Pregenerated sensors for COPG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030058Ensembl transcript IDs: ENSMUST00000049966.6, ENSMUST00000113607.10
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCAGCCATCCTCCTGTTTCTCCCAAATGCTGGGAGAACAAGTGTaGAGCACCAGGTCCAGCTGTGACTCTCAGTTCTCCAGGACACGG | + |
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Preference number: 1 (lower is better) Translates to: WQPSSCFSQMLGEQV*STRSSCDSQFSRTR Trigger: CCGTGTCCTGGAGAACTGAGAGTCACAGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGCATTTGGGAGAAACAGGAGGATGGCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR CCA 90 bp | AGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTCTCCCAAATGCTaGGAGAACAAGTGTGCAGCACCAGGTCCAGCTGTGACTCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: RQVQTGSHPPVSPKC*ENKCAAPGPAVTLS Trigger: ACTGAGAGTCACAGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGCATTTGGGAGAAACAGGAGGATGGCTGCCAGTTTGAACCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR CCA 90 bp | AGGTCAGGCTTTCCTTTAAAGCCTGGAGAGGCCTTCATAAAGGGATaGAATGAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: RSGFPLKPGEAFIKG*NEAERPGKSNCSVP Trigger: GGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTCATTCCATCCCTTTATGAAGGCCTCTCCAGGCTTTAAAGGAAAGCCTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR TCA 90 bp | CTCCCAAATGCTGGGAGAACAAGTGTGCAGCACCAGGTCCAGCTGTaGCTCTCAGTTCTCCAGGACACGGAGTATATATTCGTGACGTCT | + |
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Preference number: 1 (lower is better) Translates to: LPNAGRTSVQHQVQL*LSVLQDTEYIFVTS Trigger: AGACGTCACGAATATATACTCCGTGTCCTGGAGAACTGAGAGTCACAGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGCATTTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR GCA 90 bp | GGGATTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTaGATGTGCATACAGTATACAGGTGTGCATGAGGTTAGGCGGCAA | + |
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Preference number: 1 (lower is better) Translates to: GIRLKGAGLCSNVYM*MCIQYTGVHEVRRQ Trigger: TTGCCGCCTAACCTCATGCACACCTGTATACTGTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTCTTAACACAGTGGTCTaGGGAAGGGTTTCCACCGGC | + |
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Preference number: 2 (lower is better) Translates to: GGPEHEPAEAAVIQEIHALNTVV*GRVSTG Trigger: GCCGGTGGAAACCCTTCCCCAGACCACTGTGTTAAG...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTGTTTCTCCCAAATGCTGGGAGAACAAGTGTGCAGCACCAGGTCCAGCTGCAAGGCCTAGGAAGTaGGAAATAAGCAGACCATTC | + |
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Preference number: 2 (lower is better) Translates to: PPVSPKCWENKCAAPGPAARPRK*EISRPF Trigger: GAATGGTCTGCTTATTTCTCACTTCCTAGGCCTTGC...AGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGCATTTGGGAGAAACAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATACAGATGCCTGTAGATaGGTGGCTTACCAGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: LVHHCMPDQVHGGARTSHTDACR*VAYQTC Trigger: GCAGGTCTGGTAAGCCACTCATCTACAGGCATCTGT...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAATCAAGAAATACATGCTaGCTTATCATAGGGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: EAERPGKSNCSVPRRGMESRNTC*LIIGMR Trigger: TCTCATCCCTATGATAAGTCAGCATGTATTTCTTGA...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATATGCCTGTAGATGAGTaGCTTACCAGACCTGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LVHHCMPDQVHGGARTSHMPVDE*LTRPAS Trigger: GCTAGCAGGTCTGGTAAGCCACTCATCTACAGGCAT...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR GCA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAATCATTTGTCTCTCCTTaGAGGCATGGTGACAAAATC | + |
