Pregenerated sensors for COPS4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035297Ensembl transcript IDs: ENSMUST00000045993.15, ENSMUST00000123069.2, ENSMUST00000123492.8, ENSMUST00000146476.8, ENSMUST00000151414.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCAAAGGAGGCTGAGATGTCTAAGGTCATGATGCAAATGCTTTaGGGGGCAGTGAATCAATCTGCACGAAGTGGCAAAGATGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PAKEAEMSKVMMQML*GAVNQSARSGKDAV Trigger: CACTGCATCTTTGCCACTTCGTGCAGATTGATTCACTGCCCCTCAAAGCATTTGCATCATGACCTTAGACATCTCAGCCTCCTTTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR CCA 90 bp | ATTATGTTTAAACGATGCACTTCTTGCTCTAGCATCTTCTTCAAGTaGGATCCAGCAAAGGAGGCTGAGATGTCTAAGGTCATGATGCAA | + |
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Preference number: 1 (lower is better) Translates to: IMFKRCTSCSSIFFK*DPAKEAEMSKVMMQ Trigger: TTGCATCATGACCTTAGACATCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGCATCGTTTAAACATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR-3UTR TCA 90 bp | GGACGCTCGGTTTATGTAAGCCTCGGCCTGGACGGGATCGTCATCCTCCAGGTAGCTCTTCAAAGGAAATaGCCCGAGGCTGGATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GRSVYVSLGLDGIVILQVALQRK*PEAGSS Trigger: AGAAGATCCAGCCTCGGGTCATTTCCTTTGAAGAGC...TACCTGGAGGATGACGATCCCGTCCAGGCCGAGGCTTACATAAACCGAGCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| 3UTR-3UTR TCA 90 bp | CCGAGGCTGGATCTTCTCCAAGGTGAAATGGTAGACCTCCTTGGCTGTGCTGTCTCTGTCCCAGATAACTaGATGGCTTTTTCCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: PRLDLLQGEMVDLLGCAVSVPDN*MAFSRI Trigger: GATTCTGGAAAAAGCCATTCAGTTATCTGGGACAGA...GACAGCACAGCCAAGGAGGTCTACCATTTCACCTTGGAGAAGATCCAGCCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAACCTGCTCTTCAAAGGAAATGACCCGAGGCTGGATCTTCTCCAAGGTGAAGTGAGATCACGAGGCTaGCATTCTCATTCACCATCG | + |
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Preference number: 2 (lower is better) Translates to: SNLLFKGNDPRLDLLQGEVRSRG*HSHSPS Trigger: CGATGGTGAATGAGAATGTCAGCCTCGTGATCTCAC...TTCACCTTGGAGAAGATCCAGCCTCGGGTCATTTCCTTTGAAGAGCAGGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| 3UTR CAA 90 bp | TGTAAGCCTCGGCCTGGACGGGATCGTCATCCTCCAGGTATAGCCTaGCAATCTTCAGGTAAGTCTCCAGCTTATAATCTACGTTGTACT | + |
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Preference number: 2 (lower is better) Translates to: CKPRPGRDRHPPGIA*QSSGKSPAYNLRCT Trigger: AGTACAACGTAGATTATAAGCTGGAGACTTACCTGAAGATTGCAAGGCTATACCTGGAGGATGACGATCCCGTCCAGGCCGAGGCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| 3UTR-3UTR TCA 90 bp | ATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCATCTTTTCTGCAGAGTaGGTTCCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IDLVNKPIHASFRYHLRCIFSAE*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTCTGCAGAAAAGAT...GCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGGCAGTGAATCAATCTaGACGAAGTGGCAAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: TSGLSLPLKEQVFKASELGSESI*TKWQRC Trigger: GCATCTTTGCCACTTCGTGCAGATTGATTCACTGCC...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAAGCATCTTCTTCAAGTaGGATCCAGCAAAGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TSGLSLPLKEQVFKASELSIFFK*DPAKEA Trigger: AGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCT...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGTTAGATGTCTAAGGTCATaGTGCAAATGCTTTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SGLSLPLKEQVFKASELVRCLRS*CKCFEG Trigger: CCCCTCAAAGCATTTGCATCATGACCTTAGACATCT...AACTAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR-3UTR GCA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAAAACGATGCACTTCTTaGTCTAGCATCTTCTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TSGLSLPLKEQVFKASELKRCTS*SSIFFK Trigger: CTTGAAGAAGATGCTAGAGCAAGAAGTGCATCGTTT...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR GCA 72 bp | CATGATGCAAATGCTTTGAGGGGCAGTGAATCAATCTaGACGAAGTGGCAAAGATGCAGTGCGCACAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: HDANALRGSESI*TKWQRCSAHSA Trigger: AGCGCTGTGCGCACTGCATCTTTGCCACTTCGTGCAGATTGATTCACTGCCCCTCAAAGCATTTGCATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR TCA 72 bp | GAGGCTGAGATGTCTAAGGTCATGATGCAAATGCTTTaGGGGGCAGTGAATCAATCTGCACGAAGTGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: EAEMSKVMMQML*GAVNQSARSGK Trigger: TTTGCCACTTCGTGCAGATTGATTCACTGCCCCTCAAAGCATTTGCATCATGACCTTAGACATCTCAGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR GCA 72 bp | AAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATaGTATCTTTTCTGCAGAGTGAGTTCCAGGACAGCC | + |
