACTGGACTTTACTGCAGCTGCTTTCAACCAGCTCCCTGTCACAGCACCTGTCCCAGGGACCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR CAA 90 bp | CCGCAGCCACAGCAGCGTAGTAGGGGACAGTCTGACCATTGTTGGCTCCCGCCAAGGACGCTGCTCCCATaGCTATACTGTAGTAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: PQPQQRSRGQSDHCWLPPRTLLP*LYCSSL Trigger: TAAACTACTACAGTATAGCAATGGGAGCAGCGTCCT...TGGCGGGAGCCAACAATGGTCAGACTGTCCCCTACTACGCTGCTGTGGCTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR TCA 72 bp | CTAAGAACAGGAGCATTCCTACTGTGCGGTTGGAGGTaGACTTGTCCCAGCAGTCCTCGGCTCTGTGGATGT | + |
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Preference number: 3 (lower is better) Translates to: LRTGAFLLCGWR*TCPSSPRLCGC Trigger: ACATCCACAGAGCCGAGGACTGCTGGGACAAGTTCACCTCCAACCGCACAGTAGGAATGCTCCTGTTCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 72 bp | TGCCTCTGCTTCCTGAGGGGCCAAGCTCAGCTCGTCTaGTCACTTCCCACTCTAACAGCTTCAGCATCTTTT | + |
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Preference number: 3 (lower is better) Translates to: CLCFLRGQAQLV*SLPTLTASASF Trigger: AAAAGATGCTGAAGCTGTTAGAGTGGGAAGTGAGCAGACGAGCTGAGCTTGGCCCCTCAGGAAGCAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCGTCTGCTCACTTCCCACTCTAACAGCTTCAGCATCTTTTGCTTCTTCCGTGGATCACAGGAGCCCTaGACAGCAGACCATCCGAGT | + |
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Preference number: 3 (lower is better) Translates to: ARLLTSHSNSFSIFCFFRGSQEP*TADHPS Trigger: ACTCGGATGGTCTGCTGTCAAGGGCTCCTGTGATCC...ACGGAAGAAGCAAAAGATGCTGAAGCTGTTAGAGTGGGAAGTGAGCAGACGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 72 bp | ACTAAGCCACTGCCTTGTGTTCTCCTGGAACAGCAGTaGTGTGGACTTCAGGCCGATCAGAGCATCGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: TKPLPCVLLEQQ*CGLQADQSIVF Trigger: AAAGACGATGCTCTGATCGGCCTGAAGTCCACAGCACTGCTGTTCCAGGAGAACACAAGGCAGTGGCTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR GCA 72 bp | TGGTTGAAAGCAGCTGCAGTAAAGTCCAGTACACGCTaGCCGAGTGCTTCTTACTTCTTTAACAGATTGCTC | + |
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Preference number: 3 (lower is better) Translates to: WLKAAAVKSSTR*PSASYFFNRLL Trigger: GAGCAATCTGTTAAAGAAGTAAGAAGCACTCGGGCAGCGTGTACTGGACTTTACTGCAGCTGCTTTCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR GCA 72 bp | CACGCTGCCCGAGTGCTTCTTACTTCTTTAACAGATTaGTCATCCAAGCCTAACAATGTAGTCTTAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: HAARVLLTSLTD*SSKPNNVVLSP Trigger: AGGGCTTAAGACTACATTGTTAGGCTTGGATGAGCAATCTGTTAAAGAAGTAAGAAGCACTCGGGCAGCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR GCA 72 bp | CTGCTCACTTCCCACTCTAACAGCTTCAGCATCTTTTaGTTCTTCCGTCTTTTCTTTGCACAGGTTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LLTSHSNSFSIF*FFRLFFAQVSK Trigger: CTTGGAAACCTGTGCAAAGAAAAGACGGAAGAAGCAAAAGATGCTGAAGCTGTTAGAGTGGGAAGTGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCCATTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATGTGACAGGGAGCTGGTaGAAAGCAGCTGCAGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: KPLDELCKLFPEAPETLDVTGSW*KAAAVK Trigger: CTTTACTGCAGCTGCTTTCAACCAGCTCCCTGTCAC...ATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAATGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR GCA 72 bp | CAGCTTCAGCATCTTTTGCTTCTTCCGTCTTTTCTTTaGACAGGTTTCCAAGGACAATCCCTAAGAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: QLQHLLLLPSFL*TGFQGQSLRTG Trigger: TCCTGTTCTTAGGGATTGTCCTTGGAAACCTGTGCAAAGAAAAGACGGAAGAAGCAAAAGATGCTGAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR CCA 72 bp | AGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTaGATGAGAAGGAACAAGGACAGAAGGTTGCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SYASCFLKLLKL*MRRNKDRRLQN Trigger: ATTCTGCAACCTTCTGTCCTTGTTCCTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR TCA 72 bp | GAATCAGAATGGCTTCTTGAATTACAGCTTTGGCAGTaGGTACAGATCACAAGGAGATTCTTAGTGAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: ESEWLLELQLWQ*VQITRRFLVRN Trigger: ATTCCTCACTAAGAATCTCCTTGTGATCTGTACTCACTGCCAAAGCTGTAATTCAAGAAGCCATTCTGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR-3UTR CAA 90 bp | AACATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTGAATTACAGCTTTGGGAAGCTCCTGAAACTTaGGATGAGAAGGAACAAGGA | + |
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Preference number: 3 (lower is better) Translates to: NILLKHLESEWLLELQLWEAPET*DEKEQG Trigger: TCCTTGTTCCTTCTCATCCAAAGTTTCAGGAGCTTC...CCAAAGCTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR TCA 72 bp | CATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTaGATTACAGCTTTGGCAGTGAGTACAGATCACAAG | + |
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Preference number: 3 (lower is better) Translates to: HPSKTSRIRMAS*ITALAVSTDHK Trigger: CTTGTGATCTGTACTCACTGCCAAAGCTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| CDS-3UTR TCA 90 bp | CCGCAGCCACAGCAGCGTAGTAGGGGACAGTCTGACCATTGTTGGCTCCCGCCATGCTCCACGGGCTCCTaGGACAGTCAGGGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PQPQQRSRGQSDHCWLPPCSTGS*DSQGWH Trigger: GTGCCAGCCCTGACTGTCTCAGGAGCCCGTGGAGCA...TGGCGGGAGCCAACAATGGTCAGACTGTCCCCTACTACGCTGCTGTGGCTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| CDS-3UTR GCA 90 bp | GGACTTCAGGCCGATCAGAGCATCGTCTTTCTTGTCCTGGTGGGCATAGATAGTCGCGCCCGGAACCCCTaGGCTGCGCACCAGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GLQADQSIVFLVLVGIDSRARNP*AAHQGQ Trigger: TTGGCCCTGGTGCGCAGCGCAGGGGTTCCGGGCGCG...ACTATCTATGCCCACCAGGACAAGAAAGACGATGCTCTGATCGGCCTGAAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126981.2 |
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| CDS-3UTR GCA 90 bp | GGTTTCCAAGGACAATCCCTAAGAACAGGAGCATTCCTACTGTGCGGTTGGAGGCGCGCCCGGAACCCCTaGGCTGCGCACCAGGGCCAN | + |
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Preference number: 4 (lower is better) Translates to: GFQGQSLRTGAFLLCGWRRARNP*AAHQGX Trigger: NTGGCCCTGGTGCGCAGCGCAGGGGTTCCGGGCGCG...CCTCCAACCGCACAGTAGGAATGCTCCTGTTCTTAGGGATTGTCCTTGGAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| CDS-3UTR GCA 90 bp | TCCAGTACACGCTGCCCGAGTGCTTCTTACTTCTTTAACAGATTGCTCATCCAACGCGCCCGGAACCCCTaGGCTGCGCACCAGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SSTRCPSASYFFNRLLIQRARNP*AAHQGQ Trigger: TTGGCCCTGGTGCGCAGCGCAGGGGTTCCGGGCGCG...TTGGATGAGCAATCTGTTAAAGAAGTAAGAAGCACTCGGGCAGCGTGTACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| CDS-3UTR TCA 90 bp | TGCAGAATGCTAACACAGGGGCCTACCCAACCCCAGGTCCCTGGGACAGGTGCTTCACTAGTGGGTAGGTaGCGACAAGAAGTAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: CRMLTQGPTQPQVPGTGASLVGR*RQEVRT Trigger: CGTCCTTACTTCTTGTCGTCACCTACCCACTAGTGA...AGCACCTGTCCCAGGGACCTGGGGTTGGGTAGGCCCCTGTGTTAGCATTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR CAA 72 bp | TACAGAGGCAGGCATACAGCCGGATCACAGGAGCCCTaGACAGCAGACCATCCGAGTAACGCACCCCAATTA | + |
