Pregenerated sensors for COPG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025607Ensembl transcript IDs: ENSMUST00000048774.13, ENSMUST00000166192.7
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCAGCACTCTCCCCACCCCAGCCCATCGAACCTAAATAGACATTaGCGTAAATACAGTGTTCTGAGTATGAGTCTAAGACTGATTTGC | + |
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Preference number: 1 (lower is better) Translates to: SQHSPHPSPSNLNRH*RKYSVLSMSLRLIC Trigger: GCAAATCAGTCTTAGACTCATACTCAGAACACTGTATTTACGCCAATGTCTATTTAGGTTCGATGGGCTGGGGTGGGGAGAGTGCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR-3UTR TCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGCGCACCGAGGCTGAGTaGGTGAGACATGAGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: GMNVHWLLYDGRSASRWLRTEAE*VRHEMR Trigger: CCTCATCTCATGTCTCACTCACTCAGCCTCGGTGCG...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCCTTTACATGCAGGGCCAAACACTTaGATTTGCTTCTTCAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSGSVTVYERDHLVTPLHAGPNT*ICFFKV Trigger: GACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGC...ATGTAAAGGAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR CCA 72 bp | GGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTaGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GEGTCKCGMNVH*LLYDGRSASRW Trigger: CCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR TCA 72 bp | GCTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATaGATGTCCATTGGCTCCTCTATGATGGCCGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ADVEGKGHVSAE*MSIGSSMMAAQ Trigger: CTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR TCA 72 bp | GCTCCCTTCCGGCCCAATCCTAACTGGAATACAGAGTaGGGGAGGAGCTTGCTATCTCCCTTTCAGGATCTG | + |
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Preference number: 3 (lower is better) Translates to: APFRPNPNWNTE*GRSLLSPFQDL Trigger: CAGATCCTGAAAGGGAGATAGCAAGCTCCTCCCTCACTCTGTATTCCAGTTAGGATTGGGCCGGAAGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR TCA 72 bp | GCCCACTCAAAGCTGCATTGTCGCACCGAGGCTGAGTaGGTGAGACATGAGATGAGGGAAGAAACTCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: AHSKLHCRTEAE*VRHEMREETLK Trigger: CTTTAGAGTTTCTTCCCTCATCTCATGTCTCACTCACTCAGCCTCGGTGCGACAATGCAGCTTTGAGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| 3UTR CCA 72 bp | CATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTaGCTGTTCAGAAAGGCTTTCTCATATAACTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: HWLLYDGRSASR*LFRKAFSYNSC Trigger: ACAGGAGTTATATGAGAAAGCCTTTCTGAACAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR CCA 72 bp | CTCAAAGACAGACAGACAGACAGATGTTTGATCTGCTaGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: LKDRQTDRCLIC*RRAKHLDLLLQ Trigger: TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCTGTCTGTCTGTCTTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| 3UTR CCA 72 bp | TCTCCCCACCCCAGCCCATCGAACCTAAATAGACATTaGCGTAAATACAGTGTTCTGAGTATGAGTCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: SPHPSPSNLNRH*RKYSVLSMSLR Trigger: TCTTAGACTCATACTCAGAACACTGTATTTACGCCAATGTCTATTTAGGTTCGATGGGCTGGGGTGGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| 3UTR TCA 72 bp | CCAGAGATTTACTGTTACTGTTTAGAAAGTCCAAGCTaGATAGTAAATAACAGCCTAGGGGCAGCTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PEIYCYCLESPS*IVNNSLGAAPP Trigger: TGGAGGAGCTGCCCCTAGGCTGTTATTTACTATTCAGCTTGGACTTTCTAAACAGTAACAGTAAATCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR TCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGTCACAGCAGCAGCTCTaGCAGCCTCATTCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GMNVHWLLYDGRSASRWLSQQQL*QPHSPG Trigger: TCCTGGAGAATGAGGCTGTCAGAGCTGCTGCTGTGA...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR GCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGAGAGGGGTGCTTCATTaGCACCTTGTTCAGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GMNVHWLLYDGRSASRWLRGVLH*HLVQGP Trigger: AGGACCCTGAACAAGGTGGCAATGAAGCACCCCTCT...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR TCA 90 bp | GTGCTCCCTTCCGGCCCAATCCTAACTGGAATACAGAGTGAGGGAGGAGCTTGCGTTCACAGTCCTCAATaGATTCACAGAGGTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VLPSGPILTGIQSEGGACVHSPQ*IHRGGL Trigger: TAGCCCACCTCTGTGAATTCATTGAGGACTGTGAAC...GCAAGCTCCTCCCTCACTCTGTATTCCAGTTAGGATTGGGCCGGAAGGGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR TCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGCATGGTACTGCACCATaGTATTGTCACTTGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: GMNVHWLLYDGRSASRWLHGTAP*YCHLMQ Trigger: CTGCATCAAGTGACAATATCATGGTGCAGTACCATG...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR TCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGAGAAGGCTCTCATTCTaGGCCCCAAATTTAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: GMNVHWLLYDGRSASRWLRRLSF*APNLAK Trigger: TTTGGCTAAATTTGGGGCTCAGAATGAGAGCCTTCT...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR GCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGTCTGCTTCTGTAAGCTaGACAGGCTCAGAAGACTTA | + |
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Preference number: 4 (lower is better) Translates to: GMNVHWLLYDGRSASRWLSASVS*TGSEDL Trigger: TAAGTCTTCTGAGCCTGTGCAGCTTACAGAAGCAGA...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR TCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTTCTGCAGAGAGCCCTaGTGGCTGGGCCTCGGTATA | + |
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Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHFCREP*WLGLGI Trigger: TATACCGAGGCCCAGCCATCAGGGCTCTCTGCAGAA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTGTGACAGAGAGCACTaGTGGCCTGCACGACCACCA | + |
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Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHCDREH*WPARPP Trigger: TGGTGGTCGTGCAGGCCATCAGTGCTCTCTGTCACA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTTGTGACAGAGAGCACTaGTGGCCTGCACGACCACCA | + |
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Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSCDREH*WPARPP Trigger: TGGTGGTCGTGCAGGCCATCAGTGCTCTCTGTCACA...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATTCCGAGGGTACTTGTaGCAGAGAGCACTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQFRGYL*QRALMA Trigger: GGCCATCAGTGCTCTCTGTCACAAGTACCCTCGGAA...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCATTCCGAGGGTACTTGTaGCAGAGAGCACTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSFRGYL*QRALMA Trigger: GGCCATCAGTGCTCTCTGTCACAAGTACCCTCGGAA...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAGAGCACTGATGGCCTaGACGACCACCACCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSRALMA*TTTTLN Trigger: GTTCAAGGTGGTGGTCGTGCAGGCCATCAGTGCTCT...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR CCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATAGGGAGGCTGGGAGCTaGGATACAGCACAGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHREAGS*DTAQHF Trigger: GAAGTGCTGTGCTGTATCCCAGCTCCCAGCCTCCCT...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR CCA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCGATTGTAAGGGAGGCTaGGAGCTGGGATACAGCACA | + |