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Preference number: 3 (lower is better) Translates to: KPIHASFRYHLR*YLFCRVSSRTA Trigger: GGCTGTCCTGGAACTCACTCTGCAGAAAAGATAGCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| 3UTR TCA 72 bp | AGAAATCTGTTAGCAGTTGCCGTGAGATCACGAGGCTaGCATTCTCATTCACCATCGCTTCCACAAAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: RNLLAVAVRSRG*HSHSPSLPQKL Trigger: AAGCTTTTGTGGAAGCGATGGTGAATGAGAATGTCAGCCTCGTGATCTCACGGCAACTGCTAACAGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| 3UTR GCA 72 bp | CTCACGGGAGCTATTATGTTTAAACGATGCACTTCTTaGTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LTGAIMFKRCTS*SSIFFKWDPAK Trigger: CTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGCATCGTTTAAACATAATAGCTCCCGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR GCA 72 bp | GACCCAGATCTCACGGGAGCTATTATGTTTAAACGATaGACTTCTTGCTCTAGCATCTTCTTCAAGTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: DPDLTGAIMFKR*TSCSSIFFKWD Trigger: ATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGCATCGTTTAAACATAATAGCTCCCGTGAGATCTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR-3UTR CAA 90 bp | TCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGTTCATGATGCAAATGCTTaGAGGGGCAGTGAATCAATC | + |
|
Preference number: 3 (lower is better) Translates to: SGLSLPLKEQVFKASELVHDANA*RGSESI Trigger: GATTGATTCACTGCCCCTCAAAGCATTTGCATCATG...AACTAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR TCA 90 bp | GGACGCTCGGTTTATGTAAGCCTCGGCCTGGACGGGATCGTCATCCTCCAGGTAAGCCGCTTGAATTCATaGGCTGGGCCAAATCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GRSVYVSLGLDGIVILQVSRLNS*AGPNPV Trigger: GACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCT...TACCTGGAGGATGACGATCCCGTCCAGGCCGAGGCTTACATAAACCGAGCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| CDS-3UTR TCA 90 bp | GGTGAAATGGTAGACCTCCTTGGCTGTGCTGTCTGGCAGGTTAGGGAGGTGTGTAGCAGGCAGCAGGTCTaGAGAACCATTTGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GEMVDLLGCAVWQVREVCSRQQV*RTICPP Trigger: TGGCGGGCAAATGGTTCTTCAGACCTGCTGCCTGCT...ACACACCTCCCTAACCTGCCAGACAGCACAGCCAAGGAGGTCTACCATTTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| CDS-3UTR GCA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGACGCTTCCATGGCTTGTaGTGTCCACTCCGGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLALASSSSGIQQRRLRRFHGL*CPLRGR Trigger: ACGGCCCCGGAGTGGACAGCACAAGCCATGGAAGCG...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CCA 90 bp | AGCAGTTGCCGTGAGATCACGAGGCTGACATTCTCATTCACCATCGCTTCCACACTTGAATTCATGAGCTaGGCCAAATCCTGTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SSCREITRLTFSFTIASTLEFMS*AKSCRT Trigger: CGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAG...TGTGGAAGCGATGGTGAATGAGAATGTCAGCCTCGTGATCTCACGGCAACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| CDS-3UTR CCA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGACTGCCGATGCTAAGATaGTGCAGTGCAGTGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: ALLALASSSSGIQQRRLRLPMLR*CSAVHA Trigger: AGCATGCACTGCACTGCACCATCTTAGCATCGGCAG...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR TCA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGACCCGCCAGATCTTTATaGGAGCCGCTTGAATTCATG | + |
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Preference number: 4 (lower is better) Translates to: ALLALASSSSGIQQRRLRPARSL*EPLEFM Trigger: CATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGG...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR GCA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGAGTGCAGTGCAGTGCATaGTTTAAGGCCTCTAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ALLALASSSSGIQQRRLRVQCSA*FKASSL Trigger: GAGACTAGAGGCCTTAAAGCATGCACTGCACTGCAC...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR GCA 90 bp | GATGCAAATGCTTTGAGGGGCAGTGAATCAATCTGCACGAAGTGGCAAAGATGCCAGCTCTGTCCAAGATaGTGGAACCATCAGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: DANALRGSESICTKWQRCQLCPR*WNHQLS Trigger: CGACAGCTGATGGTTCCAGCATCTTGGACAGAGCTG...GCATCTTTGCCACTTCGTGCAGATTGATTCACTGCCCCTCAAAGCATTTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTTATTTGGCTCACCGCTCCGTTTATTAGAGTAACCACATGTGGAGAGCTTGGCTGTGCTGTCTaGCAGGTTAGGGAGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TAFIWLTAPFIRVTTCGELGCAV*QVREVC Trigger: ACACACCTCCCTAACCTGCCAGACAGCACAGCCAAG...CTCTCCACATGTGGTTACTCTAATAAACGGAGCGGTGAGCCAAATAAAGGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CCA 90 bp | TGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGATGTCTAAGCTGCTTGTCCCATGTTaGCAGGGCTTCTCGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: CSSIFFKWDPAKEAEMSKLLVPC*QGFSCF Trigger: GAAACACGAGAAGCCCTGCCAACATGGGACAAGCAG...CTTAGACATCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| 3UTR CAA 72 bp | CGGCCTGGACGGGATCGTCATCCTCCAGGTATAGCCTaGCAATCTTCAGGTAAGTCTCCAGCTTATAATCTA | + |