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Preference number: 2 (lower is better) Translates to: LSLALTVPRGYAHAPFGESFVSP*RHGDKI Trigger: GATTTTGTCACCATGCCTGCAAGGAGAGACAAATGA...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCCAGTTCTTCAAGTGTTTCCAACAGTTTAAACCACCTGATTTGAGTTTAGAGAAGTGGAGGCCCTaGGCACGAGCCTGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: EVQFFKCFQQFKPPDLSLEKWRP*ARACRS Trigger: GCTTCTGCAGGCTCGTGCTCAGGGCCTCCACTTCTC...TAAACTCAAATCAGGTGGTTTAAACTGTTGGAAACACTTGAAGAACTGGACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR CCA 90 bp | CTATGTAGCCCAGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTCTCCCAAATATGTCAAAAGGCTCTTaGCTGTACATGTTGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCSPGRFKLAAILLFLPNMSKGS*LYMLSL Trigger: CAGAGACAACATGTACAGCCAAGAGCCTTTTGACAT...ATTTGGGAGAAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCTACATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR-3UTR CCA 90 bp | CTATGTAGCCCAGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTCTCCCAAATATGAAAGCTCCATGCTaGTTGTATTGTCTAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LCSPGRFKLAAILLFLPNMKAPC*LYCLRR Trigger: CCTCCTTAGACAATACAACCAGCATGGAGCTTTCAT...ATTTGGGAGAAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCTACATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR-3UTR CCA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAATGTTTCTTAACACAGTaGTCTGGGGAAGGGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: GMVTKSTLAFLNDRMELKCFLTQ*SGEGFP Trigger: TGGAAACCCTTCCCCAGACCACTGTGTTAAGAAACA...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAAGTTAGGCGGCAACTATaGCAAAATGGTCCTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: EAERPGKSNCSVPRRGMEVRRQL*QNGPLL Trigger: AAGGAGAGGACCATTTTGCAATAGTTGCCGCCTAAC...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR CCA 72 bp | TGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTaGCTTCGACGTAGTGTTGGACAAGATAGGAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: WGRVSTGFTGKK*LRRSVGQDRSG Trigger: CCCACTCCTATCTTGTCCAACACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR GCA 72 bp | GTTCAAACTGGCAGCCATCCTCCTGTTTCTCCCAAATaGTGGGAGAACAAGTGTGCAGCACCAGGTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: VQTGSHPPVSPK*WENKCAAPGPA Trigger: AGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGCATTTGGGAGAAACAGGAGGATGGCTGCCAGTTTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTGGCTTCGACGTAGTGTaGGACAAGATAGGAGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GGPEHEPAEAAVIQEIHAGFDVV*DKIGVG Trigger: CCCCACTCCTATCTTGTCCAACACTACGTCGAAGCC...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR TCA 72 bp | GCTGGGAGAACAAGTGTGCAGCACCAGGTCCAGCTGTaGCTCTCAGTTCTCCAGGACACGGAGTATATATTC | + |
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Preference number: 3 (lower is better) Translates to: AGRTSVQHQVQL*LSVLQDTEYIF Trigger: GAATATATACTCCGTGTCCTGGAGAACTGAGAGTCACAGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR-3UTR CAA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGGAACATTTTATTCATTaGTCTCTCCTTGCAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: LALTVPRGYAHAPFGEGREHFIH*SLLAGM Trigger: CATGCCTGCAAGGAGAGACAAATGAATAAAATGTTC...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR CCA 72 bp | TGGACACCCATCCATCTACAGATGCCTGTAGATGAGTaGCTTACCAGACCTGCTAGCTGTTGTCATTCGGCT | + |
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Preference number: 3 (lower is better) Translates to: WTPIHLQMPVDE*LTRPASCCHSA Trigger: AGCCGAATGACAACAGCTAGCAGGTCTGGTAAGCCACTCATCTACAGGCATCTGTAGATGGATGGGTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR CCA 72 bp | TTTCCTTTAAAGCCTGGAGAGGCCTTCATAAAGGGATaGAATGAGGCAGAGAGGCCAGGCAAGAGCAACTGC | + |