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Preference number: 4 (lower is better) Translates to: DHATSLKTTNREGIATSPDCKGG*ELGYST Trigger: TGTGCTGTATCCCAGCTCCCAGCCTCCCTTACAATC...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTATTCTGCAGAGAGCCCTaGTGGCTGGGCCTCGGTATA | + |
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Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLFCREP*WLGLGI Trigger: TATACCGAGGCCCAGCCATCAGGGCTCTCTGCAGAA...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAACTCGGGGACTTTATCTaGCCTCTCACATGGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQLGDFI*PLTWLH Trigger: ATGCAGCCATGTGAGAGGTCAGATAAAGTCCCCGAG...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGGTAATTTCTGACTTCTaGTCAAAGACAGGAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: GMNVHWLLYDGRSASRWLVISDF*SKTGAI Trigger: TATGGCTCCTGTCTTTGAGCAGAAGTCAGAAATTAC...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR CCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAGATTGTAAGGGAGGCTaGGAGCTGGGATACAGCACA | + |
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Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQDCKGG*ELGYST Trigger: TGTGCTGTATCCCAGCTCCCAGCCTCCCTTACAATC...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCAAAGAAAAGTCATCATaGCGCTGTGCTTCCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: DHATSLKTTNREGIATSPKEKSS*RCASEG Trigger: ACCCTCGGAAGCACAGCGTCATGATGACTTTTCTTT...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTATCACAGCAGCAGCTCTaGCAGCCTCATTCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLSQQQL*QPHSPG Trigger: TCCTGGAGAATGAGGCTGTCAGAGCTGCTGCTGTGA...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAACAGGGTCCTCACAGCTaGATATCTCAAGGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQQGPHS*ISQGWF Trigger: AAACCAGCCTTGAGATATGCAGCTGTGAGGACCCTG...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACAAGAGGGGTGCTTCATTaGCACCTTGTTCAGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LEDHATSLKTTNREGIATRGVLH*HLVQGP Trigger: AGGACCCTGAACAAGGTGGCAATGAAGCACCCCTCT...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAACTTCTCACAGTCACCTaGATGGTCACTCCATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQLLTVT*MVTPSA Trigger: AGCTGATGGAGTGACCATGCAGGTGACTGTGAGAAG...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCACTTCTCACAGTCACCTaGATGGTCACTCCATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSLLTVT*MVTPSA Trigger: AGCTGATGGAGTGACCATGCAGGTGACTGTGAGAAG...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR CCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCAGGGAGGCTGGGAGCTaGGATACAGCACAGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLIREAGS*DTAQHF Trigger: GAAGTGCTGTGCTGTATCCCAGCTCCCAGCCTCCCT...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR CCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTCACAGTCACCTGCATaGTCACTCCATCAGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHSQSPA*SLHQLG Trigger: CCCTAGCTGATGGAGTGACCATGCAGGTGACTGTGA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTGAAAAGTTGAAGAACTaGGACAGCAGGTGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSEKLKN*DSRCQL Trigger: GAGCTGGCACCTGCTGTCTCAGTTCTTCAACTTTTC...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAAGAAAAGTCATCATaGCGCTGTGCTTCCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSKEKSS*RCASEG Trigger: ACCCTCGGAAGCACAGCGTCATGATGACTTTTCTTT...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTACTCGGGGACTTTATCTaGCCTCTCACATGGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLLGDFI*PLTWLH Trigger: ATGCAGCCATGTGAGAGGTCAGATAAAGTCCCCGAG...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACAAATATGCGTGCCTCCTaGAAGACAGCACTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LEDHATSLKTTNREGIATNMRAS*KTALFS Trigger: GGAGAAGAGTGCTGTCTTGCAGGAGGCACGCATATT...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGATCTTTGTCAAGATATaGAAGCATCTTCTTGGATTG | + |
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Preference number: 4 (lower is better) Translates to: GMNVHWLLYDGRSASRWLIFVKI*KHLLGL Trigger: CAATCCAAGAAGATGCTTGCATATCTTGACAAAGAT...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR GCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCAGAGCACTGATGGCCTaGACGACCACCACCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLIRALMA*TTTTLN Trigger: GTTCAAGGTGGTGGTCGTGCAGGCCATCAGTGCTCT...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATCGGATGGTTCCATCTaGACTGTTACTTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQSDGSI*TVTFSS Trigger: GCTGGAGAAAGTAACAGTGCAGATGGAACCATCCGA...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAAAGGTGCCTGCAACTaGTGTAGGATCTTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQKGACN*CRIFIW Trigger: CCAGATGAAGATCCTACAGCAGTTGCAGGCACCTTT...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR GCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCAGGCGTTCTCTCTTTaGTTCTCACAGTCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHQAFSL*FSQSPA Trigger: TGCAGGTGACTGTGAGAAGCAAAGAGAGAACGCCTG...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCAATGCTGGAAAGGATTaGAACCACTACCAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DHATSLKTTNREGIATSPNAGKD*NHYQTP Trigger: AGGAGTCTGGTAGTGGTTCCAATCCTTTCCAGCATT...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCGAGAGCCCTGATGGCTaGGCCTCGGTATACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLESPDG*ASVYIF Trigger: GAAGATGTATACCGAGGCCCAGCCATCAGGGCTCTC...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGGAGCCAACTTCTCTaGCTTAGGAGTCACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQRSQLL*LRSHKC Trigger: ACACTTGTGACTCCTAAGCCAGAGAAGTTGGCTCCT...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTATCACAGTCACCTGCATaGTCACTCCATCAGCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLSQSPA*SLHQLG Trigger: CCCTAGCTGATGGAGTGACCATGCAGGTGACTGTGA...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAGAAAAGTTGAAGAACTaGGACAGCAGGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLEKLKN*DSRCQL Trigger: GAGCTGGCACCTGCTGTCTCAGTTCTTCAACTTTTC...