Pregenerated sensors for COPS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027206Ensembl transcript IDs: ENSMUST00000028635.6, ENSMUST00000110462.8, ENSMUST00000110463.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CATCCCTTTCAGGACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGACATCTCTGCACTGTTaGCTTAAGCATGTCCGCAAA | + |
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Preference number: 2 (lower is better) Translates to: HPFQDTPTHWSFVFPVLKTSLHC*LKHVRK Trigger: TTTGCGGACATGCTTAAGGCAACAGTGCAGAGATGT...CTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTCCTGAAAGGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR CAA 90 bp | TGTAATTCTCCAAGAGCAAACCCAAGAGGCTTCGGGCAATGGTTGTaGCTGGCATTAGAAAATAACCTTTCAGCATGGTCACTATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CNSPRANPRGFGQWL*LALENNLSAWSLCR Trigger: CCTGCATAGTGACCATGCTGAAAGGTTATTTTCTAATGCCAGCAACAACCATTGCCCGAAGCCTCTTGGGTTTGCTCTTGGAGAATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110463.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAATTTCTGCAGGTACAACATGTTTAAATTTAACCAACAGTAGCGTGTCACAAGGGTCACATCTCTaGACTGTTGCCTTAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: ERISAGTTCLNLTNSSVSQGSHL*TVALSM Trigger: CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTG...TGACACGCTACTGTTGGTTAAATTTAAACATGTTGTACCTGCAGAAATTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGATCATGTCGCCCATGACAAATTACTATGGTGTTGTATGTTTAGGGCAAGATCACAAAAGCACTTCTaGCATAACTCCATCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SDHVAHDKLLWCCMFRARSQKHF*HNSIPF Trigger: GAAAGGGATGGAGTTATGGCAGAAGTGCTTTTGTGA...TCTTGCCCTAAACATACAACACCATAGTAATTTGTCATGGGCGACATGATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGCGTGTTCAAAAGGGTATaGATTTCAAGTTATTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LAARTEIDGHSFGELTFCVFKRV*ISSYCR Trigger: CCTGCAATAACTTGAAATTCATACCCTTTTGAACAC...GCAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTATTGCAGGTTATTTGTaGGAGAATTTCTGCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: FTSCKNRNRRTQFWRIDIIAGYL*ENFCRY Trigger: GTACCTGCAGAAATTCTCTCACAAATAACCTGCAAT...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGCCATGACAAATTACTATaGTGTTGTATGTTTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LAARTEIDGHSFGELTFCHDKLL*CCMFRA Trigger: TGCCCTAAACATACAACACCATAGTAATTTGTCATG...GCAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTTTAAAGCTGTTTTCTTaGGATAAATGCAGCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: MFRARCQHSINPMVFWFSLKLFS*DKCSSK Trigger: TTTGCTGCTGCATTTATCCCAAGAAAACAGCTTTAA...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR GCA 72 bp | GAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTaGACTGTTGCCTTAAGCATGTCCGCAAAGCTCGGT | + |
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Preference number: 3 (lower is better) Translates to: ELCLSSPQGSHL*TVALSMSAKLG Trigger: ACCGAGCTTTGCGGACATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR-3UTR CAA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTCAACCCACTGGAGCTTaGTCTTTCCAGTCCTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: MFRARCQHSINPMVFWFSQPTGA*SFQSSR Trigger: CCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTG...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR CCA 72 bp | AATTCTCCAAGAGCAAACCCAAGAGGCTTCGGGCAATaGTTGTTGCTGGCATTAGAAAATAACCTTTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: NSPRANPRGFGQ*LLLALENNLSA Trigger: TGCTGAAAGGTTATTTTCTAATGCCAGCAACAACCATTGCCCGAAGCCTCTTGGGTTTGCTCTTGGAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110463.8 |