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Preference number: 4 (lower is better) Translates to: RPGRDRHPPGIA*QSSGKSPAYNL Trigger: TAGATTATAAGCTGGAGACTTACCTGAAGATTGCAAGGCTATACCTGGAGGATGACGATCCCGTCCAGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| CDS-3UTR TCA 90 bp | TGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGATGTCTAAGGTGAGATCACGAGGCTaGCATTCTCATTCACCATCG | + |
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Preference number: 4 (lower is better) Translates to: CSSIFFKWDPAKEAEMSKVRSRG*HSHSPS Trigger: CGATGGTGAATGAGAATGTCAGCCTCGTGATCTCAC...CTTAGACATCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR GCA 90 bp | GATGCAAATGCTTTGAGGGGCAGTGAATCAATCTGCACGAAGTGGCAAAGATGCCACCAACACTTGGGCTaGATTTCTCCAGTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: DANALRGSESICTKWQRCHQHLG*ISPVFL Trigger: GAGGAAGACTGGAGAAATGCAGCCCAAGTGTTGGTG...GCATCTTTGCCACTTCGTGCAGATTGATTCACTGCCCCTCAAAGCATTTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CCA 90 bp | TGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGATGTCTAAGCTTGAATTCATGAGCTaGGCCAAATCCTGTCGCACG | + |
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Preference number: 4 (lower is better) Translates to: CSSIFFKWDPAKEAEMSKLEFMS*AKSCRT Trigger: CGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAG...CTTAGACATCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR TCA 90 bp | TTTTTGTCCTGTTTCCAGAGGAATCCCCACCAACACTTGGGCTGCATTTCTCCATTTATGAGAGCCGCTTaGATTCATGAGCTGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FLSCFQRNPHQHLGCISPFMRAA*IHELGQ Trigger: TTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAA...TGGAGAAATGCAGCCCAAGTGTTGGTGGGGATTCCTCTGGAAACAGGACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| CDS-3UTR TCA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGACCTTCCGTTATCATCTaGGATGCTATCTTTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ALLALASSSSGIQQRRLRPSVII*DAIFSA Trigger: GGCAGAAAAGATAGCATCTCAGATGATAACGGAAGG...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR GCA 90 bp | ATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCCAGCTCTGTCCAAGATaGTGGAACCATCAGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: IDLVNKPIHASFRYHLRCQLCPR*WNHQLS Trigger: CGACAGCTGATGGTTCCAGCATCTTGGACAGAGCTG...GCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTTATTTGGCTCACCGCTCCGTTTATTAGAGTAACCACATGTGGAGAGCAAAGTGACTGGATCTaGTTGTCCCATGTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TAFIWLTAPFIRVTTCGEQSDWI*LSHVGR Trigger: CCTGCCAACATGGGACAAGCAGATCCAGTCACTTTG...CTCTCCACATGTGGTTACTCTAATAAACGGAGCGGTGAGCCAAATAAAGGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CCA 90 bp | GATGCAAATGCTTTGAGGGGCAGTGAATCAATCTGCACGAAGTGGCAAAGATGCGCTGTCGTTGCTTTTTaGTGTGGCATCAGCATAGCA | + |
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Preference number: 4 (lower is better) Translates to: DANALRGSESICTKWQRCAVVAF*CGISIA Trigger: TGCTATGCTGATGCCACACCAAAAAGCAACGACAGC...GCATCTTTGCCACTTCGTGCAGATTGATTCACTGCCCCTCAAAGCATTTGCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CCA 90 bp | ATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCATCCCCACCAACACTTaGGCTGCATTTCTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: IDLVNKPIHASFRYHLRCIPTNT*AAFLQS Trigger: AGACTGGAGAAATGCAGCCCAAGTGTTGGTGGGGAT...GCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTTATTTGGCTCACCGCTCCGTTTATTAGAGTAACCACATGTGGAGAGAGCTCATTGTACCTCTaGGCGGCCTCAATGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: TAFIWLTAPFIRVTTCGESSLYL*AASMNF Trigger: GAAATTCATTGAGGCCGCCCAGAGGTACAATGAGCT...CTCTCCACATGTGGTTACTCTAATAAACGGAGCGGTGAGCCAAATAAAGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR GCA 90 bp | TGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGATGTCTAAGGAATCTGACGATATTTaGCCGCCAGATCTTTATGAG | + |
