Pregenerated sensors for COPS7B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026240Ensembl transcript IDs: ENSMUST00000027446.11, ENSMUST00000121534.8, ENSMUST00000122884.2, ENSMUST00000138280.8, ENSMUST00000149542.2
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAACAACTGGGAGGGAGGTAGCCCATCACAGAGACAAGGACCCCTaGAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCA | + |
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Preference number: 1 (lower is better) Translates to: RTTGREVAHHRDKDP*REAGQCWTLLRWHP Trigger: TGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTGATGGGCTACCTCCCTCCCAGTTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | ACCACCACTCCTACCCCAGGGGCAGCCAGGAGGCATGAAAGATCTTaGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: TTTPTPGAARRHERS*ESNCWQTIPVGSWV Trigger: GACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCCAAGATCTTTCATGCCTCCTGGCTGCCCCTGGGGTAGGAGTGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR TCA 90 bp | AGGCTGGCGGAGAAACACAGGAAAGGCCTGGGGGCATCAGTGCCATaGAAGCTGAGAGAACACTCAGCAGTGCAAGCCGGTCAGAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: RLAEKHRKGLGASVP*KLREHSAVQAGQKA Trigger: AGCTTTCTGACCGGCTTGCACTGCTGAGTGTTCTCTCAGCTTTCATGGCACTGATGCCCCCAGGCCTTTCCTGTGTTTCTCCGCCAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR CCA 90 bp | ATGGTACCAATGGATGGGGAGGTACTGGTGAGGGGTGGGCAGATCTaGAACTCACTGCAGTTAGAGAGGGACGGAAATAGGCCCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: MVPMDGEVLVRGGQI*NSLQLERDGNRPWV Trigger: CACCCAGGGCCTATTTCCGTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATTGGTACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | GCACTGCCAACAGGGGTAAGGCAGGAGAGGGGACATGTGGCTACCTaGCTAGAGACACTTGCACCATTGTGGATACTGTGGTACATGGGG | + |
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Preference number: 1 (lower is better) Translates to: ALPTGVRQERGHVAT*LETLAPLWILWYMG Trigger: CCCCATGTACCACAGTATCCACAATGGTGCAAGTGTCTCTAGCCAGGTAGCCACATGTCCCCTCTCCTGCCTTACCCCTGTTGGCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR TCA 90 bp | TGCTCTCAGGTGGATCTCTGGGTTCAAGGACAGCCTGGTCTAGAGTaGATTCCAGGACAGCTGGGGTTACACAGAGAAACCCTCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: CSQVDLWVQGQPGLE*IPGQLGLHRETLPA Trigger: GGCAGGGAGGGTTTCTCTGTGTAACCCCAGCTGTCCTGGAATTCACTCTAGACCAGGCTGTCCTTGAACCCAGAGATCCACCTGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR GCA 90 bp | GGTAAGGCAGGAGAGGGGACATGTGGCTACCTGGCTAGAGACACTTaGACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: GKAGEGTCGYLARDT*TIVDTVVHGAGEAR Trigger: CCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAAGTGTCTCTAGCCAGGTAGCCACATGTCCCCTCTCCTGCCTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR GCA 90 bp | GTCCGGTGGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACCTGCTaGTCAATGCCCAAGAGAACTGCCTCACAGCCGTCACACCACTCA | + |
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Preference number: 1 (lower is better) Translates to: VRWWFSLYWLALRTC*SMPKRTASQPSHHS Trigger: TGAGTGGTGTGACGGCTGTGAGGCAGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCACCACCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | GGAGGCAAGGGAGGAGCAATCATTTTCCGCAATGGTACCAATGGATaGGGAGGTACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCA | + |
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Preference number: 1 (lower is better) Translates to: GGKGGAIIFRNGTNG*GGTGEGWADLELTA Trigger: TGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATTGGTACCATTGCGGAAAATGATTGCTCCTCCCTTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | CTTCCACCTGCTGCTGAGTCCGGTGGTGGTTCTCTTTGTACTGGTTaGCTCTCAGAACCTGCTGCTCAATGCCCAAGAGAACTGCCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: LPPAAESGGGSLCTG*LSEPAAQCPRELPH Trigger: GTGAGGCAGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCACCACCGGACTCAGCAGCAGGTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | CTGAAGGCTTGTGGTTTGGTCCAGGGCAGTGGAGATGATATGGGATaGAGCCTGGCTGGAGGGGAGATATATCTTGTCCCAGGTCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LKACGLVQGSGDDMG*SLAGGEIYLVPGPS Trigger: GGAAGGACCTGGGACAAGATATATCTCCCCTCCAGCCAGGCTCCATCCCATATCATCTCCACTGCCCTGGACCAAACCACAAGCCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR GCA 90 bp | GGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACCTGCTGCTCAATaGCCAAGAGAACTGCCTCACAGCCGTCACACCACTCATGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: GGSLCTGWLSEPAAQ*PRELPHSRHTTHAR Trigger: CCTTGCATGAGTGGTGTGACGGCTGTGAGGCAGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | AAACCCAAAGGTTTAGTAAACATAGCCCAGCACCACATCCCTCCATaGCCTCAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: KPKGLVNIAQHHIPP*PQLALPTGVRQERG Trigger: TCCCCTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGGTGCTGGGCTATGTTTACTAAACCTTTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR TCA 90 bp | GCTCTGCCCCGCCACGGCCCAGATACAATGGAGGCCAGGGACCATTaGCTGAAGCTTCCCGTTTTCTCAAGTTATTTCTGTCATAGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: ALPRHGPDTMEARDH*LKLPVFSSYFCHSN Trigger: GTTGCTATGACAGAAATAACTTGAGAAAACGGGAAGCTTCAGTCAATGGTCCCTGGCCTCCATTGTATCTGGGCCGTGGCGGGGCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR TCA 90 bp | TTGACAACACATGGGGAAATGGCCAGCTGGCTGTGCTTCTCACAGTaGACAACCACAGATGGAGAGCTGGGTGTTAGAGGTGAGCCACAC | + |
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Preference number: 1 (lower is better) Translates to: LTTHGEMASWLCFSQ*TTTDGELGVRGEPH Trigger: GTGTGGCTCACCTCTAACACCCAGCTCTCCATCTGTGGTTGTTCACTGTGAGAAGCACAGCCAGCTGGCCATTTCCCCATGTGTTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR TCA 90 bp | GAGGACAACCGTCTGCACACAAAGGACGCAGGCCTCTGGAGAAATTaGTCTTGCCAACACAATGACCTTGGACTCGCAGCCTCCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: EDNRLHTKDAGLWRN*SCQHNDLGLAASRT Trigger: AGTTCTGGAGGCTGCGAGTCCAAGGTCATTGTGTTGGCAAGATCAATTTCTCCAGAGGCCTGCGTCCTTTGTGTGCAGACGGTTGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR CCA 90 bp | CCAGGGGCAGCCAGGAGGCATGAAAGATCTTGGGAGAGCAATTGTTaGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATGCCAAATCAA | + |
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Preference number: 1 (lower is better) Translates to: PGAARRHERSWESNC*QTIPVGSWVEMPNQ Trigger: TTGATTTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCCAAGATCTTTCATGCCTCCTGGCTGCCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | CCAGCTGGCTGTGCTTCTCACAGTGAACAACCACAGATGGAGAGCTaGGTGTTAGAGGTGAGCCACACAACCTATGGAGGGCATGTACAA | + |
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Preference number: 1 (lower is better) Translates to: PAGCASHSEQPQMES*VLEVSHTTYGGHVQ Trigger: TTGTACATGCCCTCCATAGGTTGTGTGGCTCACCTCTAACACCCAGCTCTCCATCTGTGGTTGTTCACTGTGAGAAGCACAGCCAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR CCA 90 bp | AGATCTTGGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTaGGTCGAAATGCCAAATCAAGGCTGTGCAGTCAGAGACAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RSWESNCWQTIPVGS*VEMPNQGCAVRDSS Trigger: GCTGCTGTCTCTGACTGCACAGCCTTGATTTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCCAAGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | CTTGTGGTTTGGTCCAGGGCAGTGGAGATGATATGGGATGGAGCCTaGCTGGAGGGGAGATATATCTTGTCCCAGGTCCTTCCTTTCATT | + |
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Preference number: 1 (lower is better) Translates to: LVVWSRAVEMIWDGA*LEGRYILSQVLPFI Trigger: AATGAAAGGAAGGACCTGGGACAAGATATATCTCCCCTCCAGCCAGGCTCCATCCCATATCATCTCCACTGCCCTGGACCAAACCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR TCA 90 bp | CCAGTGCCCCAACTTGATGAGAGATCCTGGCTGGGCTTAAGAGGCTaGAAACCCAAAGGTTTAGTAAACATAGCCCAGCACCACATCCCT | + |
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Preference number: 1 (lower is better) Translates to: PVPQLDERSWLGLRG*KPKGLVNIAQHHIP Trigger: AGGGATGTGGTGCTGGGCTATGTTTACTAAACCTTTGGGTTTTCAGCCTCTTAAGCCCAGCCAGGATCTCTCATCAAGTTGGGGCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR TCA 90 bp | TCAGAAAGTCTAGTCAAGTCCTTTTCTCTGGCCAGGAGTGGAGTATaGTGTCATCAGAGGGCTCTGGGTCGCCAGACAAGGAGGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SESLVKSFSLARSGV*CHQRALGRQTRREK Trigger: TTTCTCCCTCCTTGTCTGGCGACCCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACTTGACTAGACTTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR GCA 90 bp | GAGAAAAGGTCCTGTGAGGACAGAGAAGACATGAGGACAACCGTCTaGACACAAAGGACGCAGGCCTCTGGAGAAATTGATCTTGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: EKRSCEDREDMRTTV*TQRTQASGEIDLAN Trigger: GTTGGCAAGATCAATTTCTCCAGAGGCCTGCGTCCTTTGTGTGCAGACGGTTGTCCTCATGTCTTCTCTGTCCTCACAGGACCTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR CCA 90 bp | GGCATGAAAGATCTTGGGAGAGCAATTGTTGGCAGACAATCCCAGTaGGTAGCTGGGTCGAAATGCCAAATCAAGGCTGTGCAGTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GMKDLGRAIVGRQSQ*VAGSKCQIKAVQSE Trigger: CTCTGACTGCACAGCCTTGATTTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCCAAGATCTTTCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | TTCAAGTTCAGAAAGTCTAGTCAAGTCCTTTTCTCTGGCCAGGAGTaGAGTATGATGTCATCAGAGGGCTCTGGGTCGCCAGACAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: FKFRKSSQVLFSGQE*SMMSSEGSGSPDKE Trigger: CTCCTTGTCTGGCGACCCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACTTGACTAGACTTTCTGAACTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR TCA 90 bp | TTGATCTGTAAACAGAGAAAAGGTCCTGTGAGGACAGAGAAGACATaGGGACAACCGTCTGCACACAAAGGACGCAGGCCTCTGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LICKQRKGPVRTEKT*GQPSAHKGRRPLEK Trigger: TTTCTCCAGAGGCCTGCGTCCTTTGTGTGCAGACGGTTGTCCTCATGTCTTCTCTGTCCTCACAGGACCTTTTCTCTGTTTACAGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR GCA 90 bp | TGCTCAATGCCCAAGAGAACTGCCTCACAGCCGTCACACCACTCATaGAAGGTCTTGACAATGTTATTGATATCTTTCTTCCGGATGTCA | + |