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| 3UTR CCA 72 bp | CTTCTCTCTGATCATGTCGCCCATGACAAATTACTATaGTGTTGTATGTTTAGGGCAAGATGTCAACACAGC | + |
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Preference number: 3 (lower is better) Translates to: LLSDHVAHDKLL*CCMFRARCQHS Trigger: GCTGTGTTGACATCTTGCCCTAAACATACAACACCATAGTAATTTGTCATGGGCGACATGATCAGAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR TCA 72 bp | ACAAATACATCCAAAACTCAATACATTCAAATGGGCTaGGTTCTGCCACCATCGAAGGCCATAGTTCATTCC | + |
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Preference number: 3 (lower is better) Translates to: TNTSKTQYIQMG*VLPPSKAIVHS Trigger: GGAATGAACTATGGCCTTCGATGGTGGCAGAACTCAGCCCATTTGAATGTATTGAGTTTTGGATGTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110463.8 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAATTTCTGCAGGTACAACATGTTTAAATTTAACCAACAGTAGCGTGTCAAAATCCCATGGTGTTTaGGTTTTCTTCTGGAGATTA | + |
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Preference number: 3 (lower is better) Translates to: ERISAGTTCLNLTNSSVSKSHGV*VFFWRL Trigger: TAATCTCCAGAAGAAAACCAAAACACCATGGGATTT...TGACACGCTACTGTTGGTTAAATTTAAACATGTTGTACCTGCAGAAATTCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR-3UTR CAA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTAAATCCCATGGTGTTTaGGTTTTCTTCTGGAGATTA | + |
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Preference number: 3 (lower is better) Translates to: FTSCKNRNRRTQFWRIDIKSHGV*VFFWRL Trigger: TAATCTCCAGAAGAAAACCAAAACACCATGGGATTT...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR TCA 72 bp | TTCATTCCTAACTATTCTGCCACTGCACAAAATACTTaGAAATTATTTGGGGATTGCTTTCAAAGCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: FIPNYSATAQNT*KLFGDCFQSQM Trigger: CATCTGGCTTTGAAAGCAATCCCCAAATAATTTTCAAGTATTTTGTGCAGTGGCAGAATAGTTAGGAATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110463.8 |
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| 3UTR CAA 72 bp | TCCATCCCTTTCAGGACACACCAACCCACTGGAGCTTaGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SIPFRTHQPTGA*SFQSSRVTSLH Trigger: GTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTCCTGAAAGGGATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | CATCCCTTTCAGGACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGCCCATGATTAGTGGGTaGGGGATGGCAGACTTGATG | + |
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Preference number: 4 (lower is better) Translates to: HPFQDTPTHWSFVFPVLKPMISG*GMADLM Trigger: CATCAAGTCTGCCATCCCTCACCCACTAATCATGGG...CTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTCCTGAAAGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTCCCATGATTAGTGGGTaGGGGATGGCAGACTTGATG | + |
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Preference number: 4 (lower is better) Translates to: TGALSFQSSRVTSLHCCLPMISG*GMADLM Trigger: CATCAAGTCTGCCATCCCTCACCCACTAATCATGGG...AAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | CTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGTCCGCACCTCATCATCGCACATaGAATCATCCTCCATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSSPQGSHLCTVALSMSAPHHRT*NHPPCQ Trigger: CTGACATGGAGGATGATTTCATGTGCGATGATGAGG...TGCGGACATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | CCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTCTGTTTTAGCGCTTTaGATCCCCATTCTCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PTHWSFVFPVLKGHISALSVLAL*IPILPS Trigger: AGAAGGGAGAATGGGGATTCAAAGCGCTAAAACAGA...CAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR GCA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTTTATCCAGTATGCACTaGACCAGCAAGCTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: DTPTHWSFVFPVLKGHISLSSMH*TSKLST Trigger: TGTGGAGAGCTTGCTGGTGCAGTGCATACTGGATAA...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTCCTCATCATCGCACATaGAATCATCCTCCATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TGALSFQSSRVTSLHCCLPHHRT*NHPPCQ Trigger: CTGACATGGAGGATGATTTCATGTGCGATGATGAGG...AAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTCAGAATAGTTCCTGGTaGCTGCACTCCGAATATAGG | + |