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Preference number: 4 (lower is better) Translates to: CSSIFFKWDPAKEAEMSKESDDI*PPDLYE Trigger: CTCATAAAGATCTGGCGGGCAAATATCGTCAGATTC...CTTAGACATCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CCA 90 bp | AAAATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTCTGCCGATGCTAAGATaGTGCAGTGCAGTGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: KMNYSIDLVNKPIHASFRLPMLR*CSAVHA Trigger: AGCATGCACTGCACTGCACCATCTTAGCATCGGCAG...ACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR CCA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGATATGCAGCTAGTTGCTaGCACCTTTCATCCTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: ALLALASSSSGIQQRRLRYAASC*HLSSLK Trigger: TTTTAAGGATGAAAGGTGCCAGCAACTAGCTGCATA...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR TCA 90 bp | AACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATGCTCTTCAAAGGAAATaGCCCGAGGCTGGATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NYSIDLVNKPIHASFRYHALQRK*PEAGSS Trigger: AGAAGATCCAGCCTCGGGTCATTTCCTTTGAAGAGC...ATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR GCA 90 bp | AAAATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTCACCAACACTTGGGCTaGATTTCTCCAGTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KMNYSIDLVNKPIHASFRHQHLG*ISPVFL Trigger: GAGGAAGACTGGAGAAATGCAGCCCAAGTGTTGGTG...ACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR GCA 90 bp | ATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATGTGCAGTGCAGTGCATaGTTTAAGGCCTCTAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: MNYSIDLVNKPIHASFRYVQCSA*FKASSL Trigger: GAGACTAGAGGCCTTAAAGCATGCACTGCACTGCAC...ATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR CCA 90 bp | GATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCTATGAAATGACCCGAGGCTaGATCTTCTCCAAGGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: DLVNKPIHASFRYHLRCYEMTRG*IFSKVK Trigger: TTTCACCTTGGAGAAGATCCAGCCTCGGGTCATTTC...ATAGCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR CCA 90 bp | ATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCTCTGTCCAAGATGCTaGAACCATCAGCTGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MNYSIDLVNKPIHASFRYLCPRC*NHQLSL Trigger: CAACGACAGCTGATGGTTCCAGCATCTTGGACAGAG...ATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CCA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCACCATCTGCGCTTCCATaGCTTGTGCTGTCCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSPSALP*LVLSTP Trigger: CGGAGTGGACAGCACAAGCCATGGAAGCGCAGATGG...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR GCA 90 bp | AAAATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTCCGATGCTAAGATGGTaGAGTGCAGTGCATGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KMNYSIDLVNKPIHASFRPMLRW*SAVHAL Trigger: TAAAGCATGCACTGCACTGCACCATCTTAGCATCGG...ACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTTTATTTGGCTCACCGCTCCGTTTATTAGAGTAACCACATGTGGAGAGGCTGACAACAAATTATaGTCAATAACAGCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAFIWLTAPFIRVTTCGEADNKL*SITALS Trigger: GGACAGAGCTGTTATTGAGCATAATTTGTTGTCAGC...CTCTCCACATGTGGTTACTCTAATAAACGGAGCGGTGAGCCAAATAAAGGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CCA 90 bp | AAAATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTAGCTCATTGTACCTCTaGGCGGCCTCAATGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMNYSIDLVNKPIHASFRSSLYL*AASMNF Trigger: GAAATTCATTGAGGCCGCCCAGAGGTACAATGAGCT...ACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATGCTGTCGTTGCTTTTTaGTGTGGCATCAGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MNYSIDLVNKPIHASFRYAVVAF*CGISIA Trigger: TGCTATGCTGATGCCACACCAAAAAGCAACGACAGC...ATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CCA 90 bp | GACTACAAAGTGATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGCTCTGTCCAAGATGCTaGAACCATCAGCTGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DYKVITNPKLQVFHFHLKLCPRC*NHQLSL Trigger: CAACGACAGCTGATGGTTCCAGCATCTTGGACAGAG...CTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGATCACTTTGTAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR TCA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAGCCGCTTGAATTCATaGGCTGGGCCAAATCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSSRLNS*AGPNPV Trigger: GACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCT...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR TCA 90 bp | TCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGTTGCTCTTCAAAGGAAATaGCCCGAGGCTGGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLSLPLKEQVFKASELVALQRK*PEAGSS Trigger: AGAAGATCCAGCCTCGGGTCATTTCCTTTGAAGAGC...AACTAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR TCA 90 bp | ATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATATAGCAGCAAATTCTTaGAGCTGGTTCCCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: MNYSIDLVNKPIHASFRYIAANS*SWFPLM Trigger: CATCAGAGGGAACCAGCTTCAAGAATTTGCTGCTAT...ATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTTTATTTGGCTCACCGCTCCGTTTATTAGAGTAACCACATGTGGAGAGCTTCTCATAAATAGATaGCAGATGCTGTCTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAFIWLTAPFIRVTTCGELLINR*QMLSYG Trigger: TCCATAAGACAGCATCTGGCATCTATTTATGAGAAG...CTCTCCACATGTGGTTACTCTAATAAACGGAGCGGTGAGCCAAATAAAGGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR GCA 90 bp | GACTACAAAGTGATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGCCGATGCTAAGATGGTaGAGTGCAGTGCATGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: DYKVITNPKLQVFHFHLKPMLRW*SAVHAL Trigger: TAAAGCATGCACTGCACTGCACCATCTTAGCATCGG...CTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGATCACTTTGTAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR GCA 90 bp | ATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCCATATGCAGCTAGTTaGTGGCACCTTTCATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MNYSIDLVNKPIHASFRYPYAAS*WHLSSL Trigger: TAAGGATGAAAGGTGCCAGCAACTAGCTGCATATGG...ATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR TCA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGCTTTTTCCAGAATCTaGCGATATTTGCCCGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSLPLKEQVFKASELAFSRI*RYLPAR Trigger: TCTGGCGGGCAAATATCGTCAGATTCTGGAAAAAGC...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR GCA 90 bp | ATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCCTTCTCATAAATAGATaGCAGATGCTGTCTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IDLVNKPIHASFRYHLRCLLINR*QMLSYG Trigger: TCCATAAGACAGCATCTGGCATCTATTTATGAGAAG...GCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR GCA 90 bp | GACTACAAAGTGATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGCCATATGCAGCTAGTTaGTGGCACCTTTCATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DYKVITNPKLQVFHFHLKPYAAS*WHLSSL Trigger: TAAGGATGAAAGGTGCCAGCAACTAGCTGCATATGG...CTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGATCACTTTGTAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR GCA 90 bp | GATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCTATGCTGACAACAAATTATaGTCAATAACAGCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLVNKPIHASFRYHLRCYADNKL*SITALS Trigger: GGACAGAGCTGTTATTGAGCATAATTTGTTGTCAGC...ATAGCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGAAATGACCCGAGGCTaGATCTTCTCCAAGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSLPLKEQVFKASELEMTRG*IFSKVK Trigger: TTTCACCTTGGAGAAGATCCAGCCTCGGGTCATTTC...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CCA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAATCCCCACCAACACTTaGGCTGCATTTCTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSIPTNT*AAFLQS Trigger: AGACTGGAGAAATGCAGCCCAAGTGTTGGTGGGGAT...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CCA 90 bp | GATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCTATTATGCAGCTAGTTGCTaGCACCTTTCATCCTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLVNKPIHASFRYHLRCYYAASC*HLSSLK Trigger: TTTTAAGGATGAAAGGTGCCAGCAACTAGCTGCATA...ATAGCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR TCA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCATTTATGAGAGCCGCTTaGATTCATGAGCTGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSFMRAA*IHELGQ Trigger: TTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAA...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR TCA 90 bp | GACTACAAAGTGATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGTCTGTCCCAGATAACTaGATGGCTTTTTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: DYKVITNPKLQVFHFHLKSVPDN*MAFSRI Trigger: GATTCTGGAAAAAGCCATTCAGTTATCTGGGACAGA...CTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGATCACTTTGTAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR TCA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTATACTTGGAAACAAAGTaGCTGGATCTGCTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSLPLKEQVFKASELYLETK*LDLLVP Trigger: TGGGACAAGCAGATCCAGTCACTTTGTTTCCAAGTA...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CCA 90 bp | GACTACAAAGTGATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGTGGAAACAAAGTGACTaGATCTGCTTGTCCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DYKVITNPKLQVFHFHLKWKQSD*ICLSHV Trigger: AACATGGGACAAGCAGATCCAGTCACTTTGTTTCCA...CTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGATCACTTTGTAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR TCA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAATAGCAGCAAATTCTTaGAGCTGGTTCCCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSIAANS*SWFPLM Trigger: CATCAGAGGGAACCAGCTTCAAGAATTTGCTGCTAT...