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Preference number: 1 (lower is better) Translates to: CSMPKRTASQPSHHS*KVLTMLLISFFRMS Trigger: TGACATCCGGAAGAAAGATATCAATAACATTGTCAAGACCTTGCATGAGTGGTGTGACGGCTGTGAGGCAGTTCTCTTGGGCATTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CCA 90 bp | CAAGTTATTTCTGTCATAGCAACAGAAAGCAACCTAACACATCCCTaGAGAACTTTTAAGGCTGGCGGAGAAACACAGGAAAGGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QVISVIATESNLTHP*RTFKAGGETQERPG Trigger: CCCAGGCCTTTCCTGTGTTTCTCCGCCAGCCTTAAAAGTTCTCCAGGGATGTGTTAGGTTGCTTTCTGTTGCTATGACAGAAATAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR TCA 90 bp | GGCAGGCAAGTGTCAAGAAGCCTGCTTGTTAAAAACAGAAAAAGCTaGTGGTTAGAAAGAGACATTGGAACCAGAAAGGATCTCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GRQVSRSLLVKNRKS*WLERDIGTRKDLPG Trigger: CCCAGGGAGATCCTTTCTGGTTCCAATGTCTCTTTCTAACCATCAGCTTTTTCTGTTTTTAACAAGCAGGCTTCTTGACACTTGCCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR TCA 90 bp | ACATGGCCTGAGGTGTTTTATTATGGCAACCACAAGAAACTTGGATaGGTAACTTCACTTATTGACAACACATGGGGAAATGGCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: TWPEVFYYGNHKKLG*VTSLIDNTWGNGQL Trigger: CAGCTGGCCATTTCCCCATGTGTTGTCAATAAGTGAAGTTACTCATCCAAGTTTCTTGTGGTTGCCATAATAAAACACCTCAGGCCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR CCA 90 bp | ACAAGTAAACCCAGTAAGGATGCTGATGAGCAGTTTTCAAGTTCCTaGAGTGGCAAGGGAGGTAGGAAAAGGATTGGTTCTAACAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: TSKPSKDADEQFSSS*SGKGGRKRIGSNKK Trigger: TTTCTTGTTAGAACCAATCCTTTTCCTACCTCCCTTGCCACTCCAGGAACTTGAAAACTGCTCATCAGCATCCTTACTGGGTTTACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGTCCCCTCCCGACCTaGCCCAGGCCTGCTGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HRDKDPCREAGQCWTLLRCPLPT*PRPAEC Trigger: GCACTCAGCAGGCCTGGGTCAGGTCGGGAGGGGACA...TCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCGACGGAAATAGGCCCTaGGTGTCCCCTCCCGACCTG | + |
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Preference number: 2 (lower is better) Translates to: TQAPSTGVRHQGLVSPVPDGNRP*VSPPDL Trigger: CAGGTCGGGAGGGGACACCCAGGGCCTATTTCCGTC...GGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR CCA 90 bp | GACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGGACGGAAATAGGCCCTaGGTGTCCCCTCCCGACCTG | + |
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Preference number: 2 (lower is better) Translates to: DPCREAGQCWTLLRWHPLDGNRP*VSPPDL Trigger: CAGGTCGGGAGGGGACACCCAGGGCCTATTTCCGTC...CAATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGGGGACATGTGGCTACAGAGACAAGGACCCCTaGAGGGAAGCCGGGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: ASTGTANRGKAGEGTCGYRDKDP*REAGQC Trigger: GCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCT...GTAGCCACATGTCCCCTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR CCA 90 bp | CACCACATCCCTCCATGGCCTCAACTGGCACTGCCAACAGGGGTAAGGCAGGAGGACGGAAATAGGCCCTaGGTGTCCCCTCCCGACCTG | + |
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Preference number: 2 (lower is better) Translates to: HHIPPWPQLALPTGVRQEDGNRP*VSPPDL Trigger: CAGGTCGGGAGGGGACACCCAGGGCCTATTTCCGTC...CTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGTCAGCCCAGTGCCCCAACTTGATGAGAGATCCTGGCTGGGCTTAAGAGGCTGTCCCCTCCCGACCTaGCCCAGGCCTGCTGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LVSPVPQLDERSWLGLRGCPLPT*PRPAEC Trigger: GCACTCAGCAGGCCTGGGTCAGGTCGGGAGGGGACA...GCCTCTTAAGCCCAGCCAGGATCTCTCATCAAGTTGGGGCACTGGGCTGACTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTAGAGAGGGACGGAAATGTCCCCTCCCGACCTaGCCCAGGCCTGCTGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TGEGWADLELTAVREGRKCPLPT*PRPAEC Trigger: GCACTCAGCAGGCCTGGGTCAGGTCGGGAGGGGACA...TTTCCGTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGACACCACATCCCTCCATaGCCTCAACTGGCACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HRDKDPCREAGQCWTLLRHHIPP*PQLALP Trigger: TGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGGTG...TCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCCAAGTCATCAGAGGGCTCTaGGTCGCCAGACAAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QAPSTGVRHQGLVSPVPQVIRGL*VARQGG Trigger: CCCTCCTTGTCTGGCGACCCAGAGCCCTCTGATGAC...TTGGGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACTGCCTCCAGCTTAGGAGAAACACCTTCTGCTaGCCCCAGACCCAAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: GATSTVIPWGWVNCLQLRRNTFC*PQTQAP Trigger: GGGTGCTTGGGTCTGGGGGCAGCAGAAGGTGTTTCT...CCTAAGCTGGAGGCAGTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGAGCCCCAGGAGAAACACCTTCTaGTGCCCCCAGACCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: CREAGQCWTLLRWHPLSPRRNTF*CPQTQA Trigger: TGCTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCT...GGGGCTCAATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR-3UTR CCA 90 bp | GTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCCCAAGCACCCTCCACTaGTGTCAGACACCAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VHGAGEARPPLHSERSHLPSTLH*CQTPGV Trigger: AACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGG...GAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGACCAGTTTGCCCTGGATaGTGTCAGTGTAGACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HRDKDPCREAGQCWTLLRPVCPG*CQCRQP Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAACTGG...TCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCCAACTTGGTACTGGTGAGGGGTaGGCAGATCTGGAACTCACT | + |
|
Preference number: 2 (lower is better) Translates to: APSTGVRHQGLVSPVPQLGTGEG*ADLELT Trigger: AGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACC...AAGTTGGGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACATCCCTCCATGGCCTCAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGGGTACTGGTGAGGGGTaGGCAGATCTGGAACTCACT | + |
|
Preference number: 2 (lower is better) Translates to: PHPSMASTGTANRGKAGEGTGEG*ADLELT Trigger: AGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACC...CTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGTACTGGTGAGGGGTaGGCAGATCTGGAACTCACT | + |
|
Preference number: 2 (lower is better) Translates to: TETRTPAGKPGSAGPCYDGTGEG*ADLELT Trigger: AGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACC...ATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACATGGGGAGGTACTGGTaGGGGGTGGGCAGATCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TIVDTVVHGAGEARPPLHMGRYW*GVGRSG Trigger: TCCAGATCTGCCCACCCCTCACCAGTACCTCCCCAT...GTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGGGGACATGTGGCTACCTGGTGCTGCTCCATTTCCTaGGCTGAGGAGGATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: QLALPTGVRQERGHVATWCCSIS*AEEDAV Trigger: AACAGCATCCTCCTCAGCTCAGGAAATGGAGCAGCA...CCAGGTAGCCACATGTCCCCTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGGTCGCCAGACAAGGAGGGAAGAAACACCTTCTGCTaGCCCCAGACCCAAGCACCC | + |
|
Preference number: 2 (lower is better) Translates to: QEWSMMSSEGSGSPDKEGRNTFC*PQTQAP Trigger: GGGTGCTTGGGTCTGGGGGCAGCAGAAGGTGTTTCT...TCCCTCCTTGTCTGGCGACCCAGAGCCCTCTGATGACATCATACTCCACTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCGCTCTCAGAACCTGCTaGTCAATGCCCAAGAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: TQAPSTGVRHQGLVSPVPALRTC*SMPKRT Trigger: AGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGC...GGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACATCCCTCCATGGCCTCAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGAGGGGTGGGCAGATCTaGAACTCACTGCAGTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PHPSMASTGTANRGKAGERGGQI*NSLQLE Trigger: CTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCT...CTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCACTCAGAGAGGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACCACCACATCCCTCCATaGCCTCAACTGGCACTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LFTQRGATSTVIPWGWVNHHIPP*PQLALP Trigger: TGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGGTG...GTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCCTCTCTGAGTGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CAA 90 bp | AGAGTCGGAATCTGCCATGTGCTCTCCTCCCTGAAGGCTTGTGGTTaGGTCCAGGGCAGTGGAGATGATATGGGATGGAGCCTGGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RVGICHVLSSLKACG*VQGSGDDMGWSLAG Trigger: TCCAGCCAGGCTCCATCCCATATCATCTCCACTGCCCTGGACCAAACCACAAGCCTTCAGGGAGGAGAGCACATGGCAGATTCCGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGAGCCCCAGCTTAGGACCAGCCTaGCAAAATGACAGAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: CREAGQCWTLLRWHPLSPSLGPA*QNDREQ Trigger: TTGCTCTCTGTCATTTTGTCAGGCTGGTCCTAAGCT...GGGGCTCAATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCCAACTTCTCCATTTCCTGAGCTaGGGAGGATGCTGTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: APSTGVRHQGLVSPVPQLLHFLS*GGCCCF Trigger: AAAGCAACAGCATCCTCCTCAGCTCAGGAAATGGAG...AAGTTGGGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | GTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCCTCCATTTCCTGAGCTaGGGAGGATGCTGTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VHGAGEARPPLHSERSHLLHFLS*GGCCCF Trigger: AAAGCAACAGCATCCTCCTCAGCTCAGGAAATGGAG...GAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCAGAGGACACCAAGCTAGGAGAAACACCTTCTGCTGCCCCCAGACCCAAGTGCTGCTCCATTTCCTaGGCTGAGGAGGATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PAEDTKLGETPSAAPRPKCCSIS*AEEDAV Trigger: AACAGCATCCTCCTCAGCTCAGGAAATGGAGCAGCA...CTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCTAGCTTGGTGTCCTCTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAAGGGAGGAGCAATCATTTTCCGCAATGGTACCAATGGATGGGGAGGTACTAGAGACAAGGACCCCTaGAGGGAAGCCGGGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GKGGAIIFRNGTNGWGGTRDKDP*REAGQC Trigger: GCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCT...AGTACCTCCCCATCCATTGGTACCATTGCGGAAAATGATTGCTCCTCCCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACTGCCTCCAGCTGGATGTCACGGCCAATaGAGAAATCCACTTCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ERSHLHSHPLGLGKLPPAGCHGQ*RNPLPG Trigger: TCCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...AGCTGGAGGCAGTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCACTCAGAGAGGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACGGTACTGGTGAGGGGTaGGCAGATCTGGAACTCACT | + |