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Preference number: 4 (lower is better) Translates to: YRGRHTAGSQEP*TADHPSNAPQL Trigger: TAATTGGGGTGCGTTACTCGGATGGTCTGCTGTCAAGGGCTCCTGTGATCCGGCTGTATGCCTGCCTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR CAA 72 bp | TGCTTGAGACAGGATCCTACTATGCCGCTCGATGCCTaGACCTCACAGTTTTCCTGCCTCTGCTTCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CLRQDPTMPLDA*TSQFSCLCFLR Trigger: CCTCAGGAAGCAGAGGCAGGAAAACTGTGAGGTCAAGGCATCGAGCGGCATAGTAGGATCCTGTCTCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
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| 3UTR CAA 72 bp | AACAGGAGCATTCCTACTGTGCGGTTGGAGGTGAACTaGTCCCAGCAGTCCTCGGCTCTGTGGATGTCTACA | + |
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Preference number: 4 (lower is better) Translates to: NRSIPTVRLEVN*SQQSSALWMST Trigger: TGTAGACATCCACAGAGCCGAGGACTGCTGGGACAAGTTCACCTCCAACCGCACAGTAGGAATGCTCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| 3UTR CAA 72 bp | ACAATCCCTAAGAACAGGAGCATTCCTACTGTGCGGTaGGAGGTGAACTTGTCCCAGCAGTCCTCGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TIPKNRSIPTVR*EVNLSQQSSAL Trigger: CAGAGCCGAGGACTGCTGGGACAAGTTCACCTCCAACCGCACAGTAGGAATGCTCCTGTTCTTAGGGATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
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| CDS-3UTR TCA 90 bp | TGTGGACTTCAGGCCGATCAGAGCATCGTCTTTCTTGTCCTGGTGGGCATAGATTCACTAGTGGGTAGGTaGCGACAAGAAGTAAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: CGLQADQSIVFLVLVGIDSLVGR*RQEVRT Trigger: CGTCCTTACTTCTTGTCGTCACCTACCCACTAGTGA...ATCTATGCCCACCAGGACAAGAAAGACGATGCTCTGATCGGCCTGAAGTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126981.2 |
||
| 3UTR CAA 72 bp | CAAATGAGTTTATTTGCTAGGAGAGAACCTAGAGCCTaGGGCACACTGCATGGTGCCCACACTTCCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMSLFARREPRA*GTLHGAHTSHE Trigger: CTCATGGGAAGTGTGGGCACCATGCAGTGTGCCCAAGGCTCTAGGTTCTCTCCTAGCAAATAAACTCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR TCA 90 bp | GGACTTCAGGCCGATCAGAGCATCGTCTTTCTTGTCCTGGTGGGCATAGATAGTACTGAGGCCAAAACGTaGTTCTTTTCACTAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLQADQSIVFLVLVGIDSTEAKT*FFSLVG Trigger: ACCCACTAGTGAAAAGAATCACGTTTTGGCCTCAGT...ACTATCTATGCCCACCAGGACAAGAAAGACGATGCTCTGATCGGCCTGAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126981.2 |
||