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Preference number: 4 (lower is better) Translates to: TGALSFQSSRVTSLHCCLQNSSW*LHSEYR Trigger: CCTATATTCGGAGTGCAGTCACCAGGAACTATTCTG...AAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | CCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGCATTTTTATACGGCTTaGCCTCTTGTGAGTCAAACG | + |
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Preference number: 4 (lower is better) Translates to: PTHWSFVFPVLKGHISALHFYTA*PLVSQT Trigger: CGTTTGACTCACAAGAGGCCAAGCCGTATAAAAATG...CAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGGTTCAAGGAGCTGGTTaGCTTGATCAATTCGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LCLSSPQGSHLCTVALSMVQGAG*LDQFGH Trigger: ATGGCCGAATTGATCAAGTCAACCAGCTCCTTGAAC...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | CATCCCTTTCAGGACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGAGCTCCAAAACCTTTTaGAAGCTGCTTAATGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HPFQDTPTHWSFVFPVLKSSKTF*KLLNAA Trigger: AGCAGCATTAAGCAGCTTCCAAAAGGTTTTGGAGCT...CTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTCCTGAAAGGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTAGCTCCAAAACCTTTTaGAAGCTGCTTAATGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DTPTHWSFVFPVLKGHISSSKTF*KLLNAA Trigger: AGCAGCATTAAGCAGCTTCCAAAAGGTTTTGGAGCT...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTCATTTTTATACGGCTTaGCCTCTTGTGAGTCAAACG | + |
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Preference number: 4 (lower is better) Translates to: DTPTHWSFVFPVLKGHISHFYTA*PLVSQT Trigger: CGTTTGACTCACAAGAGGCCAAGCCGTATAAAAATG...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTTCGTCTTGGGCTTCCTaGTTCATCATAATTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: DTPTHWSFVFPVLKGHISSSWAS*FIIILE Trigger: TTCAAGAATTATGATGAATCAGGAAGCCCAAGACGA...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR GCA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGTCACCTTCTCTCAAGTaGATCTTACCACCGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LCLSSPQGSHLCTVALSMSPSLK*ILPPHS Trigger: AGAATGCGGTGGTAAGATGCACTTGAGAGAAGGTGA...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | CATCCCTTTCAGGACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGTTTCCAAATCCACATTaGGCTCAGAGTTACTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HPFQDTPTHWSFVFPVLKFPNPH*AQSYCL Trigger: AAGACAGTAACTCTGAGCCCAATGTGGATTTGGAAA...CTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTCCTGAAAGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | CTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGTCCGCAGAGAATTTAGTTGGTTaGTCCATTTATCTAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSSPQGSHLCTVALSMSAENLVG*SIYLAQ Trigger: CTGCGCTAGATAAATGGACCAACCAACTAAATTCTC...TGCGGACATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| 3UTR CAA 72 bp | TCTCCAAGAGCAAACCCAAGAGGCTTCGGGCAATGGTaGTTGCTGGCATTAGAAAATAACCTTTCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: SPRANPRGFGQW*LLALENNLSAW Trigger: CCATGCTGAAAGGTTATTTTCTAATGCCAGCAACAACCATTGCCCGAAGCCTCTTGGGTTTGCTCTTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110463.8 |