|
Preference number: 2 (lower is better) Translates to: LFTQRGATSTVIPWGWVNGTGEG*ADLELT Trigger: AGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACC...GTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCCTCTCTGAGTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTCAGCCCAGTGCCCCAACTTGATGAGAGATCCTGGCTGGGCTTAAGAGGCTGTGGTACATGGGGCTaGAGAAGCAAGGCCCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LVSPVPQLDERSWLGLRGCGTWG*RSKAPS Trigger: AGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACA...GCCTCTTAAGCCCAGCCAGGATCTCTCATCAAGTTGGGGCACTGGGCTGACTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGAGCCCCACCAGCCTGACAAAATaGCAGAGAGCAAAGAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: CREAGQCWTLLRWHPLSPTSLTK*QRAKNN Trigger: GTTGTTCTTTGCTCTCTGTCATTTTGTCAGGCTGGT...GGGGCTCAATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGAACCAGCCTGACAAAATaGCAGAGAGCAAAGAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: HRDKDPCREAGQCWTLLRTSLTK*QRAKNN Trigger: GTTGTTCTTTGCTCTCTGTCATTTTGTCAGGCTGGT...TCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCCACAGTCATCCCTTGGGGATGTCACGGCCAATaGAGAAATCCACTTCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KQGPLFTQRGATSTVIPWGCHGQ*RNPLPG Trigger: TCCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...CCAAGGGATGACTGTGGAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAAACCCAAAGGTTTAGTAAACATAGCCCAGCACCACATCCCTCCATGGCCGACGGAAATAGGCCCTaGGTGTCCCCTCCCGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LKTQRFSKHSPAPHPSMADGNRP*VSPPDL Trigger: CAGGTCGGGAGGGGACACCCAGGGCCTATTTCCGTC...GGCCATGGAGGGATGTGGTGCTGGGCTATGTTTACTAAACCTTTGGGTTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACATCCCTCCATGGCCTCAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGTCTCTTTGTACTGGTTaGCTCTCAGAACCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PHPSMASTGTANRGKAGESLCTG*LSEPAA Trigger: AGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGA...CTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACACTTGCACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCGGCCCTAGTGGCGGCTaGAGACCAGACCTTTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: RHLHHCGYCGTWGWRSKAGPSGG*RPDLSL Trigger: AAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGGGCC...GGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAAGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | GCATCCATTGAGCCCCTGAGTCTGAAGGGAACAACTAGGGAAGGAGGCAAGGGATCCACTTCCAGGAGCTaGTTTCGCTGGTCCAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ASIEPLSLKGTTREGGKGSTSRS*FRWSSL Trigger: CAAACTGGACCAGCGAAATCAGCTCCTGGAAGTGGA...TCCCTTGCCTCCTTCCCTAGTTGTTCCCTTCAGACTCAGGGGCTCAATGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACTGCCTCCAGCTGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: ERSHLHSHPLGLGKLPPADTLHS*CQAHDG Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...AGCTGGAGGCAGTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATGCCAAAGGAGAAACACCTTCTaGTGCCCCCAGACCCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GRAIVGRQSQWVAGSKCQRRNTF*CPQTQA Trigger: TGCTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCT...TTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGTCCTTTTCTCTGGCCAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGCCAAGCACCCTCCACTaGTGTCAGACACCAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SSPFLWPGVEYDVIRGLWPSTLH*CQTPGV Trigger: AACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGG...CCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCCAACTTAGGCATGAAAGATCTTaGGAGAGCAATTGTTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: APSTGVRHQGLVSPVPQLRHERS*ESNCWQ Trigger: CTGCCAACAATTGCTCTCCCAAGATCTTTCATGCCT...AAGTTGGGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCAGAGGACACCAAGCTAGGAGAAACACCTTCTGCTGCCCCCAGACCCAAGTCTCTTTGTACTGGTTaGCTCTCAGAACCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PAEDTKLGETPSAAPRPKSLCTG*LSEPAA Trigger: AGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGA...CTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCTAGCTTGGTGTCCTCTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAATCTTATATGTTCTGACCTCTGGCTGCATTCCTAGCACACAAGTAAACCCATGTCCCCTCCCGACCTaGCCCAGGCCTGCTGAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VILYVLTSGCIPSTQVNPCPLPT*PRPAEC Trigger: GCACTCAGCAGGCCTGGGTCAGGTCGGGAGGGGACA...TGGGTTTACTTGTGTGCTAGGAATGCAGCCAGAGGTCAGAACATATAAGATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCCACAGTCATCCCTTGGACCAGCCTGACAAAATaGCAGAGAGCAAAGAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: KQGPLFTQRGATSTVIPWTSLTK*QRAKNN Trigger: GTTGTTCTTTGCTCTCTGTCATTTTGTCAGGCTGGT...CCAAGGGATGACTGTGGAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTAGAGAGGGACAGCTTAGGACCAGCCTaGCAAAATGACAGAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: EVLVRGGQIWNSLQLERDSLGPA*QNDREQ Trigger: TTGCTCTCTGTCATTTTGTCAGGCTGGTCCTAAGCT...GTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCTTTTCTCTGGCCAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGGTCTCCACTTCCAGGAGCTaGTTTCGCTGGTCCAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SPFLWPGVEYDVIRGLWVSTSRS*FRWSSL Trigger: CAAACTGGACCAGCGAAATCAGCTCCTGGAAGTGGA...GACCCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGTTAGTCAGCCCAGTGCCCCAACTTGATGAGAGATCCTGGCTGGGCTTAAGAGCTCTCAGAACCTGCTaGTCAATGCCCAAGAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: GLVSPVPQLDERSWLGLRALRTC*SMPKRT Trigger: AGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGC...TCTTAAGCCCAGCCAGGATCTCTCATCAAGTTGGGGCACTGGGCTGACTAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTACAGGGTCTCCATCTCCCCTTAGGAAACAAAATACACACACACATACACACAGAGACAAGGACCCCTaGAGGGAAGCCGGGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: STGSPSPLRKQNTHTHTHRDKDP*REAGQC Trigger: GCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCT...GTGTGTATGTGTGTGTGTATTTTGTTTCCTAAGGGGAGATGGAGACCCTGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATGCCAAGCCAAATCAAGGCTGTaGAGTCAGAGACAGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GRAIVGRQSQWVAGSKCQAKSRL*SQRQQQ Trigger: TTGCTGCTGTCTCTGACTGCACAGCCTTGATTTGGC...TTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAACTGTTCAAGTTCAGAAAGTCTAGTCAAGTCCTTTTCTCTGGCCAGGAGGTCATCAGAGGGCTCTaGGTCGCCAGACAAGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LKLFKFRKSSQVLFSGQEVIRGL*VARQGG Trigger: CCCTCCTTGTCTGGCGACCCAGAGCCCTCTGATGAC...CTCCTGGCCAGAGAAAAGGACTTGACTAGACTTTCTGAACTTGAACAGTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGGTCGCCAGACAAGGAGGGAGACATCCCCGGCGATTaGACTATAACAAATATTGAC | + |
|
Preference number: 2 (lower is better) Translates to: QEWSMMSSEGSGSPDKEGDIPGD*TITNID Trigger: GTCAATATTTGTTATAGTCCAATCGCCGGGGATGTC...TCCCTCCTTGTCTGGCGACCCAGAGCCCTCTGATGACATCATACTCCACTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAAACCCAAAGGTTTAGTAAACATAGCCCAGCACCACATCCCTCCATGGCCATCTTCTTAGTGGGTTaGCTCTGCTCAGTATGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LKTQRFSKHSPAPHPSMAIFLVG*LCSVWG Trigger: CCCCCATACTGAGCAGAGGCAACCCACTAAGAAGAT...GGCCATGGAGGGATGTGGTGCTGGGCTATGTTTACTAAACCTTTGGGTTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTACAGGGTCTCCATCTCCCCTTAGGAAACAAAATACACACACACATACACACTGTGGTACATGGGGCTaGAGAAGCAAGGCCCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: STGSPSPLRKQNTHTHTHCGTWG*RSKAPS Trigger: AGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACA...GTGTGTATGTGTGTGTGTATTTTGTTTCCTAAGGGGAGATGGAGACCCTGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGATATATCTTGTCCCAGGTCCTTCCTTTCATTTTCTTCACAGCTGCCTAGGATACTGTGGTACATaGGGCTGGAGAAGCAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GEIYLVPGPSFHFLHSCLGYCGT*GWRSKA Trigger: GGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCC...TAGGCAGCTGTGAAGAAAATGAAAGGAAGGACCTGGGACAAGATATATCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAACTGTTCAAGTTCAGAAAGTCTAGTCAAGTCCTTTTCTCTGGCCAGGAGCCAAGCACCCTCCACTaGTGTCAGACACCAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LKLFKFRKSSQVLFSGQEPSTLH*CQTPGV Trigger: AACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGG...CTCCTGGCCAGAGAAAAGGACTTGACTAGACTTTCTGAACTTGAACAGTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCAGGGAGCAAAACTGAACTCATCACAGTAAGAACAATGGAGGCAAGATATCCAAGCACCCTCCACTaGTGTCAGACACCAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GPGSKTELITVRTMEARYPSTLH*CQTPGV Trigger: AACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGG...ATATCTTGCCTCCATTGTTCTTACTGTGATGAGTTCAGTTTTGCTCCCTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGTCCTTTTCTCTGGCCAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGAGAAAGAAGCAGCAATaGTCCTTCACCAGTCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSPFLWPGVEYDVIRGLWRKKQQ*SFTSLR Trigger: CCTCAGACTGGTGAAGGACCATTGCTGCTTCTTTCT...CCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGTCCTTTTCTCTGGCCAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGTTCTCTGGCCAGGAGTaGAGTATGATGTCATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSPFLWPGVEYDVIRGLWFSGQE*SMMSSE Trigger: CTCTGATGACATCATACTCCACTCCTGGCCAGAGAA...CCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CAA 90 bp | CCCAAGAGAACTGCCTCACAGCCGTCACACCACTCATGCAAGGTCTaGACAATGTTATTGATATCTTTCTTCCGGATGTCACGGCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: PKRTASQPSHHSCKV*TMLLISFFRMSRPM Trigger: CATTGGCCGTGACATCCGGAAGAAAGATATCAATAACATTGTCAAGACCTTGCATGAGTGGTGTGACGGCTGTGAGGCAGTTCTCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTACAGGGTCTCCATCTCCCCTTAGGAAACAAAATACACACACACATACACACAGGAGAAACACCTTCTaGTGCCCCCAGACCCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: STGSPSPLRKQNTHTHTHRRNTF*CPQTQA Trigger: TGCTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCT...GTGTGTATGTGTGTGTGTATTTTGTTTCCTAAGGGGAGATGGAGACCCTGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR CAA 90 bp | GCCTCACAGCCGTCACACCACTCATGCAAGGTCTTGACAATGTTATaGATATCTTTCTTCCGGATGTCACGGCCAATGCAGAAATCCACT | + |
