Pregenerated sensors for COQ10A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039914Ensembl transcript IDs: ENSMUST00000043211.7, ENSMUST00000218507.2, ENSMUST00000219815.2, ENSMUST00000220027.2, ENSMUST00000220227.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGACAGCCCTGGTTTTTATTTGGTGTGCAACGGCCTTGGGCGTGTaGGGCTTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCC | + |
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Preference number: 1 (lower is better) Translates to: VTALVFIWCATALGV*GFQNVPDTFFCLTS Trigger: GGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACACGCCCAAGGCCGTTGCACACCAAATAAAAACCAGGGCTGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR TCA 90 bp | TTGGTGTGCAACGGCCTTGGGCGTGTGAGGCTTTCAGAATGTACCTaGCACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: LVCNGLGRVRLSECT*HFLLSHFHSCYLSC Trigger: ACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACACGCCCAAGGCCGTTGCACACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGCAGGCTCTGCTATCTTTCCTGTaGTCAGACAGCATGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PHLLPVRQHGCVPKLRQALLSFL*SDSMQP Trigger: GGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAG...AGCCTGCCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTTCTCACTTCCATTCCTaGTATCTTTCCTGTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TLLSAFSSSALWRCGKAASHFHS*YLSCAQ Trigger: CTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGA...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTCAGTTTAGGAAGAATTaGGAGGAGATTAGACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: TLLSAFSSSALWRCGKAAQFRKN*EEIRPL Trigger: GAGAGGTCTAATCTCCTCTCAATTCTTCCTAAACTG...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGACCAGGCACAGTTTAGGAAGAATTaGGAGGAGATTAGACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: ASQYLCVRKLLLYSPDQAQFRKN*EEIRPL Trigger: GAGAGGTCTAATCTCCTCTCAATTCTTCCTAAACTG...TGCCTGGTCGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGCTTTCAGAATGTACCTaGCACTTTCTTCTGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AAPHLLPVRQHGCVPKLRLSECT*HFLLSH Trigger: GTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAG...CCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGGAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCAGTTTAGGAAGAATTaGGAGGAGATTAGACCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FCLTSIPAIFPVLRQHAAQFRKN*EEIRPL Trigger: GAGAGGTCTAATCTCCTCTCAATTCTTCCTAAACTG...GGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCTTGCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGCTTTCAGAATGTACCTaGCACTTTCTTCTGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GFLLASISVSGSYYCIPPLSECT*HFLLSH Trigger: GTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAG...CGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGCAAGAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR CCA 72 bp | ACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTaGCGCTGTGGTAAAGCAGCTCCTCACCTTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: TTLLSAFSSSAL*RCGKAAPHLLP Trigger: AGGTAGAAGGTGAGGAGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR TCA 72 bp | TTACTACTGTATTCCCCCGACCAGGCACAGAGACGGTaGCAGCCCTGGTTTTTATTTGGTGTGCAACGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LLLYSPDQAQRR*QPWFLFGVQRP Trigger: AGGCCGTTGCACACCAAATAAAAACCAGGGCTGTCACCGTCTCTGTGCCTGGTCGGGGGAATACAGTAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR GCA 72 bp | CACAGAGACGGTGACAGCCCTGGTTTTTATTTGGTGTaGAACGGCCTTGGGCGTGTGAGGCTTTCAGAATGT | + |
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Preference number: 3 (lower is better) Translates to: HRDGDSPGFYLV*NGLGRVRLSEC Trigger: ACATTCTGAAAGCCTCACACGCCCAAGGCCGTTGCACACCAAATAAAAACCAGGGCTGTCACCGTCTCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCATCCCAACAACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTCAGGGTAAAGGCTTCTaGCTAGCCAGTATCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VHPNNVDHTVECFLLLCSQGKGF*LASISV Trigger: CACAGAGATACTGGCTAGCAAGAAGCCTTTACCCTG...AGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTTGTTGGGATGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR TCA 72 bp | AACGGCCTTGGGCGTGTGAGGCTTTCAGAATGTACCTaGCACTTTCTTCTGTCTCACTTCCATTCCTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: NGLGRVRLSECT*HFLLSHFHSCY Trigger: ATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACACGCCCAAGGCCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR TCA 72 bp | TTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTaGGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: FYLSDSMDVFLN*GRLPFLLRSLA Trigger: TGCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR TCA 72 bp | CTGGTTTTTATTTGGTGTGCAACGGCCTTGGGCGTGTaGGGCTTTCAGAATGTACCTGACACTTTCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LVFIWCATALGV*GFQNVPDTFFC Trigger: ACAGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACACGCCCAAGGCCGTTGCACACCAAATAAAAACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR GCA 90 bp | CCAACAACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTCGAGAAGTCCACAGTaGAGGTTCGAGGGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PTTWTTLLSAFSSSALWRSRSPQ*RFEGRR Trigger: CCTCCTACCCTCGAACCTGCACTGTGGACTTCTCGA...GCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR GCA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTACCAAACTTGGTTGCTaGCCGGCGCTCAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLLSAFSSSALWRCGKAATKLGC*PALKGS Trigger: GCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGT...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | AACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGAACTCTCGGTACTCCTaGACGTTGGACACCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: NVDHTVECFLLLCSVALWNSRYS*TLDTTS Trigger: TGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTT...CCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTGTCGCCAGCTGGGAGTaGAGCAGAGAGCGAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLSAFSSSALWRCGKAAVASWE*SRERNS Trigger: TGAGTTTCGCTCTCTGCTCCACTCCCAGCTGGCGAC...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| 3UTR CAA 72 bp | ACCAGGCACAGAGACGGTGACAGCCCTGGTTTTTATTaGGTGTGCAACGGCCTTGGGCGTGTGAGGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TRHRDGDSPGFY*VCNGLGRVRLS Trigger: TGAAAGCCTCACACGCCCAAGGCCGTTGCACACCAAATAAAAACCAGGGCTGTCACCGTCTCTGTGCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | GTGCATCCCAACAACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTATGAAGGAACGACTATaGGGTAGGCCAGCCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VHPNNVDHTVECFLLLCSMKERL*GRPASA Trigger: AGCGGAGGCTGGCCTACCTCATAGTCGTTCCTTCAT...AGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTTGTTGGGATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | TTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTCCTCACGCTGGATACTACCAGTaGCTTCTTACACCACGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSAFSSSALWRCGKAAPHAGYYQ*LLTPRH Trigger: GTGCCGTGGTGTAAGAAGTCACTGGTAGTATCCAGC...GTGAGGAGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | TCGCCAGCTGGGAGTGGAGCAGAGAGCGAAACTCAAAGGAAATCGAGAAGTCCAGTGCAAACAGCCCCATaGTCCTACGCTCCGAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: SPAGSGAESETQRKSRSPVQTAP*SYAPSK Trigger: CTTACTCGGAGCGTAGGATCATGGGGCTGTTTGCAC...TGGACTTCTCGATTTCCTTTGAGTTTCGCTCTCTGCTCCACTCCCAGCTGGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218507.2 |
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| CDS-3UTR GCA 90 bp | GCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGACCAGGCATGGACCAAACTTGGTTaGTGCCCGGCGCTCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: ASQYLCVRKLLLYSPDQAWTKLG*CPALKG Trigger: GCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCA...TGCCTGGTCGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | AACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGGGTGACCCTTACGGCTaGATACTACCAGTGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: NVDHTVECFLLLCSVALWGDPYG*ILPVTS Trigger: AGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACC...CCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | TCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCGTCGCCAGCTGGGAGTaGAGCAGAGAGCGAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: SVSLPFLLSFLCSDSMQPVASWE*SRERNS Trigger: TGAGTTTCGCTCTCTGCTCCACTCCCAGCTGGCGAC...GGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | GTGCAACGGCCTTGGGCGTGTGAGGCTTTCAGAATGTACCTGACACTTTCTTCTGTCGCCAGCTGGGAGTaGAGCAGAGAGCGAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: VQRPWACEAFRMYLTLSSVASWE*SRERNS Trigger: TGAGTTTCGCTCTCTGCTCCACTCCCAGCTGGCGAC...AGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACACGCCCAAGGCCGTTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTCCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGATGAAGGAACGACTATaGGGTAGGCCAGCCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: AAPHLLPVRQHGCVPKLRMKERL*GRPASA Trigger: AGCGGAGGCTGGCCTACCTCATAGTCGTTCCTTCAT...CCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGGAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | CCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGCAGGCTATGAAGGAACGACTATaGGGTAGGCCAGCCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: PHLLPVRQHGCVPKLRQAMKERL*GRPASA Trigger: AGCGGAGGCTGGCCTACCTCATAGTCGTTCCTTCAT...AGCCTGCCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | CTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCAGGGTAAAGGCTTCTTGCGCACTTCATGAAACATaGGTTCACGGGGGATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRQAAFSPEKLSRVKASCALHET*VHGGWL Trigger: CAGCCATCCCCCGTGAACTCATGTTTCATGAAGTGC...GCAAGAAGCCTTTACCCTGCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR GCA 90 bp | TCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCTCGAGAAGTCCACAGTaGAGGTTCGAGGGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SVSLPFLLSFLCSDSMQPSRSPQ*RFEGRR Trigger: CCTCCTACCCTCGAACCTGCACTGTGGACTTCTCGA...GGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR GCA 90 bp | TTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCACCAAACTTGGTTGCTaGCCGGCGCTCAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FCLTSIPAIFPVLRQHAATKLGC*PALKGS Trigger: GCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGT...GGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR GCA 90 bp | CATGGATGTGTTCCTAAACTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCTGGACCAAACTTGGTTaGTGCCCGGCGCTCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HGCVPKLRQAAFSPEKLSWTKLG*CPALKG Trigger: GCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCA...GCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAGTTTAGGAACACATCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTAACTCTCGGTACTCCTaGACGTTGGACACCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLLSAFSSSALWRCGKAANSRYS*TLDTTS Trigger: TGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTT...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | GTGCATCCCAACAACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTAGCCTTGACCATGTGTaGTTTGACCATGGAGACGGC | + |
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Preference number: 4 (lower is better) Translates to: VHPNNVDHTVECFLLLCSSLDHV*FDHGDG Trigger: GCCGTCTCCATGGTCAAACCACACATGGTCAAGGCT...AGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTTGTTGGGATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | CTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCAGGGTAAAGGCTTCTTGCAATTGGGCTTTCAGGTaGCCCTTACGGCTGGATACT | + |
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Preference number: 4 (lower is better) Translates to: LRQAAFSPEKLSRVKASCNWAFR*PLRLDT Trigger: AGTATCCAGCCGTAAGGGTCACCTGAAAGCCCAATT...GCAAGAAGCCTTTACCCTGCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTGGTACTCCTGGACGTTaGACACCACCTCAAACATCT | + |
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Preference number: 4 (lower is better) Translates to: TLLSAFSSSALWRCGKAAGTPGR*TPPQTS Trigger: AGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACC...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CCA 90 bp | GTGCATCCCAACAACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGGTGACCCTTACGGCTaGATACTACCAGTGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VHPNNVDHTVECFLLLCSGDPYG*ILPVTS Trigger: AGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACC...AGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTTGTTGGGATGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTCCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGAATTGGGCTTTCAGGTaGCCCTTACGGCTGGATACT | + |
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Preference number: 4 (lower is better) Translates to: AAPHLLPVRQHGCVPKLRNWAFR*PLRLDT Trigger: AGTATCCAGCCGTAAGGGTCACCTGAAAGCCCAATT...CCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGGAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | TTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCGCACTTCATGAAACATaGGTTCACGGGGGATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FCLTSIPAIFPVLRQHAAALHET*VHGGWL Trigger: CAGCCATCCCCCGTGAACTCATGTTTCATGAAGTGC...GGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | TTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCGCATTGAGTACCCCATaGTCCTACGCTCCGAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: FCLTSIPAIFPVLRQHAAALSTP*SYAPSK Trigger: CTTACTCGGAGCGTAGGATCATGGGGTACTCAATGC...GGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR TCA 90 bp | CATGGATGTGTTCCTAAACTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCGCATTGAGTACCCCATaGTCCTACGCTCCGAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HGCVPKLRQAAFSPEKLSALSTP*SYAPSK Trigger: CTTACTCGGAGCGTAGGATCATGGGGTACTCAATGC...GCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAGTTTAGGAACACATCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GTGCAACGGCCTTGGGCGTGTGAGGCTTTCAGAATGTACCTGACACTTTCTTCTGGTACTCCTGGACGTTaGACACCACCTCAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VQRPWACEAFRMYLTLSSGTPGR*TPPQTS Trigger: AGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACC...AGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACACGCCCAAGGCCGTTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GTGCATCCCAACAACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTACGTTCCAAGACAGGTaGAAACCCAACCTCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VHPNNVDHTVECFLLLCSTFQDR*KPNLQL Trigger: CAATTGGAGGTTGGGTTTCCACCTGTCTTGGAACGT...AGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTTGTTGGGATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTTGCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGTTTCTGGACCAAACTTaGTTGCTGCCCGGCGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GFLLASISVSGSYYCIPPFLDQT*LLPGAQ Trigger: TTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAA...CGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGCAAGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTTGCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGGGGGATGGCTGTTTCTaGACCAAACTTGGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFLLASISVSGSYYCIPPGDGCF*TKLGCC Trigger: GCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCC...CGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGCAAGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTTGCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGGTTTGGTGCACTTCATaGAACATGAGTTCACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFLLASISVSGSYYCIPPVWCTS*NMSSRG Trigger: CCCCCGTGAACTCATGTTTCATGAAGTGCACCAAAC...CGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGCAAGAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAGGCTTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGTGGACCAAACTTGGTTaGTGCCCGGCGCTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CEAFRMYLTLSSVSLPFLWTKLG*CPALKG Trigger: GCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCA...CAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGACCAGGCAACGTTCCAAGACAGGTaGAAACCCAACCTCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: ASQYLCVRKLLLYSPDQATFQDR*KPNLQL Trigger: CAATTGGAGGTTGGGTTTCCACCTGTCTTGGAACGT...TGCCTGGTCGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCAGTTTAGGAAGAATTGAGAGCCTTGACCATGTGTaGTTTGACCATGGAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSFLCSDSMQPSLGRIESLDHV*FDHGDG Trigger: GCCGTCTCCATGGTCAAACCACACATGGTCAAGGCT...CTCAATTCTTCCTAAACTGGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR GCA 90 bp | GTGCATCCCAACAACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTACCTCAAACATCTCCTaGATTGAGTACCTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHPNNVDHTVECFLLLCSTSNIS*IEYLQQ Trigger: TTGCTGTAGGTACTCAATGCAGGAGATGTTTGAGGT...AGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTTGTTGGGATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCAGTTTAGGAAGAATTGAGGGTGACCCTTACGGCTaGATACTACCAGTGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSFLCSDSMQPSLGRIEGDPYG*ILPVTS Trigger: AGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACC...CTCAATTCTTCCTAAACTGGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCTTTCTGGACCAAACTTaGTTGCTGCCCGGCGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPDTFFCLTSIPAIFPVLFLDQT*LLPGAQ Trigger: TTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAA...GAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR TCA 90 bp | GTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCGTTTGGTGCACTTCATaGAACATGAGTTCACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPDTFFCLTSIPAIFPVLVWCTS*NMSSRG Trigger: CCCCCGTGAACTCATGTTTCATGAAGTGCACCAAAC...GAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCGGTACTCCTGGACGTTaGACACCACCTCAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VPDTFFCLTSIPAIFPVLGTPGR*TPPQTS Trigger: AGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACC...GAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCAGTTTAGGAAGAATTGAGACGTTCCAAGACAGGTaGAAACCCAACCTCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSFLCSDSMQPSLGRIETFQDR*KPNLQL Trigger: CAATTGGAGGTTGGGTTTCCACCTGTCTTGGAACGT...CTCAATTCTTCCTAAACTGGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGCTTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGGGGGATGGCTGTTTCTaGACCAAACTTGGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CEAFRMYLTLSSVSLPFLGDGCF*TKLGCC Trigger: GCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCC...CAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGATTAGACCTCTCAGAGCAAGAGCCAAACCAATAAATAAAACTGGGTGTAGCCTTGACCATGTGTaGTTTGACCATGGAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEIRPLRARAKPINKTGCSLDHV*FDHGDG Trigger: GCCGTCTCCATGGTCAAACCACACATGGTCAAGGCT...ACACCCAGTTTTATTTATTGGTTTGGCTCTTGCTCTGAGAGGTCTAATCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAGATTAGACCTCTCAGAGCAAGAGCCAAACCAATAAATAAAACTGGGTGTGTTTGGTGCACTTCATaGAACATGAGTTCACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEIRPLRARAKPINKTGCVWCTS*NMSSRG Trigger: CCCCCGTGAACTCATGTTTCATGAAGTGCACCAAAC...ACACCCAGTTTTATTTATTGGTTTGGCTCTTGCTCTGAGAGGTCTAATCTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTGCACTTCATGAAACATaGGTTCACGGGGGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQNVPDTFFCLTSIPAIFALHET*VHGGWL Trigger: CAGCCATCCCCCGTGAACTCATGTTTCATGAAGTGC...AAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTTTTCTGGACCAAACTTaGTTGCTGCCCGGCGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQNVPDTFFCLTSIPAIFFLDQT*LLPGAQ Trigger: TTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAA...AAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTAATTGGGCTTTCAGGTaGCCCTTACGGCTGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: FQNVPDTFFCLTSIPAIFNWAFR*PLRLDT Trigger: AGTATCCAGCCGTAAGGGTCACCTGAAAGCCCAATT...AAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTAAACATCTCCTGCATTaGGTACCTACAGCAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQNVPDTFFCLTSIPAIFKHLLH*VPTARG Trigger: TCCTCTTGCTGTAGGTACTCAATGCAGGAGATGTTT...AAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTCCTCACAAATCAGAAACCTCATaGGACGCGGCGGCCGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAFSSSALWRCGKAAPHKSETS*DAAAAE Trigger: CTCCGCGGCCGCCGCGTCCAATGAGGTTTCTGATTT...GTGAGGAGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043211.7 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | AACGTGGACCACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGCGGTACTCCTGGACGTaGGACACCACCTCAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: NVDHTVECFLLLCSVALWRYSWT*DTTSNI Trigger: GATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCG...CCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGTGGTCCACGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCAGGGTAAAGGCTTCTTGCCTGGACCAAACTTGGTaGCTGCCCGGCGCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRQAAFSPEKLSRVKASCLDQTW*LPGAQR Trigger: CCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAG...GCAAGAAGCCTTTACCCTGCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTCTGGACCAAACTTGGTaGCTGCCCGGCGCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLSAFSSSALWRCGKAALDQTW*LPGAQR Trigger: CCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAG...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTCCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGCTGGACCAAACTTGGTaGCTGCCCGGCGCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAPHLLPVRQHGCVPKLRLDQTW*LPGAQR Trigger: CCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAG...CCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGGAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CAA 90 bp | CATGGATGTGTTCCTAAACTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCAAATCAGAAACCTCATaGGACGCGGCGGCCGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HGCVPKLRQAAFSPEKLSKSETS*DAAAAE Trigger: CTCCGCGGCCGCCGCGTCCAATGAGGTTTCTGATTT...GCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAGTTTAGGAACACATCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043211.7 ENSMUST00000220227.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCAGGGTAAAGGCTTCTTGCCGGTACTCCTGGACGTaGGACACCACCTCAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: LRQAAFSPEKLSRVKASCRYSWT*DTTSNI Trigger: GATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCG...GCAAGAAGCCTTTACCCTGCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGGTTTCTGGACCAAACTaGGTTGCTGCCCGGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAPHLLPVRQHGCVPKLRVSGPN*VAARRS Trigger: TGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAAC...CCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS TCA 90 bp | CTCCAATTGGGCTTTCAGGTGACCCTTACGGCTGGATACTACCAGTaGCTTCTTACACCACGGCACGAACTCTCGGTACTCCTGGACGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQLGFQVTLTAGYYQ*LLTPRHELSVLLDV Trigger: AACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACCTGAAAGCCCAATTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS GCA 90 bp | AACTCTCGGTACTCCTGGACGTTGGACACCACCTCAAACATCTCCTaGATTGAGTACCTACAGCAAGAGGAATCAGAGGCCGAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: NSRYSWTLDTTSNIS*IEYLQQEESEAEEP Trigger: GGGTTCCTCGGCCTCTGATTCCTCTTGCTGTAGGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