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAGAGCTACAGAAAAGTTaGAGAACTGAGACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSELQKS*RTETAG Trigger: ACCTGCTGTCTCAGTTCTTCAACTTTTCTGTAGCTC...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTGTTCACAGTCCTCAATaGATTCACAGAGGTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSVHSPQ*IHRGGL Trigger: TAGCCCACCTCTGTGAATTCATTGAGGACTGTGAAC...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTGTAAGAGTACAAGGATaGTGGGGAGAAGGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSVRVQG*WGEGSH Trigger: ATGAGAGCCTTCTCCCCAGCATCCTTGTACTCTTAC...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATGTAAGAGTACAAGGATaGTGGGGAGAAGGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHVRVQG*WGEGSH Trigger: ATGAGAGCCTTCTCCCCAGCATCCTTGTACTCTTAC...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCATCTGCTTCTGTAAGCTaGACAGGCTCAGAAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSSASVS*TGSEDL Trigger: TAAGTCTTCTGAGCCTGTGCAGCTTACAGAAGCAGA...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTACAGCTAAAGGTGCCTaGAACTGCTGTAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSTAKGA*NCCRIF Trigger: GAAGATCCTACAGCAGTTGCAGGCACCTTTAGCTGT...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCACTGAGCTGGCTACACTaGATACTTTATCCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSLSWLH*ILYPQW Trigger: CCATTGTGGATAAAGTATCCAGTGTAGCCAGCTCAG...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATGGAAAATGTCTTGCCTaGAAGGAGCCAACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHGKCLA*KEPTSL Trigger: CAGAGAAGTTGGCTCCTTCCAGGCAAGACATTTTCC...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCGCAGCTAACTGTTCTTaGAAAATGTCTTGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DHATSLKTTNREGIATSPAANCS*KMSCLE Trigger: TTCCAGGCAAGACATTTTCCAAGAACAGTTAGCTGC...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCATGTGTAGCATATTCCTaGCTGATTGTAAGGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSCVAYS*LIVREA Trigger: AGCCTCCCTTACAATCAGCCAGGAATATGCTACACA...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTAAGAGTGGACTTTCATaGCCATCCTCGCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSKSGLS*PSSLSF Trigger: GAAAGAAAGCGAGGATGGTCATGAAAGTCCACTCTT...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATGTACAGTTGGGAAGATaGATAATGGCAGAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHVQLGR*IMAEAA Trigger: AGCTGCTTCTGCCATTATTCATCTTCCCAACTGTAC...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCCACCTTGAACTCATCTaGGATTTCAGACACAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHATSLKTTNREGIATSPHLELI*DFRHKR Trigger: TCTTTTGTGTCTGAAATCTCAGATGAGTTCAAGGTG...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCGCACGACCACCACCTTaGACTCATCTGAGATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLARPPP*THLRFQ Trigger: CTGAAATCTCAGATGAGTTCAAGGTGGTGGTCGTGC...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR TCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCGCACGACCACCACCTTaGACTCATCTGAGATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLIARPPP*THLRFQ Trigger: CTGAAATCTCAGATGAGTTCAAGGTGGTGGTCGTGC...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTTCTCTTCCACAATGCTaGTTATGCAGTCCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSSLPQC*LCSPQW Trigger: CCATTGTGGACTGCATAATCAGCATTGTGGAAGAGA...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTGCACTCTTCTCCAAATaGTGGAAAGGATTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSALFSK*WKGLEP Trigger: TGGTTCCAATCCTTTCCAGCATTTGGAGAAGAGTGC...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCAATATGCGTGCCTCCTaGAAGACAGCACTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLNMRAS*KTALFS Trigger: GGAGAAGAGTGCTGTCTTGCAGGAGGCACGCATATT...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR GCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATACCTTTCAACGGCTTaGAACATTGTTCCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQYLSTA*NIVPSV Trigger: CACAGATGGAACAATGTTGCAAGCCGTTGAAAGGTA...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCGTAACAGCAGAGGGGTaGTTCATTGCCACCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLIVTAEG*FIATLF Trigger: GAACAAGGTGGCAATGAAGCACCCCTCTGCTGTTAC...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATGGTCAGTAAACATGTaGTTCACACAGCGAACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQWSVNM*FTQRTK Trigger: TTTCGTTCGCTGTGTGAAGCACATGTTTACTGACCA...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAAAAGGTGCCTGCAACTaGTGTAGGATCTTCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLKGACN*CRIFIW Trigger: CCAGATGAAGATCCTACAGCAGTTGCAGGCACCTTT...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATGACCTCTCACATGGCTaGATACCAAGAAATGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHDLSHG*IPRNVM Trigger: CATCACATTTCTTGGTATGCAGCCATGTGAGAGGTC...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAACTCTTCTCCAAATGCTaGAAAGGATTGGAACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQLFSKC*KGLEPL Trigger: TAGTGGTTCCAATCCTTTCCAGCATTTGGAGAAGAG...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAAGACCAGCGCTGAGCTaGCTACACTGGATACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLRPALS*LHWILY Trigger: ATAAAGTATCCAGTGTAGCCAGCTCAGCGCTGGTCT...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCATGCATATCTCAAGGCTaGTTTAGGAGAGCTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSCISQG*FRRATE Trigger: TTCTGTAGCTCTCCTAAACCAGCCTTGAGATATGCA...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATGAATTCACAGAGGTaGGCTAGACCAGCTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSMNSQR*ARPASL Trigger: TAAAGAAGCTGGTCTAGCCCACCTCTGTGAATTCAT...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAGGAAAATGTCTTGCCTaGAAGGAGCCAACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLGKCLA*KEPTSL Trigger: CAGAGAAGTTGGCTCCTTCCAGGCAAGACATTTTCC...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAACTTTCTCCAGCAGCTaGTCATTTAGAGTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQTFSSS*SFRVLV Trigger: TACCAACACTCTAAATGACCAGCTGCTGGAGAAAGT...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTACATGGTACTGCACCATaGTATTGTCACTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLHGTAP*YCHLMQ Trigger: CTGCATCAAGTGACAATATCATGGTGCAGTACCATG...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAAAGAGTGGACTTTCATaGCCATCCTCGCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLKSGLS*PSSLSF Trigger: GAAAGAAAGCGAGGATGGTCATGAAAGTCCACTCTT...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAGTACAGTTGGGAAGATaGATAATGGCAGAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLVQLGR*IMAEAA Trigger: AGCTGCTTCTGCCATTATTCATCTTCCCAACTGTAC...