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| CDS-3UTR GCA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGATAGTTCCTGGTGACTaGACTCCGAATATAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LCLSSPQGSHLCTVALSMIVPGD*TPNIGQ Trigger: TTGACCTATATTCGGAGTGCAGTCACCAGGAACTAT...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | GCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATTCGTCTTGGGCTTCCTaGTTCATCATAATTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ALSFQSSRVTSLHCCLKHSSWAS*FIIILE Trigger: TTCAAGAATTATGATGAATCAGGAAGCCCAAGACGA...ATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTTTCAGAGAATTTAGTTaGTTGGTCCATTTATCTAGC | + |
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Preference number: 4 (lower is better) Translates to: DTPTHWSFVFPVLKGHISFREFS*LVHLSS Trigger: GCTAGATAAATGGACCAACCAACTAAATTCTCTGAA...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | CTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGTCCGCATTCAGAGAATTTAGTTaGTTGGTCCATTTATCTAGC | + |
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Preference number: 4 (lower is better) Translates to: LSSPQGSHLCTVALSMSAFREFS*LVHLSS Trigger: GCTAGATAAATGGACCAACCAACTAAATTCTCTGAA...TGCGGACATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGCCCTCATCATCGCACATaGAATCATCCTCCATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LAARTEIDGHSFGELTFCPHHRT*NHPPCQ Trigger: CTGACATGGAGGATGATTTCATGTGCGATGATGAGG...GCAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | TCTGATCATGTCGCCCATGACAAATTACTATGGTGTTGTATGTTTAGGGCAAGACAGAATAGTTCCTGGTaGCTGCACTCCGAATATAGG | + |
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Preference number: 4 (lower is better) Translates to: SDHVAHDKLLWCCMFRARQNSSW*LHSEYR Trigger: CCTATATTCGGAGTGCAGTCACCAGGAACTATTCTG...TCTTGCCCTAAACATACAACACCATAGTAATTTGTCATGGGCGACATGATCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGCGTTCAAGGAGCTGGTTaGCTTGATCAATTCGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LAARTEIDGHSFGELTFCVQGAG*LDQFGH Trigger: ATGGCCGAATTGATCAAGTCAACCAGCTCCTTGAAC...GCAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | GCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATAATATTTTAAACAAGTaGTTCGTCTTGGGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ALSFQSSRVTSLHCCLKHNILNK*FVLGFL Trigger: CAGGAAGCCCAAGACGAACCACTTGTTTAAAATATT...ATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGAATATTTTAAACAAGTaGTTCGTCTTGGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLSSPQGSHLCTVALSMNILNK*FVLGFL Trigger: CAGGAAGCCCAAGACGAACCACTTGTTTAAAATATT...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTGTTCAAGGAGCTGGTTaGCTTGATCAATTCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MFRARCQHSINPMVFWFSVQGAG*LDQFGH Trigger: ATGGCCGAATTGATCAAGTCAACCAGCTCCTTGAAC...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATCATGTCGCCCATGACAAATTACTATGGTGTTGTATGTTTAGGGCAAGATCACCTTCTCTCAAGTaGATCTTACCACCGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDHVAHDKLLWCCMFRARSPSLK*ILPPHS Trigger: AGAATGCGGTGGTAAGATGCACTTGAGAGAAGGTGA...TCTTGCCCTAAACATACAACACCATAGTAATTTGTCATGGGCGACATGATCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTTTATCCAGTATGCACTaGACCAGCAAGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MFRARCQHSINPMVFWFSLSSMH*TSKLST Trigger: TGTGGAGAGCTTGCTGGTGCAGTGCATACTGGATAA...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTGAGGGATGGCAGACTTaGTGTGAAGTGATTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTSCKNRNRRTQFWRIDIEGWQT*CEVIAH Trigger: ATGAGCAATCACTTCACATCAAGTCTGCCATCCCTC...