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Preference number: 3 (lower is better) Translates to: FPLKPGEAFIKG*NEAERPGKSNC Trigger: GCAGTTGCTCTTGCCTGGCCTCTCTGCCTCATTCCATCCCTTTATGAAGGCCTCTCCAGGCTTTAAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTGTTTCTCCCAAATGCTGGGAGAACAAGTGTGCAGCACCAGGTCCAGCTTACTGGCTAATAGACTaGCTCATTAACTTCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PPVSPKCWENKCAAPGPAYWLID*LINFLH Trigger: GTGCAGGAAGTTAATGAGCAAGTCTATTAGCCAGTA...AGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGCATTTGGGAGAAACAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR TCA 72 bp | AATGAAGTTTATTTGAATGGAATGGCTTCCAGGCTATaGCCAGGCCTGGGAGTAGAAGGGGAGGGTATTAGG | + |
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Preference number: 3 (lower is better) Translates to: NEVYLNGMASRL*PGLGVEGEGIR Trigger: CCTAATACCCTCCCCTTCTACTCCCAGGCCTGGTCATAGCCTGGAAGCCATTCCATTCAAATAAACTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR GCA 72 bp | AGTATACAGGTGTGCATGAGGTTAGGCGGCAACTATTaGAAAATGGTCCTCTCCTTCTACCAAGTGGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: SIQVCMRLGGNY*KMVLSFYQVGS Trigger: ACTACCCACTTGGTAGAAGGAGAGGACCATTTTGCAATAGTTGCCGCCTAACCTCATGCACACCTGTATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| 3UTR CCA 72 bp | AGAAATAAGCAGACCATTCTAGAGGCTGGCATAGGGTaGGCTAAGAGGAAAGGGCACAGAACAGATGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: RNKQTILEAGIG*AKRKGHRTDVK Trigger: TTTGACATCTGTTCTGTGCCCTTTCCTCTTAGCCCACCCTATGCCAGCCTCTAGAATGGTCTGCTTATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| 3UTR CCA 72 bp | AAATCTGTATTGACTCTTGATTGTTTCTTAACACAGTaGTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: KSVLTLDCFLTQ*SGEGFPPASQG Trigger: TCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGACCACTGTGTTAAGAAACAATCAAGAGTCAATACAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGCGGTCTCGGACTCTGTaGGGGCCACTGGCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LALTVPRGYAHAPFGEGRRSRTL*GPLAQE Trigger: CTCCTGAGCCAGTGGCCCTCACAGAGTCCGAGACCG...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAACCTCAGTTGCTTCCGTaGTCCCCAGGTGCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: EAERPGKSNCSVPRRGMEPQLLP*SPGAPP Trigger: AGGGGGAGCACCTGGGGACCACGGAAGCAACTGAGG...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAATGCAGCCTGGCAGGTTaGCAATGGCTGAGGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: EAERPGKSNCSVPRRGMECSLAG*QWLRQL Trigger: AAGCTGCCTCAGCCATTGTCAACCTGCCAGGCTGCA...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR GCA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGCGGCTGTTTGACTGCTaGGGTGGCGGTGCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LALTVPRGYAHAPFGEGRRLFDC*GGGAFW Trigger: CCAGAAAGCACCGCCACCGCAGCAGTCAAACAGCCG...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGGCAGGCAGCTCTCGATaGAGTCAAACAGCGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LALTVPRGYAHAPFGEGRAGSSR*SQTAGC Trigger: ACAGCCCGCTGTTTGACTTCATCGAGAGCTGCCTGC...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGCGCACAAGGATGTCATaGCCACCCCGGAATACTCCA | + |
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Preference number: 4 (lower is better) Translates to: LALTVPRGYAHAPFGEGRRTRMS*PPRNTP Trigger: TGGAGTATTCCGGGGTGGTCATGACATCCTTGTGCG...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAACGGAGCTGGAGACACTaGGAACCTTGTCCACAATTG | + |