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAAGAAGGCTCTCATTCTaGGCCCCAAATTTAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLRRLSF*APNLAK Trigger: TTTGGCTAAATTTGGGGCTCAGAATGAGAGCCTTCT...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAAACAATCGAGTCATTaGAAAGAAGGCTTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQKQSSH*KEGFCS Trigger: GCTACAGAAGCCTTCTTTGCAATGACTCGATTGTTT...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTTTATCCACAATGGCCTaGTTCATGTACCTTTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSLSTMA*FMYLST Trigger: CGTTGAAAGGTACATGAAGCAGGCCATTGTGGATAA...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTTATCCACAATGGCCTaGTTCATGTACCTTTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHLSTMA*FMYLST Trigger: CGTTGAAAGGTACATGAAGCAGGCCATTGTGGATAA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTTGGTCAGTAAACATGTaGTTCACACAGCGAACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSWSVNM*FTQRTK Trigger: TTTCGTTCGCTGTGTGAAGCACATGTTTACTGACCA...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCACAGCTAAAGGTGCCTaGAACTGCTGTAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLTAKGA*NCCRIF Trigger: GAAGATCCTACAGCAGTTGCAGGCACCTTTAGCTGT...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACACTCTTCTCCAAATGCTaGAAAGGATTGGAACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LEDHATSLKTTNREGIATLFSKC*KGLEPL Trigger: TAGTGGTTCCAATCCTTTCCAGCATTTGGAGAAGAG...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTACTGAGCTGGCTACACTaGATACTTTATCCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLLSWLH*ILYPQW Trigger: CCATTGTGGATAAAGTATCCAGTGTAGCCAGCTCAG...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCTTGATGCAGCTTCTTaGGCTTCATTTATCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHLDAAS*ASFIHR Trigger: ACGATGGATAAATGAAGCCCAAGAAGCTGCATCAAG...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATGCATATCTCAAGGCTaGTTTAGGAGAGCTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEDHATSLKTTNREGIATCISQG*FRRATE Trigger: TTCTGTAGCTCTCCTAAACCAGCCTTGAGATATGCA...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCTCTTTGCCCAATAAGTaGAGAATTTTAGTAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHATSLKTTNREGIATSPSLPNK*RILVAR Trigger: TCTGGCTACTAAAATTCTCCACTTATTGGGCAAAGA...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCAGGAGCCAACTTCTCTaGCTTAGGAGTCACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLRSQLL*LRSHKC Trigger: ACACTTGTGACTCCTAAGCCAGAGAAGTTGGCTCCT...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACAACTTTCTCCAGCAGCTaGTCATTTAGAGTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEDHATSLKTTNREGIATTFSSS*SFRVLV Trigger: TACCAACACTCTAAATGACCAGCTGCTGGAGAAAGT...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTTTCATAGGAATCGGATaGTTCCATCTGCACTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSFIGIG*FHLHCY Trigger: GTAACAGTGCAGATGGAACCATCCGATTCCTATGAA...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATATCCATCTTCATCTaGAACTCCAGTATTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSISIFI*NSSIRV Trigger: GACCCTAATACTGGAGTTCCAGATGAAGATGGATAT...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAATATCCATCTTCATCTaGAACTCCAGTATTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQISIFI*NSSIRV Trigger: GACCCTAATACTGGAGTTCCAGATGAAGATGGATAT...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTAGTGTTCACCCTGGTTaGGTAAGTAAAGAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RCLICWRRAKHLDLLLQSSVHPG*VSKESL Trigger: CAAAGATTCTTTACTTACTCAACCAGGGTGAACACT...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCCATGATATTGTCACTTaGTGCAGCTTCTTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLHDIVT*CSFLGF Trigger: GAAGCCCAAGAAGCTGCATCAAGTGACAATATCATG...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACAACAGTATGCAAACTGTaGTTTGAGACCAGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEDHATSLKTTNREGIATTVCKL*FETRFG Trigger: ACCAAATCTGGTCTCAAATCACAGTTTGCATACTGT...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAACATAGCAAGAGGAATTaGCTTCATATCAAAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQHSKRN*LHIKGF Trigger: AAACCCTTTGATATGAAGTCAATTCCTCTTGCTATG...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCGCACTCTTCTCCAAATaGTGGAAAGGATTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLALFSK*WKGLEP Trigger: TGGTTCCAATCCTTTCCAGCATTTGGAGAAGAGTGC...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAGGCGTTCTCTCTTTaGTTCTCACAGTCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SERLSHITPVLKQASFQRQAFSL*FSQSPA Trigger: TGCAGGTGACTGTGAGAAGCAAAGAGAGAACGCCTG...TCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCAATGCTGGAAAGGATTaGAACCACTACCAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLINAGKD*NHYQTP Trigger: AGGAGTCTGGTAGTGGTTCCAATCCTTTCCAGCATT...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATACTTTATCCACAATaGCCTGCTTCATGTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQMFDLLAQGQTLGFASSILYPQ*PASCTF Trigger: AAAGGTACATGAAGCAGGCCATTGTGGATAAAGTAT...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTATTCATAGGAATCGGATaGTTCCATCTGCACTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLFIGIG*FHLHCY Trigger: GTAACAGTGCAGATGGAACCATCCGATTCCTATGAA...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCTGTGTAGCATATTCCTaGCTGATTGTAAGGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLCVAYS*LIVREA Trigger: AGCCTCCCTTACAATCAGCCAGGAATATGCTACACA...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAAGTGTTCACCCTGGTTaGGTAAGTAAAGAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLSVHPG*VSKESL Trigger: CAAAGATTCTTTACTTACTCAACCAGGGTGAACACT...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTCCTGTTTGAGTCTGTaGTTAAGTTTTCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHSCLSL*LSFLSP Trigger: TGGACTTAGAAAACTTAATCACAGACTCAAACAGGA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTACACCTTGAACTCATCTaGGATTTCAGACACAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLHLELI*DFRHKR Trigger: TCTTTTGTGTCTGAAATCTCAGATGAGTTCAAGGTG...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCTACCTTTCAACGGCTTaGAACATTGTTCCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLIYLSTA*NIVPSV Trigger: CACAGATGGAACAATGTTGCAAGCCGTTGAAAGGTA...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAGTAATTTCTGACTTCTaGTCAAAGACAGGAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLVISDF*SKTGAI Trigger: TATGGCTCCTGTCTTTGAGCAGAAGTCAGAAATTAC...