|
Preference number: 2 (lower is better) Translates to: ASQPSHHSCKVLTML*ISFFRMSRPMQKST Trigger: AGTGGATTTCTGCATTGGCCGTGACATCCGGAAGAAAGATATCAATAACATTGTCAAGACCTTGCATGAGTGGTGTGACGGCTGTGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATACACATACCCTATCCCACCCCCATATAATCCTCCACACCTACACACACACAGCTTAGGACCAGCCTaGCAAAATGACAGAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TYTYPIPPPYNPPHLHTHSLGPA*QNDREQ Trigger: TTGCTCTCTGTCATTTTGTCAGGCTGGTCCTAAGCT...GTGTGTGTGTAGGTGTGGAGGATTATATGGGGGTGGGATAGGGTATGTGTATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGGGCATGTACAAGCAAAGAAGGGTCACAGTGGACCCCCAGCAAGCACAGAAATGCAGGGAGGGAGTaGCACATTTATTTAATAACA | + |
|
Preference number: 2 (lower is better) Translates to: WRACTSKEGSQWTPSKHRNAGRE*HIYLIT Trigger: TGTTATTAAATAAATGTGGCACTCCCTCCCTGCATT...TCTGTGCTTGCTGGGGGTCCACTGTGACCCTTCTTTGCTTGTACATGCCCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATACACATACCCTATCCCACCCCCATATAATCCTCCACACCTACACACACACACCAGCCTGACAAAATaGCAGAGAGCAAAGAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: TYTYPIPPPYNPPHLHTHTSLTK*QRAKNN Trigger: GTTGTTCTTTGCTCTCTGTCATTTTGTCAGGCTGGT...GTGTGTGTGTAGGTGTGGAGGATTATATGGGGGTGGGATAGGGTATGTGTATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGAAACTGTTCAAGTTCAGAAAGTCTAGTCAAGTCCTTTTCTCTGGCCAGGAGGGTCTTCTAGTTCCCTaGGATTCCTCATCTCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LKLFKFRKSSQVLFSGQEGLLVP*DSSSPG Trigger: ACCTGGAGATGAGGAATCTCAGGGAACTAGAAGACC...CTCCTGGCCAGAGAAAAGGACTTGACTAGACTTTCTGAACTTGAACAGTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAATCTTATATGTTCTGACCTCTGGCTGCATTCCTAGCACACAAGTAAACCCAAGAGAAAAGGTCCTGTaGGGACAGAGAAGACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: VILYVLTSGCIPSTQVNPREKVL*GQRRHE Trigger: CTCATGTCTTCTCTGTCCTCACAGGACCTTTTCTCT...TGGGTTTACTTGTGTGCTAGGAATGCAGCCAGAGGTCAGAACATATAAGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAATCTTATATGTTCTGACCTCTGGCTGCATTCCTAGCACACAAGTAAACCCACATGTGATTAGGGAGTaGTCAAACACATTTTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VILYVLTSGCIPSTQVNPHVIRE*SNTFWE Trigger: TTCCCAAAATGTGTTTGATCACTCCCTAATCACATG...TGGGTTTACTTGTGTGCTAGGAATGCAGCCAGAGGTCAGAACATATAAGATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR GCA 72 bp | GGGAGGGAGGTAGCCCATCACAGAGACAAGGACCCCTaGAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGA | + |
|
Preference number: 3 (lower is better) Translates to: GREVAHHRDKDP*REAGQCWTLLR Trigger: TCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTGATGGGCTACCTCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATTTTCGCTGGTCCAGTTaGCCCTGGATGATGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TETRTPAGKPGSAGPCYDFRWSS*PWMMSV Trigger: CACTGACATCATCCAGGGCAAACTGGACCAGCGAAA...ATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCCAACGGTGGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QAPSTGVRHQGLVSPVPQRWWFS*YWLALR Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACCACCG...TTGGGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR GCA 72 bp | AGCAGAGGACACCAAGCTAGGAGAAACACCTTCTGCTaGCCCCAGACCCAAGCACCCTCCACTGGTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SRGHQARRNTFC*PQTQAPSTGVR Trigger: TCTGACACCAGTGGAGGGTGCTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCTAGCTTGGTGTCCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | TTCACTCAGAGAGGAGCCACCTCCACAGTCATCCCTTaGGGCTGGGTAAACTGCCTCCAGCTTAGGACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FTQRGATSTVIP*GWVNCLQLRTS Trigger: GCTGGTCCTAAGCTGGAGGCAGTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCCTCTCTGAGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACTGCCTCCAGCTTAGGTTCTCTTTGTACTGGTaGGCTCTCAGAACCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GATSTVIPWGWVNCLQLRFSLYW*ALRTCC Trigger: GCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAA...CCTAAGCTGGAGGCAGTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR GCA 72 bp | CCTAAAAATAAGCAGTTCAGCTCCACCATGATGCTCTaGCCCGCCACGGCCCAGATACAATGGAGGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PKNKQFSSTMML*PATAQIQWRPG Trigger: CCCTGGCCTCCATTGTATCTGGGCCGTGGCGGGGCAGAGCATCATGGTGGAGCTGAACTGCTTATTTTTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACTGCCTCCAGCTTAGGGGATACACTTCATTCTaGATGCCAAGCTCACGATGG | + |
|
Preference number: 3 (lower is better) Translates to: GATSTVIPWGWVNCLQLRGYTSF*MPSSRW Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...CCTAAGCTGGAGGCAGTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| 3UTR TCA 72 bp | CCTGAAGGCTTGTGGTTTGGTCCAGGGCAGTGGAGATaGTATGGGATGGAGCCTGGCTGGAGGGGAGATATA | + |
|
Preference number: 3 (lower is better) Translates to: PEGLWFGPGQWR*YGMEPGWRGDI Trigger: TATATCTCCCCTCCAGCCAGGCTCCATCCCATATCATCTCCACTGCCCTGGACCAAACCACAAGCCTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR TCA 72 bp | GTGTTAGAGTCGGAATCTGCCATGTGCTCTCCTCCCTaGAGGCTTGTGGTTTGGTCCAGGGCAGTGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: VLESESAMCSPP*RLVVWSRAVEM Trigger: CATCTCCACTGCCCTGGACCAAACCACAAGCCTTCAGGGAGGAGAGCACATGGCAGATTCCGACTCTAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR GCA 72 bp | GGCTCTCAGAACCTGCTGCTCAATGCCCAAGAGAACTaGCTCACAGCCGTCACACCACTCATGCAAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSQNLLLNAQEN*LTAVTPLMQGL Trigger: AAGACCTTGCATGAGTGGTGTGACGGCTGTGAGGCAGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | ATGGATGGGGAGGTACTGGTGAGGGGTGGGCAGATCTaGAACTCACTGCAGTTAGAGAGGGACGGAAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: MDGEVLVRGGQI*NSLQLERDGNR Trigger: CCTATTTCCGTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | CACTTGCACCATTGTGGATACTGTGGTACATGGGGCTaGAGAAGCAAGGCCCCCTCTTCACTCAGAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLHHCGYCGTWG*RSKAPSSLREE Trigger: CTCCTCTCTGAGTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | GGTTTAGTAAACATAGCCCAGCACCACATCCCTCCATaGCCTCAACTGGCACTGCCAACAGGGGTAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLVNIAQHHIPP*PQLALPTGVRQ Trigger: CTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGGTGCTGGGCTATGTTTACTAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTTTCGCTGGTCCAGTTaGCCCTGGATGATGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TIVDTVVHGAGEARPPLHFRWSS*PWMMSV Trigger: CACTGACATCATCCAGGGCAAACTGGACCAGCGAAA...GTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACCATCTTCTTAGTGGGTaGCCTCTGCTCAGTATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TIVDTVVHGAGEARPPLHHLLSG*PLLSMG Trigger: CCCCATACTGAGCAGAGGCAACCCACTAAGAAGATG...GTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR TCA 72 bp | CACAGCTGCCTAAAAATAAGCAGTTCAGCTCCACCATaGTGCTCTGCCCCGCCACGGCCCAGATACAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSCLKISSSAPP*CSAPPRPRYNG Trigger: TCCATTGTATCTGGGCCGTGGCGGGGCAGAGCATCATGGTGGAGCTGAACTGCTTATTTTTAGGCAGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR TCA 72 bp | CGTCTGCACACAAAGGACGCAGGCCTCTGGAGAAATTaGTCTTGCCAACACAATGACCTTGGACTCGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLHTKDAGLWRN*SCQHNDLGLAA Trigger: GGCTGCGAGTCCAAGGTCATTGTGTTGGCAAGATCAATTTCTCCAGAGGCCTGCGTCCTTTGTGTGCAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR GCA 72 bp | TGGTGGTTCTCTTTGTACTGGTTGGCTCTCAGAACCTaGTGCTCAATGCCCAAGAGAACTGCCTCACAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: WWFSLYWLALRT*CSMPKRTASQP Trigger: CGGCTGTGAGGCAGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | AATGGTACCAATGGATGGGGAGGTACTGGTGAGGGGTaGGCAGATCTGGAACTCACTGCAGTTAGAGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NGTNGWGGTGEG*ADLELTAVREG Trigger: TCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATTGGTACCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | GGAGGAGCAATCATTTTCCGCAATGGTACCAATGGATaGGGAGGTACTGGTGAGGGGTGGGCAGATCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGAIIFRNGTNG*GGTGEGWADLE Trigger: TTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATTGGTACCATTGCGGAAAATGATTGCTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | CATGTGGCTACCTGGCTAGAGACACTTGCACCATTGTaGATACTGTGGTACATGGGGCTGGAGAAGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HVATWLETLAPL*ILWYMGLEKQG Trigger: GCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAAGTGTCTCTAGCCAGGTAGCCACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | GCTGCTGAGTCCGGTGGTGGTTCTCTTTGTACTGGTTaGCTCTCAGAACCTGCTGCTCAATGCCCAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AAESGGGSLCTG*LSEPAAQCPRE Trigger: TTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCACCACCGGACTCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | TGTGGTTTGGTCCAGGGCAGTGGAGATGATATGGGATaGAGCCTGGCTGGAGGGGAGATATATCTTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CGLVQGSGDDMG*SLAGGEIYLVP Trigger: TGGGACAAGATATATCTCCCCTCCAGCCAGGCTCCATCCCATATCATCTCCACTGCCCTGGACCAAACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR CCA 72 