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Preference number: 4 (lower is better) Translates to: EAERPGKSNCSVPRRGMERSWRH*EPCPQL Trigger: CAATTGTGGACAAGGTTCCCAGTGTCTCCAGCTCCG...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CCA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGAGGGCACTGATGGCCTaGACAACCACCACCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: LALTVPRGYAHAPFGEGRRALMA*TTTTLN Trigger: GTTCAAGGTGGTGGTTGTCCAGGCCATCAGTGCCCT...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAATTTCGAGGATACTTCTaGCACAGGGCACTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: EAERPGKSNCSVPRRGMEFRGYF*HRALMA Trigger: GGCCATCAGTGCCCTGTGCCAGAAGTATCCTCGAAA...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGGCTCCATCTGCACTGTaGCATTCTCCAGAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LALTVPRGYAHAPFGEGRAPSAL*HSPESG Trigger: ACCAGACTCTGGAGAATGTCACAGTGCAGATGGAGC...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR GCA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGCCACTCGGATCATCATaGAGTAGGCAAAGGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: LALTVPRGYAHAPFGEGRPLGSS*SRQRGT Trigger: AGTCCCCCTTTGCCTACTGCATGATGATCCGAGTGG...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR GCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAATCAGTGGGCTCCATCTaGACTGTGACATTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: EAERPGKSNCSVPRRGMESVGSI*TVTFSR Trigger: TCTGGAGAATGTCACAGTGCAGATGGAGCCCACTGA...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CCA 90 bp | CTATGTAGCCCAGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTCTCCCAAATGGTGCTGGAGGGGGTTaGAGCCTCCACCAGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: LCSPGRFKLAAILLFLPNGAGGG*SLHQTP Trigger: AGGAGTCTGGTGGAGGCTCCAACCCCCTCCAGCACC...ATTTGGGAGAAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCTACATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| CDS-3UTR CCA 90 bp | GACATCTTGCTATGTAGCCCAGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTCCTCAGTTGCTTCCGTaGTCCCCAGGTGCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: DILLCSPGRFKLAAILLFPQLLP*SPGAPP Trigger: AGGGGGAGCACCTGGGGACCACGGAAGCAACTGAGG...AAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCTACATAGCAAGATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
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| CDS-3UTR CCA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAATGCATGCCACAGCTGTaGGGTCTTCAGTGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LSLALTVPRGYAHAPFGECMPQL*GLQWAE Trigger: CTCTGCCCACTGAAGACCCCACAGCTGTGGCATGCA...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAATGCAGGACATCTCCTTaGTGGTCAAATAGCACATGC | + |
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Preference number: 4 (lower is better) Translates to: EAERPGKSNCSVPRRGMECRTSP*WSNSTC Trigger: GCATGTGCTATTTGACCATCAAGGAGATGTCCTGCA...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | GTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTCAGGTTGACAATGGCTaGGGCAGCTTCATACACCAC | + |
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Preference number: 4 (lower is better) Translates to: VWGRVSTGFTGKKWLRRSQVDNG*GSFIHH Trigger: GTGGTGTATGAAGCTGCCTCAGCCATTGTCAACCTG...ACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTGCAGGCAGTCACCGCTaGAGGGTGCTTCATAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GGPEHEPAEAAVIQEIHAAGSHR*RVLHSH Trigger: GTGGCTATGAAGCACCCTTCAGCGGTGACTGCCTGC...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR TCA 90 bp | GTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTACTTCATCACACAGCTaGACGTGCATGCCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGRVSTGFTGKKWLRRSTSSHS*TCMPQL Trigger: CAGCTGTGGCATGCACGTTCAGCTGTGTGATGAAGT...ACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | ATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTTGAAGGTCAGGCTTTCCTTTGGTGCTGGAGGGGGTTaGAGCCTCCACCAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQSGRAKQDVALKVRLSFGAGGG*SLHQTP Trigger: AGGAGTCTGGTGGAGGCTCCAACCCCCTCCAGCACC...AAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAATCATTCTTCCGCACATaGTACAGAAGTCCTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAERPGKSNCSVPRRGMESFFRT*YRSPRA Trigger: TGCCCTAGGACTTCTGTACCATGTGCGGAAGAATGA...