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR TCA 90 bp | GACTACAAAGTGATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGTCTCGTGTTTCAAAATaGACTATTCCATCGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DYKVITNPKLQVFHFHLKSRVSK*TIPSIW Trigger: CCAGATCGATGGAATAGTTCATTTTGAAACACGAGA...CTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGATCACTTTGTAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR GCA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAGATGCTATCTTTTCTaGCTTAGCTGCAGGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSRCYLF*LSCRDL Trigger: GAGATCCCTGCAGCTAAGGCAGAAAAGATAGCATCT...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CCA 90 bp | AACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATGTAACTGTTCATTTGTaGATTCGTTCTGAAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NYSIDLVNKPIHASFRYHVTVHL*IRSEVR Trigger: CCTTACTTCAGAACGAATCCACAAATGAACAGTTAC...ATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGTTGTAACTGTTCATTTGTaGATTCGTTCTGAAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLSLPLKEQVFKASELVVTVHL*IRSEVR Trigger: CCTTACTTCAGAACGAATCCACAAATGAACAGTTAC...AACTAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CCA 90 bp | TCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGTTACTATTCCATCGATCTaGTCAATAAACCCATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SGLSLPLKEQVFKASELVTIPSI*SINPFM Trigger: CATGAATGGGTTTATTGACCAGATCGATGGAATAGT...AACTAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS TCA 90 bp | AGGTCTGAAGAACCATTTGCCCGCCAGATCTTTATGAGAGCCGCTTaGATTCATGAGCTGGGCCAAATCCTGTCGCACGGCAGCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSEEPFARQIFMRAA*IHELGQILSHGSRH Trigger: ATGGCGGCTGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGGCAAATGGTTCTTCAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
||
| CDS TCA 90 bp | CAGCAGGCAGCAGGTCTGAAGAACCATTTGCCCGCCAGATCTTTATaGGAGCCGCTTGAATTCATGAGCTGGGCCAAATCCTGTCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: QQAAGLKNHLPARSL*EPLEFMSWAKSCRT Trigger: CGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGGCAAATGGTTCTTCAGACCTGCTGCCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
||
| CDS TCA 90 bp | CAGAATCTGACGATATTTGCCCGCCAGATCTTTATGAGAGCCGCTTaGATTCATGAGCTGGGCCAAATCCTGTCGCACGGCAGCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QNLTIFARQIFMRAA*IHELGQILSHGSRH Trigger: ATGGCGGCTGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGGCAAATATCGTCAGATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS TCA 90 bp | GCCATCTGCGCTTCCATGGCTTGTGCTGTCCACTCCGGGGCCGTCTaGCTAATTTTCTCCAGGAGGTTGTTTACTTGGAAACAAAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AICASMACAVHSGAV*LIFSRRLFTWKQSD Trigger: GTCACTTTGTTTCCAAGTAAACAACCTCCTGGAGAAAATTAGTCAGACGGCCCCGGAGTGGACAGCACAAGCCATGGAAGCGCAGATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CAA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGACCTCCAGGTATAGCCTaGCAATCTTCAGGTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLALASSSSGIQQRRLRPPGIA*QSSGKS Trigger: AGACTTACCTGAAGATTGCAAGGCTATACCTGGAGG...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CAA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCACTGCGCTTCCATGGCTaGTGCTGTCCACTCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSLRFHG*CCPLRG Trigger: GCCCCGGAGTGGACAGCACAAGCCATGGAAGCGCAG...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS TCA 90 bp | CGTCTGACTAATTTTCTCCAGGAGGTTGTTTACTTGGAAACAAAGTaGCTGGATCTGCTTGTCCCATGTTGGCAGGGCTTCTCGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLTNFLQEVVYLETK*LDLLVPCWQGFSCF Trigger: GAAACACGAGAAGCCCTGCCAACATGGGACAAGCAGATCCAGTCACTTTGTTTCCAAGTAAACAACCTCCTGGAGAAAATTAGTCAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS GCA 90 bp | ATTCTGTCTAGGTACATCTTCTCTAGGATCCCATATGCAGCTAGTTaGTGGCACCTTTCATCCTTAAAAAGAGTAGCCAGCATCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSRYIFSRIPYAAS*WHLSSLKRVASIRE Trigger: CTCTCGGATGCTGGCTACTCTTTTTAAGGATGAAAGGTGCCAGCAACTAGCTGCATATGGGATCCTAGAGAAGATGTACCTAGACAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000151414.