Pregenerated sensors for COPZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060992Ensembl transcript IDs: ENSMUST00000100162.5, ENSMUST00000229549.2, ENSMUST00000230893.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCGCACAGCAGCGTACAAGGTGGACTTCGCCTGACTCCATTTCTTaGAGAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTGCATGGGC | + |
|
Preference number: 1 (lower is better) Translates to: AAQQRTRWTSPDSIS*RGRLQSAHFSQCMG Trigger: GCCCATGCACTGGCTGAAGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACCTTGTACGCTGCTGTGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR GCA 90 bp | AAGCCTGGCTTGGGAGGATCCGTGGAGAGATGGGATACACATCCCTaGTTACCCTCAAAGCCACCCGGTGCACCACTTGCTGGGGGTCGC | + |
|
Preference number: 1 (lower is better) Translates to: KPGLGGSVERWDTHP*LPSKPPGAPLAGGR Trigger: GCGACCCCCAGCAAGTGGTGCACCGGGTGGCTTTGAGGGTAAGCAGGGATGTGTATCCCATCTCTCCACGGATCCTCCCAAGCCAGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR TCA 90 bp | ACTGAGGTATCAAGCAGGGAAGGTCTGAAGGGTACAGAGCAAGGCTaGCAGTCCAGATCACAGTCAGGGAGACAGGGGAGCCGAGGACAC | + |
|
Preference number: 1 (lower is better) Translates to: TEVSSREGLKGTEQG*QSRSQSGRQGSRGH Trigger: GTGTCCTCGGCTCCCCTGTCTCCCTGACTGTGATCTGGACTGTCAGCCTTGCTCTGTACCCTTCAGACCTTCCCTGCTTGATACCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR TCA 90 bp | ACTTTATTCCTAAGCCGCACAGCAGCGTACAAGGTGGACTTCGCCTaGCTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: TLFLSRTAAYKVDFA*LHFLQRPPPVCPLQ Trigger: CTGAAGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACCTTGTACGCTGCTGTGCGGCTTAGGAATAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR GCA 90 bp | GGATACACATCCCTGCTTACCCTCAAAGCCACCCGGTGCACCACTTaGTGGGGGTCGCTCTCTAGGATCACCCCTCCATCTACAATTTCA | + |
|
Preference number: 1 (lower is better) Translates to: GYTSLLTLKATRCTT*WGSLSRITPPSTIS Trigger: TGAAATTGTAGATGGAGGGGTGATCCTAGAGAGCGACCCCCAGCAAGTGGTGCACCGGGTGGCTTTGAGGGTAAGCAGGGATGTGTATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR CCA 90 bp | TACACATCCCTGCTTACCCTCAAAGCCACCCGGTGCACCACTTGCTaGGGGTCGCTCTCTAGGATCACCCCTCCATCTACAATTTCATCC | + |
|
Preference number: 1 (lower is better) Translates to: YTSLLTLKATRCTTC*GSLSRITPPSTISS Trigger: GGATGAAATTGTAGATGGAGGGGTGATCCTAGAGAGCGACCCCCAGCAAGTGGTGCACCGGGTGGCTTTGAGGGTAAGCAGGGATGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR TCA 90 bp | CCAGATCACAGTCAGGGAGACAGGGGAGCCGAGGACACTGTACAATaGGTCCCAGTGCTCTGGAATAAGAGGGAGCCAAGGAAGCTAACT | + |
|
Preference number: 1 (lower is better) Translates to: PDHSQGDRGAEDTVQ*VPVLWNKREPRKLT Trigger: AGTTAGCTTCCTTGGCTCCCTCTTATTCCAGAGCACTGGGACTCATTGTACAGTGTCCTCGGCTCCCCTGTCTCCCTGACTGTGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR TCA 90 bp | GGGACTAAAGTAGTTTGGGTTCCAAGGTCTGGCTTTGCTCCAGGGTaGCAGAGGCCACAGGCAATGATCTCACAGGTTCTACAGGCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: GTKVVWVPRSGFAPG*QRPQAMISQVLQAE Trigger: CTCTGCCTGTAGAACCTGTGAGATCATTGCCTGTGGCCTCTGTCACCCTGGAGCAAAGCCAGACCTTGGAACCCAAACTACTTTAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CCA 90 bp | GAGGCCACAGGCAATGATCTCACAGGTTCTACAGGCAGAGAGGTGTaGTACAGGCCTAGAGAGATGTTCTCAGGACCATGTGCAGGTACA | + |
|
Preference number: 1 (lower is better) Translates to: EATGNDLTGSTGREV*YRPREMFSGPCAGT Trigger: TGTACCTGCACATGGTCCTGAGAACATCTCTCTAGGCCTGTACCACACCTCTCTGCCTGTAGAACCTGTGAGATCATTGCCTGTGGCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CCA 90 bp | AACCCACTTGTGCTGAAGTTAGGAGTCCTCCATTTGCTGGCTATATaGGCTGCTGGGATGAGGGCCCTTAAGGCACAGGGAAGAAAACAC | + |
|
Preference number: 1 (lower is better) Translates to: NPLVLKLGVLHLLAI*AAGMRALKAQGRKH Trigger: GTGTTTTCTTCCCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAGGACTCCTAACTTCAGCACAAGTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR TCA 90 bp | ACAGACCATCTGCTTAAGGCAAGCCTCTGCTGGGGAATAAATCACTaGCTGACTGAGGTATCAAGCAGGGAAGGTCTGAAGGGTACAGAG | + |
|
Preference number: 1 (lower is better) Translates to: TDHLLKASLCWGINH*LTEVSSREGLKGTE Trigger: CTCTGTACCCTTCAGACCTTCCCTGCTTGATACCTCAGTCAGTCAGTGATTTATTCCCCAGCAGAGGCTTGCCTTAAGCAGATGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR CCA 90 bp | CGTTATAGAGAGGGAATTACACATCCAGATGTTGAGGGCTCCTACTaGGCAAAACCAGAACCACTTCCATGTAGGCCTCCAGGTCAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: RYREGITHPDVEGSY*AKPEPLPCRPPGQA Trigger: TGCTTGACCTGGAGGCCTACATGGAAGTGGTTCTGGTTTTGCCCAGTAGGAGCCCTCAACATCTGGATGTGTAATTCCCTCTCTATAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR TCA 90 bp | ACACGGCAAGGCCAACGTCATTACGGCTCTTTCCATCCTCAGTTCTaGGCAGAAACTTTTCTAGGGACTAAAGTAGTTTGGGTTCCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: TRQGQRHYGSFHPQF*AETFLGTKVVWVPR Trigger: CCTTGGAACCCAAACTACTTTAGTCCCTAGAAAAGTTTCTGCTCAGAACTGAGGATGGAAAGAGCCGTAATGACGTTGGCCTTGCCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CCA 90 