| CDS-3UTR GCA 90 bp | TTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATGAGAAGCAGGAGAACGCCCAGTaGCAAGGTCAGCTGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDELCKLFPEAPETLDEKQENAQ*QGQLSP Trigger: GGGGGACAGCTGACCTTGGCACTGGGCGTTCTCCTG...CTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGTACACGCTGCCCGAGTGCTTCTTACTTCTTTAACAGATTGCTCATCCAATGCCTTGTGTTCTCCTaGAACAGCAGTGCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTRCPSASYFFNRLLIQCLVFS*NSSAVD Trigger: GTCCACAGCACTGCTGTTCCAGGAGAACACAAGGCA...TTGGATGAGCAATCTGTTAAAGAAGTAAGAAGCACTCGGGCAGCGTGTACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGTTGTACAAATGAGTTTATTTGCTAGGAGAGAACCTAGAGCCTTGGGCGATCACAGGAGCCCTTaGCAGCAGACCATCCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKVVQMSLFARREPRALGDHRSP*QQTIRV Trigger: TACTCGGATGGTCTGCTGTCAAGGGCTCCTGTGATC...GCCCAAGGCTCTAGGTTCTCTCCTAGCAAATAAACTCATTTGTACAACTTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCATTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATCTCCTGGAACAGCAGTaGTGTGGACTTCAGGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPLDELCKLFPEAPETLDLLEQQ*CGLQAD Trigger: ATCGGCCTGAAGTCCACAGCACTGCTGTTCCAGGAG...ATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAATGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGTTGTACAAATGAGTTTATTTGCTAGGAGAGAACCTAGAGCCTTGGGCAAGCCACTAAGCCACTaGCTTGTGTTCTCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKVVQMSLFARREPRALGKPLSH*LVFSWN Trigger: GTTCCAGGAGAACACAAGGCAGTGGCTTAGTGGCTT...GCCCAAGGCTCTAGGTTCTCTCCTAGCAAATAAACTCATTTGTACAACTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGTACACGCTGCCCGAGTGCTTCTTACTTCTTTAACAGATTGCTCATCCAACTTCCGTCTTTTCTTTaGACAGGTTTCCAAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTRCPSASYFFNRLLIQLPSFL*TGFQGQ Trigger: TTGTCCTTGGAAACCTGTGCAAAGAAAAGACGGAAG...TTGGATGAGCAATCTGTTAAAGAAGTAAGAAGCACTCGGGCAGCGTGTACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| 3UTR CAA 72 bp | ACAGCTTCAGCATCTTTTGCTTCTTCCGTCTTTTCTTaGCACAGGTTTCCAAGGACAATCCCTAAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TASASFASSVFS*HRFPRTIPKNR Trigger: CCTGTTCTTAGGGATTGTCCTTGGAAACCTGTGCAAAGAAAAGACGGAAGAAGCAAAAGATGCTGAAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTGAATTACAGCTTTGGCAGGTCTGGAAAACAACCTaGGTCAGCGGCCAGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILLKHLESEWLLELQLWQVWKTT*VSGQTN Trigger: ATTGGTCTGGCCGCTGACCCAGGTTGTTTTCCAGAC...CTGCCAAAGCTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| 3UTR CAA 72 bp | GAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTaGGATGAGAAGGAACAAGGACAGAAGGTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELCKLFPEAPET*DEKEQGQKVAE Trigger: TTCTGCAACCTTCTGTCCTTGTTCCTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR TCA 90 bp | TTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATGAGAAGACTGAGGCCAAAACGTaGTTCTTTTCACTAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDELCKLFPEAPETLDEKTEAKT*FFSLVG Trigger: ACCCACTAGTGAAAAGAATCACGTTTTGGCCTCAGT...CTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCATTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATAGCGATTGGGCGGTTTaGTGTCCTTGTAACCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPLDELCKLFPEAPETLDSDWAV*CPCNLF Trigger: AAAAAGGTTACAAGGACAGCAAACCGCCCAATCGCT...ATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAATGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR GCA 90 bp | TTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATGAGAAGATTAATAGTACAGCCTaGTCCACGCATCAGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDELCKLFPEAPETLDEKINSTA*STHQNS Trigger: GCTATTCTGATGCGTGGAGCAGGCTGTACTATTAAT...CTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR GCA 90 bp | TTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATGAGAAGAGCTTCAGCATCTTTTaGTTCTTCCGTCTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDELCKLFPEAPETLDEKSFSIF*FFRLFF Trigger: AAAGAAAAGACGGAAGAAGCAAAAGATGCTGAAGCT...CTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS GCA 90 bp | GCTGCGCACCAGGGCCAATGGGAGCCCGCGCGGACCTCGCAGCCATaGGGACCGAACGGCCCGCAGGCCCCGCGCGAGCCCCGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAHQGQWEPARTSQP*GPNGPQAPREPRAS Trigger: GGAGGCGCGGGGCTCGCGCGGGGCCTGCGGGCCGTTCGGTCCGCATGGCTGCGAGGTCCGCGCGGGCTCCCATTGGCCCTGGTGCGCAGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031262.9 ENSMUST00000126981.2 |
||
| CDS CCA 90 bp | ACGCCCAGTGCCAAGGTCAGCTGTCCCCCAAGGAAGACGAAGGACTaGAAGGTCGAAATGTCTCCAGCAGCGATTGGGCGGTTTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSAKVSCPPRKTKD*KVEMSPAAIGRFAV Trigger: GACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTCGTCTTCCTTGGGGGACAGCTGACCTTGGCACTGGGCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031262.9 ENSMUST00000126981.2 |
||
| CDS GCA 90 bp | AGTCTGGAAAACAACCTGGGTCAGCGGCCAGACCAATGCTCCAAGTaGATGGCAAATACAGCAGCCAGGTTCCTATGGGCTTGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLENNLGQRPDQCSK*MANTAARFLWACPG Trigger: GCCTGGACAAGCCCATAGGAACCTGGCTGCTGTATTTGCCATGCACTTGGAGCATTGGTCTGGCCGCTGACCCAGGTTGTTTTCCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS CCA 90 bp | TGGAAAACAACCTGGGTCAGCGGCCAGACCAATGCTCCAAGTGCATaGCAAATACAGCAGCCAGGTTCCTATGGGCTTGTCCAGGCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WKTTWVSGQTNAPSA*QIQQPGSYGLVQAH Trigger: ATGCGCCTGGACAAGCCCATAGGAACCTGGCTGCTGTATTTGCCATGCACTTGGAGCATTGGTCTGGCCGCTGACCCAGGTTGTTTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS CCA 90 bp | AAGGAAGACGAAGGACTGGAAGGTCGAAATGTCTCCAGCAGCGATTaGGCGGTTTGCTGTCCTTGTAACCTATGGGCTTGTCCAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KEDEGLEGRNVSSSD*AVCCPCNLWACPGA Trigger: TGCGCCTGGACAAGCCCATAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTCGTCTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126981.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCAGGCATACAGCCGGATCACAGGAGCCCTTGACAGCAGACCATCCGAGAGGACGCTGCTCCCATaGCTATACTGTAGTAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QRQAYSRITGALDSRPSERTLLP*LYCSSL Trigger: TAAACTACTACAGTATAGCAATGGGAGCAGCGTCCT...CTCGGATGGTCTGCTGTCAAGGGCTCCTGTGATCCGGCTGTATGCCTGCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126981.2 |
||
| CDS GCA 90 bp | ACATGTACCAGTCTGGAAAACAACCTGGGTCAGCGGCCAGACCAATaGTCCAAGTGCATGGCAAATACAGCAGCCAGGTTCCTATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TCTSLENNLGQRPDQ*SKCMANTAARFLWA Trigger: AGCCCATAGGAACCTGGCTGCTGTATTTGCCATGCACTTGGAGCATTGGTCTGGCCGCTGACCCAGGTTGTTTTCCAGACTGGTACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS GCA 90 bp | GAAGGACTGGAAGGTCGAAATGTCTCCAGCAGCGATTGGGCGGTTTaGTGTCCTTGTAACCTCAACACAGGAAAAGAGAGCCCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGLEGRNVSSSDWAV*CPCNLNTGKESPSV Trigger: AACTGAAGGGCTCTCTTTTCCTGTGTTGAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