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATATACTTTATCCACAATaGCCTGCTTCATGTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLICWRRAKHLDLLLQSHILYPQ*PASCTF Trigger: AAAGGTACATGAAGCAGGCCATTGTGGATAAAGTAT...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACAACTTATTTAACATCTTaGAGACAGCAAGCCGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEDHATSLKTTNREGIATTYLTS*RQQADH Trigger: ATGATCGGCTTGCTGTCTCCAAGATGTTAAATAAGT...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATTATGCAGTCCACAATaGCCTTTTTGTATTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQLCSPQ*PFCIQN Trigger: GTTTTGAATACAAAAAGGCCATTGTGGACTGCATAA...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAATTGGTACAGTCAAACTaGAATACAATATGGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRCLICWRRAKHLDLLLQLVQSN*NTIWSV Trigger: TACTGACCATATTGTATTCCAGTTTGACTGTACCAA...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCACAGTATGCAAACTGTaGTTTGAGACCAGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLITVCKL*FETRFG Trigger: ACCAAATCTGGTCTCAAATCACAGTTTGCATACTGT...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTATCCTGTTTGAGTCTGTaGTTAAGTTTTCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGQTLGFASSKSSLLSCLSL*LSFLSP Trigger: TGGACTTAGAAAACTTAATCACAGACTCAAACAGGA...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCTCGGATGGTTCCATCTaGACTGTTACTTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLASDGSI*TVTFSS Trigger: GCTGGAGAAAGTAACAGTGCAGATGGAACCATCCGA...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | CTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCACTTATTTAACATCTTaGAGACAGCAAGCCGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPFQDLLQFMRGIILSLTYLTS*RQQADH Trigger: ATGATCGGCTTGCTGTCTCCAAGATGTTAAATAAGT...GAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAGGGAGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCCTTTACATATGAATTCACAGAGGTaGGCTAGACCAGCTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVTVYERDHLVTPLHMNSQR*ARPASL Trigger: TAAAGAAGCTGGTCTAGCCCACCTCTGTGAATTCAT...ATGTAAAGGAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CCA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCTCTTTGCCCAATAAGTaGAGAATTTTAGTAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAQGQTLGFASSKSSLLISLPNK*RILVAR Trigger: TCTGGCTACTAAAATTCTCCACTTATTGGGCAAAGA...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCGAGCTACAGAAAAGTTaGAGAACTGAGACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLAELQKS*RTETAG Trigger: ACCTGCTGTCTCAGTTCTTCAACTTTTCTGTAGCTC...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGAAAACAATCGAGTCATTaGAAAGAAGGCTTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SERLSHITPVLKQASFQRKQSSH*KEGFCS Trigger: GCTACAGAAGCCTTCTTTGCAATGACTCGATTGTTT...TCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR GCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCGACCTCTCACATGGCTaGATACCAAGAAATGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLADLSHG*IPRNVM Trigger: CATCACATTTCTTGGTATGCAGCCATGTGAGAGGTC...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCCTTGATGCAGCTTCTTaGGCTTCATTTATCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLALDAAS*ASFIHR Trigger: ACGATGGATAAATGAAGCCCAAGAAGCTGCATCAAG...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCGCAGCTAACTGTTCTTaGAAAATGTCTTGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLAAANCS*KMSCLE Trigger: TTCCAGGCAAGACATTTTCCAAGAACAGTTAGCTGC...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR TCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCCATAGCAAGAGGAATTaGCTTCATATCAAAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLAHSKRN*LHIKGF Trigger: AAACCCTTTGATATGAAGTCAATTCCTCTTGCTATG...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCTTATGCAGTCCACAATaGCCTTTTTGTATTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLALCSPQ*PFCIQN Trigger: GTTTTGAATACAAAAAGGCCATTGTGGACTGCATAA...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCTTGGTACAGTCAAACTaGAATACAATATGGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSSLLIFMCDSWKIMPLALVQSN*NTIWSV Trigger: TACTGACCATATTGTATTCCAGTTTGACTGTACCAA...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCATCCCGCTGGCTGCAGGTGCCAGCTCTCTaGCAGTACAGTTGGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GMNVHWLLYDGRSASRWLQVPAL*QYSWED Trigger: ATCTTCCCAACTGTACTGCAAGAGAGCTGGCACCTG...CAGCCAGCGGGATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS GCA 90 bp | AAGATAACATCCACAGGCGTTCTCTCTTTGCTTCTCACAGTCACCTaGATGGTCACTCCATCAGCTAGGGCCAGCCTGGACCGCACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KITSTGVLSLLLTVT*MVTPSARASLDRTN Trigger: ATTGGTGCGGTCCAGGCTGGCCCTAGCTGATGGAGTGACCATGCAGGTGACTGTGAGAAGCAAAGAGAGAACGCCTGTGGATGTTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCACAGGTGCCAGCTCTCTaGCAGTACAGTTGGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RQMFDLLAQGQTLGFASSQVPAL*QYSWED Trigger: ATCTTCCCAACTGTACTGCAAGAGAGCTGGCACCTG...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GTGCTCCCTTCCGGCCCAATCCTAACTGGAATACAGAGTGAGGGAGGAGCTTGCTATGCAAACTGTGATTaGAGACCAGATTTGGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLPSGPILTGIQSEGGACYANCD*RPDLVN Trigger: GTTTACCAAATCTGGTCTCAAATCACAGTTTGCATA...GCAAGCTCCTCCCTCACTCTGTATTCCAGTTAGGATTGGGCCGGAAGGGAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CAA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTGCTTCATTGCCACCTaGTTCAGGGTCCTCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLICWRRAKHLDLLLQSHCFIAT*FRVLTA Trigger: AGCTGTGAGGACCCTGAACAAGGTGGCAATGAAGCA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTTGCTTCATTGCCACCTaGTTCAGGGTCCTCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCLICWRRAKHLDLLLQSCFIAT*FRVLTA Trigger: AGCTGTGAGGACCCTGAACAAGGTGGCAATGAAGCA...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCCTCTCGCTTCCTGTTTaGAGCAATGTTGTAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DHATSLKTTNREGIATSPLSLPV*SNVVMA Trigger: GGCCATTACAACATTGCTCAAAACAGGAAGCGAGAG...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCTGCACGACCACCACCTaGAACTCATCTGAGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DHATSLKTTNREGIATSPCTTTT*NSSEIS Trigger: TGAAATCTCAGATGAGTTCAAGGTGGTGGTCGTGCA...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCGTTCTAGGGCCCTCTTaGCCCAATAAGTGGAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: DHATSLKTTNREGIATSPVLGPS*PNKWRI Trigger: AATTCTCCACTTATTGGGCAAAGAGGGCCCTAGAAC...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATACAGGCGTTCTCTCTTaGCTTCTCACAGTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLICWRRAKHLDLLLQSHTGVLS*LLTVTC Trigger: GCAGGTGACTGTGAGAAGCAAAGAGAGAACGCCTGT...