bp | CCTCCAGGTCAAGCAGACAATCTATCTGCAGTCAAGGTAGAAGGATaGATCTGCAAAGCCCGCATATTCCAGAATATGCATTTTCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: PPGQADNLSAVKVEG*ICKARIFQNMHFQL Trigger: GAGCTGAAAATGCATATTCTGGAATATGCGGGCTTTGCAGATCCATCCTTCTACCTTGACTGCAGATAGATTGTCTGCTTGACCTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR GCA 90 bp | GCCCTTAAGGCACAGGGAAGAAAACACTCAGCACATTCTTTCTCTTaGTTTGATGATCTGAAGTACAGCCACAGTAAAGGGCCAAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: ALKAQGRKHSAHSFS*FDDLKYSHSKGPRN Trigger: GTTTCTTGGCCCTTTACTGTGGCTGTACTTCAGATCATCAAAGCAAGAGAAAGAATGTGCTGAGTGTTTTCTTCCCTGTGCCTTAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR GCA 90 bp | GCTCATTTTCATAGGAGCTGCCAATCACATAGAAATAGAGATCGATaGTACTTTTATAGACCACTGTCAATCCTTCCAACAGAGCGATTT | + |
|
Preference number: 1 (lower is better) Translates to: AHFHRSCQSHRNRDR*YFYRPLSILPTERF Trigger: AAATCGCTCTGTTGGAAGGATTGACAGTGGTCTATAAAAGTAGCATCGATCTCTATTTCTATGTGATTGGCAGCTCCTATGAAAATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR CAA 90 bp | GCTGACTGCAGCACCTGTGGAGACAAAGGCAGCACTGAGGGGGACTaGCAAGCCACAGGGTGTGAGCAGGCTGAGGCTCTCCTTCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: ADCSTCGDKGSTEGD*QATGCEQAEALLPH Trigger: GTGGGGAAGGAGAGCCTCAGCCTGCTCACACCCTGTGGCTTGCAAGTCCCCCTCAGTGCTGCCTTTGTCTCCACAGGTGCTGCAGTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGACAAAGGCAGCACTGAGGGGGACTTGCAAGCCACAGGGTGTGAGCAGGCTGTATGGGCTGCTGGGATaGGGGCCCTTAAGGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ETKAALRGTCKPQGVSRLYGLLG*GPLRHR Trigger: CCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATA...CAGCCTGCTCACACCCTGTGGCTTGCAAGTCCCCCTCAGTGCTGCCTTTGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCGCACAGCAGCGTACAAGGTGGACTTCGCCTGACTCCATTTCTTGCAGAGGCTATGGGCTGCTGGGATaGGGGCCCTTAAGGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: AAQQRTRWTSPDSISCRGYGLLG*GPLRHR Trigger: CCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATA...GCCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACCTTGTACGCTGCTGTGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | CGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTTCCAAGGTCTGGCTTTaGTCCAGGGTGACAGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RLTPFLAEAASSLPTSASSKVWL*SRVTEA Trigger: GGCCTCTGTCACCCTGGAGCAAAGCCAGACCTTGGA...ACTGGCTGAAGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGGGAGGCTTTGCTCCAGGGTaGCAGAGGCCACAGGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: LHLLAIWAAGMRALKAQGGFAPG*QRPQAM Trigger: CATTGCCTGTGGCCTCTGTCACCCTGGAGCAAAGCC...TCCCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGGGAAGGCCGCCTCCAGTCTaGCCACTTCAGCCAGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: LHLLAIWAAGMRALKAQGRPPPV*PLQPVH Trigger: ATGCACTGGCTGAAGTGGGCAGACTGGAGGCGGCCT...TCCCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGCCTGGCTTGGGAGGATCCGTGGAGAGATGGGATACACATCCCTGCTTACCGGTGCACCACTTGCTaGGGGTCGCTCTCTAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: ASLAWEDPWRDGIHIPAYRCTTC*GSLSRI Trigger: GATCCTAGAGAGCGACCCCCAGCAAGTGGTGCACCG...GTAAGCAGGGATGTGTATCCCATCTCTCCACGGATCCTCCCAAGCCAGGCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCAACGTCATTACGGGCTTTGCTCCAGGGTaGCAGAGGCCACAGGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: ICECGAEEKEHGKANVITGFAPG*QRPQAM Trigger: CATTGCCTGTGGCCTCTGTCACCCTGGAGCAAAGCC...CGTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTGCATGGGCCAGAATGCTTGCTCATAAGTTGGGGGCCTaGATAAGAAGTCACAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: EAASSLPTSASAWARMLAHKLGA*IRSHSR Trigger: TCTGCTGTGACTTCTTATCCAGGCCCCCAACTTATG...AGCAAGCATTCTGGCCCATGCACTGGCTGAAGTGGGCAGACTGGAGGCGGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTCCATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGAAGGTGGACTTCGCCTaGCTCCATTTCTTGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLHLLAIWAAGMRALKAQKVDFA*LHFLQR Trigger: CCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACCTT...CTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGCAGCACTGAGGGGGACTTGCAAGCCACAGGGTGTGAGCAGGCTGAGGGTCAAGGTAGAAGGATaGATCTGCAAAGCCCGCATA | + |
|