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTAATCCCCACCAACACTaGGGCTGCATTTCTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KMNYSIDLVNKPIHASFRNPHQH*GCISPV Trigger: GACTGGAGAAATGCAGCCCAAGTGTTGGTGGGGATT...ACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTTTATTTGGCTCACCGCTCCGTTTATTAGAGTAACCACATGTGGAGAGCATAGCAGCAAATTCTaGAAGCTGGTTCCCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAFIWLTAPFIRVTTCGEHSSKF*KLVPSD Trigger: ATCAGAGGGAACCAGCTTCAAGAATTTGCTGCTATG...CTCTCCACATGTGGTTACTCTAATAAACGGAGCGGTGAGCCAAATAAAGGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS TCA 90 bp | CTATTGTCTTGTAAGAGAGCTCATTGTACCTCTGGGCGGCCTCAATaGATTTCCTTCTGTAATCAAGGACACGCGCATAGCAAACCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSCKRAHCTSGRPQ*ISFCNQGHAHSKPY Trigger: ATAAGGTTTGCTATGCGCGTGTCCTTGATTACAGAAGGAAATTCATTGAGGCCGCCCAGAGGTACAATGAGCTCTCTTACAAGACAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000146476.8 ENSMUST00000151414.8 |
||
| CDS-3UTR CAA 90 bp | GCACTTCTTGCTCTAGCATCTTCTTCAAGTGGGATCCAGCAAAGGAGGCTGAGATCTGTAACTGTTCATTaGTGGATTCGTTCTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ALLALASSSSGIQQRRLRSVTVH*WIRSEV Trigger: TACTTCAGAACGAATCCACAAATGAACAGTTACAGA...TCTCAGCCTCCTTTGCTGGATCCCACTTGAAGAAGATGCTAGAGCAAGAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
||
| CDS-3UTR CAA 90 bp | TATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGCATAGCAGCAAATTCTaGAAGCTGGTTCCCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YSIDLVNKPIHASFRYHLHSSKF*KLVPSD Trigger: ATCAGAGGGAACCAGCTTCAAGAATTTGCTGCTATG...CAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTAACCATCAGCTGTCGTaGCTTTTTGGTGTGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KMNYSIDLVNKPIHASFRNHQLS*LFGVAS Trigger: TGATGCCACACCAAAAAGCAACGACAGCTGATGGTT...ACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTATCTGCTTGTCCCATGTaGGCAGGGCTTCTCGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSGLSLPLKEQVFKASELSACPM*AGLLVF Trigger: AAACACGAGAAGCCCTGCCAACATGGGACAAGCAGA...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CAA 90 bp | ATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAATCCCCACCAACACTaGGGCTGCATTTCTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: ITNPKLQVFHFHLKNKFSNPHQH*GCISPV Trigger: GACTGGAGAAATGCAGCCCAAGTGTTGGTGGGGATT...TGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CAA 90 bp | ACTTCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAAACCATCAGCTGTCGTaGCTTTTTGGTGTGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: TSGLSLPLKEQVFKASELNHQLS*LFGVAS Trigger: TGATGCCACACCAAAAAGCAACGACAGCTGATGGTT...TAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CAA 90 bp | ATGAACTATTCCATCGATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATTACGTTGTACTGTTTTaGTCCTGTTTCCAGAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: MNYSIDLVNKPIHASFRYYVVLF*SCFQRN Trigger: ATTCCTCTGGAAACAGGACAAAAACAGTACAACGTA...ATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATCGATGGAATAGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR CAA 90 bp | GATCTGGTCAATAAACCCATTCATGCGTCCTTCCGTTATCATCTGAGATGCTATTCTGTAACTGTTCATTaGTGGATTCGTTCTGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: DLVNKPIHASFRYHLRCYSVTVH*WIRSEV Trigger: TACTTCAGAACGAATCCACAAATGAACAGTTACAGA...ATAGCATCTCAGATGATAACGGAAGGACGCATGAATGGGTTTATTGACCAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123492.8 |
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| CDS-3UTR CAA 90 bp | GACTACAAAGTGATCACAAATCCCAAACTTCAGGTCTTTCACTTCCACTTAAAGTACGTTGTACTGTTTTaGTCCTGTTTCCAGAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: DYKVITNPKLQVFHFHLKYVVLF*SCFQRN Trigger: ATTCCTCTGGAAACAGGACAAAAACAGTACAACGTA...CTTTAAGTGGAAGTGAAAGACCTGAAGTTTGGGATTTGTGATCACTTTGTAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS-3UTR CAA 90 bp | TCAGGTCTTTCACTTCCACTTAAAGAACAAGTTTTCAAAGCGTCTGAGTTAGTTATTTTCTCCAGGAGGTaGTTTACTTGGAAACAAAGT | + |
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Preference number: 5 (lower is better) Translates to: SGLSLPLKEQVFKASELVIFSRR*FTWKQS Trigger: ACTTTGTTTCCAAGTAAACAACCTCCTGGAGAAAAT...AACTAACTCAGACGCTTTGAAAACTTGTTCTTTAAGTGGAAGTGAAAGACCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS TCA 72 bp | TGCCCGCCAGATCTTTATGAGAGCCGCTTGAATTCATaGGCTGGGCCAAATCCTGTCGCACGGCAGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: CPPDLYESRLNS*AGPNPVARQPP Trigger: TGGCGGCTGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045993.15 ENSMUST00000123069.2 |
