Pregenerated sensors for COPS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019494Ensembl transcript IDs: ENSMUST00000019638.15, ENSMUST00000110951.8, ENSMUST00000132639.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR-3UTR CCA 90 bp | ACCATCATCAGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTTGTCGGTCGTACGTCATTGCATTGCTaGGAGGGAACACAAAGAACC | + |
Preference number: 2 (lower is better) Translates to: TIIRKTVPAFAGQCLVGRTSLHC*EGTQRT Trigger: GGTTCTTTGTGTTCCCTCCCAGCAATGCAATGACGT...ACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCTGATGATGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR CAA 90 bp | GAACCATCATCAGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTaGTCGGTCGTAGAGGACGTTGAACTTGTTCACAAACTGGTTCAT | + |
Preference number: 2 (lower is better) Translates to: EPSSEKQSPHSPANA*SVVEDVELVHKLVH Trigger: ATGAACCAGTTTGTGAACAAGTTCAACGTCCTCTACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCTGATGATGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR-3UTR TCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCCATGGAACAGCTGTCTaGGCCCCACACACCATCCCT | + |
Preference number: 2 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPHGTAV*APHTIP Trigger: AGGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATG...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR-3UTR TCA 90 bp | AGGACGTTGAACTTGTTCACAAACTGGTTCATTGTGTTGCACGTTTTGGTGATGTGCCGAGGTAGGCCATaGGCCCCACGTCATTGCATT | + |
Preference number: 2 (lower is better) Translates to: RTLNLFTNWFIVLHVLVMCRGRP*APRHCI Trigger: AATGCAATGACGTGGGGCTCATGGCCTACCTCGGCA...CATCACCAAAACGTGCAACACAATGAACCAGTTTGTGAACAAGTTCAACGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR-3UTR CCA 90 bp | AGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTTGTCGGTCGTAGAGGACGTAACTTGTTCACAAACTaGTTCATTGTGTTGCACGTT | + |
Preference number: 2 (lower is better) Translates to: RKTVPAFAGQCLVGRRGRNLFTN*FIVLHV Trigger: AACGTGCAACACAATGAACCAGTTTGTGAACAAGTT...ACGTCCTCTACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR-3UTR TCA 90 bp | GTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTAAAAACCAGTGTGGTGCCTaGGAGGACAAAGCCACTGGA | + |
Preference number: 2 (lower is better) Translates to: VVLSHFVYFNKGSPRVIKNQCGA*EDKATG Trigger: TCCAGTGGCTTTGTCCTCTCAGGCACCACACTGGTT...TTTAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR CAA 90 bp | GTGCTAGTCAATCTGGGAGATAGAAGGCCTTGGGACCACTGTTTCTaGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCCAC | + |
Preference number: 2 (lower is better) Translates to: VLVNLGDRRPWDHCF*RCFQLWTFRLLDPH Trigger: GTGGGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTCCCAAGGCCTTCTATCTCCCAGATTGACTAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR-3UTR GCA 90 bp | ACGTTGAACTTGTTCACAAACTGGTTCATTGTGTTGCACGTTTTGGTGATGGTGCCCACGTCATTGCATTaGTGGGAGGGAACACAAAGA | + |
Preference number: 2 (lower is better) Translates to: TLNLFTNWFIVLHVLVMVPTSLH*WEGTQR Trigger: TCTTTGTGTTCCCTCCCAGCAATGCAATGACGTGGG...CACCATCACCAAAACGTGCAACACAATGAACCAGTTTGTGAACAAGTTCAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR-3UTR TCA 90 bp | GTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTAAACTTAAGAGTCCATGTTaGGAAACCAGTGTGGTGCCT | + |
Preference number: 2 (lower is better) Translates to: VVLSHFVYFNKGSPRVIKLKSPC*ETSVVP Trigger: AGGCACCACACTGGTTTCTCAACATGGACTCTTAAG...TTTAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR-3UTR TCA 90 bp | GGACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCTGTGGAGCTGTGACATaGATTGATCACAGAGCACAA | + |
Preference number: 2 (lower is better) Translates to: GPLFLEMLPIMDISFVRPCGAVT*IDHRAQ Trigger: TTGTGCTCTGTGATCAATTCATGTCACAGCTCCACA...GGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR-3UTR CCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCTCTCTAAAGGGAATGTaGTACTCAGGTCCATGGAAC | + |