Preference number: 2 (lower is better) Translates to: TKAALRGTCKPQGVSRLRVKVEG*ICKARI Trigger: TATGCGGGCTTTGCAGATCCATCCTTCTACCTTGAC...CCTCAGCCTGCTCACACCCTGTGGCTTGCAAGTCCCCCTCAGTGCTGCCTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGGAGAAGGAACACGGCAAGGCCAACGTCATTACGGCTCTTTCCATCCTCAAGCAGATGTGGGTTTTaGGGGGCAAGGAACTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LRRRNTARPTSLRLFPSSSRCGF*GARNWA Trigger: AGCCCAGTTCCTTGCCCCTCAAAACCCACATCTGCT...TGAGGATGGAAAGAGCCGTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTATCAAGCAGGGAAGGTCTGAAGGGTACAGAGCAAGGCTGACAGTCCAGATCAGCAGATGTGGGTTTTaGGGGGCAAGGAACTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GIKQGRSEGYRARLTVQISRCGF*GARNWA Trigger: AGCCCAGTTCCTTGCCCCTCAAAACCCACATCTGCT...GATCTGGACTGTCAGCCTTGCTCTGTACCCTTCAGACCTTCCCTGCTTGATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGGGAAGAGGGACTTTACTCTCATaGGAGGGAGGGGAAAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: HLLAIWAAGMRALKAQGRGTLLS*EGGERT Trigger: GGTTCTTTCCCCTCCCTCTCATGAGAGTAAAGTCCC...TCTTCCCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | CGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTTTCCATCCTCAGTTCTaGGCAGAAACTTTTCTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RLTPFLAEAASSLPTSASFHPQF*AETFLG Trigger: CCCTAGAAAAGTTTCTGCTCAGAACTGAGGATGGAA...ACTGGCTGAAGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGCAACATTACACCCAAGAACGGGAATCCAAGCCTCAGAGGAAAGGTACTGTCCAAGGTCTGGCTTTaGTCCAGGGTGACAGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GSNITPKNGNPSLRGKVLSKVWL*SRVTEA Trigger: GGCCTCTGTCACCCTGGAGCAAAGCCAGACCTTGGA...CAGTACCTTTCCTCTGAGGCTTGGATTCCCGTTCTTGGGTGTAATGTTGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAAAGGCAGCACTGAGGGGGACTTGCAAGCCACAGGGTGTGAGCAGGCTGAGAAAGAGAAGTGTGTaGTCACATGCACACAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: ETKAALRGTCKPQGVSRLRKRSV*SHAHRP Trigger: TGGTCTGTGTGCATGTGAGCACACACTTCTCTTTCT...CAGCCTGCTCACACCCTGTGGCTTGCAAGTCCCCCTCAGTGCTGCCTTTGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGGGAAGAAAACCAAGGAGAGAATaGGGGGTGGGCGAGACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HLLAIWAAGMRALKAQGRKPRRE*GVGETS Trigger: ACTTGTCTCGCCCACCCCCCATTCTCTCCTTGGTTT...TCTTCCCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGACTTCGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTGGGACTAAAGTAGTTTaGGTTCCAAGGTCTGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGLRLTPFLAEAASSLPTGTKVV*VPRSGF Trigger: AAAGCCAGACCTTGGAACCCAAACTACTTTAGTCCC...AGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGCAGAGAAATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCGGGACTTTACTCTCATaGGAGGGAGGGGAAAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: QSREICECGAEEKEHGKAGTLLS*EGGERT Trigger: GGTTCTTTCCCCTCCCTCTCATGAGAGTAAAGTCCC...GGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATATTTCTCTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CAA 90 bp | AGGCCTAGAGAGATGTTCTCAGGACCATGTGCAGGTACAGCAGCTTaGAGGCTAAAGGCCAGATCAAAGTTGAGGCTGAGGGGACTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPREMFSGPCAGTAA*RLKARSKLRLRGLA Trigger: AGCTAGTCCCCTCAGCCTCAACTTTGATCTGGCCTTTAGCCTCAAAGCTGCTGTACCTGCACATGGTCCTGAGAACATCTCTCTAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCAACGTCATTACGAGGAAGGAGAGAAGCTaGGGCAAAGAAAGTATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ICECGAEEKEHGKANVITRKERS*GKESMA Trigger: GGCCATACTTTCTTTGCCTCAGCTTCTCTCCTTCCT...CGTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGTCCTCCATTTCCAGGGAAGACTGATGCAGAGAGGGGGAACTCAACAACATGCACACAGACCATCTaGTTAAGGCAAGCCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PGPPFPGKTDAERGNSTTCTQTI*LRQASA Trigger: AGCAGAGGCTTGCCTTAAGCAGATGGTCTGTGTGCA...TGTTGTTGAGTTCCCCCTCTCTGCATCAGTCTTCCCTGGAAATGGAGGACCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGGGAGGGACTAAAGTAGTTTaGGTTCCAAGGTCTGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LHLLAIWAAGMRALKAQGGTKVV*VPRSGF Trigger: AAAGCCAGACCTTGGAACCCAAACTACTTTAGTCCC...TCCCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGCAACATTACACCCAAGAACGGGAATCCAAGCCTCAGAGGAAAGGTACTGAGGAAGGAGAGAAGCTaGGGCAAAGAAAGTATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GSNITPKNGNPSLRGKVLRKERS*GKESMA Trigger: GGCCATACTTTCTTTGCCTCAGCTTCTCTCCTTCCT...CAGTACCTTTCCTCTGAGGCTTGGATTCCCGTTCTTGGGTGTAATGTTGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGACTTCGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTGCACATTCTTTCTCTTaGTTTGATGATCTGAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: GGLRLTPFLAEAASSLPTAHSFS*FDDLKY Trigger: GTACTTCAGATCATCAAAGCAAGAGAAAGAATGTGC...AGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGACTAGCTCCAAGGGCCTTTAAATCACTGTTCCTCTGCAGCTTGTCCCTTGAGGCAAAGAAAGTATaGCCTCTGCCACTCCAAACC | + |
|
Preference number: 2 (lower is better) Translates to: RGLAPRAFKSLFLCSLSLEAKKV*PLPLQT Trigger: GGTTTGGAGTGGCAGAGGCCATACTTTCTTTGCCTC...AAGGGACAAGCTGCAGAGGAACAGTGATTTAAAGGCCCTTGGAGCTAGTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGTTCTACAGGCAGAGAGGTGTGGTACAGGCCTAGAGAGATGTTCTCAGGAGAGGCAAAGAAAGTATaGCCTCTGCCACTCCAAACC | + |
|