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS GCA 90 bp | GTCACAATCCCGGACTGTGAACTTCATGGTACAGCTAAAGGTGCCTaGAACTGCTGTAGGATCTTCATCTGGCAATCGAACAAGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VTIPDCELHGTAKGA*NCCRIFIWQSNKCV Trigger: TACACACTTGTTCGATTGCCAGATGAAGATCCTACAGCAGTTGCAGGCACCTTTAGCTGTACCATGAAGTTCACAGTCCGGGATTGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS CCA 90 bp | AAGAGACCAGCGCTGAGCTGGCTACACTGGATACTTTATCCACAATaGCCTGCTTCATGTACCTTTCAACGGCTTGCAACATTGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRPALSWLHWILYPQ*PASCTFQRLATLFH Trigger: ATGGAACAATGTTGCAAGCCGTTGAAAGGTACATGAAGCAGGCCATTGTGGATAAAGTATCCAGTGTAGCCAGCTCAGCGCTGGTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS CCA 90 bp | GTAGCCAGAACGGTATGTTCACAGTCCTCAATGAATTCACAGAGGTaGGCTAGACCAGCTTCTTTACTCTCAGGGTTCTCTTCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: VARTVCSQSSMNSQR*ARPASLLSGFSSTM Trigger: CATTGTGGAAGAGAACCCTGAGAGTAAAGAAGCTGGTCTAGCCCACCTCTGTGAATTCATTGAGGACTGTGAACATACCGTTCTGGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS GCA 90 bp | TGCTTCACACAGCGAACGAAATACTCTGTCTCTGCTTCTGTAAGCTaGACAGGCTCAGAAGACTTAAACAAGGGTCCCAGGTTCATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CFTQRTKYSVSASVS*TGSEDLNKGPRFIN Trigger: GTTTATGAACCTGGGACCCTTGTTTAAGTCTTCTGAGCCTGTGCAGCTTACAGAAGCAGAGACAGAGTATTTCGTTCGCTGTGTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS GCA 90 bp | GTCAGTAAACATGTGCTTCACACAGCGAACGAAATACTCTGTCTCTaGTTCTGTAAGCTGCACAGGCTCAGAAGACTTAAACAAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSKHVLHTANEILCL*FCKLHRLRRLKQGS Trigger: GGACCCTTGTTTAAGTCTTCTGAGCCTGTGCAGCTTACAGAAGCAGAGACAGAGTATTTCGTTCGCTGTGTGAAGCACATGTTTACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS GCA 90 bp | ATCCCGGACTGTGAACTTCATGGTACAGCTAAAGGTGCCTGCAACTaGTGTAGGATCTTCATCTGGCAATCGAACAAGTGTGTAGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: IPDCELHGTAKGACN*CRIFIWQSNKCVAY Trigger: ATATGCTACACACTTGTTCGATTGCCAGATGAAGATCCTACAGCAGTTGCAGGCACCTTTAGCTGTACCATGAAGTTCACAGTCCGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATAAATGCTGGAAAGGATaGGAACCACTACCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLICWRRAKHLDLLLQSHKCWKG*EPLPDS Trigger: GGAGTCTGGTAGTGGTTCCAATCCTTTCCAGCATTT...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTTTCCAGTCATGTCCTaGGTCAGACTGCTTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLICWRRAKHLDLLLQSHFPVMS*VRLLVT Trigger: TGTCACAAGCAGTCTGACCAAGGACATGACTGGAAA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAGTACCTTTCAACGGCTaGCAACATTGTTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQMFDLLAQGQTLGFASSVPFNG*QHCSIC Trigger: ACAGATGGAACAATGTTGCAAGCCGTTGAAAGGTAC...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCTACTGCACCATGATATaGTCACTTGATGCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DHATSLKTTNREGIATSPYCTMI*SLDAAS Trigger: AGAAGCTGCATCAAGTGACAATATCATGGTGCAGTA...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCTCTCGCTTCCTGTTTaGAGCAATGTTGTAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLICWRRAKHLDLLLQSHLSLPV*SNVVMA Trigger: GGCCATTACAACATTGCTCAAAACAGGAAGCGAGAG...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATGCACGACCACCACCTaGAACTCATCTGAGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEDHATSLKTTNREGIATCTTTT*NSSEIS Trigger: TGAAATCTCAGATGAGTTCAAGGTGGTGGTCGTGCA...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAACATCCGCCTCAGCGTTaGATCATTAGATTGAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: DRCLICWRRAKHLDLLLQHPPQR*IIRLKQ Trigger: TTGTTTCAATCTAATGATCAAACGCTGAGGCGGATG...TTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCACATCCGCCTCAGCGTTaGATCATTAGATTGAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RQMFDLLAQGQTLGFASSHPPQR*IIRLKQ Trigger: TTGTTTCAATCTAATGATCAAACGCTGAGGCGGATG...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATTTTTCTAAGTCCAGATaGCAGGCAGTAACAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLICWRRAKHLDLLLQSHFSKSR*QAVTAE Trigger: CTCTGCTGTTACTGCCTGCAATCTGGACTTAGAAAA...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCTCCACAATGGCCTTTTaGTATTCAAAACCTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DHATSLKTTNREGIATSPSTMAF*YSKPPS Trigger: TGATGGAGGTTTTGAATACAAAAAGGCCATTGTGGA...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAGTTCTAGGGCCCTCTTaGCCCAATAAGTGGAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LLAQGQTLGFASSKSSLLVLGPS*PNKWRI Trigger: AATTCTCCACTTATTGGGCAAAGAGGGCCCTAGAAC...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCATGAATCTGATATACTaGGAGGGAACAGGAGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: DHATSLKTTNREGIATSPMNLIY*EGTGVL Trigger: TAGAACTCCTGTTCCCTCCAAGTATATCAGATTCAT...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | GATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATCACCCGAGACTGTCAGACCATaGAAGATATATGTAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: DHATSLKTTNREGIATSPETVRP*KIYVAF Trigger: GAATGCTACATATATCTTCAATGGTCTGACAGTCTC...GGGTGATGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS GCA 90 bp | CATCCGCCTCAGCGTTTGATCATTAGATTGAAACAATCGAGTCATTaGAAAGAAGGCTTCTGTAGCTTCCATAGTTCCGAAGTGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: HPPQRLIIRLKQSSH*KEGFCSFHSSEVFT Trigger: GGTGAACACTTCGGAACTATGGAAGCTACAGAAGCCTTCTTTGCAATGACTCGATTGTTTCAATCTAATGATCAAACGCTGAGGCGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATACTGCACCATGATATaGTCACTTGATGCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEDHATSLKTTNREGIATYCTMI*SLDAAS Trigger: AGAAGCTGCATCAAGTGACAATATCATGGTGCAGTA...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTATTTTCTAAGTCCAGATaGCAGGCAGTAACAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLAQGQTLGFASSKSSLLFSKSR*QAVTAE Trigger: CTCTGCTGTTACTGCCTGCAATCTGGACTTAGAAAA...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | AGACAGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAGAGACTGTCAGACCATaGAAGATATATGTAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RQMFDLLAQGQTLGFASSETVRP*KIYVAF Trigger: GAATGCTACATATATCTTCAATGGTCTGACAGTCTC...TGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS CCA 90 bp | ACTTTCTCCAGCAGCTGGTCATTTAGAGTGTTGGTACAGTCAAACTaGAATACAATATGGTCAGTAAACATGTGCTTCACACAGCGAACG | + |
|