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | TTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGTTGGACAAGATAGTCTTGGGCCCCTCCTaGCCCAACAGGTGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPPASQGRSGFDVVLDKIVLGPS*PNRCRM Trigger: CATCCTGCACCTGTTGGGCCAGGAGGGGCCCAAGAC...TATCTTGTCCAACACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGCTCCTCTGAGCTTCTaGCTGTCACCTGCATCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLALTVPRGYAHAPFGEAPLSF*LSPASS Trigger: TGACGATGCAGGTGACAGCCAGAAGCTCAGAGGAGC...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | ATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTTGAAGGTCAGGCTTTCCTTTGAAAAGCTGGAGCACTaGCACAGCAGGGGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQSGRAKQDVALKVRLSFEKLEH*HSRGQL Trigger: GAGCTGGCCCCTGCTGTGTCAGTGCTCCAGCTTTTC...AAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GACATCTTGCTATGTAGCCCAGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTTCCGTGGTCCCCAGGTaGTCCCCCTGGTTTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DILLCSPGRFKLAAILLFSVVPR*SPWFMR Trigger: TCTCATAAACCAGGGGGAGCACCTGGGGACCACGGA...AAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCTACATAGCAAGATGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGTTTCTCCCAAATGCTGGGAGAACAAGTGTGCAGCACCAGGTCCAGCTAAAGAAAGCCTCAGTTaGTTCCGTGGTCCCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPVSPKCWENKCAAPGPAKESLS*FRGPQV Trigger: CACCTGGGGACCACGGAAGCAACTGAGGCTTTCTTT...AGCTGGACCTGGTGCTGCACACTTGTTCTCCCAGCATTTGGGAGAAACAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTTCTGAGCTCCAAACTTaGCCAGAGCACTTACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VWGRVSTGFTGKKWLRRSSELQT*PEHLLH Trigger: GTGCAGTAAGTGCTCTGGCCAAGTTTGGAGCTCAGA...ACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCATCTGGCACAGGGCACTaGTGGCCTGGACAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRASGTGH*WPGQPP Trigger: TGGTGGTTGTCCAGGCCATCAGTGCCCTGTGCCAGA...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | ATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTTGAAGGTCAGGCTTTCCTTTTACTGGCAGCTCCTCTaGGCTTCTGGCTGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQSGRAKQDVALKVRLSFYWQLL*ASGCHL Trigger: CAGGTGACAGCCAGAAGCTCAGAGGAGCTGCCAGTA...AAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGCGTTGAGAGCCTTCTaGTTCTGTTCCAGAACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLALTVPRGYAHAPFGEALRAF*FCSRTF Trigger: GAACGTTCTGGAACAGAAGCAGAAGGCTCTCAACGC...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGGAACTTCACAATATTaGCCACAGCCTCTTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGRVSTGFTGKKWLRRSGTSQY*PQPLRV Trigger: CACTCGAAGAGGCTGTGGGCAATATTGTGAAGTTCC...ACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | ATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTTGAAGGTCAGGCTTTCCTTTACTTGGAAGGGTTGTTaGTCTTGGGCCCCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQSGRAKQDVALKVRLSFTWKGC*SWAPPG Trigger: GCCAGGAGGGGCCCAAGACCAACAACCCTTCCAAGT...AAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAATCTCCAGACCAGGGATaGACACGGTCAGACCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLALTVPRGYAHAPFGESPDQG*TRSDHL Trigger: TAAATGGTCTGACCGTGTCCATCCCTGGTCTGGAGA...