Preference number: 2 (lower is better) Translates to: TGSTGREVWYRPREMFSGEAKKV*PLPLQT Trigger: GGTTTGGAGTGGCAGAGGCCATACTTTCTTTGCCTC...TCCTGAGAACATCTCTCTAGGCCTGTACCACACCTCTCTGCCTGTAGAACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTGGGAGGATCCGTGGAGAGATGGGATACACATCCCTGCTTACCCTCAAATTTTTCCTCAGCATCTaGCTCAGGGAATCGAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: WLGRIRGEMGYTSLLTLKFFLSI*LRESKR Trigger: CCTCTTCGATTCCCTGAGCCAGATGCTGAGGAAAAA...TTTGAGGGTAAGCAGGGATGTGTATCCCATCTCTCCACGGATCCTCCCAAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTTAGGAGTCCTCCATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTCTTGCTTTGATGATCTaGAGTACAGCCACAGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EVRSPPFAGYMGCWDEGPLALMI*STATVK Trigger: CTTTACTGTGGCTGTACTTCAGATCATCAAAGCAAG...AGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAGGACTCCTAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCAACGTCATTACGTTCCATCCTCAGTTCTaGGCAGAAACTTTTCTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ICECGAEEKEHGKANVITFHPQF*AETFLG Trigger: CCCTAGAAAAGTTTCTGCTCAGAACTGAGGATGGAA...CGTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGCAGAGAAATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCAAGTGTGTGCTCACATaGACACAGACCATCTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QSREICECGAEEKEHGKAKCVLT*TQTICL Trigger: TAAGCAGATGGTCTGTGTGCATGTGAGCACACACTT...GGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATATTTCTCTGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGCAACATTACACCCAAGAACGGGAATCCAAGCCTCAGAGGAAAGGTACTGCATAAGTTGGGGGCCTaGATAAGAAGTCACAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSNITPKNGNPSLRGKVLHKLGA*IRSHSR Trigger: TCTGCTGTGACTTCTTATCCAGGCCCCCAACTTATG...CAGTACCTTTCCTCTGAGGCTTGGATTCCCGTTCTTGGGTGTAATGTTGCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCAACGTCATTACGCGAATTCAAATCCACTaGGGGGATGAAGAGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ICECGAEEKEHGKANVITRIQIH*GDEERR Trigger: TCTTCTCTCTTCATCCCCCCAGTGGATTTGAATTCG...CGTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGATGCAGAGAGGGGGAACTCAACAACAGATTGTAGAACCAAAGCAGAGAAATACAGGCAGAGAGGTGTaGTACAGGCCTAGAGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: LMQRGGTQQQIVEPKQRNTGREV*YRPREM Trigger: CATCTCTCTAGGCCTGTACCACACCTCTCTGCCTGT...ATTTCTCTGCTTTGGTTCTACAATCTGTTGTTGAGTTCCCCCTCTCTGCATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCTATCTGCAGTCAAGGTAGAAGGATGGATCTGCAAAGCCCGCATATTCCAGGCTAGTCTGTCCATGTaGAGAGGAGGAAGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NLSAVKVEGWICKARIFQASLSM*RGGRRK Trigger: CTTCCTTCTTCCTCCTCTCCACATGGACAGACTAGC...CTGGAATATGCGGGCTTTGCAGATCCATCCTTCTACCTTGACTGCAGATAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAAACTTTTCTAGGGACTAAAGTAGTTTGGGTTCCAAGGTCTGGCTTTGCTGAGGACACTGTACAATaGGTCCCAGTGCTCTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: AETFLGTKVVWVPRSGFAEDTVQ*VPVLWN Trigger: ATTCCAGAGCACTGGGACTCATTGTACAGTGTCCTC...AGCAAAGCCAGACCTTGGAACCCAAACTACTTTAGTCCCTAGAAAAGTTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGATGTTCTCAGGACCATGTGCAGGTACAGCAGCTTTGAGGCTAAAGGCCAGGCACATTCTTTCTCTTaGTTTGATGATCTGAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: RDVLRTMCRYSSFEAKGQAHSFS*FDDLKY Trigger: GTACTTCAGATCATCAAAGCAAGAGAAAGAATGTGC...CTGGCCTTTAGCCTCAAAGCTGCTGTACCTGCACATGGTCCTGAGAACATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGATGCAGAGAGGGGGAACTCAACAACAGATTGTAGAACCAAAGCAGAGAAATTACAATGAGTCCCAGTaGTCTGGAATAAGAGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LMQRGGTQQQIVEPKQRNYNESQ*SGIRGS Trigger: GCTCCCTCTTATTCCAGAGCACTGGGACTCATTGTA...ATTTCTCTGCTTTGGTTCTACAATCTGTTGTTGAGTTCCCCCTCTCTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATCAAAGTTGAGGCTGAGGGGACTAGCTCCAAGGGCCTTTAAATCACTGTTCAGCAGACAATCTATCTaGAGTCAAGGTAGAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: RSKLRLRGLAPRAFKSLFSRQSI*SQGRRM Trigger: CATCCTTCTACCTTGACTGCAGATAGATTGTCTGCT...GAACAGTGATTTAAAGGCCCTTGGAGCTAGTCCCCTCAGCCTCAACTTTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTAGGATCACCCCTCCATCTACAATTTCATCCACAGCCAAGAAGAGGCCCTAGAAATAGAGATCGATaGTACTTTTATAGACCACTG | + |
|
Preference number: 2 (lower is better) Translates to: SLGSPLHLQFHPQPRRGPRNRDR*YFYRPL Trigger: CAGTGGTCTATAAAAGTAGCATCGATCTCTATTTCT...AGGGCCTCTTCTTGGCTGTGGATGAAATTGTAGATGGAGGGGTGATCCTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAAACTTTTCTAGGGACTAAAGTAGTTTGGGTTCCAAGGTCTGGCTTTGCTGCATATTCCAGAATATaGATTTTCAGCTCAGCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AETFLGTKVVWVPRSGFAAYSRI*IFSSAL Trigger: GAGGGCTGAGCTGAAAATGCATATTCTGGAATATGC...AGCAAAGCCAGACCTTGGAACCCAAACTACTTTAGTCCCTAGAAAAGTTTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTACATTTTTCCTCAGCATCTGGCTCAGGGAATCGAAGAGGCAGTTCAGAACATTTTCATAGGAGCTaGCAATCACATAGAAATAGA | + |
|