Preference number: 2 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPSLKGM*YSGPWN Trigger: GTTCCATGGACCTGAGTACCACATTCCCTTTAGAGA...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR-3UTR CCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCCCACAATTACAAAGATaGAATTCAGCTTCCCTCCCC | + |
Preference number: 2 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPPQLQR*NSASLP Trigger: GGGGAGGGAAGCTGAATTCCATCTTTGTAATTGTGG...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR-3UTR GCA 90 bp | GTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTAAAGGGCTGCTAAGGGGCTaGTCTTTTATTAATGAGTTT | + |
Preference number: 2 (lower is better) Translates to: VVLSHFVYFNKGSPRVIKGLLRG*SFINEF Trigger: AAACTCATTAATAAAAGAGCAGCCCCTTAGCAGCCC...TTTAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR CAA 90 bp | AACCACAATTACAAAGATGGAATTCAGCTTCCCTCCCCTTCCTATTaGAGAAACATTTGCAGTGAAATTAAATTAGCCTGGGAAAGCAAT | + |
Preference number: 2 (lower is better) Translates to: NHNYKDGIQLPSPSY*RNICSEIKLAWESN Trigger: ATTGCTTTCCCAGGCTAATTTAATTTCACTGCAAATGTTTCTCAAATAGGAAGGGGAGGGAAGCTGAATTCCATCTTTGTAATTGTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR-3UTR CAA 90 bp | ATCAGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTTGTCGGTCGTAGAGGACCCCACGTCATTGCATaGCTGGGAGGGAACACAAAG | + |
Preference number: 3 (lower is better) Translates to: IRKTVPAFAGQCLVGRRGPHVIA*LGGNTK Trigger: CTTTGTGTTCCCTCCCAGCAATGCAATGACGTGGGG...TCCTCTACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR-3UTR CAA 90 bp | GTTGAACTTGTTCACAAACTGGTTCATTGTGTTGCACGTTTTGGTGATGGTGCCATGAGCCCCACGTCATaGCATTGCTGGGAGGGAACA | + |
Preference number: 3 (lower is better) Translates to: VELVHKLVHCVARFGDGAMSPTS*HCWEGT Trigger: TGTTCCCTCCCAGCAATGCAATGACGTGGGGCTCAT...GGCACCATCACCAAAACGTGCAACACAATGAACCAGTTTGTGAACAAGTTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR TCA 72 bp | GGGAAAGCAATCTTTCTGTGGAGCTGTGACATGAATTaGTCACAGAGCACAAAAACTGGAAGCAAGCAGGTC | + |
Preference number: 3 (lower is better) Translates to: GKAIFLWSCDMN*SQSTKTGSKQV Trigger: GACCTGCTTGCTTCCAGTTTTTGTGCTCTGTGATCAATTCATGTCACAGCTCCACAGAAAGATTGCTTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR TCA 72 bp | AGCCTGGGAAAGCAATCTTTCTGTGGAGCTGTGACATaGATTGATCACAGAGCACAAAAACTGGAAGCAAGC | + |
Preference number: 3 (lower is better) Translates to: SLGKQSFCGAVT*IDHRAQKLEAS Trigger: GCTTGCTTCCAGTTTTTGTGCTCTGTGATCAATTCATGTCACAGCTCCACAGAAAGATTGCTTTCCCAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR CCA 72 bp | TACTATGTGCTAGTCAATCTGGGAGATAGAAGGCCTTaGGACCACTGTTTCTTGAGATGCTTCCAATTATGG | + |
Preference number: 3 (lower is better) Translates to: YYVLVNLGDRRP*DHCFLRCFQLW Trigger: CCATAATTGGAAGCATCTCAAGAAACAGTGGTCCCAAGGCCTTCTATCTCCCAGATTGACTAGCACATAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR TCA 72 bp | AAATTAGCCTGGGAAAGCAATCTTTCTGTGGAGCTGTaGCATGAATTGATCACAGAGCACAAAAACTGGAAG | + |
Preference number: 3 (lower is better) Translates to: KLAWESNLSVEL*HELITEHKNWK Trigger: CTTCCAGTTTTTGTGCTCTGTGATCAATTCATGTCACAGCTCCACAGAAAGATTGCTTTCCCAGGCTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | GGTGATGGTGCCGAGGTAGGCCATGAGCCCCACGTCATTGCATTGCTGGGAGGGTGGAGTTCTCCCCACTaGCTGTTGCTGTCATCCGGG | + |
Preference number: 4 (lower is better) Translates to: GDGAEVGHEPHVIALLGGWSSPH*LLLSSG Trigger: CCCGGATGACAGCAACAGGCAGTGGGGAGAACTCCA...CCCTCCCAGCAATGCAATGACGTGGGGCTCATGGCCTACCTCGGCACCATCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR CCA 90 bp | AGTGTGGTGCCTGAGAGGACAAAGCCACTGGAAGGGCTGCTAAGGGGCTGCTCTATAGGCCGCCCCTCCTaGGAGCGCATGCGGATCCAA | + |
Preference number: 4 (lower is better) Translates to: SVVPERTKPLEGLLRGCSIGRPS*ERMRIQ Trigger: TTGGATCCGCATGCGCTCCCAGGAGGGGCGGCCTAT...AGAGCAGCCCCTTAGCAGCCCTTCCAGTGGCTTTGTCCTCTCAGGCACCACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCCTCCCCACTGCCTGTTaGTGTCATCCGGGCCACGTG | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPLPTAC*CHPGHV Trigger: CACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAG...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | AGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTTGTCGGTCGTAGAGGACGTCTCCCCACTGCCTGTTaGTGTCATCCGGGCCACGTG | + |