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGAATTTCTGCAGGTACAACATGTTTAAATTTAACCAACAGTAGCGTGTCAGAGGGATGGCAGACTTaGTGTGAAGTGATTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERISAGTTCLNLTNSSVSEGWQT*CEVIAH Trigger: ATGAGCAATCACTTCACATCAAGTCTGCCATCCCTC...TGACACGCTACTGTTGGTTAAATTTAAACATGTTGTACCTGCAGAAATTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTTCACCTTCTCTCAAGTaGATCTTACCACCGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: MFRARCQHSINPMVFWFSSPSLK*ILPPHS Trigger: AGAATGCGGTGGTAAGATGCACTTGAGAGAAGGTGA...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGAATTTCTGCAGGTACAACATGTTTAAATTTAACCAACAGTAGCGTGTCATTATCCAGTATGCACTaGACCAGCAAGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ERISAGTTCLNLTNSSVSLSSMH*TSKLST Trigger: TGTGGAGAGCTTGCTGGTGCAGTGCATACTGGATAA...TGACACGCTACTGTTGGTTAAATTTAAACATGTTGTACCTGCAGAAATTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTCTGTTTTAGCGCTTTaGATCCCCATTCTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTSCKNRNRRTQFWRIDISVLAL*IPILPS Trigger: AGAAGGGAGAATGGGGATTCAAAGCGCTAAAACAGA...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGCATTTTTATACGGCTTaGCCTCTTGTGAGTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: TSCKNRNRRTQFWRIDILHFYTA*PLVSQT Trigger: CGTTTGACTCACAAGAGGCCAAGCCGTATAAAAATG...CAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATCATGTCGCCCATGACAAATTACTATGGTGTTGTATGTTTAGGGCAAGAGAGAATTTAGTTGGTTaGTCCATTTATCTAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDHVAHDKLLWCCMFRARENLVG*SIYLAQ Trigger: CTGCGCTAGATAAATGGACCAACCAACTAAATTCTC...TCTTGCCCTAAACATACAACACCATAGTAATTTGTCATGGGCGACATGATCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGAGACTTGATGTGAAGTaGTTGCTCATAGAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSCKNRNRRTQFWRIDILRLDVK*LLIECF Trigger: AAAGCACTCTATGAGCAATCACTTCACATCAAGTCT...CAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGTCGTCTTGGGCTTCCTaGTTCATCATAATTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSCKNRNRRTQFWRIDILSSWAS*FIIILE Trigger: TTCAAGAATTATGATGAATCAGGAAGCCCAAGACGA...CAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR GCA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTATAGTTCCTGGTGACTaGACTCCGAATATAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTSCKNRNRRTQFWRIDIIVPGD*TPNIGQ Trigger: TTGACCTATATTCGGAGTGCAGTCACCAGGAACTAT...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTTTTCCAAATCCACATTaGGCTCAGAGTTACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MFRARCQHSINPMVFWFSFPNPH*AQSYCL Trigger: AAGACAGTAACTCTGAGCCCAATGTGGATTTGGAAA...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTGAGAATTTAGTTGGTTaGTCCATTTATCTAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MFRARCQHSINPMVFWFSENLVG*SIYLAQ Trigger: CTGCGCTAGATAAATGGACCAACCAACTAAATTCTC...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTAGACTTGATGTGAAGTaGTTGCTCATAGAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTSCKNRNRRTQFWRIDIRLDVK*LLIECF Trigger: AAAGCACTCTATGAGCAATCACTTCACATCAAGTCT...