Preference number: 2 (lower is better) Translates to: FLHFSSASGSGNRRGSSEHFHRS*QSHRNR Trigger: TCTATTTCTATGTGATTGGCAGCTCCTATGAAAATG...TTCTGAACTGCCTCTTCGATTCCCTGAGCCAGATGCTGAGGAAAAATGTAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR GCA 72 bp | GCACCTGTGGAGACAAAGGCAGCACTGAGGGGGACTTaGAAGCCACAGGGTGTGAGCAGGCTGAGGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: APVETKAALRGT*KPQGVSRLRLS Trigger: GGAGAGCCTCAGCCTGCTCACACCCTGTGGCTTGCAAGTCCCCCTCAGTGCTGCCTTTGTCTCCACAGGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTGCATGGGCCAGAATGCTTGCTCAGCAGATGTGGGTTTaGAGGGGCAAGGAACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: EAASSLPTSASAWARMLAQQMWV*RGKELG Trigger: GCCCAGTTCCTTGCCCCTCAAAACCCACATCTGCTG...AGCAAGCATTCTGGCCCATGCACTGGCTGAAGTGGGCAGACTGGAGGCGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR GCA 72 bp | TCCCTGCTTACCCTCAAAGCCACCCGGTGCACCACTTaGTGGGGGTCGCTCTCTAGGATCACCCCTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SLLTLKATRCTT*WGSLSRITPPS Trigger: AGATGGAGGGGTGATCCTAGAGAGCGACCCCCAGCAAGTGGTGCACCGGGTGGCTTTGAGGGTAAGCAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR CCA 72 bp | CTGCTTACCCTCAAAGCCACCCGGTGCACCACTTGCTaGGGGTCGCTCTCTAGGATCACCCCTCCATCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LLTLKATRCTTC*GSLSRITPPST Trigger: TGTAGATGGAGGGGTGATCCTAGAGAGCGACCCCCAGCAAGTGGTGCACCGGGTGGCTTTGAGGGTAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR CCA 72 bp | CCCAGCAAGCCTGGCTTGGGAGGATCCGTGGAGAGATaGGATACACATCCCTGCTTACCCTCAAAGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PSKPGLGGSVER*DTHPCLPSKPP Trigger: GGGTGGCTTTGAGGGTAAGCAGGGATGTGTATCCCATCTCTCCACGGATCCTCCCAAGCCAGGCTTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGGCAGGTACAGCAGCTTaGAGGCTAAAGGCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SPDSISCRGRLQSAHFSQAGTAA*RLKARS Trigger: TGATCTGGCCTTTAGCCTCAAAGCTGCTGTACCTGC...CTGGCTGAAGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR TCA 72 bp | AGTCAGGGAGACAGGGGAGCCGAGGACACTGTACAATaGGTCCCAGTGCTCTGGAATAAGAGGGAGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQGDRGAEDTVQ*VPVLWNKREPR Trigger: CCTTGGCTCCCTCTTATTCCAGAGCACTGGGACTCATTGTACAGTGTCCTCGGCTCCCCTGTCTCCCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR TCA 72 bp | TCAAGCAGGGAAGGTCTGAAGGGTACAGAGCAAGGCTaGCAGTCCAGATCACAGTCAGGGAGACAGGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSREGLKGTEQG*QSRSQSGRQGS Trigger: GCTCCCCTGTCTCCCTGACTGTGATCTGGACTGTCAGCCTTGCTCTGTACCCTTCAGACCTTCCCTGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR TCA 72 bp | CTGGCTTTGCTCCAGGGTGACAGAGGCCACAGGCAATaGTCTCACAGGTTCTACAGGCAGAGAGGTGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LALLQGDRGHRQ*SHRFYRQRGVV Trigger: TACCACACCTCTCTGCCTGTAGAACCTGTGAGATCATTGCCTGTGGCCTCTGTCACCCTGGAGCAAAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACAAAGGCAGCACTGAGGGGGACTTGCAAGCCACAGGGTGTGAGCAGGCTGAGACAGAAGAATCCATaGTGGTTCTCCAAGATGACC | + |
|
Preference number: 3 (lower is better) Translates to: ETKAALRGTCKPQGVSRLRQKNP*WFSKMT Trigger: GGTCATCTTGGAGAACCACAATGGATTCTTCTGTCT...CAGCCTGCTCACACCCTGTGGCTTGCAAGTCCCCCTCAGTGCTGCCTTTGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGTGTTTCCCCTGACTCACTCAAATCTGCTGGGGACTTTACTCTCATGAGATTCCAAGGTCTGGCTTaGCTCCAGGGTGACAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EGVSPDSLKSAGDFTLMRFQGLA*LQGDRG Trigger: GCCTCTGTCACCCTGGAGCAAAGCCAGACCTTGGAA...TCTCATGAGAGTAAAGTCCCCAGCAGATTTGAGTGAGTCAGGGGAAACACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCAAAGTTGAGGCTGAGGGGACTAGCTCCAAGGGCCTTTAAATCACTGTTCCAGCAGATGTGGGTTTaGAGGGGCAAGGAACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSKLRLRGLAPRAFKSLFQQMWV*RGKELG Trigger: GCCCAGTTCCTTGCCCCTCAAAACCCACATCTGCTG...GAACAGTGATTTAAAGGCCCTTGGAGCTAGTCCCCTCAGCCTCAACTTTGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGACTAGCTCCAAGGGCCTTTAAATCACTGTTCCTCTGCAGCTTGTCCCTTTTACACATCCAGATGTaGAGGGCTCCTACTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RGLAPRAFKSLFLCSLSLLHIQM*RAPTGQ Trigger: TTGCCCAGTAGGAGCCCTCAACATCTGGATGTGTAA...AAGGGACAAGCTGCAGAGGAACAGTGATTTAAAGGCCCTTGGAGCTAGTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR TCA 72 bp | GGCAAGCCTCTGCTGGGGAATAAATCACTGACTGACTaGGGTATCAAGCAGGGAAGGTCTGAAGGGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKPLLGNKSLTD*GIKQGRSEGYR Trigger: TCTGTACCCTTCAGACCTTCCCTGCTTGATACCTCAGTCAGTCAGTGATTTATTCCCCAGCAGAGGCTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR GCA 72 bp | GGACTAGCTCCAAGGGCCTTTAAATCACTGTTCCTCTaGAGCTTGTCCCTTCCCTACAAGCTGTTCCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: GLAPRAFKSLFL*SLSLPYKLFPF Trigger: AAATGGGAACAGCTTGTAGGGAAGGGACAAGCTGCAGAGGAACAGTGATTTAAAGGCCCTTGGAGCTAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAAACTTTTCTAGGGACTAAAGTAGTTTGGGTTCCAAGGTCTGGCTTTGCTAAGGCCAGATCAAAGTaGAGGCTGAGGGGACTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AETFLGTKVVWVPRSGFAKARSK*RLRGLA Trigger: AGCTAGTCCCCTCAGCCTCAACTTTGATCTGGCCTT...AGCAAAGCCAGACCTTGGAACCCAAACTACTTTAGTCCCTAGAAAAGTTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGATCTGAAGTACAGCCACAGTAAAGGGCCAAGAAACCAAGGAGAGAATGGGAGACAGAAGAATCCATaGTGGTTCTCCAAGATGACC | + |