bp | CTATGGAGGGCATGTACAAGCAAAGAAGGGTCACAGTaGACCCCCAGCAAGCACAGACACTGGAGTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LWRACTSKEGSQ*TPSKHRHWSLC Trigger: ACACAGACTCCAGTGTCTGTGCTTGCTGGGGGTCCACTGTGACCCTTCTTTGCTTGTACATGCCCTCCATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGGATGGGGAGGTACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTTTCTCTTTGTACTGGTaGGCTCTCAGAACCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NGWGGTGEGWADLELTAVFSLYW*ALRTCC Trigger: GCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAA...AACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR TCA 72 bp | GTGGATCTCTGGGTTCAAGGACAGCCTGGTCTAGAGTaGATTCCAGGACAGCTGGGGTTACACAGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: VDLWVQGQPGLE*IPGQLGLHRET Trigger: GGTTTCTCTGTGTAACCCCAGCTGTCCTGGAATTCACTCTAGACCAGGCTGTCCTTGAACCCAGAGATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR GCA 72 bp | TGGTTCTCTTTGTACTGGTTGGCTCTCAGAACCTGCTaGTCAATGCCCAAGAGAACTGCCTCACAGCCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: WFSLYWLALRTC*SMPKRTASQPS Trigger: TGACGGCTGTGAGGCAGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR GCA 72 bp | AGCACAGACACTGGAGTCTGTGTTAGAGTCGGAATCTaGCATGTGCTCTCCTCCCTGAAGGCTTGTGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: STDTGVCVRVGI*HVLSSLKACGL Trigger: CAAACCACAAGCCTTCAGGGAGGAGAGCACATGGCAGATTCCGACTCTAACACAGACTCCAGTGTCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR CCA 72 bp | GCCAGGAGGCATGAAAGATCTTGGGAGAGCAATTGTTaGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: ARRHERSWESNC*QTIPVGSWVEM Trigger: CATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCCAAGATCTTTCATGCCTCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | ATGCTCTCAGGTGGATCTCTGGGTTCAAGGACAGCCTaGTCTAGAGTGAATTCCAGGACAGCTGGGGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: MLSGGSLGSRTA*SRVNSRTAGVT Trigger: TGTAACCCCAGCTGTCCTGGAATTCACTCTAGACCAGGCTGTCCTTGAACCCAGAGATCCACCTGAGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCCACACTCATGCAAGGTCTaGACAATGTTATTGATATCT | + |
|
Preference number: 3 (lower is better) Translates to: TWGWRSKAPSSLREEPPPHSCKV*TMLLIS Trigger: AGATATCAATAACATTGTCAAGACCTTGCATGAGTG...TGGAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR TCA 72 bp | TTCTTAATGTTGCTAACCTCGGCTTCCACCTGCTGCTaGGTCCGGTGGTGGTTCTCTTTGTACTGGTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLMLLTSASTCC*VRWWFSLYWLA Trigger: AGCCAACCAGTACAAAGAGAACCACCACCGGACTCAGCAGCAGGTGGAAGCCGAGGTTAGCAACATTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR TCA 72 bp | CGCAGGCCTCTGGAGAAATTGATCTTGCCAACACAATaGCCTTGGACTCGCAGCCTCCAGAACTGTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RRPLEKLILPTQ*PWTRSLQNCEK Trigger: TTTCTCACAGTTCTGGAGGCTGCGAGTCCAAGGTCATTGTGTTGGCAAGATCAATTTCTCCAGAGGCCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR GCA 72 bp | TCCTGTGAGGACAGAGAAGACATGAGGACAACCGTCTaGACACAAAGGACGCAGGCCTCTGGAGAAATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SCEDREDMRTTV*TQRTQASGEID Trigger: ATCAATTTCTCCAGAGGCCTGCGTCCTTTGTGTGCAGACGGTTGTCCTCATGTCTTCTCTGTCCTCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR CCA 72 bp | AGAAAGTCTAGTCAAGTCCTTTTCTCTGGCCAGGAGTaGAGTATGATGTCATCAGAGGGCTCTGGGTCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RKSSQVLFSGQE*SMMSSEGSGSP Trigger: TGGCGACCCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACTTGACTAGACTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | ATCAATACCCACAAAGACCTAGTAGTGAGATCAATGTaGGCATGGGCTTCATCCCAGAGATGCCTCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: INTHKDLVVRSM*AWASSQRCLPR Trigger: TCTTGGGAGGCATCTCTGGGATGAAGCCCATGCCCACATTGATCTCACTACTAGGTCTTTGTGGGTATTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR TCA 72 bp | AGAGATGCCTCCCAAGACCTCATTAATGAACTTCAGTaGGGATATGGAATGCAGGGAGGGAGTGCCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: RDASQDLINELQ*GYGMQGGSATF Trigger: AAATGTGGCACTCCCTCCCTGCATTCCATATCCTCACTGAAGTTCATTAATGAGGTCTTGGGAGGCATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR TCA 72 bp | ACGGCCCAGATACAATGGAGGCCAGGGACCATTGACTaGAGCTTCCCGTTTTCTCAAGTTATTTCTGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: TAQIQWRPGTID*SFPFSQVISVI Trigger: TATGACAGAAATAACTTGAGAAAACGGGAAGCTTCAGTCAATGGTCCCTGGCCTCCATTGTATCTGGGCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR TCA 72 bp | TACATACGTCCAGGACAGAACTCAGGTCATCTGGCTTaGCCACGAGCAGCCTTCCCAATCTTTAATTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: YIRPGQNSGHLA*PRAAFPIFNFL Trigger: CAAGAAATTAAAGATTGGGAAGGCTGCTCGTGGTCAAGCCAGATGACCTGAGTTCTGTCCTGGACGTATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR CCA 72 bp | GAGAGAACACTCAGCAGTGCAAGCCGGTCAGAAAGCTaGAGGTCAATGGTCTCCTTGATGAAAAAGAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ERTLSSASRSES*RSMVSLMKKKK Trigger: CTTTTTCTTTTTCATCAAGGAGACCATTGACCTCCAGCTTTCTGACCGGCTTGCACTGCTGAGTGTTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR GCA 72 bp | CCCAAGAGAACTGCCTCACAGCCGTCACACCACTCATaGAAGGTCTTGACAATGTTATTGATATCTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PKRTASQPSHHS*KVLTMLLISFF Trigger: GAAGAAAGATATCAATAACATTGTCAAGACCTTGCATGAGTGGTGTGACGGCTGTGAGGCAGTTCTCTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| 3UTR CCA 72 bp | TGCATCACTTTGAGTGCAGGGATTACAAGCATCAGTTaGCTTCCCTCTCCTGTAATCTTATATGTTCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: CITLSAGITSIS*LPSPVILYVLT Trigger: GGTCAGAACATATAAGATTACAGGAGAGGGAAGCCAACTGATGCTTGTAATCCCTGCACTCAAAGTGATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR TCA 72 bp | TTATTTAATAACAGAGCCCCTCTTCCACAGAGCATGTaGTTAGGGAGTGATCAAACACATTTTGGGAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LFNNRAPLPQSM*LGSDQTHFGNQ Trigger: TTGATTCCCAAAATGTGTTTGATCACTCCCTAATCACATGCTCTGTGGAAGAGGGGCTCTGTTATTAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| 3UTR TCA 72 bp | GTGTCAAGAAGCCTGCTTGTTAAAAACAGAAAAAGCTaGTGGTTAGAAAGAGACATTGGAACCAGAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VSRSLLVKNRKS*WLERDIGTRKD Trigger: ATCCTTTCTGGTTCCAATGTCTCTTTCTAACCATCAGCTTTTTCTGTTTTTAACAAGCAGGCTTCTTGACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR TCA 72 bp | GAGGTGTTTTATTATGGCAACCACAAGAAACTTGGATaGGTAACTTCACTTATTGACAACACATGGGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: EVFYYGNHKKLG*VTSLIDNTWGN Trigger: ATTTCCCCATGTGTTGTCAATAAGTGAAGTTACTCATCCAAGTTTCTTGTGGTTGCCATAATAAAACACCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR GCA 72 bp | TTTAAACTAATGATCCTAAGCTCTTGTGGTCCTCTCTaGTCATTTGTCTTTCATTGGTTTGATGGGTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FKLMILSSCGPL*SFVFHWFDGYF Trigger: AAAATACCCATCAAACCAATGAAAGACAAATGAGCAGAGAGGACCACAAGAGCTTAGGATCATTAGTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| 3UTR CCA 72 bp | AACTGTGAGAAAATTGATTCTGTTGTTAAAGACACATaGCCTGAGGTGTTTTATTATGGCAACCACAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NCEKIDSVVKDT*PEVFYYGNHKK Trigger: TTTCTTGTGGTTGCCATAATAAAACACCTCAGGCCATGTGTCTTTAACAACAGAATCAATTTTCTCACAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | GGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGAGAGTGGTGAGGGCTaGGCCACTGGTACCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLQGSRAVLDPVTMASIESGEG*ATGTFG Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACCACTCTC...AATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR TCA 90 bp | GACCCAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCTGCTGCTCCATTTCCTaGGCTGAGGAGGATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DPSTLHWCQTPGVSQPSACCSIS*AEEDAV Trigger: AACAGCATCCTCCTCAGCTCAGGAAATGGAGCAGCA...GGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CCA 90 bp | GTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCGGAGCCTCTAGCACCTaGCTTATGAGAGTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHGAGEARPPLHSERSHLGASST*LMRVVR Trigger: CCTCACCACTCTCATAAGCCAGGTGCTAGAGGCTCC...GAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTAGCCCATCACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGTTGGCTCCTGAACATTaGCCAACTCCAGCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGSPSQRQGPLQGSRAVLLAPEH*PTPAVL Trigger: GAGAACTGCTGGAGTTGGCCAATGTTCAGGAGCCAA...CAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTGATGGGCTACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTAGAGAGGGACGGAAAGAGAGTGGTGAGGGCTaGGCCACTGGTACCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGEGWADLELTAVREGRKESGEG*ATGTFG Trigger: GCCAAAGGTACCAGTGGCTCAGCCCTCACCACTCTC...TTTCCGTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR TCA 90 bp | GGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGGTCTTCTAGTTCCCTaGGATTCCTCATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLQGSRAVLDPVTMASIGLLVP*DSSSPG Trigger: ACCTGGAGATGAGGAATCTCAGGGAACTAGAAGACC...AATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| CDS-3UTR TCA 90 bp | CAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGGGGACATGTGGCTACCTGGCCAGTTTGCCCTGGATaGTGTCAGTGTAGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLALPTGVRQERGHVATWPVCPG*CQCRQP Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAACTGG...CCAGGTAGCCACATGTCCCCTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCGGATGTCACGGCCAATaGAGAAATCCACTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQAPSTGVRHQGLVSPVPGCHGQ*RNPLPG Trigger: TCCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...GGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGAGGACACCAAGCTAGGAGAAACACCTTCTGCTGCCCCCAGACCCAAGGGAGCCTCTAGCACCTaGCTTATGAGAGTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAEDTKLGETPSAAPRPKGASST*LMRVVR Trigger: CCTCACCACTCTCATAAGCCAGGTGCTAGAGGCTCC...CTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCTAGCTTGGTGTCCTCTGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGGAGCCACCTCCACAGTCATCCCTTGGGGCTGGGTAAACTGCCTCCAGCTCTCCATTTCCTGAGCTaGGGAGGATGCTGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERSHLHSHPLGLGKLPPALHFLS*GGCCCF Trigger: AAAGCAACAGCATCCTCCTCAGCTCAGGAAATGGAG...AGCTGGAGGCAGTTTACCCAGCCCCAAGGGATGACTGTGGAGGTGGCTCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGACACCAAGCTAGGAGAAACACCTTCTGCTGCCCCCAGACCCAAGCAGGAGCCTCTAGCACCTaGCTTATGAGAGTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGHQARRNTFCCPQTQAGASST*LMRVVR Trigger: CCTCACCACTCTCATAAGCCAGGTGCTAGAGGCTCC...TGCTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCTAGCTTGGTGTCCTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGGTCGCCAGACAAGGAGGGAAGCCACACTCAGTTCTaGCAGGCTCTCCTTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QEWSMMSSEGSGSPDKEGSHTQF*QALLVG Trigger: GCCAACAAGGAGAGCCTGCCAGAACTGAGTGTGGCT...TCCCTCCTTGTCTGGCGACCCAGAGCCCTCTGATGACATCATACTCCACTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCAGAGGACACCAAGCTAGGAGAAACACCTTCTGCTGCCCCCAGACCCAACTCCAAGAGGTTACTTaGGGGTTTCTGTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASRGHQARRNTFCCPQTQLQEVT*GFLFTC Trigger: GCAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAG...TTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCTAGCTTGGTGTCCTCTGCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCCACAGTCATCCCTTGGCTCCATTTCCTGAGCTaGGGAGGATGCTGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQGPLFTQRGATSTVIPWLHFLS*GGCCCF Trigger: AAAGCAACAGCATCCTCCTCAGCTCAGGAAATGGAG...CCAAGGGATGACTGTGGAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CCA 90 bp | ACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACAGCCACACTCAGTTCTaGCAGGCTCTCCTTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIVDTVVHGAGEARPPLHSHTQF*QALLVG Trigger: GCCAACAAGGAGAGCCTGCCAGAACTGAGTGTGGCT...GTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CCA 90 bp | GTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCTGGTTCTCTTTGTACTaGTTGGCTCTCAGAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHGAGEARPPLHSERSHLWFSLY*LALRTC Trigger: GCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...GAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCCAATGGTTCTCTTTGTACTaGTTGGCTCTCAGAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAPSTGVRHQGLVSPVPQWFSLY*LALRTC Trigger: GCAGGTTCTGAGAGCCAACCAGTACAAAGAGAACCA...TTGGGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| 3UTR CAA 72 bp | ATCTGCCATGTGCTCTCCTCCCTGAAGGCTTGTGGTTaGGTCCAGGGCAGTGGAGATGATATGGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICHVLSSLKACG*VQGSGDDMGWS Trigger: GCTCCATCCCATATCATCTCCACTGCCCTGGACCAAACCACAAGCCTTCAGGGAGGAGAGCACATGGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTAGAGAGGGACCTCCAAGAGGTTACTTaGGGGTTTCTGTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVLVRGGQIWNSLQLERDLQEVT*GFLFTC Trigger: GCAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAG...GTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR TCA 90 bp | AATGGATGGGGAGGTACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTTTCAGCTTGTTCTGCTaGGCCACACTCAGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGWGGTGEGWADLELTAVFSLFC*ATLSSG Trigger: GCCAGAACTGAGTGTGGCTCAGCAGAACAAGCTGAA...AACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | GCAATGGTACCAATGGATGGGGAGGTACTGGTGAGGGGTGGGCAGATCTGGAACGGTCTTCTAGTTCCCTaGGATTCCTCATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AMVPMDGEVLVRGGQIWNGLLVP*DSSSPG Trigger: ACCTGGAGATGAGGAATCTCAGGGAACTAGAAGACC...GTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATTGGTACCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTAGTCAGCCCAGTGCCCCAACTTGATGAGAGATCCTGGCTGGGCTTAAGACCAGTTTGCCCTGGATaGTGTCAGTGTAGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVSPVPQLDERSWLGLRPVCPG*CQCRQP Trigger: AGGCTGTCTACACTGACATCATCCAGGGCAAACTGG...TCTTAAGCCCAGCCAGGATCTCTCATCAAGTTGGGGCACTGGGCTGACTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | ACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTCCACTTCCAGGAGCTaGTTTCGCTGGTCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TIVDTVVHGAGEARPPLHSTSRS*FRWSSL Trigger: CAAACTGGACCAGCGAAATCAGCTCCTGGAAGTGGA...GTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATGCCAATTCAGCTTGTTCTGCTaGGCCACACTCAGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRAIVGRQSQWVAGSKCQFSLFC*ATLSSG Trigger: GCCAGAACTGAGTGTGGCTCAGCAGAACAAGCTGAA...TTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGAGGACACCAAGCTAGGAGAAACACCTTCTGCTGCCCCCAGACCCAAGGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAEDTKLGETPSAAPRPKDTLHS*CQAHDG Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...CTTGGGTCTGGGGGCAGCAGAAGGTGTTTCTCCTAGCTTGGTGTCCTCTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGGAGGAGCAATCATTTTCCGCAATGGTACCAATGGATGGGGAGGTACTCTCCTTGTTGGCTCCTaGACATTGGCCAACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGGAIIFRNGTNGWGGTLLVGS*TLANSS Trigger: GCTGGAGTTGGCCAATGTTCAGGAGCCAACAAGGAG...AGTACCTCCCCATCCATTGGTACCATTGCGGAAAATGATTGCTCCTCCCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGGTACCAATGGATGGGGAGGTACTGGTGAGGGGTGGGCAGATCTGGAACAGCATTAGCTCCTTCTaGAAGCTCCTGAACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AMVPMDGEVLVRGGQIWNSISSF*KLLNIG Trigger: GCCAATGTTCAGGAGCTTGCAGAAGGAGCTAATGCT...GTTCCAGATCTGCCCACCCCTCACCAGTACCTCCCCATCCATTGGTACCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
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| CDS-3UTR GCA 90 bp | AATCTGCCATGTGCTCTCCTCCCTGAAGGCTTGTGGTTTGGTCCAGGGCAGTGGAGCATTAGCTCCTTCTaGAAGCTCCTGAACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPCALLPEGLWFGPGQWSISSF*KLLNIG Trigger: GCCAATGTTCAGGAGCTTGCAGAAGGAGCTAATGCT...CCACTGCCCTGGACCAAACCACAAGCCTTCAGGGAGGAGAGCACATGGCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| CDS-3UTR GCA 90 bp | GCATCCATTGAGCCCCTGAGTCTGAAGGGAACAACTAGGGAAGGAGGCAAGGGAGCTCTCAGAACCTGCTaGTCAATGCCCAAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASIEPLSLKGTTREGGKGALRTC*SMPKRT Trigger: AGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGC...TCCCTTGCCTCCTTCCCTAGTTGTTCCCTTCAGACTCAGGGGCTCAATGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR GCA 90 bp | ACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACATCTTCTTAGTGGGTTaGCTCTGCTCAGTATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIVDTVVHGAGEARPPLHIFLVG*LCSVWG Trigger: CCCCCATACTGAGCAGAGGCAACCCACTAAGAAGAT...GTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| 3UTR CAA 72 bp | GGACATGTGGCTACCTGGCTAGAGACACTTGCACCATaGTGGATACTGTGGTACATGGGGCTGGAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHVATWLETLAP*WILWYMGLEKQ Trigger: TTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAAGTGTCTCTAGCCAGGTAGCCACATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| CDS-3UTR TCA 90 bp | AAGGAGGCAAGGGAGGAGCAATCATTTTCCGCAATGGTACCAATGGATGGGGAGTGCTGCTCCATTTCCTaGGCTGAGGAGGATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEAREEQSFSAMVPMDGECCSIS*AEEDAV Trigger: AACAGCATCCTCCTCAGCTCAGGAAATGGAGCAGCA...CTCCCCATCCATTGGTACCATTGCGGAAAATGATTGCTCCTCCCTTGCCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR GCA 90 bp | GGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATGCCAAGGATGTCACGGCCAATaGAGAAATCCACTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRAIVGRQSQWVAGSKCQGCHGQ*RNPLPG Trigger: TCCTGGAAGTGGATTTCTGCATTGGCCGTGACATCC...TTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CCA 90 bp | AGACACTTGCACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCAAGCTCCTGAACATTaGCCAACTCCAGCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLHHCGYCGTWGWRSKAQAPEH*PTPAVL Trigger: GAGAACTGCTGGAGTTGGCCAATGTTCAGGAGCTTG...GGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAAGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTAGAGAGGGACGGAAATAGGTCTCTTTGTACTGGTTaGCTCTCAGAACCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRGGQIWNSLQLERDGNRSLCTG*LSEPAA Trigger: AGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGA...CCTATTTCCGTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAAACCCAAAGGTTTAGTAAACATAGCCCAGCACCACATCCCTCCATGGCCTCCACTTCCAGGAGCTaGTTTCGCTGGTCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTQRFSKHSPAPHPSMASTSRS*FRWSSL Trigger: CAAACTGGACCAGCGAAATCAGCTCCTGGAAGTGGA...GGCCATGGAGGGATGTGGTGCTGGGCTATGTTTACTAAACCTTTGGGTTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CCA 90 bp | GGCAAGGGAGGAGCAATCATTTTCCGCAATGGTACCAATGGATGGGGAGGTACTGCAGGCTCTCCTTGTTaGCTATGTAATCCGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GKGGAIIFRNGTNGWGGTAGSPC*LCNPGM Trigger: CATACCCGGATTACATAGCCAACAAGGAGAGCCTGC...AGTACCTCCCCATCCATTGGTACCATTGCGGAAAATGATTGCTCCTCCCTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | CAACTAGGGAAGGAGGCAAGGGAGGAGCAATCATTTTCCGCAATGGTACCAATGCTCCAAGAGGTTACTTaGGGGTTTCTGTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLGKEAREEQSFSAMVPMLQEVT*GFLFTC Trigger: GCAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAG...CATTGGTACCATTGCGGAAAATGATTGCTCCTCCCTTGCCTCCTTCCCTAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGGAGGAGCAATCATTTTCCGCAATGGTACCAATGGATGGGGAGGTACTAGCATTAGCTCCTTCTaGAAGCTCCTGAACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGGAIIFRNGTNGWGGTSISSF*KLLNIG Trigger: GCCAATGTTCAGGAGCTTGCAGAAGGAGCTAATGCT...AGTACCTCCCCATCCATTGGTACCATTGCGGAAAATGATTGCTCCTCCCTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAGATATATCTTGTCCCAGGTCCTTCCTTTCATTTTCTTCACAGCTGCCTAGGAGCCTCTAGCACCTaGCTTATGAGAGTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEIYLVPGPSFHFLHSCLGASST*LMRVVR Trigger: CCTCACCACTCTCATAAGCCAGGTGCTAGAGGCTCC...TAGGCAGCTGTGAAGAAAATGAAAGGAAGGACCTGGGACAAGATATATCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| CDS-3UTR GCA 90 bp | ACATACACATACCCTATCCCACCCCCATATAATCCTCCACACCTACACACACACGCTCTCAGAACCTGCTaGTCAATGCCCAAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TYTYPIPPPYNPPHLHTHALRTC*SMPKRT Trigger: AGTTCTCTTGGGCATTGAGCAGCAGGTTCTGAGAGC...GTGTGTGTGTAGGTGTGGAGGATTATATGGGGGTGGGATAGGGTATGTGTATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| 3UTR CAA 72 bp | ATATGGGATGGAGCCTGGCTGGAGGGGAGATATATCTaGTCCCAGGTCCTTCCTTTCATTTTCTTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWDGAWLEGRYI*SQVLPFIFFTA Trigger: AGCTGTGAAGAAAATGAAAGGAAGGACCTGGGACAAGATATATCTCCCCTCCAGCCAGGCTCCATCCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAAACCCAAAGGTTTAGTAAACATAGCCCAGCACCACATCCCTCCATGGCCGATACACTTCATTCTTaGTGCCAAGCTCACGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTQRFSKHSPAPHPSMADTLHS*CQAHDG Trigger: ACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATC...GGCCATGGAGGGATGTGGTGCTGGGCTATGTTTACTAAACCTTTGGGTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR GCA 90 bp | AGTACAGGGTCTCCATCTCCCCTTAGGAAACAAAATACACACACACATACACACATCTTCTTAGTGGGTTaGCTCTGCTCAGTATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STGSPSPLRKQNTHTHTHIFLVG*LCSVWG Trigger: CCCCCATACTGAGCAGAGGCAACCCACTAAGAAGAT...GTGTGTATGTGTGTGTGTATTTTGTTTCCTAAGGGGAGATGGAGACCCTGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR TCA 90 bp | GTAATCTTATATGTTCTGACCTCTGGCTGCATTCCTAGCACACAAGTAAACCCAGGTCTTCTAGTTCCCTaGGATTCCTCATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VILYVLTSGCIPSTQVNPGLLVP*DSSSPG Trigger: ACCTGGAGATGAGGAATCTCAGGGAACTAGAAGACC...TGGGTTTACTTGTGTGCTAGGAATGCAGCCAGAGGTCAGAACATATAAGATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| CDS-3UTR CCA 90 bp | GTAATCTTATATGTTCTGACCTCTGGCTGCATTCCTAGCACACAAGTAAACCCAGCAGGCTCTCCTTGTTaGCTATGTAATCCGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VILYVLTSGCIPSTQVNPAGSPC*LCNPGM Trigger: CATACCCGGATTACATAGCCAACAAGGAGAGCCTGC...TGGGTTTACTTGTGTGCTAGGAATGCAGCCAGAGGTCAGAACATATAAGATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| CDS-3UTR CCA 90 bp | AGTACAGGGTCTCCATCTCCCCTTAGGAAACAAAATACACACACACATACACACTCTCTTTGTACTGGTTaGCTCTCAGAACCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STGSPSPLRKQNTHTHTHSLCTG*LSEPAA Trigger: AGCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGA...GTGTGTATGTGTGTGTGTATTTTGTTTCCTAAGGGGAGATGGAGACCCTGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| 3UTR CAA 72 bp | ACTGCCTCACAGCCGTCACACCACTCATGCAAGGTCTaGACAATGTTATTGATATCTTTCTTCCGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TASQPSHHSCKV*TMLLISFFRMS Trigger: TGACATCCGGAAGAAAGATATCAATAACATTGTCAAGACCTTGCATGAGTGGTGTGACGGCTGTGAGGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| 3UTR CAA 72 bp | ATTACCTTGCCAGTTGGGAAAAAGATGAACAGTAACTaGCTCACAGTGTGTTCCTGTCTGGGGTCTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITLPVGKKMNSN*LTVCSCLGSRE Trigger: CTCTCTAGACCCCAGACAGGAACACACTGTGAGCAAGTTACTGTTCATCTTTTTCCCAACTGGCAAGGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| 3UTR CAA 72 bp | AAGACTATTATGAACTGTATTGTGCCTACATTCATTTaGAAGGCCTCCACCCTTTTTGAGTGTATTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTIMNCIVPTFI*KASTLFECILE Trigger: TTCTAAAATACACTCAAAAAGGGTGGAGGCCTTCAAAATGAATGTAGGCACAATACAGTTCATAATAGTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| CDS GCA 90 bp | GGCCCGGCGTCCAGCACTTTTCTGTCTCCGCCGACCCGTCACCGGTaGTGTTCCCCCGGAAGCCTCCCACTGCTGCACTCGAGTTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPASSTFLSPPTRHR*CSPGSLPLLHSSSA Trigger: GGCGGAACTCGAGTGCAGCAGTGGGAGGCTTCCGGGGGAACAGCACCGGTGACGGGTCGGCGGAGACAGAAAAGTGCTGGACGCCGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS GCA 90 bp | CGCCGACCCGTCACCGGTGCTGTTCCCCCGGAAGCCTCCCACTGCTaGACTCGAGTTCCGCCTACACAATGTTCCCGCTCTGCTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRPVTGAVPPEASHC*TRVPPTQCSRSAFA Trigger: GGCGAAAGCAGAGCGGGAACATTGTGTAGGCGGAACTCGAGTGCAGCAGTGGGAGGCTTCCGGGGGAACAGCACCGGTGACGGGTCGGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS GCA 90 bp | CTCCGCCGACCCGTCACCGGTGCTGTTCCCCCGGAAGCCTCCCACTaGTGCACTCGAGTTCCGCCTACACAATGTTCCCGCTCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRPVTGAVPPEASH*CTRVPPTQCSRSAF Trigger: GAAAGCAGAGCGGGAACATTGTGTAGGCGGAACTCGAGTGCAGCAGTGGGAGGCTTCCGGGGGAACAGCACCGGTGACGGGTCGGCGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS TCA 90 bp | ATGTCTCGGCCTCCCAGAGCCTGCCTGCAGGTTGTCAAGCTTCCATaGTCGGCCCGGCGTCCAGCACTTTTCTGTCTCCGCCGACCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: MSRPPRACLQVVKLP*SARRPALFCLRRPV Trigger: GACGGGTCGGCGGAGACAGAAAAGTGCTGGACGCCGGGCCGATCATGGAAGCTTGACAACCTGCAGGCAGGCTCTGGGAGGCCGAGACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS GCA 90 bp | ACTCTCTGTTCTCTTCGCCGATGTCTCGGCCTCCCAGAGCCTGCCTaGAGGTTGTCAAGCTTCCATGATCGGCCCGGCGTCCAGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLCSLRRCLGLPEPA*RLSSFHDRPGVQHF Trigger: AAAGTGCTGGACGCCGGGCCGATCATGGAAGCTTGACAACCTGCAGGCAGGCTCTGGGAGGCCGAGACATCGGCGAAGAGAACAGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS-3UTR CAA 90 bp | CTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGAGCCCTTTCGCTGGTCCAGTTaGCCCTGGATGATGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGSRAVLDPVTMASIEPFRWSS*PWMMSV Trigger: CACTGACATCATCCAGGGCAAACTGGACCAGCGAAA...GGGCTCAATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | TGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGAGCCCCCATCTTCTTAGTGGGTaGCCTCTGCTCAGTATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CREAGQCWTLLRWHPLSPHLLSG*PLLSMG Trigger: CCCCATACTGAGCAGAGGCAACCCACTAAGAAGATG...GGGGCTCAATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | ACCCAAGCACCCTCCACTGGTGTCAGACACCAGGGGTTAGTCAGCCCAGTGCCCGCTCCAAGAGGTTACTaGAGGGTTTCTGTTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQAPSTGVRHQGLVSPVPAPRGY*RVSVHL Trigger: CAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAGC...GGGCACTGGGCTGACTAACCCCTGGTGTCTGACACCAGTGGAGGGTGCTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| CDS-3UTR CAA 90 bp | CCACATCCCTCCATGGCCTCAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGTTTCGCTGGTCCAGTTaGCCCTGGATGATGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHPSMASTGTANRGKAGEFRWSS*PWMMSV Trigger: CACTGACATCATCCAGGGCAAACTGGACCAGCGAAA...CTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTGAGGCCATGGAGGGATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | CAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGGGGACATGTGGCTACCTGGCATCTTCTTAGTGGGTaGCCTCTGCTCAGTATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLALPTGVRQERGHVATWHLLSG*PLLSMG Trigger: CCCCATACTGAGCAGAGGCAACCCACTAAGAAGATG...CCAGGTAGCCACATGTCCCCTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS GCA 90 bp | CTCCCACTGCTGCACTCGAGTTCCGCCTACACAATGTTCCCGCTCTaGTTTCGCCACCTCCCACCTAGATTGAGGCATGGTTTGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLHSSSAYTMFPL*FRHLPPRLRHGLQT Trigger: AGTCTGCAAACCATGCCTCAATCTAGGTGGGAGGTGGCGAAAGCAGAGCGGGAACATTGTGTAGGCGGAACTCGAGTGCAGCAGTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS-3UTR CAA 90 bp | CAACTGGCACTGCCAACAGGGGTAAGGCAGGAGAGGGGACATGTGGCTACCTGGGCTCCAAGAGGTTACTaGAGGGTTTCTGTTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLALPTGVRQERGHVATWAPRGY*RVSVHL Trigger: CAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAGC...CCAGGTAGCCACATGTCCCCTCTCCTGCCTTACCCCTGTTGGCAGTGCCAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACAACTGGGAGGGAGGTAGCCCATCACAGAGACAAGGACCCCTGCAGGGATCTGGCAGGCTCTCCTaGTTGGCTCCTGAACATTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNNWEGGSPSQRQGPLQGSGRLS*LAPEHW Trigger: CCAATGTTCAGGAGCCAACAAGGAGAGCCTGCCAGA...TCCCTGCAGGGGTCCTTGTCTCTGTGATGGGCTACCTCCCTCCCAGTTGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGAGAGCCACTGGTACCTTaGGCTAATAAAATGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRDKDPCREAGQCWTLLREPLVP*ANKMNC Trigger: GCAGTTCATTTTATTAGCCAAAGGTACCAGTGGCTC...TCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATGCCAAGGCAGGCTCTCCTTGTaGGCTCCTGAACATTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRAIVGRQSQWVAGSKCQGRLSL*APEHWP Trigger: TGGCCAATGTTCAGGAGCCAACAAGGAGAGCCTGCC...TTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138280.8 |
||
| CDS TCA 90 bp | AAGAGGTTACTTGAGGGTTTCTGTTCACCTGCCATTCTCTGGTCTTaGGATCGGAAGGGGCAGACCGAAGGCAGCCACCGCGTGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: KRLLEGFCSPAILWS*DRKGQTEGSHRVEC Trigger: ACATTCCACGCGGTGGCTGCCTTCGGTCTGCCCCTTCCGATCTCAAGACCAGAGAATGGCAGGTGAACAGAAACCCTCAAGTAACCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
||
| CDS-3UTR CAA 90 bp | ACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACCGGTGGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TIVDTVVHGAGEARPPLHRWWFS*YWLALR Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACCACCG...GTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CAA 90 bp | GGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATGGCATCCATTGAGGATGCTGTTGCTTaGAGTGTCTTCTTAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLQGSRAVLDPVTMASIEDAVA*SVFLML Trigger: CAACATTAAGAAGACACTCAAAGCAACAGCATCCTC...AATGGATGCCATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CAA 90 bp | TTGCACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTTCTCTTTGTACTGGTaGGCTCTCAGAACCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHHCGYCGTWGWRSKAPSFSLYW*ALRTCC Trigger: GCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAA...AGAGGGGGCCTTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGCAATTGTTGGCAGACAATCCCAGTGGGTAGCTGGGTCGAAATGCCAAGCTCCAAGAGGTTACTaGAGGGTTTCTGTTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRAIVGRQSQWVAGSKCQAPRGY*RVSVHL Trigger: CAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAGC...TTGGCATTTCGACCCAGCTACCCACTGGGATTGTCTGCCAACAATTGCTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGTGAGGGGTGGGCAGATCTGGAACTCACTGCAGTTAGAGAGGGACGGAAAGGATACACTTCATTCTaGATGCCAAGCTCACGATGG | + |