Preference number: 4 (lower is better) Translates to: RKTVPAFAGQCLVGRRGRLPTAC*CHPGHV Trigger: CACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAG...ACGTCCTCTACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
3UTR CAA 72 bp | GGTGCCGAGGTAGGCCATGAGCCCCACGTCATTGCATaGCTGGGAGGGAACACAAAGAACCAGTTCCCCAGG | + |
Preference number: 4 (lower is better) Translates to: GAEVGHEPHVIA*LGGNTKNQFPR Trigger: CCTGGGGAACTGGTTCTTTGTGTTCCCTCCCAGCAATGCAATGACGTGGGGCTCATGGCCTACCTCGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR TCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCTGCCGAGGTAGGCCATaGGCCCCACGTCATTGCATT | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPCRGRP*APRHCI Trigger: AATGCAATGACGTGGGGCTCATGGCCTACCTCGGCA...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCTGGAGTTCTCCCCACTaGCTGTTGCTGTCATCCGGG | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPWSSPH*LLLSSG Trigger: CCCGGATGACAGCAACAGGCAGTGGGGAGAACTCCA...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCGCATTCGCCGGCCAATaGCTTGTCGGTCGTAGAGGA | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPAFAGQ*LVGRRG Trigger: TCCTCTACGACCGACAAGGCATTGGCCGGCGAATGC...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATATAGGCCGCCCCTCCTaGGAGCGCATGCGGATCCAA | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHIGRPS*ERMRIQ Trigger: TTGGATCCGCATGCGCTCCCAGGAGGGGCGGCCTAT...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCGGTGTTCAGCCACAGTaGAGTTCTCCCCACTGCCTG | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPGVQPQ*SSPHCL Trigger: CAGGCAGTGGGGAGAACTCCACTGTGGCTGAACACC...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | AGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTTGTCGGTCGTAGAGGACGTGGTGTTCAGCCACAGTaGAGTTCTCCCCACTGCCTG | + |
Preference number: 4 (lower is better) Translates to: RKTVPAFAGQCLVGRRGRGVQPQ*SSPHCL Trigger: CAGGCAGTGGGGAGAACTCCACTGTGGCTGAACACC...ACGTCCTCTACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR TCA 90 bp | AGTGTGGTGCCTGAGAGGACAAAGCCACTGGAAGGGCTGCTAAGGGGCTGCTCTAGGATGACAAGGGGATaGAGAGCGACGGAAACACTC | + |
Preference number: 4 (lower is better) Translates to: SVVPERTKPLEGLLRGCSRMTRG*RATETL Trigger: GAGTGTTTCCGTCGCTCTTCATCCCCTTGTCATCCT...AGAGCAGCCCCTTAGCAGCCCTTCCAGTGGCTTTGTCCTCTCAGGCACCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCTCCTGGGAGCGCATaGGGATCCAATGGTCTGAGA | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHPPGSA*GSNGLR Trigger: TCTCAGACCATTGGATCCGCATGCGCTCCCAGGAGG...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATGCATTCGCCGGCCAATaGCTTGTCGGTCGTAGAGGA | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHAFAGQ*LVGRRG Trigger: TCCTCTACGACCGACAAGGCATTGGCCGGCGAATGC...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCTCACACACCTGCTTATaGACGTGGATGTCTGAGGGG | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPSHTCL*TWMSEG Trigger: CCCCTCAGACATCCACGTCCATAAGCAGGTGTGTGA...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCTTGATGGCACTATGCTaGGCTATCAGGTGTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPLMALC*AIRCSA Trigger: GGCTGAACACCTGATAGCTCAGCATAGTGCCATCAA...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATTGTTGCACGTTTTGGTaGTGGTGCCGAGGTAGGCCA | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHCCTFW*WCRGRP Trigger: TGGCCTACCTCGGCACCATCACCAAAACGTGCAACA...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATATATTTCGCCCCTCCTaGTTCCCGATCAGAGCCCCA | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHIFRPS*FPIRAP Trigger: TGGGGCTCTGATCGGGAAGCAGGAGGGGCGAAATAT...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATAGGATGACAAGGGGATaGAGAGCGACGGAAACACTC | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHRMTRG*RATETL Trigger: GAGTGTTTCCGTCGCTCTTCATCCCCTTGTCATCCT...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | ATCAGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTTGTCGGTCGTAGAGGATGGCCAGAGTGTAAGTaGGCTCAGCAAACAGCATTG | + |