|
Preference number: 3 (lower is better) Translates to: DDLKYSHSKGPRNQGENGRQKNP*WFSKMT Trigger: GGTCATCTTGGAGAACCACAATGGATTCTTCTGTCT...CCCATTCTCTCCTTGGTTTCTTGGCCCTTTACTGTGGCTGTACTTCAGATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCAAAGCTCGCTTTTCTACATTTTTCCTCAGCATCTGGCTCAGGGAATCGTTTCTGAAGAGTTTATaGTATGAGGGGAGGAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSKARFSTFFLSIWLRESFLKSL*YEGRRG Trigger: TCCCCTCCTCCCCTCATACAATAAACTCTTCAGAAA...CGATTCCCTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCTTTGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR TCA 72 bp | GGCCAACGTCATTACGGCTCTTTCCATCCTCAGTTCTaGGCAGAAACTTTTCTAGGGACTAAAGTAGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GQRHYGSFHPQF*AETFLGTKVVW Trigger: CCAAACTACTTTAGTCCCTAGAAAAGTTTCTGCTCAGAACTGAGGATGGAAAGAGCCGTAATGACGTTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CCA 72 bp | CAAGCAGACAATCTATCTGCAGTCAAGGTAGAAGGATaGATCTGCAAAGCCCGCATATTCCAGAATATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QADNLSAVKVEG*ICKARIFQNMH Trigger: ATGCATATTCTGGAATATGCGGGCTTTGCAGATCCATCCTTCTACCTTGACTGCAGATAGATTGTCTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR GCA 72 bp | GACAATCTATCTGCAGTCAAGGTAGAAGGATGGATCTaGAAAGCCCGCATATTCCAGAATATGCATTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DNLSAVKVEGWI*KARIFQNMHFQ Trigger: CTGAAAATGCATATTCTGGAATATGCGGGCTTTGCAGATCCATCCTTCTACCTTGACTGCAGATAGATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| 3UTR TCA 72 bp | TTCCAACAGAGCGATTTCACCTCCCTATTACATTTCTaGAGAGTTTATTGTATGAGGGGAGGAGGGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FQQSDFTSLLHF*RVYCMRGGGEK Trigger: TTTTTCCCCTCCTCCCCTCATACAATAAACTCTTCAGAAATGTAATAGGGAGGTGAAATCGCTCTGTTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| 3UTR GCA 72 bp | CATAGGAGCTGCCAATCACATAGAAATAGAGATCGATaGTACTTTTATAGACCACTGTCAATCCTTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: HRSCQSHRNRDR*YFYRPLSILPT Trigger: TGTTGGAAGGATTGACAGTGGTCTATAAAAGTAGCATCGATCTCTATTTCTATGTGATTGGCAGCTCCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTGCATGGGCCAGAATGCTTGCTGCTGACTGCAGCACCTaGGACACGGTCTGCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EAASSLPTSASAWARMLAADCST*DTVCSV Trigger: TACAGAGCAGACCGTGTCTCAGGTGCTGCAGTCAGC...AGCAAGCATTCTGGCCCATGCACTGGCTGAAGTGGGCAGACTGGAGGCGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100162.5 |
||
| CDS-3UTR CCA 90 bp | CGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTCGGTGCACCACTTGCTaGGGGTCGCTCTCTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RLTPFLAEAASSLPTSASRCTTC*GSLSRI Trigger: GATCCTAGAGAGCGACCCCCAGCAAGTGGTGCACCG...ACTGGCTGAAGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CAA 72 bp | AGCACCTGTGGAGACAAAGGCAGCACTGAGGGGGACTaGCAAGCCACAGGGTGTGAGCAGGCTGAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STCGDKGSTEGD*QATGCEQAEAL Trigger: GAGAGCCTCAGCCTGCTCACACCCTGTGGCTTGCAAGTCCCCCTCAGTGCTGCCTTTGTCTCCACAGGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGATACACATCCCTGCTTACCCTCAAAGCCACCCGGTGCACCACTTGCTGGTTCCTGCAGTCCTGCTaGCACCCCCTTCCCGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MGYTSLLTLKATRCTTCWFLQSC*HPLPVV Trigger: AACCACGGGAAGGGGGTGTCAGCAGGACTGCAGGAA...CCAGCAAGTGGTGCACCGGGTGGCTTTGAGGGTAAGCAGGGATGTGTATCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR TCA 90 bp | GCCGCACAGCAGCGTACAAGGTGGACTTCGCCTGACTCCATTTCTTGCAGAGGCGAATCAGGATGGCCTTaGCAGTGTACAGGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAQQRTRWTSPDSISCRGESGWP*QCTGRA Trigger: AGCCCTCCCTGTACACTGTCAAGGCCATCCTGATTC...GCCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACCTTGTACGCTGCTGTGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR TCA 90 bp | CTCCATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGGGAGAATCAGGATGGCCTTaGCAGTGTACAGGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLLAIWAAGMRALKAQGESGWP*QCTGRA Trigger: AGCCCTCCCTGTACACTGTCAAGGCCATCCTGATTC...TCCCTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CCA 90 bp | TCGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTTCAGCCAGTTTTTCCTCAGCATCTaGCTCAGGGAATCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPDSISCRGRLQSAHFSQFFLSI*LRESKR Trigger: CCTCTTCGATTCCCTGAGCCAGATGCTGAGGAAAAA...CTGGCTGAAGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR TCA 90 bp | AGGGGACTAGCTCCAAGGGCCTTTAAATCACTGTTCCTCTGCAGCTTGTCCCTTAGGCCTTTTGCTCCTTaGCACTGGGGTAGGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLAPRAFKSLFLCSLSLRPFAP*HWGRCR Trigger: ACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCT...AAGGGACAAGCTGCAGAGGAACAGTGATTTAAAGGCCCTTGGAGCTAGTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR TCA 90 bp | ACATTTTTCCTCAGCATCTGGCTCAGGGAATCGAAGAGGCAGTTCAGAACAGCCAGGCCTTTTGCTCCTTaGCACTGGGGTAGGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TFFLSIWLRESKRQFRTARPFAP*HWGRCR