Preference number: 5 (lower is better) Translates to: TFSSSWSFRVLVQSN*NTIWSVNMCFTQRT Trigger: CGTTCGCTGTGTGAAGCACATGTTTACTGACCATATTGTATTCCAGTTTGACTGTACCAACACTCTAAATGACCAGCTGCTGGAGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAAAGCATCTTCTTGGATaGATGGGCGTTTCGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLAQGQTLGFASSKSSLLKHLLG*MGVSLN Trigger: ATTCAACGAAACGCCCATCAATCCAAGAAGATGCTT...TAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATAGAAATGTGATGATGTaGTTGACAGCTTCTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLICWRRAKHLDLLLQSHRNVMM*LTASSR Trigger: CCTTGAAGAAGCTGTCAACAACATCATCACATTTCT...ATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTCACTCCTTTACATAAATGCTGGAAAGGATaGGAACCACTACCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSVTVYERDHLVTPLHKCWKG*EPLPDS Trigger: GGAGTCTGGTAGTGGTTCCAATCCTTTCCAGCATTT...ATGTAAAGGAGTGACAAGATGATCCCTCTCATAAACTGTAACAGATCCTGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
||
| CDS-3UTR CAA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCAAGCATCTTCTTGGATaGATGGGCGTTTCGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LAQGQTLGFASSKSSLLIKHLLG*MGVSLN Trigger: ATTCAACGAAACGCCCATCAATCCAAGAAGATGCTT...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | AGATGTTTGATCTGCTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCGTTTGATCATTAGATaGAAACAATCGAGTCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCLICWRRAKHLDLLLQSRLIIR*KQSSHC Trigger: GCAATGACTCGATTGTTTCAATCTAATGATCAAACG...ACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAGCAGATCAAACATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACATATGCAAACTGTGATTaGAGACCAGATTTGGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LEDHATSLKTTNREGIATYANCD*RPDLVN Trigger: GTTTACCAAATCTGGTCTCAAATCACAGTTTGCATA...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGATCATGCCACTAGCCTAAAAACCACCAATAGGGAGGGCATAGCAACAAATGTGATGATGTTGTaGACAGCTTCAAGGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEDHATSLKTTNREGIATNVMML*TASRVF Trigger: AAAAACCCTTGAAGCTGTCAACAACATCATCACATT...TGTTGCTATGCCCTCCCTATTGGTGGTTTTTAGGCTAGTGGCATGATCTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | CTGGCGCAGGGCCAAACACTTGGATTTGCTTCTTCAAAGTCATCATTATTAATCTCATCTCGAAGCATGTaGGAAAGAAAAGTCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LAQGQTLGFASSKSSLLISSRSM*ERKVIM Trigger: CATGATGACTTTTCTTTCCAACATGCTTCGAGATGA...GATTAATAATGATGACTTTGAAGAAGCAAATCCAAGTGTTTGGCCCTGCGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCTTTCCAGTCATGTCCTaGGTCAGACTGCTTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KSSLLIFMCDSWKIMPLAFPVMS*VRLLVT Trigger: TGTCACAAGCAGTCTGACCAAGGACATGACTGGAAA...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR CAA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCGTACCTTTCAACGGCTaGCAACATTGTTCCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: KSSLLIFMCDSWKIMPLAVPFNG*QHCSIC Trigger: ACAGATGGAACAATGTTGCAAGCCGTTGAAAGGTAC...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS-3UTR CAA 90 bp | TCAGAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGAATGAATCTGATATACTaGGAGGGAACAGGAGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: SERLSHITPVLKQASFQRMNLIY*EGTGVL Trigger: TAGAACTCCTGTTCCCTCCAAGTATATCAGATTCAT...TCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS-3UTR CAA 90 bp | AAGTCATCATTATTAATCTTTATGTGTGATTCTTGGAAGATCATGCCACTAGCCAATGTGATGATGTTGTaGACAGCTTCTTCAAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: KSSLLIFMCDSWKIMPLANVMML*TASSRV Trigger: AACCCTTGAAGAAGCTGTCAACAACATCATCACATT...GGCTAGTGGCATGATCTTCCAAGAATCACACATAAAGATTAATAATGATGACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS GCA 72 bp | TCCACAGGCGTTCTCTCTTTGCTTCTCACAGTCACCTaGATGGTCACTCCATCAGCTAGGGCCAGCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: STGVLSLLLTVT*MVTPSARASLD Trigger: GTCCAGGCTGGCCCTAGCTGATGGAGTGACCATGCAGGTGACTGTGAGAAGCAAAGAGAGAACGCCTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | TCTAAGTCCAGATTGCAGGCAGTAACAGCAGAGGGGTaGTTCATTGCCACCTTGTTCAGGGTCCTCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SKSRLQAVTAEG*FIATLFRVLTA Trigger: AGCTGTGAGGACCCTGAACAAGGTGGCAATGAAGCACCCCTCTGCTGTTACTGCCTGCAATCTGGACTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | GTGCTTCATTGCCACCTTGTTCAGGGTCCTCACAGCTaGATATCTCAAGGCTGGTTTAGGAGAGCTACAGAA | + |
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Preference number: 6 (lower is better) Translates to: VLHCHLVQGPHS*ISQGWFRRATE Trigger: TTCTGTAGCTCTCCTAAACCAGCCTTGAGATATGCAGCTGTGAGGACCCTGAACAAGGTGGCAATGAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | CAGCGAACGAAATACTCTGTCTCTGCTTCTGTAAGCTaGACAGGCTCAGAAGACTTAAACAAGGGTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QRTKYSVSASVS*TGSEDLNKGPR Trigger: CCTGGGACCCTTGTTTAAGTCTTCTGAGCCTGTGCAGCTTACAGAAGCAGAGACAGAGTATTTCGTTCGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CCA 72 bp | GCGCTGAGCTGGCTACACTGGATACTTTATCCACAATaGCCTGCTTCATGTACCTTTCAACGGCTTGCAACA | + |
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Preference number: 6 (lower is better) Translates to: ALSWLHWILYPQ*PASCTFQRLAT Trigger: TGTTGCAAGCCGTTGAAAGGTACATGAAGCAGGCCATTGTGGATAAAGTATCCAGTGTAGCCAGCTCAGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CCA 72 bp | GTGTGTAGCATATTCCTGGCTGATTGTAAGGGAGGCTaGGAGCTGGGATACAGCACAGCACTTCATAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: VCSIFLADCKGG*ELGYSTALHRN Trigger: ATTCCTATGAAGTGCTGTGCTGTATCCCAGCTCCCAGCCTCCCTTACAATCAGCCAGGAATATGCTACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | TCCACAATGGCCTGCTTCATGTACCTTTCAACGGCTTaGAACATTGTTCCATCTGTGATTCTGCAGAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: STMACFMYLSTA*NIVPSVILQRA Trigger: GGCTCTCTGCAGAATCACAGATGGAACAATGTTGCAAGCCGTTGAAAGGTACATGAAGCAGGCCATTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CCA 72 bp | TTCATCTGGCAATCGAACAAGTGTGTAGCATATTCCTaGCTGATTGTAAGGGAGGCTGGGAGCTGGGATACA | + |
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Preference number: 6 (lower is better) Translates to: FIWQSNKCVAYS*LIVREAGSWDT Trigger: TGTATCCCAGCTCCCAGCCTCCCTTACAATCAGCCAGGAATATGCTACACACTTGTTCGATTGCCAGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CCA 72 bp | GCTAAAGGTGCCTGCAACTGCTGTAGGATCTTCATCTaGCAATCGAACAAGTGTGTAGCATATTCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AKGACNCCRIFI*QSNKCVAYSWL Trigger: CAGCCAGGAATATGCTACACACTTGTTCGATTGCCAGATGAAGATCCTACAGCAGTTGCAGGCACCTTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 90 bp | GCAATGCTCCTGTTTGAGTCTGTGATTAAGTTTTCTAAGTCCAGATaGCAGGCAGTAACAGCAGAGGGGTGCTTCATTGCCACCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: AMLLFESVIKFSKSR*QAVTAEGCFIATLF Trigger: GAACAAGGTGGCAATGAAGCACCCCTCTGCTGTTACTGCCTGCAATCTGGACTTAGAAAACTTAATCACAGACTCAAACAGGAGCATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 90 bp | GCCTCATTCTCCAGGACCACCCTATTAAAAATGAATCTGATATACTaGGAGGGAACAGGAGTTCTAGGGCCCTCTTTGCCCAATAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASFSRTTLLKMNLIY*EGTGVLGPSLPNKW