Preference number: 4 (lower is better) Translates to: IRKTVPAFAGQCLVGRRGWPECK*AQQTAL Trigger: CAATGCTGTTTGCTGAGCTCACTTACACTCTGGCCA...TCCTCTACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR TCA 90 bp | GTAGGCCATGAGCCCCACGTCATTGCATTGCTGGGAGGGAACACAAAGAACCAGTTGATGGCACTATGCTaGGCTATCAGGTGTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: VGHEPHVIALLGGNTKNQLMALC*AIRCSA Trigger: GGCTGAACACCTGATAGCTCAGCATAGTGCCATCAA...CTGGTTCTTTGTGTTCCCTCCCAGCAATGCAATGACGTGGGGCTCATGGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR TCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATGGCTGTGCAGCATCTTaGTGGCACTATGCTGAGCTA | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHGCAAS*WHYAEL Trigger: TAGCTCAGCATAGTGCCATCAAGATGCTGCACAGCC...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | GTAGGCCATGAGCCCCACGTCATTGCATTGCTGGGAGGGAACACAAAGAACCAGGAAGGGAACCTCTCCTaGTTCAGAGGCCTTGACATA | + |
Preference number: 4 (lower is better) Translates to: VGHEPHVIALLGGNTKNQEGNLS*FRGLDI Trigger: TATGTCAAGGCCTCTGAAGCAGGAGAGGTTCCCTTC...CTGGTTCTTTGTGTTCCCTCCCAGCAATGCAATGACGTGGGGCTCATGGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR CCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCCGCATGCGGATCCAATaGTCTGAGATGTTAAGGATG | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPRMRIQ*SEMLRM Trigger: CATCCTTAACATCTCAGACCATTGGATCCGCATGCG...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | AGGGAACACAAAGAACCAGTTCCCCAGGGGTCCCTCGTATTAGCCAGTGACACTAGCTTCACACGGCTGTaGAGCATCTTGATGGCACTA | + |
Preference number: 4 (lower is better) Translates to: REHKEPVPQGSLVLASDTSFTRL*SILMAL Trigger: TAGTGCCATCAAGATGCTGCACAGCCGTGTGAAGCT...AGTGTCACTGGCTAATACGAGGGACCCCTGGGGAACTGGTTCTTTGTGTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR GCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATGAAGGGAACCTCTCCTaGTTCAGAGGCCTTGACATA | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHEGNLS*FRGLDI Trigger: TATGTCAAGGCCTCTGAAGCAGGAGAGGTTCCCTTC...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATGCGGATCCAATGGTCTaGGATGTTAAGGATGACAAG | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHADPMV*DVKDDK Trigger: CTTGTCATCCTTAACATCTCAGACCATTGGATCCGC...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
3UTR CAA 72 bp | TCAGAAAAACAGTCCCCGCATTCGCCGGCCAATGCCTaGTCGGTCGTAGAGGACGTTGAACTTGTTCACAAA | + |
Preference number: 4 (lower is better) Translates to: SEKQSPHSPANA*SVVEDVELVHK Trigger: TTTGTGAACAAGTTCAACGTCCTCTACGACCGACAAGGCATTGGCCGGCGAATGCGGGGACTGTTTTTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR GCA 90 bp | GGACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCACGCTGGGGACTGCTaGATCCACTTCCATGCCGCT | + |
Preference number: 4 (lower is better) Translates to: GPLFLEMLPIMDISFVRPHAGDC*IHFHAA Trigger: AGCGGCATGGAAGTGGATGCAGCAGTCCCCAGCGTG...GGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATACAGGAAGATCTGTGTaGTTGGTCATAGGGTTCAAC | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHTGRSV*LVIGFN Trigger: GTTGAACCCTATGACCAAGCACACAGATCTTCCTGT...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | AAACAAGGACTTGAGATAACCACAATTACAAAGATGGAATTCAGCTTCCCTCCCCTCCCCACTGCCTGTTaGTGTCATCCGGGCCACGTG | + |
Preference number: 4 (lower is better) Translates to: KQGLEITTITKMEFSFPPLPTAC*CHPGHV Trigger: CACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAG...GGGAGGGAAGCTGAATTCCATCTTTGTAATTGTGGTTATCTCAAGTCCTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR TCA 90 bp | GAACTTGTTCACAAACTGGTTCATTGTGTTGCACGTTTTGGTGATGGTGCCGAGGGCTGTGCAGCATCTTaGTGGCACTATGCTGAGCTA | + |
Preference number: 4 (lower is better) Translates to: ELVHKLVHCVARFGDGAEGCAAS*WHYAEL Trigger: TAGCTCAGCATAGTGCCATCAAGATGCTGCACAGCC...CTCGGCACCATCACCAAAACGTGCAACACAATGAACCAGTTTGTGAACAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132639.2 |