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGAATTTCTGCAGGTACAACATGTTTAAATTTAACCAACAGTAGCGTGTCATTTCCAAATCCACATTaGGCTCAGAGTTACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERISAGTTCLNLTNSSVSFPNPH*AQSYCL Trigger: AAGACAGTAACTCTGAGCCCAATGTGGATTTGGAAA...TGACACGCTACTGTTGGTTAAATTTAAACATGTTGTACCTGCAGAAATTCTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGAATTTCTGCAGGTACAACATGTTTAAATTTAACCAACAGTAGCGTGTCAAATATTTTAAACAAGTaGTTCGTCTTGGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERISAGTTCLNLTNSSVSNILNK*FVLGFL Trigger: CAGGAAGCCCAAGACGAACCACTTGTTTAAAATATT...TGACACGCTACTGTTGGTTAAATTTAAACATGTTGTACCTGCAGAAATTCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGAATTTCTGCAGGTACAACATGTTTAAATTTAACCAACAGTAGCGTGTCATTCAGAGAATTTAGTTaGTTGGTCCATTTATCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERISAGTTCLNLTNSSVSFREFS*LVHLSS Trigger: GCTAGATAAATGGACCAACCAACTAAATTCTCTGAA...TGACACGCTACTGTTGGTTAAATTTAAACATGTTGTACCTGCAGAAATTCTCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| 3UTR CAA 72 bp | AAACATGAAGTTAGTAGTGAGTTACCTAAATTAACTTaGACTGTAATTCTCCAAGAGCAAACCCAAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHEVSSELPKLT*TVILQEQTQEA Trigger: AGCCTCTTGGGTTTGCTCTTGGAGAATTACAGTCAAAGTTAATTTAGGTAACTCACTACTAACTTCATGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGAACAAGTGGTTCGTCTaGGGCTTCCTGATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PTHWSFVFPVLKGHISALNKWFV*GFLIHH Trigger: ATGATGAATCAGGAAGCCCAAGACGAACCACTTGTT...CAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGAAGGAGCTGGTTGACTaGATCAATTCGGCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PTHWSFVFPVLKGHISALKELVD*INSAMN Trigger: ATTCATGGCCGAATTGATCAAGTCAACCAGCTCCTT...CAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTATCTGTTTTAGCGCTTaGAATCCCCATTCTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DTPTHWSFVFPVLKGHISICFSA*NPHSPF Trigger: GAAGGGAGAATGGGGATTCAAAGCGCTAAAACAGAT...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CATCCCTTTCAGGACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGAACAAGTGGTTCGTCTaGGGCTTCCTGATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HPFQDTPTHWSFVFPVLKNKWFV*GFLIHH Trigger: ATGATGAATCAGGAAGCCCAAGACGAACCACTTGTT...CTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTCCTGAAAGGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGTCCGCATGCTTAATGCTGCTTTaGGGTCATCTTCTTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSPQGSHLCTVALSMSACLMLL*GHLLSV Trigger: CACTGAAAGAAGATGACCCAAAAGCAGCATTAAGCA...TGCGGACATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTATCTGTTTTAGCGCTTaGAATCCCCATTCTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGALSFQSSRVTSLHCCLICFSA*NPHSPF Trigger: GAAGGGAGAATGGGGATTCAAAGCGCTAAAACAGAT...AAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGGAGCTGGTTGACTaGATCAATTCGGCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TGALSFQSSRVTSLHCCLKELVD*INSAMN Trigger: ATTCATGGCCGAATTGATCAAGTCAACCAGCTCCTT...AAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGTCCGCAAGTGCTTTAAGCTTTTaGTTGTTCTTCTGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSPQGSHLCTVALSMSASALSF*LFFCAV Trigger: CACTGCACAGAAGAACAACAAAAAGCTTAAAGCACT...TGCGGACATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGAACAAGTGGTTCGTCTaGGGCTTCCTGATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCLSSPQGSHLCTVALSMNKWFV*GFLIHH Trigger: ATGATGAATCAGGAAGCCCAAGACGAACCACTTGTT...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTAGAGAATTTAGTTGGTaGGTCCATTTATCTAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTPTHWSFVFPVLKGHISREFSW*VHLSSA Trigger: TGCGCTAGATAAATGGACCAACCAACTAAATTCTCT...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGTTTTCCAAATCCACATaGGGCTCAGAGTTACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLSSPQGSHLCTVALSMFSKST*GSELLS Trigger: AGACAGTAACTCTGAGCCCAATGTGGATTTGGAAAA...