Trigger: ACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCT...GGCTGTTCTGAACTGCCTCTTCGATTCCCTGAGCCAGATGCTGAGGAAAAATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAAAGCTCGCTTTTCTACATTTTTCCTCAGCATCTGGCTCAGGGAATCGGACACCCCCTTCCCGTaGTTCCCCGAAACACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSKARFSTFFLSIWLRESDTPFP*FPETQG Trigger: TCCTTGTGTTTCGGGGAACCACGGGAAGGGGGTGTC...CGATTCCCTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCTTTGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCTCAGCATCTGGCTCAGGGAATCGAAGAGGCAGTTCAGAACAGCCATAGAATCAGGATGGCCTTaGCAGTGTACAGGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FFLSIWLRESKRQFRTAIESGWP*QCTGRA Trigger: AGCCCTCCCTGTACACTGTCAAGGCCATCCTGATTC...TATGGCTGTTCTGAACTGCCTCTTCGATTCCCTGAGCCAGATGCTGAGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTCCATTTGCTGGCTATATGGGCTGCTGGGATGAGGGCCCTTAAGGCACAGTCACTATCCGTCCGATaGGTCTTGTTGAAAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLHLLAIWAAGMRALKAQSLSVR*VLLKMF Trigger: GAACATTTTCAACAAGACCCATCGGACGGATAGTGA...CTGTGCCTTAAGGGCCCTCATCCCAGCAGCCCATATAGCCAGCAAATGGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CAA 72 bp | GGTACAGCAGCTTTGAGGCTAAAGGCCAGATCAAAGTaGAGGCTGAGGGGACTAGCTCCAAGGGCCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTAALRLKARSK*RLRGLAPRAFK Trigger: TTTAAAGGCCCTTGGAGCTAGTCCCCTCAGCCTCAACTTTGATCTGGCCTTTAGCCTCAAAGCTGCTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CAA 72 bp | GAGATGTTCTCAGGACCATGTGCAGGTACAGCAGCTTaGAGGCTAAAGGCCAGATCAAAGTTGAGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EMFSGPCAGTAA*RLKARSKLRLR Trigger: CCTCAGCCTCAACTTTGATCTGGCCTTTAGCCTCAAAGCTGCTGTACCTGCACATGGTCCTGAGAACATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCAACATTACACCCAAGAACGGGAATCCAAGCCTCAGAGGAAAGGTACTTTTTTCCTCAGCATCTaGCTCAGGGAATCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: REQHYTQERESKPQRKGTFFLSI*LRESKR Trigger: CCTCTTCGATTCCCTGAGCCAGATGCTGAGGAAAAA...AGTACCTTTCCTCTGAGGCTTGGATTCCCGTTCTTGGGTGTAATGTTGCTCCCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| 3UTR CAA 72 bp | GCTCCAAGGGCCTTTAAATCACTGTTCCTCTGCAGCTaGTCCCTTCCCTACAAGCTGTTCCCATTTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: APRAFKSLFLCS*SLPYKLFPFLL Trigger: TAGAAGAAATGGGAACAGCTTGTAGGGAAGGGACAAGCTGCAGAGGAACAGTGATTTAAAGGCCCTTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGTTTCCCCTGACTCACTCAAATCTGCTGGGGACTTTACTCTCATGAGATCACTATCCGTCCGATaGGTCTTGTTGAAAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGVSPDSLKSAGDFTLMRSLSVR*VLLKMF Trigger: GAACATTTTCAACAAGACCCATCGGACGGATAGTGA...TCTCATGAGAGTAAAGTCCCCAGCAGATTTGAGTGAGTCAGGGGAAACACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCAACGTCATTACGAGAAATAGAGATCGATaGTACTTTTATAGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ICECGAEEKEHGKANVITRNRDR*YFYRPL Trigger: CAGTGGTCTATAAAAGTAGCATCGATCTCTATTTCT...CGTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGCTCGCTTTTCTACATTTTTCCTCAGCATCTGGCTCAGGGAATCGAACTACTATCCGTCCGATaGGTCTTGTTGAAAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQSSLFYIFPQHLAQGIELLSVR*VLLKMF Trigger: GAACATTTTCAACAAGACCCATCGGACGGATAGTAG...TTCGATTCCCTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCTTTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTCCAGGGAAGACTGATGCAGAGAGGGGGAACTCAACAACAGATTGTAGAAGAAATAGAGATCGATaGTACTTTTATAGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PFPGKTDAERGNSTTDCRRNRDR*YFYRPL Trigger: CAGTGGTCTATAAAAGTAGCATCGATCTCTATTTCT...TCTACAATCTGTTGTTGAGTTCCCCCTCTCTGCATCAGTCTTCCCTGGAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR GCA 90 bp | GATGATCTGAAGTACAGCCACAGTAAAGGGCCAAGAAACCAAGGAGAGAATGGGCATTTTCATAGGAGCTaGCAATCACATAGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DDLKYSHSKGPRNQGENGHFHRS*QSHRNR Trigger: TCTATTTCTATGTGATTGGCAGCTCCTATGAAAATG...CCCATTCTCTCCTTGGTTTCTTGGCCCTTTACTGTGGCTGTACTTCAGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR GCA 90 bp | AAACCAGAACCACTTCCATGTAGGCCTCCAGGTCAAGCAGACAATCTATCTGCACATTTTCATAGGAGCTaGCAATCACATAGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPEPLPCRPPGQADNLSAHFHRS*QSHRNR Trigger: TCTATTTCTATGTGATTGGCAGCTCCTATGAAAATG...TGCAGATAGATTGTCTGCTTGACCTGGAGGCCTACATGGAAGTGGTTCTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGACTTCGCCTGACTCCATTTCTTGCAGAGGCCGCCTCCAGTCTGCCCACTCTTCTCAAAGGCCTTTaGCTCCTTGACACTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGLRLTPFLAEAASSLPTLLKGL*LLDTGV Trigger: TACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAG...AGTGGGCAGACTGGAGGCGGCCTCTGCAAGAAATGGAGTCAGGCGAAGTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAAATATGTGAGTGTGGCGCTGAGGAGAAGGAACACGGCAAGGCCAACGTCAGAATCAGGATGGCCTaGACAGTGTACAGGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: REICECGAEEKEHGKANVRIRMA*TVYREG Trigger: GCCCTCCCTGTACACTGTCAAGGCCATCCTGATTCT...GACGTTGGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACATATTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCTAAAGGCCAGATCAAAGTTGAGGCTGAGGGGACTAGCTCCAAGGGCCTTAGTCGGTCTCCATCATaGTCCAGAATCAGGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAKGQIKVEAEGTSSKGLSRSPS*SRIRMA Trigger: GGCCATCCTGATTCTGGACAATGATGGAGACCGACT...AAGGCCCTTGGAGCTAGTCCCCTCAGCCTCAACTTTGATCTGGCCTTTAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | AGGATCCGTGGAGAGATGGGATACACATCCCTGCTTACCCTCAAAGCCACCCGGCTTCTCAAAGGCCTTTaGCTCCTTGACACTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RIRGEMGYTSLLTLKATRLLKGL*LLDTGV Trigger: TACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAG...CCGGGTGGCTTTGAGGGTAAGCAGGGATGTGTATCCCATCTCTCCACGGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR CAA 90 bp | TCACAGGTTCTACAGGCAGAGAGGTGTGGTACAGGCCTAGAGAGATGTTCTCAGAGAATCAGGATGGCCTaGACAGTGTACAGGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQVLQAERCGTGLERCSQRIRMA*TVYREG Trigger: GCCCTCCCTGTACACTGTCAAGGCCATCCTGATTCT...CTGAGAACATCTCTCTAGGCCTGTACCACACCTCTCTGCCTGTAGAACCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGCAAGCCTGGCTTGGGAGGATCCGTGGAGAGATGGGATACACATCCCTGCGTCCGATGGGTCTTGTaGAAAATGTTCTTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSKPGLGGSVERWDTHPCVRWVL*KMFFSK Trigger: CTTTGAGAAGAACATTTTCAACAAGACCCATCGGAC...GCAGGGATGTGTATCCCATCTCTCCACGGATCCTCCCAAGCCAGGCTTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTACATTTTTCCTCAGCATCTGGCTCAGGGAATCGAAGAGGCAGTTCAGAAAGAATCAGGATGGCCTaGACAGTGTACAGGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLHFSSASGSGNRRGSSERIRMA*TVYREG Trigger: GCCCTCCCTGTACACTGTCAAGGCCATCCTGATTCT...TTCTGAACTGCCTCTTCGATTCCCTGAGCCAGATGCTGAGGAAAAATGTAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS-3UTR CAA 90 bp | AGATCAAAGTTGAGGCTGAGGGGACTAGCTCCAAGGGCCTTTAAATCACTGTTCCTTCTCAAAGGCCTTTaGCTCCTTGACACTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSKLRLRGLAPRAFKSLFLLKGL*LLDTGV Trigger: TACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAG...GAACAGTGATTTAAAGGCCCTTGGAGCTAGTCCCCTCAGCCTCAACTTTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAGAAGGAACACGGCAAGGCCAACGTCATTACGGCTCTTTCCATCCTCAGTCCGATGGGTCTTGTaGAAAATGTTCTTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRRRNTARPTSLRLFPSSVRWVL*KMFFSK Trigger: CTTTGAGAAGAACATTTTCAACAAGACCCATCGGAC...TGAGGATGGAAAGAGCCGTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGATGTTCTCAGGACCATGTGCAGGTACAGCAGCTTTGAGGCTAAAGGCCGTCCGATGGGTCTTGTaGAAAATGTTCTTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: REMFSGPCAGTAALRLKAVRWVL*KMFFSK Trigger: CTTTGAGAAGAACATTTTCAACAAGACCCATCGGAC...GGCCTTTAGCCTCAAAGCTGCTGTACCTGCACATGGTCCTGAGAACATCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAATCACATAGAAATAGAGATCGATGCTACTTTTATAGACCACTGTCAATCAGTCGGTCTCCATCATaGTCCAGAATCAGGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CQSHRNRDRCYFYRPLSISRSPS*SRIRMA Trigger: GGCCATCCTGATTCTGGACAATGATGGAGACCGACT...GATTGACAGTGGTCTATAAAAGTAGCATCGATCTCTATTTCTATGTGATTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS TCA 72 bp | CCCCCTTCCCGTGGTTCCCCGAAACACAAGGAAGGGTaGAGAATGACCTACTATCCGTCCGATGGGTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPSRGSPKHKEG*RMTYYPSDGSC Trigger: ACAAGACCCATCGGACGGATAGTAGGTCATTCTTCACCCTTCCTTGTGTTTCGGGGAACCACGGGAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS TCA 72 bp | GTCGGTCTCCATCATTGTCCAGAATCAGGATGGCCTTaGCAGTGTACAGGGAGGGCTCCAAAATCAGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VGLHHCPESGWP*QCTGRAPKSAP Trigger: AGGCGCTGATTTTGGAGCCCTCCCTGTACACTGTCAAGGCCATCCTGATTCTGGACAATGATGGAGACCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100162.5 ENSMUST00000229549.2 ENSMUST00000230893.2 |
||
| CDS TCA 72 bp | CCCGTGGTTCCCCGAAACACAAGGAAGGGTGAAGAATaGCCTACTATCCGTCCGATGGGTCTTGTTGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PVVPRNTRKGEE*PTIRPMGLVEN Trigger: ATTTTCAACAAGACCCATCGGACGGATAGTAGGTCATTCTTCACCCTTCCTTGTGTTTCGGGGAACCACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS CCA 72 bp | CAAGGAAGGGTGAAGAATGACCTACTATCCGTCCGATaGGTCTTGTTGAAAATGTTCTTCTCAAAGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QGRVKNDLLSVR*VLLKMFFSKAF Trigger: AAAGGCCTTTGAGAAGAACATTTTCAACAAGACCCATCGGACGGATAGTAGGTCATTCTTCACCCTTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229549.2 |
||
| CDS CCA 72 bp | AATCCTTCCAACAGAGCGATTTCACTATCCGTCCGATaGGTCTTGTTGAAAATGTTCTTCTCAAAGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NPSNRAISLSVR*VLLKMFFSKAF Trigger: AAAGGCCTTTGAGAAGAACATTTTCAACAAGACCCATCGGACGGATAGTGAAATCGCTCTGTTGGAAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100162.5 ENSMUST00000230893.2 |
||