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | ATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTTGAAGGTCAGGCTTTCCTTTGGTGGCGGTGCTTTCTaGTCTCTGCTCTGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQSGRAKQDVALKVRLSFGGGAF*SLLCHR Trigger: CCTATGGCAGAGCAGAGACCAGAAAGCACCGCCACC...AAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGTTGGACAAGATACGTTCACCCAGCGCTTaGCCACATCGAAGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FPPASQGRSGFDVVLDKIRSPSA*PHRSCI Trigger: AATGCAGCTTCGATGTGGTCAAGCGCTGGGTGAACG...TATCTTGTCCAACACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGCTAAGAGGAAAGGGCACAGAACAGATGTCAAAAGGCTCTTGGCTGTACCCCTGCCCAAGACATaGCTGCTTGTCACAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: GWAKRKGHRTDVKRLLAVPLPKT*LLVTMM Trigger: CATCATTGTGACAAGCAGGCATGTCTTGGGCAGGGG...TACAGCCAAGAGCCTTTTGACATCTGTTCTGTGCCCTTTCCTCTTAGCCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR CCA 90 bp | GAGGTCCAGTTCTTCAAGTGTTTCCAACAGTTTAAACCACCTGATTTGAGTTTACTGGACGCCGCCTCCTaGGCCTCGTTCACCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EVQFFKCFQQFKPPDLSLLDAAS*ASFTQR Trigger: GCGCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCAG...TAAACTCAAATCAGGTGGTTTAAACTGTTGGAAACACTTGAAGAACTGGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCAAAGGGTTGTTGGTCTTaGGCCCCTCCTGGCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRAKGCWS*APPGPT Trigger: TGTTGGGCCAGGAGGGGCCCAAGACCAACAACCCTT...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | ACCATTCTAGAGGCTGGCATAGGGTGGGCTAAGAGGAAAGGGCACAGAACAGATATCTTGGTGAGGATGTaGGCACATTTCCGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: TILEAGIGWAKRKGHRTDILVRM*AHFRGL Trigger: CAATCCCCGGAAATGTGCTCACATCCTCACCAAGAT...ATCTGTTCTGTGCCCTTTCCTCTTAGCCCACCCTATGCCAGCCTCTAGAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATGGATGTAACCTGCGTTaGGAGCCTTCTGCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVHHCMPDQVHGGARTSHGCNLR*EPSASV Trigger: AACAGAAGCAGAAGGCTCTCAACGCAGGTTACATCC...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGTTGGACAAGATACCAGAGGCACAGACTTaGGGTCAAATGGCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPPASQGRSGFDVVLDKIPEAQT*GQMASL Trigger: CAGAGAAGCCATTTGACCTCAAGTCTGTGCCTCTGG...TATCTTGTCCAACACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | TTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTGCATGTGCATACTCCGTGGTCCCCAGGTaGTCCCCCTGGTTTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGLKVQASVLMCTCACAYSVVPR*SPWFMR Trigger: TCTCATAAACCAGGGGGAGCACCTGGGGACCACGGA...GTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | ATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTTGAAGGTCAGGCTTTCCTTTAAAGAAAGCCTCAGTTaGTTCCGTGGTCCCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQSGRAKQDVALKVRLSFKESLS*FRGPQV Trigger: CACCTGGGGACCACGGAAGCAACTGAGGCTTTCTTT...AAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | TTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGTTGGACAAGATAGCCCGAACTTCTTCATaGTCCAAGACCACACGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPPASQGRSGFDVVLDKIARTSS*SKTTRL Trigger: CAACCGTGTGGTCTTGGAGCATGAAGAAGTTCGGGC...TATCTTGTCCAACACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCAGTGCTTTCTGGTCTCTaGTCTGCCATAGGCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRAVLSGL*SAIGVV Trigger: CACCACGCCTATGGCAGAGCAGAGACCAGAAAGCAC...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCACGAGAGCACTTCGTATaGCTCAGTGGGCTCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRAREHFV*LSGLHL Trigger: CAGATGGAGCCCACTGAGGCATACGAAGTGCTCTCG...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | ACCATTCTAGAGGCTGGCATAGGGTGGGCTAAGAGGAAAGGGCACAGAACAGATGTGGGATCATTGGACTaGAAGAGCTTGGTCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TILEAGIGWAKRKGHRTDVGSLD*KSLVMA Trigger: TGCCATGACCAAGCTCTTCCAGTCCAATGATCCCAC...ATCTGTTCTGTGCCCTTTCCTCTTAGCCCACCCTATGCCAGCCTCTAGAATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGCTAAGAGGAAAGGGCACAGAACAGATGTCAAAAGGCTCTTGGCTGTAGGAGTGTGGGATCATTaGACTGGAAGAGCTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWAKRKGHRTDVKRLLAVGVWDH*TGRAWS Trigger: TGACCAAGCTCTTCCAGTCCAATGATCCCACACTCC...TACAGCCAAGAGCCTTTTGACATCTGTTCTGTGCCCTTTCCTCTTAGCCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR CCA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTCCTAGGGCATGGTACTaGACCATGATGTTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GGPEHEPAEAAVIQEIHAPRAWY*TMMLSL Trigger: CAGTGACAACATCATGGTCCAGTACCATGCCCTAGG...