||
| CDS CCA 90 bp | AAGGAAGACGAAGGACTGGAAGGTCGAAATGTCTCCAGCAGCGATTaGGCGGTTTGCTGTCCTTGTAACCTCAACACAGGAAAAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEDEGLEGRNVSSSD*AVCCPCNLNTGKES Trigger: GCTCTCTTTTCCTGTGTTGAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTCGTCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
||
| CDS CCA 90 bp | AAGGAAGACGAAGGACTGGAAGGTCGAAATGTCTCCAGCAGCGATTaGGCGGTTTGCTGTCCTTGTAACCTTTTTATCGAAGTCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KEDEGLEGRNVSSSD*AVCCPCNLFIEVTV Trigger: GACCGTGACTTCGATAAAAAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTCGTCTTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR CAA 90 bp | TTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATGAGAAGCAGGTTCCTATGGGCTaGTCCAGGCGCATGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LDELCKLFPEAPETLDEKQVPMG*SRRMRR Trigger: GCGCCTCATGCGCCTGGACAAGCCCATAGGAACCTG...CTTCTCATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR CAA 90 bp | AAGCCATTAGATGAGTTATGCAAGTTGTTTCCTGAAGCTCCTGAAACTTTGGATCGGTTGGAGGTGAACTaGTCCCAGCAGTCCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KPLDELCKLFPEAPETLDRLEVN*SQQSSA Trigger: AGCCGAGGACTGCTGGGACAAGTTCACCTCCAACCG...ATCCAAAGTTTCAGGAGCTTCAGGAAACAACTTGCATAACTCATCTAATGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGTACACGCTGCCCGAGTGCTTCTTACTTCTTTAACAGATTGCTCATCCAAAGGACGCTGCTCCCATaGCTATACTGTAGTAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSTRCPSASYFFNRLLIQRTLLP*LYCSSL Trigger: TAAACTACTACAGTATAGCAATGGGAGCAGCGTCCT...TTGGATGAGCAATCTGTTAAAGAAGTAAGAAGCACTCGGGCAGCGTGTACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAACATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTGAATTACAGGGATCACAGGAGCCCTaGACAGCAGACCATCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FANILLKHLESEWLLELQGSQEP*TADHPS Trigger: ACTCGGATGGTCTGCTGTCAAGGGCTCCTGTGATCC...CTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGATGTTGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCTAAAACATCTAGAATCAGAATGGCTTCTTGAATTACAGCTTTGGCAGTCTTCCGTCTTTTCTTaGCACAGGTTTCCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ILLKHLESEWLLELQLWQSSVFS*HRFPRT Trigger: TGTCCTTGGAAACCTGTGCAAAGAAAAGACGGAAGA...CTGCCAAAGCTGTAATTCAAGAAGCCATTCTGATTCTAGATGTTTTAGAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS-3UTR CAA 90 bp | TCCAAGCCTAACAATGTAGTCTTAAGCCCTGAAAGTTGTACAAATGAGTTTATTCAGCTTCAGCATCTTTaGCTTCTTCCGTCTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKPNNVVLSPESCTNEFIQLQHL*LLPSFL Trigger: AAGAAAAGACGGAAGAAGCAAAAGATGCTGAAGCTG...AATAAACTCATTTGTACAACTTTCAGGGCTTAAGACTACATTGTTAGGCTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS GCA 72 bp | CAGGGCCAATGGGAGCCCGCGCGGACCTCGCAGCCATaGGGACCGAACGGCCCGCAGGCCCCGCGCGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QGQWEPARTSQP*GPNGPQAPREP Trigger: GGGCTCGCGCGGGGCCTGCGGGCCGTTCGGTCCGCATGGCTGCGAGGTCCGCGCGGGCTCCCATTGGCCCTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031262.9 ENSMUST00000126981.2 |