||
CDS-3UTR GCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCCCTCCTGGGAGCGCATaGGGATCCAATGGTCTGAGA | + |
Preference number: 4 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPPPGSA*GSNGLR Trigger: TCTCAGACCATTGGATCCGCATGCGCTCCCAGGAGG...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTTGGAGTTCTCCCCACTaGCTGTTGCTGTCATCCGGG | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSWSSPH*LLLSSG Trigger: CCCGGATGACAGCAACAGGCAGTGGGGAGAACTCCA...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGGTGTTCAGCCACAGTaGAGTTCTCCCCACTGCCTG | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSGVQPQ*SSPHCL Trigger: CAGGCAGTGGGGAGAACTCCACTGTGGCTGAACACC...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | GGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCAACTTGTTCACAAACTaGTTCATTGTGTTGCACGTT | + |
Preference number: 4 (lower is better) Translates to: GMWYSGPWNSCLSPTHHPNLFTN*FIVLHV Trigger: AACGTGCAACACAATGAACCAGTTTGTGAACAAGTT...GGGATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | AAACAAGGACTTGAGATAACCACAATTACAAAGATGGAATTCAGCTTCCCTCCCTGCCGAGGTAGGCCATaGGCCCCACGTCATTGCATT | + |
Preference number: 4 (lower is better) Translates to: KQGLEITTITKMEFSFPPCRGRP*APRHCI Trigger: AATGCAATGACGTGGGGCTCATGGCCTACCTCGGCA...GGGAGGGAAGCTGAATTCCATCTTTGTAATTGTGGTTATCTCAAGTCCTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | AAACAAGGACTTGAGATAACCACAATTACAAAGATGGAATTCAGCTTCCCTCCCCATCACGCTGGGGACTaGTGCATCCACTTCCATGCC | + |
Preference number: 4 (lower is better) Translates to: KQGLEITTITKMEFSFPPHHAGD*CIHFHA Trigger: GGCATGGAAGTGGATGCAGCAGTCCCCAGCGTGATG...GGGAGGGAAGCTGAATTCCATCTTTGTAATTGTGGTTATCTCAAGTCCTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR TCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCGGCTGTGCAGCATCTTaGTGGCACTATGCTGAGCTA | + |
Preference number: 4 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPGCAAS*WHYAEL Trigger: TAGCTCAGCATAGTGCCATCAAGATGCTGCACAGCC...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR CCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTTTCTCTTCCACGGTGTaGGACAGCAGCTCAAAGGAG | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSFSSTV*DSSSKE Trigger: CTCCTTTGAGCTGCTGTCCCACACCGTGGAAGAGAA...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | GTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTAAAACCTGCTTATGGACGTaGATGTCTGAGGGGTCAGGT | + |
Preference number: 4 (lower is better) Translates to: VVLSHFVYFNKGSPRVIKTCLWT*MSEGSG Trigger: ACCTGACCCCTCAGACATCCACGTCCATAAGCAGGT...TTTAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR CCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTACCTGCTTATGGACGTaGATGTCTGAGGGGTCAGGT | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSTCLWT*MSEGSG Trigger: ACCTGACCCCTCAGACATCCACGTCCATAAGCAGGT...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CCA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATAACTTGTTCACAAACTaGTTCATTGTGTTGCACGTT | + |
Preference number: 4 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHNLFTN*FIVLHV Trigger: AACGTGCAACACAATGAACCAGTTTGTGAACAAGTT...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCTGGCCAGAGTGTAAGTaGGCTCAGCAAACAGCATTG | + |
Preference number: 4 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPWPECK*AQQTAL Trigger: CAATGCTGTTTGCTGAGCTCACTTACACTCTGGCCA...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR TCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTTGGCCAGAGTGTAAGTaGGCTCAGCAAACAGCATTG | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSWPECK*AQQTAL Trigger: CAATGCTGTTTGCTGAGCTCACTTACACTCTGGCCA...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | GTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTAAATTGATGGCACTATGCTaGGCTATCAGGTGTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: VVLSHFVYFNKGSPRVIKLMALC*AIRCSA Trigger: GGCTGAACACCTGATAGCTCAGCATAGTGCCATCAA...TTTAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCAGCTTCACACGGCTGTaGAGCATCTTGATGGCACTA | + |