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCACTCTGTGAGGGCCACTaGCTCAGGAGAGGACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRALCEGH*LRRGLE Trigger: TTCAAGTCCTCTCCTGAGCCAGTGGCCCTCACAGAG...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCACTGTGGGGTCTTCAGTaGGCAGAGCCACTAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRALWGLQ*AEPLVC Trigger: ACACACTAGTGGCTCTGCCCACTGAAGACCCCACAG...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| 3UTR CAA 72 bp | AGAATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTaGAAGGTCAGGCTTTCCTTTAAAGCCTGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RIQSGRAKQDVA*KVRLSFKAWRG Trigger: GCCTCTCCAGGCTTTAAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | GACATCTTGCTATGTAGCCCAGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTTGCAGGACATCTCCTTaGTGGTCAAATAGCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: DILLCSPGRFKLAAILLFCRTSP*WSNSTC Trigger: GCATGTGCTATTTGACCATCAAGGAGATGTCCTGCA...AAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCTACATAGCAAGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATCTGAGATCTCCGACATaGAGGAGGAAATCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVHHCMPDQVHGGARTSHLRSPT*RRKSAS Trigger: TGAAGCAGATTTCCTCCTTCATGTCGGAGATCTCAG...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCAGAACTCGCACAGGTGTaGCAATCCTGTCTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRAELAQV*QSCLLA Trigger: AGCAAGGAGACAGGATTGTCACACCTGTGCGAGTTC...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATTTCTGGCACTTTGTCTaGCCTCTCACAAGGATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVHHCMPDQVHGGARTSHFWHFV*PLTRMH Trigger: ATGCATCCTTGTGAGAGGTCAGACAAAGTGCCAGAA...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAATGAAGGAGGAAATCTaGTTCATAAGGCGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLALTVPRGYAHAPFGEMKEEI*FIRRSM Trigger: CATTGACCGCCTTATGAAGCAGATTTCCTCCTTCAT...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTGACCTCTCACAAGGATaGATTCCCAGGAACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGPEHEPAEAAVIQEIHADLSQG*IPRNFT Trigger: TGTGAAGTTCCTGGGAATGCATCCTTGTGAGAGGTC...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | TTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGTTGGACAAGATAGGAGTGTGGGATCATTaGACTGGAAGAGCTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPPASQGRSGFDVVLDKIGVWDH*TGRAWS Trigger: TGACCAAGCTCTTCCAGTCCAATGATCCCACACTCC...TATCTTGTCCAACACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCACCTCTAGTTGCTTGCTaGCCACTCGGATCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRAPLVAC*PLGSSC Trigger: GCATGATGATCCGAGTGGCCAGCAAGCAACTAGAGG...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCAGAGCTACAGAAAAGCTaGAGCACTGACACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRAELQKS*STDTAG Trigger: CCCTGCTGTGTCAGTGCTCCAGCTTTTCTGTAGCTC...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | ATACAGTCAGGAAGGGCTAAGCAGGATGTGGCCTTGAAGGTCAGGCTTTCCTTTCACCTTGAACTCATCTaGGATCTCCGACATGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQSGRAKQDVALKVRLSFHLELI*DLRHEG Trigger: TCCTTCATGTCGGAGATCTCAGATGAGTTCAAGGTG...AAAGGAAAGCCTGACCTTCAAGGCCACATCCTGCTTAGCCCTTCCTGACTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTAACTGGAACACCAAGTaGTCAGAGAAGGTGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGPEHEPAEAAVIQEIHANWNTK*SEKVCL Trigger: CAAACACACCTTCTCTGATCACTTGGTGTTCCAGTT...