||
| CDS CCA 72 bp | GCCAAGGTCAGCTGTCCCCCAAGGAAGACGAAGGACTaGAAGGTCGAAATGTCTCCAGCAGCGATTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AKVSCPPRKTKD*KVEMSPAAIGR Trigger: CCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTCGTCTTCCTTGGGGGACAGCTGACCTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031262.9 ENSMUST00000126981.2 |
||
| CDS CCA 72 bp | ACCTGGGTCAGCGGCCAGACCAATGCTCCAAGTGCATaGCAAATACAGCAGCCAGGTTCCTATGGGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TWVSGQTNAPSA*QIQQPGSYGLV Trigger: GACAAGCCCATAGGAACCTGGCTGCTGTATTTGCCATGCACTTGGAGCATTGGTCTGGCCGCTGACCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS GCA 72 bp | AACAACCTGGGTCAGCGGCCAGACCAATGCTCCAAGTaGATGGCAAATACAGCAGCCAGGTTCCTATGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: NNLGQRPDQCSK*MANTAARFLWA Trigger: AGCCCATAGGAACCTGGCTGCTGTATTTGCCATGCACTTGGAGCATTGGTCTGGCCGCTGACCCAGGTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS GCA 72 bp | GAAGGTCGAAATGTCTCCAGCAGCGATTGGGCGGTTTaGTGTCCTTGTAACCTATGGGCTTGTCCAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: EGRNVSSSDWAV*CPCNLWACPGA Trigger: TGCGCCTGGACAAGCCCATAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126981.2 |
||
| CDS GCA 72 bp | AGTCTGGAAAACAACCTGGGTCAGCGGCCAGACCAATaGTCCAAGTGCATGGCAAATACAGCAGCCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLENNLGQRPDQ*SKCMANTAARF Trigger: GAACCTGGCTGCTGTATTTGCCATGCACTTGGAGCATTGGTCTGGCCGCTGACCCAGGTTGTTTTCCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS CCA 72 bp | GAAGGACTGGAAGGTCGAAATGTCTCCAGCAGCGATTaGGCGGTTTGCTGTCCTTGTAACCTATGGGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: EGLEGRNVSSSD*AVCCPCNLWAC Trigger: ACAAGCCCATAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126981.2 |
||
| CDS CCA 72 bp | GAAGGACTGGAAGGTCGAAATGTCTCCAGCAGCGATTaGGCGGTTTGCTGTCCTTGTAACCTCAACACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: EGLEGRNVSSSD*AVCCPCNLNTG Trigger: TCCTGTGTTGAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
||
| CDS GCA 72 bp | GAAGGTCGAAATGTCTCCAGCAGCGATTGGGCGGTTTaGTGTCCTTGTAACCTCAACACAGGAAAAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: EGRNVSSSDWAV*CPCNLNTGKES Trigger: GCTCTCTTTTCCTGTGTTGAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135146.2 |
||
| CDS GCA 72 bp | GAAGGTCGAAATGTCTCCAGCAGCGATTGGGCGGTTTaGTGTCCTTGTAACCTTTTTATCGAAGTCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EGRNVSSSDWAV*CPCNLFIEVTV Trigger: GACCGTGACTTCGATAAAAAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS GCA 72 bp | GAAGTCACGGTCCCACATGTCATTAATAGTACAGCCTaGTCCACGCATCAGAATAGCTCCAGTGCCAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EVTVPHVINSTA*STHQNSSSAKK Trigger: CTTTTTGGCACTGGAGCTATTCTGATGCGTGGAGCAGGCTGTACTATTAATGACATGTGGGACCGTGACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||
| CDS CCA 72 bp | GAAGGACTGGAAGGTCGAAATGTCTCCAGCAGCGATTaGGCGGTTTGCTGTCCTTGTAACCTTTTTATCGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGLEGRNVSSSD*AVCCPCNLFIE Trigger: TTCGATAAAAAGGTTACAAGGACAGCAAACCGCCCAATCGCTGCTGGAGACATTTCGACCTTCCAGTCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031262.9 |
||