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | GACACACCAACCCACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTCTGTGCAGTGTACATTaGAATTTCCAAAGCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DTPTHWSFVFPVLKGHISLCSVH*NFQSID Trigger: ATCTATGCTTTGGAAATTCAAATGTACACTGCACAG...AGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGTGGGTTGGTGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGCTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTCTGTGCAGTGTACATTaGAATTTCCAAAGCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGALSFQSSRVTSLHCCLLCSVH*NFQSID Trigger: ATCTATGCTTTGGAAATTCAAATGTACACTGCACAG...AAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAGCTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGGCTTTAAGCTTTTTGTaGTTCTTCTGTGCAGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LCLSSPQGSHLCTVALSMALSFL*FFCAVY Trigger: GTACACTGCACAGAAGAACAACAAAAAGCTTAAAGC...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGTCTTTCCAGTCCTCAAGGGTCACATCTCTGCACTGTTGCCTTAAGCATGAGAGAATTTAGTTGGTaGGTCCATTTATCTAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLSSPQGSHLCTVALSMREFSW*VHLSSA Trigger: TGCGCTAGATAAATGGACCAACCAACTAAATTCTCT...CATGCTTAAGGCAACAGTGCAGAGATGTGACCCTTGAGGACTGGAAAGACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATCATGTCGCCCATGACAAATTACTATGGTGTTGTATGTTTAGGGCAAGATTTTCCAAATCCACATaGGGCTCAGAGTTACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDHVAHDKLLWCCMFRARFSKST*GSELLS Trigger: AGACAGTAACTCTGAGCCCAATGTGGATTTGGAAAA...TCTTGCCCTAAACATACAACACCATAGTAATTTGTCATGGGCGACATGATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTAGGGCAAGATGTCAACACAGCATAAATCCCATGGTGTTTTGGTTTTCTATCTGTTTTAGCGCTTaGAATCCCCATTCTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MFRARCQHSINPMVFWFSICFSA*NPHSPF Trigger: GAAGGGAGAATGGGGATTCAAAGCGCTAAAACAGAT...AGAAAACCAAAACACCATGGGATTTATGCTGTGTTGACATCTTGCCCTAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGTTTTCCAAATCCACATaGGGCTCAGAGTTACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSCKNRNRRTQFWRIDILFSKST*GSELLS Trigger: AGACAGTAACTCTGAGCCCAATGTGGATTTGGAAAA...CAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGCGCTTTAAGCTTTTTGTaGTTCTTCTGTGCAGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LAARTEIDGHSFGELTFCALSFL*FFCAVY Trigger: GTACACTGCACAGAAGAACAACAAAAAGCTTAAAGC...GCAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTTGCAGTGCTTTAAGCTTTTaGTTGTTCTTCTGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAARTEIDGHSFGELTFCSALSF*LFFCAV Trigger: CACTGCACAGAAGAACAACAAAAAGCTTAAAGCACT...GCAAAATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028635.6 ENSMUST00000110463.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTAAGGAGCTGGTTGACTaGATCAATTCGGCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FTSCKNRNRRTQFWRIDIKELVD*INSAMN Trigger: ATTCATGGCCGAATTGATCAAGTCAACCAGCTCCTT...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CAA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTTGCTTAATGCTGCTTTaGGGTCATCTTCTTTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: FTSCKNRNRRTQFWRIDICLMLL*GHLLSV Trigger: CACTGAAAGAAGATGACCCAAAAGCAGCATTAAGCA...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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| CDS-3UTR CAA 90 bp | TTTACTAGCTGCAAGAACAGAAATAGACGGACACAGTTTTGGAGAATTGACATTAGAGAATTTAGTTGGTaGGTCCATTTATCTAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: FTSCKNRNRRTQFWRIDIREFSW*VHLSSA Trigger: TGCGCTAGATAAATGGACCAACCAACTAAATTCTCT...AATGTCAATTCTCCAAAACTGTGTCCGTCTATTTCTGTTCTTGCAGCTAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028635.6 ENSMUST00000110462.8 ENSMUST00000110463.8 |
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