Trigger: CCACTTATTGGGCAAAGAGGGCCCTAGAACTCCTGTTCCCTCCAAGTATATCAGATTCATTTTTAATAGGGTGGTCCTGGAGAATGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS TCA 72 bp | CATCATCTCGAAGCATGTTGGAAAGAAAAGTCATCATaGCGCTGTGCTTCCGAGGGTACTTGTGACAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: HHLEACWKEKSS*RCASEGTCDRE Trigger: CTCTCTGTCACAAGTACCCTCGGAAGCACAGCGTCATGATGACTTTTCTTTCCAACATGCTTCGAGATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS TCA 72 bp | GAGGGAGTGGGAGTTCTTATTCTCGGGGACTTTATCTaGCCTCTCACATGGCTGCATACCAAGAAATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: EGVGVLILGDFI*PLTWLHTKKCD Trigger: ATCACATTTCTTGGTATGCAGCCATGTGAGAGGTCAGATAAAGTCCCCGAGAATAAGAACTCCCACTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CCA 72 bp | ACGGTATGTTCACAGTCCTCAATGAATTCACAGAGGTaGGCTAGACCAGCTTCTTTACTCTCAGGGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TVCSQSSMNSQR*ARPASLLSGFS Trigger: AGAGAACCCTGAGAGTAAAGAAGCTGGTCTAGCCCACCTCTGTGAATTCATTGAGGACTGTGAACATACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 72 bp | ATATGCAAGCATCTTCTTGGATTGATGGGCGTTTCGTaGAATATGCGTGCCTCCTGCAAGACAGCACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ICKHLLGLMGVS*NMRASCKTALF Trigger: GAAGAGTGCTGTCTTGCAGGAGGCACGCATATTCAACGAAACGCCCATCAATCCAAGAAGATGCTTGCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | CATGTGCTTCACACAGCGAACGAAATACTCTGTCTCTaGTTCTGTAAGCTGCACAGGCTCAGAAGACTTAAA | + |
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Preference number: 6 (lower is better) Translates to: HVLHTANEILCL*FCKLHRLRRLK Trigger: TTTAAGTCTTCTGAGCCTGTGCAGCTTACAGAAGCAGAGACAGAGTATTTCGTTCGCTGTGTGAAGCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | TGTGAACTTCATGGTACAGCTAAAGGTGCCTGCAACTaGTGTAGGATCTTCATCTGGCAATCGAACAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: CELHGTAKGACN*CRIFIWQSNKC Trigger: ACACTTGTTCGATTGCCAGATGAAGATCCTACAGCAGTTGCAGGCACCTTTAGCTGTACCATGAAGTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 72 bp | CTGTTTGAGTCTGTGATTAAGTTTTCTAAGTCCAGATaGCAGGCAGTAACAGCAGAGGGGTGCTTCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: LFESVIKFSKSR*QAVTAEGCFIA Trigger: GGCAATGAAGCACCCCTCTGCTGTTACTGCCTGCAATCTGGACTTAGAAAACTTAATCACAGACTCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 72 bp | ATATACTTGGAGGGAACAGGAGTTCTAGGGCCCTCTTaGCCCAATAAGTGGAGAATTTTAGTAGCCAGAACG | + |
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Preference number: 6 (lower is better) Translates to: IYLEGTGVLGPS*PNKWRILVART Trigger: CGTTCTGGCTACTAAAATTCTCCACTTATTGGGCAAAGAGGGCCCTAGAACTCCTGTTCCCTCCAAGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | TCTGGCTTAGGAGTCACAAGTGTAATTTCTGACTTCTaGTCAAAGACAGGAGCCATAGCAAGAGGAATTGAC | + |
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Preference number: 6 (lower is better) Translates to: SGLGVTSVISDF*SKTGAIARGID Trigger: GTCAATTCCTCTTGCTATGGCTCCTGTCTTTGAGCAGAAGTCAGAAATTACACTTGTGACTCCTAAGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 72 bp | AGAATCTTTGTCAAGATATGCAAGCATCTTCTTGGATaGATGGGCGTTTCGTTGAATATGCGTGCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RIFVKICKHLLG*MGVSLNMRASC Trigger: GCAGGAGGCACGCATATTCAACGAAACGCCCATCAATCCAAGAAGATGCTTGCATATCTTGACAAAGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 90 bp | ATGAATCTGATATACTTGGAGGGAACAGGAGTTCTAGGGCCCTCTTaGCCCAATAAGTGGAGAATTTTAGTAGCCAGAACGGTATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: MNLIYLEGTGVLGPS*PNKWRILVARTVCS Trigger: TGAACATACCGTTCTGGCTACTAAAATTCTCCACTTATTGGGCAAAGAGGGCCCTAGAACTCCTGTTCCCTCCAAGTATATCAGATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CCA 72 bp | TTCCAGCACATATTCATCATCATATCCATCTTCATCTaGAACTCCAGTATTAGGGTCACAATCCCGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: FQHIFIIISIFI*NSSIRVTIPDC Trigger: ACAGTCCGGGATTGTGACCCTAATACTGGAGTTCCAGATGAAGATGGATATGATGATGAATATGTGCTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 72 bp | TCACATGGCTGCATACCAAGAAATGTGATGATGTTGTaGACAGCTTCTTCAAGGGTTTTTGTAGAGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SHGCIPRNVMML*TASSRVFVELR Trigger: CCTGAGCTCTACAAAAACCCTTGAAGAAGCTGTCAACAACATCATCACATTTCTTGGTATGCAGCCATGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS CAA 72 bp | CTCTCACATGGCTGCATACCAAGAAATGTGATGATGTaGTTGACAGCTTCTTCAAGGGTTTTTGTAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSHGCIPRNVMM*LTASSRVFVEL Trigger: GAGCTCTACAAAAACCCTTGAAGAAGCTGTCAACAACATCATCACATTTCTTGGTATGCAGCCATGTGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048774.13 |
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| CDS CCA 72 bp | ATATCAAAGGGTTTTTCTGAAGGCTCCAATGTATACTaGTGTAAGGCCTTTTCCATCCCTGGTATAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: ISKGFSEGSNVY*CKAFSIPGIET Trigger: AGTCTCTATACCAGGGATGGAAAAGGCCTTACACCAGTATACATTGGAGCCTTCAGAAAAACCCTTTGATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 72 bp | TCCACAATGCTGATTATGCAGTCCACAATGGCCTTTTaGTATTCAAAACCTCCATCATCTCGAAGCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: STMLIMQSTMAF*YSKPPSSRSML Trigger: CAACATGCTTCGAGATGATGGAGGTTTTGAATACAAAAAGGCCATTGTGGACTGCATAATCAGCATTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS GCA 72 bp | CAGCGTTTGATCATTAGATTGAAACAATCGAGTCATTaGAAAGAAGGCTTCTGTAGCTTCCATAGTTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: QRLIIRLKQSSH*KEGFCSFHSSE Trigger: TTCGGAACTATGGAAGCTACAGAAGCCTTCTTTGCAATGACTCGATTGTTTCAATCTAATGATCAAACGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CCA 72 bp | AGCAGCTGGTCATTTAGAGTGTTGGTACAGTCAAACTaGAATACAATATGGTCAGTAAACATGTGCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: SSWSFRVLVQSN*NTIWSVNMCFT Trigger: TGTGAAGCACATGTTTACTGACCATATTGTATTCCAGTTTGACTGTACCAACACTCTAAATGACCAGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 90 bp | ATTCGAATCAGCATACAGTATGCAAACTGTGATTTGAGACCAGATTaGGTAAACTTATTTAACATCTTGGAGACAGCAAGCCGATCATTC | + |
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Preference number: 6 (lower is better) Translates to: IRISIQYANCDLRPD*VNLFNILETASRSF Trigger: GAATGATCGGCTTGCTGTCTCCAAGATGTTAAATAAGTTTACCAAATCTGGTCTCAAATCACAGTTTGCATACTGTATGCTGATTCGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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| CDS CAA 72 bp | AGCATACAGTATGCAAACTGTGATTTGAGACCAGATTaGGTAAACTTATTTAACATCTTGGAGACAGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SIQYANCDLRPD*VNLFNILETAS Trigger: GCTTGCTGTCTCCAAGATGTTAAATAAGTTTACCAAATCTGGTCTCAAATCACAGTTTGCATACTGTATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048774.13 ENSMUST00000166192.7 |
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