Preference number: 4 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPSFTRL*SILMAL Trigger: TAGTGCCATCAAGATGCTGCACAGCCGTGTGAAGCT...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR GCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTAGCTTCACACGGCTGTaGAGCATCTTGATGGCACTA | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSSFTRL*SILMAL Trigger: TAGTGCCATCAAGATGCTGCACAGCCGTGTGAAGCT...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCGAAGGGAACCTCTCCTaGTTCAGAGGCCTTGACATA | + |
Preference number: 4 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPEGNLS*FRGLDI Trigger: TATGTCAAGGCCTCTGAAGCAGGAGAGGTTCCCTTC...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR CCA 90 bp | AGGTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTACGCATGCGGATCCAATaGTCTGAGATGTTAAGGATG | + |
Preference number: 4 (lower is better) Translates to: RSSYHILSTSTRGHLESLRMRIQ*SEMLRM Trigger: CATCCTTAACATCTCAGACCATTGGATCCGCATGCG...TAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR TCA 90 bp | GACCACTGTTTCTTGAGATGCTTCCAATTATGGACATTTCGTTTGTTAGACCCCGCGGATCCAATGGTCTaGGATGTTAAGGATGACAAG | + |
Preference number: 4 (lower is better) Translates to: DHCFLRCFQLWTFRLLDPADPMV*DVKDDK Trigger: CTTGTCATCCTTAACATCTCAGACCATTGGATCCGC...GGGGTCTAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR TCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTCAGACTCAAAAACGCTaGCAGGAAGATCTGTGTGCT | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSQTQKR*QEDLCA Trigger: AGCACACAGATCTTCCTGTCAGCGTTTTTGAGTCTG...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR TCA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGGTCGTAGAGGACGTTaGACTTGTTCACAAACTGGT | + |
Preference number: 4 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSGRRGR*TCSQTG Trigger: ACCAGTTTGTGAACAAGTTCAACGTCCTCTACGACC...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR GCA 90 bp | AGGTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTAACAGGAAGATCTGTGTaGTTGGTCATAGGGTTCAAC | + |
Preference number: 4 (lower is better) Translates to: RSSYHILSTSTRGHLESLTGRSV*LVIGFN Trigger: GTTGAACCCTATGACCAAGCACACAGATCTTCCTGT...TAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
3UTR CAA 72 bp | AATCTGGGAGATAGAAGGCCTTGGGACCACTGTTTCTaGAGATGCTTCCAATTATGGACATTTCGTTTGTTA | + |
Preference number: 4 (lower is better) Translates to: NLGDRRPWDHCF*RCFQLWTFRLL Trigger: TAACAAACGAAATGTCCATAATTGGAAGCATCTCAAGAAACAGTGGTCCCAAGGCCTTCTATCTCCCAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS GCA 90 bp | GGAAACACTCCCAGTCACTCCGGAGGCCATCACGCTGGGGACTGCTaGATCCACTTCCATGCCGCTGCTGCCTCCGCTCCCATTCGCCCC | + |
Preference number: 5 (lower is better) Translates to: GNTPSHSGGHHAGDC*IHFHAAAASAPIRP Trigger: GGGGCGAATGGGAGCGGAGGCAGCAGCGGCATGGAAGTGGATGCAGCAGTCCCCAGCGTGATGGCCTCCGGAGTGACTGGGAGTGTTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS GCA 90 bp | GACGGAAACACTCCCAGTCACTCCGGAGGCCATCACGCTGGGGACTaGTGCATCCACTTCCATGCCGCTGCTGCCTCCGCTCCCATTCGC | + |
Preference number: 5 (lower is better) Translates to: DGNTPSHSGGHHAGD*CIHFHAAAASAPIR Trigger: GCGAATGGGAGCGGAGGCAGCAGCGGCATGGAAGTGGATGCAGCAGTCCCCAGCGTGATGGCCTCCGGAGTGACTGGGAGTGTTTCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS GCA 90 bp | AGCTATCAGGTGTTCAGCCACAGTGGAGTTCTCCCCACTGCCTGTTaGTGTCATCCGGGCCACGTGGTCTACACCGATCCGTTCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: SYQVFSHSGVLPTAC*CHPGHVVYTDPFSF Trigger: GAAGCTGAACGGATCGGTGTAGACCACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAGAACTCCACTGTGGCTGAACACCTGATAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 ENSMUST00000132639.2 |
||
CDS CCA 90 bp | TGCTTCCCGATCAGAGCCCCAATCACCTGCATAGGCCGCCCCTCCTaGGAGCGCATGCGGATCCAATGGTCTGAGATGTTAAGGATGACA | + |