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Preference number: 5 (lower is better) Translates to: TGEGWADLELTAVREGRKGYTSF*MPSSRW Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...TTTCCGTCCCTCTCTAACTGCAGTGAGTTCCAGATCTGCCCACCCCTCACCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | GTACATGGGGCTGGAGAAGCAAGGCCCCCTCTTCACTCAGAGAGGAGCCACCTCCACTCATGCAAGGTCTaGACAATGTTATTGATATCT | + |
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Preference number: 5 (lower is better) Translates to: VHGAGEARPPLHSERSHLHSCKV*TMLLIS Trigger: AGATATCAATAACATTGTCAAGACCTTGCATGAGTG...GAGGTGGCTCCTCTCTGAGTGAAGAGGGGGCCTTGCTTCTCCAGCCCCATGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | ACAGAGACAAGGACCCCTGCAGGGAAGCCGGGCAGTGCTGGACCCTGTTACGATCACTCATGCAAGGTCTaGACAATGTTATTGATATCT | + |
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Preference number: 5 (lower is better) Translates to: TETRTPAGKPGSAGPCYDHSCKV*TMLLIS Trigger: AGATATCAATAACATTGTCAAGACCTTGCATGAGTG...ATCGTAACAGGGTCCAGCACTGCCCGGCTTCCCTGCAGGGGTCCTTGTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCTTTTCTCTGGCCAGGAGTGGAGTATGATGTCATCAGAGGGCTCTGGTTCTCTTTGTACTGGTaGGCTCTCAGAACCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SSPFLWPGVEYDVIRGLWFSLYW*ALRTCC Trigger: GCAGCAGGTTCTGAGAGCCAACCAGTACAAAGAGAA...CCAGAGCCCTCTGATGACATCATACTCCACTCCTGGCCAGAGAAAAGGACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | CAAAGACCTAGTAGTGAGATCAATGTGGGCATGGGCTTCATCCCAGAGATGCCTCGGTGGTGGTTCTCTTaGTACTGGTTGGCTCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: QRPSSEINVGMGFIPEMPRWWFS*YWLALR Trigger: TCTGAGAGCCAACCAGTACAAAGAGAACCACCACCG...AGGCATCTCTGGGATGAAGCCCATGCCCACATTGATCTCACTACTAGGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | CTAGAGACACTTGCACCATTGTGGATACTGTGGTACATGGGGCTGGAGAAGCAAGCTCCAAGAGGTTACTaGAGGGTTTCTGTTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: LETLAPLWILWYMGLEKQAPRGY*RVSVHL Trigger: CAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAGC...TTGCTTCTCCAGCCCCATGTACCACAGTATCCACAATGGTGCAAGTGTCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 |
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| CDS-3UTR CAA 90 bp | TGGAGGGCATGTACAAGCAAAGAAGGGTCACAGTGGACCCCCAGCAAGCACAGAGAGGATGCTGTTGCTTaGAGTGTCTTCTTAATGTTG | + |
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Preference number: 5 (lower is better) Translates to: WRACTSKEGSQWTPSKHREDAVA*SVFLML Trigger: CAACATTAAGAAGACACTCAAAGCAACAGCATCCTC...TCTGTGCTTGCTGGGGGTCCACTGTGACCCTTCTTTGCTTGTACATGCCCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| CDS GCA 90 bp | GTGGTGAGGGCTGAGCCACTGGTACCTTTGGCTAATAAAATGAACTaGTCCAAGAGGTTACTTGAGGGTTTCTGTTCACCTGCCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: VVRAEPLVPLANKMN*SKRLLEGFCSPAIL Trigger: GAGAATGGCAGGTGAACAGAAACCCTCAAGTAACCTCTTGGAGCAGTTCATTTTATTAGCCAAAGGTACCAGTGGCTCAGCCCTCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS CCA 90 bp | GATGGTAAGATGCTTCAGCTTGTTCTGCTGAGCCACACTCAGTTCTaGCAGGCTCTCCTTGTTGGCTATGTAATCCGGGTATGTACCATA | + |
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Preference number: 5 (lower is better) Translates to: DGKMLQLVLLSHTQF*QALLVGYVIRVCTI Trigger: TATGGTACATACCCGGATTACATAGCCAACAAGGAGAGCCTGCCAGAACTGAGTGTGGCTCAGCAGAACAAGCTGAAGCATCTTACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS-3UTR CAA 90 bp | GTAATCTTATATGTTCTGACCTCTGGCTGCATTCCTAGCACACAAGTAAACCCAGGATACACTTCATTCTaGATGCCAAGCTCACGATGG | + |
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Preference number: 5 (lower is better) Translates to: VILYVLTSGCIPSTQVNPGYTSF*MPSSRW Trigger: CCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCC...TGGGTTTACTTGTGTGCTAGGAATGCAGCCAGAGGTCAGAACATATAAGATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121534.8 |
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| CDS GCA 72 bp | CCCGTCACCGGTGCTGTTCCCCCGGAAGCCTCCCACTaGTGCACTCGAGTTCCGCCTACACAATGTTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PVTGAVPPEASH*CTRVPPTQCSR Trigger: GCGGGAACATTGTGTAGGCGGAACTCGAGTGCAGCAGTGGGAGGCTTCCGGGGGAACAGCACCGGTGACGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS GCA 72 bp | TCCAGCACTTTTCTGTCTCCGCCGACCCGTCACCGGTaGTGTTCCCCCGGAAGCCTCCCACTGCTGCACTCG | + |
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Preference number: 6 (lower is better) Translates to: SSTFLSPPTRHR*CSPGSLPLLHS Trigger: CGAGTGCAGCAGTGGGAGGCTTCCGGGGGAACAGCACCGGTGACGGGTCGGCGGAGACAGAAAAGTGCTGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS TCA 72 bp | CCTCCCAGAGCCTGCCTGCAGGTTGTCAAGCTTCCATaGTCGGCCCGGCGTCCAGCACTTTTCTGTCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PPRACLQVVKLP*SARRPALFCLR Trigger: GCGGAGACAGAAAAGTGCTGGACGCCGGGCCGATCATGGAAGCTTGACAACCTGCAGGCAGGCTCTGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS GCA 72 bp | GTCACCGGTGCTGTTCCCCCGGAAGCCTCCCACTGCTaGACTCGAGTTCCGCCTACACAATGTTCCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VTGAVPPEASHC*TRVPPTQCSRS Trigger: AGAGCGGGAACATTGTGTAGGCGGAACTCGAGTGCAGCAGTGGGAGGCTTCCGGGGGAACAGCACCGGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS CAA 90 bp | TGTTCTCTTCGCCGATGTCTCGGCCTCCCAGAGCCTGCCTGCAGGTaGTCAAGCTTCCATGATCGGCCCGGCGTCCAGCACTTTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CSLRRCLGLPEPACR*SSFHDRPGVQHFSV Trigger: GACAGAAAAGTGCTGGACGCCGGGCCGATCATGGAAGCTTGACAACCTGCAGGCAGGCTCTGGGAGGCCGAGACATCGGCGAAGAGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS TCA 72 bp | CTTGAGGGTTTCTGTTCACCTGCCATTCTCTGGTCTTaGGATCGGAAGGGGCAGACCGAAGGCAGCCACCGC | + |
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Preference number: 6 (lower is better) Translates to: LEGFCSPAILWS*DRKGQTEGSHR Trigger: GCGGTGGCTGCCTTCGGTCTGCCCCTTCCGATCTCAAGACCAGAGAATGGCAGGTGAACAGAAACCCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS GCA 72 bp | CTGCACTCGAGTTCCGCCTACACAATGTTCCCGCTCTaGTTTCGCCACCTCCCACCTAGATTGAGGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: LHSSSAYTMFPL*FRHLPPRLRHG Trigger: ACCATGCCTCAATCTAGGTGGGAGGTGGCGAAAGCAGAGCGGGAACATTGTGTAGGCGGAACTCGAGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS CAA 72 bp | ATGTTCCCGCTCTGCTTTCGCCACCTCCCACCTAGATaGAGGCATGGTTTGCAGACTCCTGAGTTCCATGTA | + |
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Preference number: 6 (lower is better) Translates to: MFPLCFRHLPPR*RHGLQTPEFHV Trigger: TACATGGAACTCAGGAGTCTGCAAACCATGCCTCAATCTAGGTGGGAGGTGGCGAAAGCAGAGCGGGAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS CAA 90 bp | GCCTACACAATGTTCCCGCTCTGCTTTCGCCACCTCCCACCTAGATaGAGGCATGGTTTGCAGACTCCTGAGTTCCATGTAAACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AYTMFPLCFRHLPPR*RHGLQTPEFHVNRS Trigger: ACTTCTGTTTACATGGAACTCAGGAGTCTGCAAACCATGCCTCAATCTAGGTGGGAGGTGGCGAAAGCAGAGCGGGAACATTGTGTAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS CCA 72 bp | ATGCTTCAGCTTGTTCTGCTGAGCCACACTCAGTTCTaGCAGGCTCTCCTTGTTGGCTATGTAATCCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: MLQLVLLSHTQF*QALLVGYVIRV Trigger: TACCCGGATTACATAGCCAACAAGGAGAGCCTGCCAGAACTGAGTGTGGCTCAGCAGAACAAGCTGAAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 |
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| CDS GCA 72 bp | GTTCAGCAACTGCAAATACGCAGCATTAGCTCCTTCTaGAAGCTCCTGAACATTGGCCAACTCCAGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VQQLQIRSISSF*KLLNIGQLQQF Trigger: GAACTGCTGGAGTTGGCCAATGTTCAGGAGCTTGCAGAAGGAGCTAATGCTGCGTATTTGCAGTTGCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 |
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| CDS GCA 72 bp | GGGTTGTCACGTCTCCGGGGTAAAAGAAGACCTTCCTaGTGGGTTTCAAGTAACAGGATTCAGAAACCAACC | + |
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Preference number: 6 (lower is better) Translates to: GLSRLRGKRRPS*WVSSNRIQKPT Trigger: GGTTGGTTTCTGAATCCTGTTACTTGAAACCCAGCAGGAAGGTCTTCTTTTACCCCGGAGACGTGACAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149542.2 |
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| CDS CAA 90 bp | AGCACCTGGCTTATGAGAGTGGTGAGGGCTGAGCCACTGGTACCTTaGGCTAATAAAATGAACTGCTCCAAGAGGTTACTTGAGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: STWLMRVVRAEPLVP*ANKMNCSKRLLEGF Trigger: GAAACCCTCAAGTAACCTCTTGGAGCAGTTCATTTTATTAGCCAAAGGTACCAGTGGCTCAGCCCTCACCACTCTCATAAGCCAGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 ENSMUST00000149542.2 |
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| CDS GCA 72 bp | GCTGAGCCACTGGTACCTTTGGCTAATAAAATGAACTaGTCCAAGAGGTTACTTGAGGGTTTCTGTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: AEPLVPLANKMN*SKRLLEGFCSP Trigger: AGGTGAACAGAAACCCTCAAGTAACCTCTTGGAGCAGTTCATTTTATTAGCCAAAGGTACCAGTGGCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 ENSMUST00000149542.2 |
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| CDS CAA 72 bp | CTTATGAGAGTGGTGAGGGCTGAGCCACTGGTACCTTaGGCTAATAAAATGAACTGCTCCAAGAGGTTACTT | + |
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Preference number: 6 (lower is better) Translates to: LMRVVRAEPLVP*ANKMNCSKRLL Trigger: AAGTAACCTCTTGGAGCAGTTCATTTTATTAGCCAAAGGTACCAGTGGCTCAGCCCTCACCACTCTCATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027446.11 ENSMUST00000121534.8 ENSMUST00000122884.2 ENSMUST00000138280.8 ENSMUST00000149542.2 |
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