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| CDS CCA 72 bp | GCATCCGAGAGCGCTGCTGTCCTGCCGATGCTAAGATaGTGCAGTGCAGTGCATGCTTTAAGGCCTCTAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASESAAVLPMLR*CSAVHALRPLV Trigger: GACTAGAGGCCTTAAAGCATGCACTGCACTGCACCATCTTAGCATCGGCAGGACAGCAGCGCTCTCGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000146476.8 ENSMUST00000151414.8 |
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| CDS GCA 72 bp | TCCGAGAGCGCTGCTGTCCTGCCGATGCTAAGATGGTaGAGTGCAGTGCATGCTTTAAGGCCTCTAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SESAAVLPMLRW*SAVHALRPLVS Trigger: AGAGACTAGAGGCCTTAAAGCATGCACTGCACTGCACCATCTTAGCATCGGCAGGACAGCAGCGCTCTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000146476.8 ENSMUST00000151414.8 |
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| CDS TCA 72 bp | GAACCATTTGCCCGCCAGATCTTTATGAGAGCCGCTTaGATTCATGAGCTGGGCCAAATCCTGTCGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: EPFARQIFMRAA*IHELGQILSHG Trigger: GCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGGCAAATGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| CDS TCA 72 bp | ACGATATTTGCCCGCCAGATCTTTATGAGAGCCGCTTaGATTCATGAGCTGGGCCAAATCCTGTCGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: TIFARQIFMRAA*IHELGQILSHG Trigger: GCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGGCAAATATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS TCA 72 bp | GCTTCCATGGCTTGTGCTGTCCACTCCGGGGCCGTCTaGCTAATTTTCTCCAGGAGGTTGTTTACTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: ASMACAVHSGAV*LIFSRRLFTWK Trigger: TTTCCAAGTAAACAACCTCCTGGAGAAAATTAGTCAGACGGCCCCGGAGTGGACAGCACAAGCCATGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS TCA 72 bp | GCAGGTCTGAAGAACCATTTGCCCGCCAGATCTTTATaGGAGCCGCTTGAATTCATGAGCTGGGCCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: AGLKNHLPARSL*EPLEFMSWAKS Trigger: GGATTTGGCCCAGCTCATGAATTCAAGCGGCTCTCATAAAGATCTGGCGGGCAAATGGTTCTTCAGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123069.2 |
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| CDS GCA 72 bp | TGTCCTGCCGATGCTAAGATGGTGCAGTGCAGTGCATaGTTTAAGGCCTCTAGTCTCTCACTTTCATGGACT | + |
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Preference number: 6 (lower is better) Translates to: CPADAKMVQCSA*FKASSLSLSWT Trigger: AGTCCATGAAAGTGAGAGACTAGAGGCCTTAAAGCATGCACTGCACTGCACCATCTTAGCATCGGCAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000146476.8 ENSMUST00000151414.8 |
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| CDS TCA 72 bp | TGTAAGAGAGCTCATTGTACCTCTGGGCGGCCTCAATaGATTTCCTTCTGTAATCAAGGACACGCGCATAGC | + |
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Preference number: 6 (lower is better) Translates to: CKRAHCTSGRPQ*ISFCNQGHAHS Trigger: GCTATGCGCGTGTCCTTGATTACAGAAGGAAATTCATTGAGGCCGCCCAGAGGTACAATGAGCTCTCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000146476.8 ENSMUST00000151414.8 |
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| CDS GCA 72 bp | AGCTCTGTCCAAGATGCTGGAACCATCAGCTGTCGTTaGTTTTTGGTGTGGCATCAGCATAGCAGCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: SSVQDAGTISCR*FLVWHQHSSKF Trigger: GAATTTGCTGCTATGCTGATGCCACACCAAAAAGCAACGACAGCTGATGGTTCCAGCATCTTGGACAGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 |
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| CDS TCA 72 bp | AATTTTCTCCAGGAGGTTGTTTACTTGGAAACAAAGTaGCTGGATCTGCTTGTCCCATGTTGGCAGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: NFLQEVVYLETK*LDLLVPCWQGF Trigger: GAAGCCCTGCCAACATGGGACAAGCAGATCCAGTCACTTTGTTTCCAAGTAAACAACCTCCTGGAGAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045993.15 |
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| CDS GCA 72 bp | AGGTACATCTTCTCTAGGATCCCATATGCAGCTAGTTaGTGGCACCTTTCATCCTTAAAAAGAGTAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RYIFSRIPYAAS*WHLSSLKRVAS Trigger: GCTGGCTACTCTTTTTAAGGATGAAAGGTGCCAGCAACTAGCTGCATATGGGATCCTAGAGAAGATGTACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000151414.8 |
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| CDS CAA 90 bp | GGACACGCGCATAGCAAACCTTATAGTGTATCTGTAACTGTTCATTaGTGGATTCGTTCTGAAGTAAGGACGCTCGGTTTATGTAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GHAHSKPYSVSVTVH*WIRSEVRTLGLCKP Trigger: AGGCTTACATAAACCGAGCGTCCTTACTTCAGAACGAATCCACAAATGAACAGTTACAGATACACTATAAGGTTTGCTATGCGCGTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045993.15 ENSMUST00000123492.8 ENSMUST00000146476.8 ENSMUST00000151414.8 |
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