||
| CDS CCA 90 bp | GTGGAAACCCAACCTCCAATTGGGCTTTCAGGTGACCCTTACGGCTaGATACTACCAGTGACTTCTTACACCACGGCACGAACTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: VETQPPIGLSGDPYG*ILPVTSYTTARTLG Trigger: ACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACCTGAAAGCCCAATTGGAGGTTGGGTTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS CCA 90 bp | TGGTTTGACCATGGAGACGGCAGAGGTGTAACGTTCCAAGACAGGTaGAAACCCAACCTCCAATTGGGCTTTCAGGTGACCCTTACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WFDHGDGRGVTFQDR*KPNLQLGFQVTLTA Trigger: AGCCGTAAGGGTCACCTGAAAGCCCAATTGGAGGTTGGGTTTCCACCTGTCTTGGAACGTTACACCTCTGCCGTCTCCATGGTCAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS CCA 90 bp | ACTACCAGTGACTTCTTACACCACGGCACGAACTCTCGGTACTCCTaGACGTTGGACACCACCTCAAACATCTCCTGCATTGAGTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTSDFLHHGTNSRYS*TLDTTSNISCIEYP Trigger: GGGGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCACTGGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTTTGACCATGTGTGGTTaGACCATGGAGACGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLSAFSSSALWRCGKAALTMCG*TMETAE Trigger: CTCTGCCGTCTCCATGGTCAAACCACACATGGTCAA...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGTTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTAAGTGGTTGAAGAGCTaGCCGTCAGTGCAAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLSAFSSSALWRCGKAAKWLKS*PSVQTA Trigger: GGCTGTTTGCACTGACGGCAAGCTCTTCAACCACTT...AGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAACAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTGGGAGTGGAGCAGAGAGCGAAACTCAAAGGAAATCGAGAAGTCCACAAAGTGGTTGAAGAGCTaGCCGTCAGTGCAAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASWEWSRERNSKEIEKSTKWLKS*PSVQTA Trigger: GGCTGTTTGCACTGACGGCAAGCTCTTCAACCACTT...TGTGGACTTCTCGATTTCCTTTGAGTTTCGCTCTCTGCTCCACTCCCAGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218507.2 |
||
| CDS-3UTR CAA 90 bp | CATGGATGTGTTCCTAAACTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCGTTTCTGGACCAAACTaGGTTGCTGCCCGGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HGCVPKLRQAAFSPEKLSVSGPN*VAARRS Trigger: TGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAAC...GCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAGTTTAGGAACACATCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS CCA 90 bp | GTGACTTCTTACACCACGGCACGAACTCTCGGTACTCCTGGACGTTaGACACCACCTCAAACATCTCCTGCATTGAGTACCTACAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTSYTTARTLGTPGR*TPPQTSPALSTYSK Trigger: CTTGCTGTAGGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
||
| CDS CCA 90 bp | TTGGTGCACTTCATGAAACATGAGTTCACGGGGGATGGCTGTTTCTaGACCAAACTTGGTTGCTGCCCGGCGCTCAAAGGCAGCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: LVHFMKHEFTGDGCF*TKLGCCPALKGSNI Trigger: AATGTTGCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTCATGTTTCATGAAGTGCACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGCTTTCTCCTCCTCTGCTCTGTGGCGCTGTGGTAAAGCAGCTCCTCACCAAACATCTCCTGCATaGAGTACCTACAGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAFSSSALWRCGKAAPHQTSPA*STYSKR Trigger: CCTCTTGCTGTAGGTACTCAATGCAGGAGATGTTTG...GTGAGGAGCTGCTTTACCACAGCGCCACAGAGCAGAGGAGGAGAAAGCACTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
||
| CDS-3UTR CAA 90 bp | CTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCAGGGTAAAGGCTTCTTGCAAACCCAACCTCCAATaGGGCTTTCAGGTGACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRQAAFSPEKLSRVKASCKPNLQ*GFQVTL Trigger: AAGGGTCACCTGAAAGCCCAATTGGAGGTTGGGTTT...GCAAGAAGCCTTTACCCTGCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTCCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGTTGACCATGTGTGGTTaGACCATGGAGACGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: AAPHLLPVRQHGCVPKLRLTMCG*TMETAE Trigger: CTCTGCCGTCTCCATGGTCAAACCACACATGGTCAA...CCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGGAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | CCTCACCTTCTACCTGTCAGACAGCATGGATGTGTTCCTAAACTGAGGCAGGCTTTGACCATGTGTGGTTaGACCATGGAGACGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PHLLPVRQHGCVPKLRQALTMCG*TMETAE Trigger: CTCTGCCGTCTCCATGGTCAAACCACACATGGTCAA...AGCCTGCCTCAGTTTAGGAACACATCCATGCTGTCTGACAGGTAGAAGGTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | TCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCAAGTGGTTGAAGAGCTaGCCGTCAGTGCAAACAGCC | + |