Preference number: 5 (lower is better) Translates to: CFPIRAPITCIGRPS*ERMRIQWSEMLRMT Trigger: TGTCATCCTTAACATCTCAGACCATTGGATCCGCATGCGCTCCCAGGAGGGGCGGCCTATGCAGGTGATTGGGGCTCTGATCGGGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS TCA 90 bp | CTGCATAGGCCGCCCCTCCTGGGAGCGCATGCGGATCCAATGGTCTaGGATGTTAAGGATGACAAGGGGATGAAGAGCGACGGAAACACT | + |
Preference number: 5 (lower is better) Translates to: LHRPPLLGAHADPMV*DVKDDKGMKSDGNT Trigger: AGTGTTTCCGTCGCTCTTCATCCCCTTGTCATCCTTAACATCTCAGACCATTGGATCCGCATGCGCTCCCAGGAGGGGCGGCCTATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CAA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATTCGCCGGCCAATGCCTaGTCGGTCGTAGAGGACGTT | + |
Preference number: 5 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHSPANA*SVVEDV Trigger: AACGTCCTCTACGACCGACAAGGCATTGGCCGGCGA...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS TCA 90 bp | CGCATGCGGATCCAATGGTCTGAGATGTTAAGGATGACAAGGGGATaGAGAGCGACGGAAACACTCCCAGTCACTCCGGAGGCCATCACG | + |
Preference number: 5 (lower is better) Translates to: RMRIQWSEMLRMTRG*RATETLPVTPEAIT Trigger: CGTGATGGCCTCCGGAGTGACTGGGAGTGTTTCCGTCGCTCTTCATCCCCTTGTCATCCTTAACATCTCAGACCATTGGATCCGCATGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS TCA 90 bp | AAAATGAGCTTCACACGGCTGTGCAGCATCTTGATGGCACTATGCTaGGCTATCAGGTGTTCAGCCACAGTGGAGTTCTCCCCACTGCCT | + |
Preference number: 5 (lower is better) Translates to: KMSFTRLCSILMALC*AIRCSATVEFSPLP Trigger: AGGCAGTGGGGAGAACTCCACTGTGGCTGAACACCTGATAGCTCAGCATAGTGCCATCAAGATGCTGCACAGCCGTGTGAAGCTCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 ENSMUST00000132639.2 |
||
CDS-3UTR CAA 90 bp | AGGTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTATCTCCCCACTGCCTGTaGCTGTCATCCGGGCCACGT | + |
Preference number: 5 (lower is better) Translates to: RSSYHILSTSTRGHLESLSPHCL*LSSGPR Trigger: ACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAGA...TAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR CAA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATGGAAGATCTGTGTGCTaGGTCATAGGGTTCAACTTC | + |
Preference number: 5 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHGRSVC*VIGFNF Trigger: GAAGTTGAACCCTATGACCAAGCACACAGATCTTCC...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CAA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATAACTGGTTCATTGTGTaGCACGTTTTGGTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHNWFIV*HVLVMV Trigger: CACCATCACCAAAACGTGCAACACAATGAACCAGTT...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CAA 90 bp | AAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTGAGCCCCACACACCATCCCCACGTCATTGCATaGATCATAAAAGTCTGTCTT | + |
Preference number: 5 (lower is better) Translates to: KGMWYSGPWNSCLSPTHHPHVIA*IIKVCL Trigger: AAGACAGACTTTTATGATCAATGCAATGACGTGGGG...ATGGTGTGTGGGGCTCAGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CAA 90 bp | GTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTAAAGGAAGATCTGTGTGCTaGGTCATAGGGTTCAACTTC | + |
Preference number: 5 (lower is better) Translates to: VVLSHFVYFNKGSPRVIKGRSVC*VIGFNF Trigger: GAAGTTGAACCCTATGACCAAGCACACAGATCTTCC...TTTAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR CAA 90 bp | AGGTCGTCCTATCACATTTTGTCTACTTCAACAAGGGGTCACCTCGAGTCATTACCCCACGTCATTGCATaGATCATAAAAGTCTGTCTT | + |
Preference number: 5 (lower is better) Translates to: RSSYHILSTSTRGHLESLPHVIA*IIKVCL Trigger: AAGACAGACTTTTATGATCAATGCAATGACGTGGGG...TAATGACTCGAGGTGACCCCTTGTTGAAGTAGACAAAATGTGATAGGACGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS-3UTR CAA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTAACTGGTTCATTGTGTaGCACGTTTTGGTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSNWFIV*HVLVMV Trigger: CACCATCACCAAAACGTGCAACACAATGAACCAGTT...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CAA 90 bp | TTAATGAGTTTCTCTAAAGGGAATGTGGTACTCAGGTCCATGGAACAGCTGTCTAGAAACTCCAGCTCCTaGAAAACCTGTTTAAACTGC | + |