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Preference number: 5 (lower is better) Translates to: SVSLPFLLSFLCSDSMQPKWLKS*PSVQTA Trigger: GGCTGTTTGCACTGACGGCAAGCTCTTCAACCACTT...GGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS GCA 90 bp | AAACATGAGTTCACGGGGGATGGCTGTTTCTGGACCAAACTTGGTTaGTGCCCGGCGCTCAAAGGCAGCAACATTCTGTTTTACAACCTC | + |
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Preference number: 5 (lower is better) Translates to: KHEFTGDGCFWTKLG*CPALKGSNILFYNL Trigger: GAGGTTGTAAAACAGAATGTTGCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTCATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CCA 90 bp | ACTACCAGTGACTTCTTACACCACGGCACGAACTCTCGGTACTCCTaGACGTTGGACACCACCTCAAACATCTCCTGCATTGAGTACCTA | + |
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Preference number: 5 (lower is better) Translates to: TTSDFLHHGTNSRYS*TLDTTSNISCIEYL Trigger: TAGGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCACTGGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
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| CDS-3UTR CAA 90 bp | TCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAGACAGCATGCAGCCCAAACCCAACCTCCAATaGGGCTTTCAGGTGACCCTT | + |
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Preference number: 5 (lower is better) Translates to: SVSLPFLLSFLCSDSMQPKPNLQ*GFQVTL Trigger: AAGGGTCACCTGAAAGCCCAATTGGAGGTTGGGTTT...GGGCTGCATGCTGTCTGAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | CATGGATGTGTTCCTAAACTGAGGCAGGCTGCCTTTTCTCCTGAGAAGCTTAGCAAGTGGTTGAAGAGCTaGCCGTCAGTGCAAACAGCC | + |
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Preference number: 5 (lower is better) Translates to: HGCVPKLRQAAFSPEKLSKWLKS*PSVQTA Trigger: GGCTGTTTGCACTGACGGCAAGCTCTTCAACCACTT...GCTAAGCTTCTCAGGAGAAAAGGCAGCCTGCCTCAGTTTAGGAACACATCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | GCTAGCCAGTATCTCTGTGTCAGGAAGTTACTACTGTATTCCCCCGACCAGGCAATAGTCTCTAAGTGGTaGAAGAGCTTGCCGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ASQYLCVRKLLLYSPDQAIVSKW*KSLPSV Trigger: CACTGACGGCAAGCTCTTCAACCACTTAGAGACTAT...TGCCTGGTCGGGGGAATACAGTAGTAACTTCCTGACACAGAGATACTGGCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | GTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTCCTGTGCTCAAACCCAACCTCCAATaGGGCTTTCAGGTGACCCTT | + |
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Preference number: 5 (lower is better) Translates to: VPDTFFCLTSIPAIFPVLKPNLQ*GFQVTL Trigger: AAGGGTCACCTGAAAGCCCAATTGGAGGTTGGGTTT...GAGCACAGGAAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTGTTTCTGGACCAAACTaGGTTGCTGCCCGGCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FQNVPDTFFCLTSIPAIFVSGPN*VAARRS Trigger: TGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAAC...AAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | TGTGAGGCTTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGATAGTCTCTAAGTGGTaGAAGAGCTTGCCGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: CEAFRMYLTLSSVSLPFLIVSKW*KSLPSV Trigger: CACTGACGGCAAGCTCTTCAACCACTTAGAGACTAT...CAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAAGCCTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGAATGTACCTGACACTTTCTTCTGTCTCACTTCCATTCCTGCTATCTTTATAGTCTCTAAGTGGTaGAAGAGCTTGCCGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: FQNVPDTFFCLTSIPAIFIVSKW*KSLPSV Trigger: CACTGACGGCAAGCTCTTCAACCACTTAGAGACTAT...AAAGATAGCAGGAATGGAAGTGAGACAGAAGAAAGTGTCAGGTACATTCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CAA 72 bp | GTTCACGGGGGATGGCTGTTTCTGGACCAAACTTGGTaGCTGCCCGGCGCTCAAAGGCAGCAACATTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VHGGWLFLDQTW*LPGAQRQQHSV Trigger: AACAGAATGTTGCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CAA 72 bp | ATGAGTTCACGGGGGATGGCTGTTTCTGGACCAAACTaGGTTGCTGCCCGGCGCTCAAAGGCAGCAACATTC | + |
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Preference number: 6 (lower is better) Translates to: MSSRGMAVSGPN*VAARRSKAATF Trigger: GAATGTTGCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS TCA 72 bp | ACCTACAGCAAGAGGAATCAGAGGCCGAGGAACCCATaGTCCTACGCTCCGAGTAAGCCTTTCGCTTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: TYSKRNQRPRNP*SYAPSKPFACW Trigger: CCAACAAGCGAAAGGCTTACTCGGAGCGTAGGATCATGGGTTCCTCGGCCTCTGATTCCTCTTGCTGTAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
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| CDS TCA 72 bp | GGCTTTCAGGTGACCCTTACGGCTGGATACTACCAGTaGCTTCTTACACCACGGCACGAACTCTCGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: GFQVTLTAGYYQ*LLTPRHELSVL Trigger: GAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACCTGAAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS GCA 72 bp | ACGGGGGATGGCTGTTTCTGGACCAAACTTGGTTGCTaGCCGGCGCTCAAAGGCAGCAACATTCTGTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: TGDGCFWTKLGC*PALKGSNILFY Trigger: GTAAAACAGAATGTTGCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS GCA 72 bp | TTCACGGGGGATGGCTGTTTCTGGACCAAACTTGGTTaGTGCCCGGCGCTCAAAGGCAGCAACATTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: FTGDGCFWTKLG*CPALKGSNILF Trigger: AAACAGAATGTTGCTGCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CCA 72 bp | TACACCACGGCACGAACTCTCGGTACTCCTGGACGTTaGACACCACCTCAAACATCTCCTGCATTGAGTACC | + |
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Preference number: 6 (lower is better) Translates to: YTTARTLGTPGR*TPPQTSPALST Trigger: GGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043211.7 ENSMUST00000219815.2 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CCA 72 bp | CATGGAGACGGCAGAGGTGTAACGTTCCAAGACAGGTaGAAACCCAACCTCCAATTGGGCTTTCAGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: HGDGRGVTFQDR*KPNLQLGFQVT Trigger: GGTCACCTGAAAGCCCAATTGGAGGTTGGGTTTCCACCTGTCTTGGAACGTTACACCTCTGCCGTCTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CCA 72 bp | GAGCTTGCCGTCAGTGCAAACAGCCTTGACCATGTGTaGTTTGACCATGGAGACGGCAGAGGTGTAACGTTC | + |
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Preference number: 6 (lower is better) Translates to: ELAVSANSLDHV*FDHGDGRGVTF Trigger: GAACGTTACACCTCTGCCGTCTCCATGGTCAAACCACACATGGTCAAGGCTGTTTGCACTGACGGCAAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CCA 72 bp | TTCATGAAACATGAGTTCACGGGGGATGGCTGTTTCTaGACCAAACTTGGTTGCTGCCCGGCGCTCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FMKHEFTGDGCF*TKLGCCPALKG Trigger: GCCTTTGAGCGCCGGGCAGCAACCAAGTTTGGTCCAGAAACAGCCATCCCCCGTGAACTCATGTTTCATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CCA 72 bp | GACTTCTTACACCACGGCACGAACTCTCGGTACTCCTaGACGTTGGACACCACCTCAAACATCTCCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: DFLHHGTNSRYS*TLDTTSNISCI Trigger: AATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043211.7 ENSMUST00000219815.2 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CCA 72 bp | CAACCTCCAATTGGGCTTTCAGGTGACCCTTACGGCTaGATACTACCAGTGACTTCTTACACCACGGCACGA | + |
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Preference number: 6 (lower is better) Translates to: QPPIGLSGDPYG*ILPVTSYTTAR Trigger: TCGTGCCGTGGTGTAAGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACCTGAAAGCCCAATTGGAGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CAA 72 bp | TTACACCACGGCACGAACTCTCGGTACTCCTGGACGTaGGACACCACCTCAAACATCTCCTGCATTGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: LHHGTNSRYSWT*DTTSNISCIEY Trigger: GTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043211.7 ENSMUST00000219815.2 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CAA 90 bp | AGTGACTTCTTACACCACGGCACGAACTCTCGGTACTCCTGGACGTaGGACACCACCTCAAACATCTCCTGCATTGAGTACCCCATGATC | + |
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Preference number: 6 (lower is better) Translates to: SDFLHHGTNSRYSWT*DTTSNISCIEYPMI Trigger: GATCATGGGGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CAA 90 bp | AGTGACTTCTTACACCACGGCACGAACTCTCGGTACTCCTGGACGTaGGACACCACCTCAAACATCTCCTGCATTGAGTACCTACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SDFLHHGTNSRYSWT*DTTSNISCIEYLQQ Trigger: TTGCTGTAGGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTACCGAGAGTTCGTGCCGTGGTGTAAGAAGTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
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| CDS GCA 72 bp | TACTCCTGGACGTTGGACACCACCTCAAACATCTCCTaGATTGAGTACCTACAGCAAGAGGAATCAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: YSWTLDTTSNIS*IEYLQQEESEA Trigger: GGCCTCTGATTCCTCTTGCTGTAGGTACTCAATGCAGGAGATGTTTGAGGTGGTGTCCAACGTCCAGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043211.7 |
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| CDS TCA 72 bp | ACAGGTGGAAACCCAACCTCCAATTGGGCTTTCAGGTaGCCCTTACGGCTGGATACTACCAGTGACTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: TGGNPTSNWAFR*PLRLDTTSDFL Trigger: TAAGAAGTCACTGGTAGTATCCAGCCGTAAGGGTCACCTGAAAGCCCAATTGGAGGTTGGGTTTCCACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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| CDS CAA 72 bp | CTGAATCTCCAAATAGTCTCTAAGTGGTTGAAGAGCTaGCCGTCAGTGCAAACAGCCTTGACCATGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LNLQIVSKWLKS*PSVQTALTMCG Trigger: ACCACACATGGTCAAGGCTGTTTGCACTGACGGCAAGCTCTTCAACCACTTAGAGACTATTTGGAGATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043211.7 ENSMUST00000220027.2 ENSMUST00000220227.2 |
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