Preference number: 5 (lower is better) Translates to: LMSFSKGNVVLRSMEQLSRNSSS*KTCLNC Trigger: GCAGTTTAAACAGGTTTTCAAGGAGCTGGAGTTTCT...AGACAGCTGTTCCATGGACCTGAGTACCACATTCCCTTTAGAGAAACTCATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS-3UTR CAA 90 bp | AAACAAGGACTTGAGATAACCACAATTACAAAGATGGAATTCAGCTTCCCTCCCAGAAACTCCAGCTCCTaGAAAACCTGTTTAAACTGC | + |
Preference number: 5 (lower is better) Translates to: KQGLEITTITKMEFSFPPRNSSS*KTCLNC Trigger: GCAGTTTAAACAGGTTTTCAAGGAGCTGGAGTTTCT...GGGAGGGAAGCTGAATTCCATCTTTGTAATTGTGGTTATCTCAAGTCCTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS GCA 72 bp | AGGCCATCACGCTGGGGACTGCTGCATCCACTTCCATaGCGCTGCTGCCTCCGCTCCCATTCGCCCCCGCCG | + |
Preference number: 6 (lower is better) Translates to: RPSRWGLLHPLP*RCCLRSHSPPP Trigger: CGGCGGGGGCGAATGGGAGCGGAGGCAGCAGCGGCATGGAAGTGGATGCAGCAGTCCCCAGCGTGATGGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS GCA 72 bp | CCCAGTCACTCCGGAGGCCATCACGCTGGGGACTGCTaGATCCACTTCCATGCCGCTGCTGCCTCCGCTCCC | + |
Preference number: 6 (lower is better) Translates to: PSHSGGHHAGDC*IHFHAAAASAP Trigger: GGGAGCGGAGGCAGCAGCGGCATGGAAGTGGATGCAGCAGTCCCCAGCGTGATGGCCTCCGGAGTGACTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019638.15 |
||
CDS GCA 72 bp | GTGTTCAGCCACAGTGGAGTTCTCCCCACTGCCTGTTaGTGTCATCCGGGCCACGTGGTCTACACCGATCCG | + |
Preference number: 6 (lower is better) Translates to: VFSHSGVLPTAC*CHPGHVVYTDP Trigger: CGGATCGGTGTAGACCACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAGAACTCCACTGTGGCTGAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 ENSMUST00000132639.2 |
||
CDS CCA 72 bp | TTCTCCCCACTGCCTGTTGCTGTCATCCGGGCCACGTaGTCTACACCGATCCGTTCAGCTTCCTCAGTGGCC | + |
Preference number: 6 (lower is better) Translates to: FSPLPVAVIRAT*STPIRSASSVA Trigger: GGCCACTGAGGAAGCTGAACGGATCGGTGTAGACCACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 ENSMUST00000132639.2 |
||
CDS CAA 90 bp | GAGCTATCAGGTGTTCAGCCACAGTGGAGTTCTCCCCACTGCCTGTaGCTGTCATCCGGGCCACGTGGTCTACACCGATCCGTTCAGCTT | + |
Preference number: 6 (lower is better) Translates to: ELSGVQPQWSSPHCL*LSSGPRGLHRSVQL Trigger: AAGCTGAACGGATCGGTGTAGACCACGTGGCCCGGATGACAGCAACAGGCAGTGGGGAGAACTCCACTGTGGCTGAACACCTGATAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 ENSMUST00000132639.2 |
||
CDS TCA 72 bp | CCGCCCCTCCTGGGAGCGCATGCGGATCCAATGGTCTaGGATGTTAAGGATGACAAGGGGATGAAGAGCGAC | + |
Preference number: 6 (lower is better) Translates to: PPLLGAHADPMV*DVKDDKGMKSD Trigger: GTCGCTCTTCATCCCCTTGTCATCCTTAACATCTCAGACCATTGGATCCGCATGCGCTCCCAGGAGGGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS CCA 72 bp | ATCAGAGCCCCAATCACCTGCATAGGCCGCCCCTCCTaGGAGCGCATGCGGATCCAATGGTCTGAGATGTTA | + |
Preference number: 6 (lower is better) Translates to: IRAPITCIGRPS*ERMRIQWSEML Trigger: TAACATCTCAGACCATTGGATCCGCATGCGCTCCCAGGAGGGGCGGCCTATGCAGGTGATTGGGGCTCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS TCA 72 bp | TTCACACGGCTGTGCAGCATCTTGATGGCACTATGCTaGGCTATCAGGTGTTCAGCCACAGTGGAGTTCTCC | + |
Preference number: 6 (lower is better) Translates to: FTRLCSILMALC*AIRCSATVEFS Trigger: GGAGAACTCCACTGTGGCTGAACACCTGATAGCTCAGCATAGTGCCATCAAGATGCTGCACAGCCGTGTGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 ENSMUST00000132639.2 |
||
CDS GCA 72 bp | TCAAAGGAGTTCATCACTTCGATATTTCGCCCCTCCTaGTTCCCGATCAGAGCCCCAATCACCTGCATAGGC | + |
Preference number: 6 (lower is better) Translates to: SKEFITSIFRPS*FPIRAPITCIG Trigger: GCCTATGCAGGTGATTGGGGCTCTGATCGGGAAGCAGGAGGGGCGAAATATCGAAGTGATGAACTCCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |
||
CDS TCA 72 bp | ATCCAATGGTCTGAGATGTTAAGGATGACAAGGGGATaGAGAGCGACGGAAACACTCCCAGTCACTCCGGAG | + |
Preference number: 6 (lower is better) Translates to: IQWSEMLRMTRG*RATETLPVTPE Trigger: CTCCGGAGTGACTGGGAGTGTTTCCGTCGCTCTTCATCCCCTTGTCATCCTTAACATCTCAGACCATTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019638.15 ENSMUST00000110951.8 |