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCCCAAAAGGAATGCAGATACTGTTTTTCCCACTCATAGACCCAGAGCACCAGAGTCTGGTCATTaGGGGTGTTTGTGCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQPKRNADTVFPTHRPRAPESGH*GCLCSQ Trigger: TTGACTGCACAAACACCCTCAATGACCAGACTCTGG...TGCTCTGGGTCTATGAGTGGGAAAAACAGTATCTGCATTCCTTTTGGGCTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GTGAGAAATAAGCAGACCATTCTAGAGGCTGGCATAGGGTGGGCTAAGAGGAAATGGTCAAATAGCACATaGGGCGGAGTGTGGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRNKQTILEAGIGWAKRKWSNST*GGVWDH Trigger: ATGATCCCACACTCCGCCGCATGTGCTATTTGACCA...TTTCCTCTTAGCCCACCCTATGCCAGCCTCTAGAATGGTCTGCTTATTTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATTTCATGAGCACAGCATaGTTTCGAGGATACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVHHCMPDQVHGGARTSHFMSTA*FRGYFW Trigger: CCAGAAGTATCCTCGAAAGCATGCTGTGCTCATGAA...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATAACCTCATCCCAGGCTaGCTCAAAGTTCACTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVHHCMPDQVHGGARTSHNLIPG*LKVHFH Trigger: ATGAAAGTGAACTTTGAGGCAGCCTGGGATGAGGTT...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | TTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTGCATGTGCATACGCTAGCAGCAGCGTGTaGGTGTTCTTGTTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FGLKVQASVLMCTCACAYASSSV*VFLFSG Trigger: GCCAGAAAACAAGAACACCCACACGCTGCTGCTAGC...GTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | TTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTGCATGTGCATACATCTTGGTGAGGATGTaGGCACATTTCCGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: FGLKVQASVLMCTCACAYILVRM*AHFRGL Trigger: CAATCCCCGGAAATGTGCTCACATCCTCACCAAGAT...GTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAAGCATGGTGCTGTCAGTaGTCTGGCAGAGGGCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: GMVTKSTLAFLNDRMELKAWCCQ*SGRGHG Trigger: TCCGTGCCCTCTGCCAGATCACTGACAGCACCATGC...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | TTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTGCATGTGCATACCTTCTGGCTGTCACCTaGATCGTCACTGTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FGLKVQASVLMCTCACAYLLAVT*IVTVSK Trigger: TTTGGACACAGTGACGATGCAGGTGACAGCCAGAAG...GTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | TTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTGCATGTGCATACAACATCTCTTCGTTCTaGGCTCCAAACTTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGLKVQASVLMCTCACAYNISSF*APNLAR Trigger: TCTGGCCAAGTTTGGAGCTCAGAACGAAGAGATGTT...GTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGTTGGACAAGATAATGACTTTTTGGATGTaGTCAGCCACAGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPPASQGRSGFDVVLDKIMTFWM*SATVTS Trigger: GGAAGTTACTGTGGCTGATCACATCCAAAAAGTCAT...TATCTTGTCCAACACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTAACCTTGTCCACAATTaGTTGTTTCATGTAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGPEHEPAEAAVIQEIHANLVHN*LFHVAF Trigger: GAACGCTACATGAAACAAGCAATTGTGGACAAGGTT...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAAAAGTGCAGCCTTGGGTaGGCTACAGAAAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMVTKSTLAFLNDRMELKKCSLG*ATEKLE Trigger: CTCCAGCTTTTCTGTAGCTCACCCAAGGCTGCACTT...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | GAGGTCCAGTTCTTCAAGTGTTTCCAACAGTTTAAACCACCTGATTTGAGTTTAGGACAACCACCACCTTaGACTCATCTGAGATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EVQFFKCFQQFKPPDLSLGQPPP*THLRSP Trigger: CGGAGATCTCAGATGAGTTCAAGGTGGTGGTTGTCC...TAAACTCAAATCAGGTGGTTTAAACTGTTGGAAACACTTGAAGAACTGGACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAAACTCGCAGTCCTCAATaGACTCGCACAGGTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GMVTKSTLAFLNDRMELKTRSPQ*TRTGVT Trigger: TGTCACACCTGTGCGAGTTCATTGAGGACTGCGAGT...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAACCACGGATGCCAAGATaGTATCTACTGGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GMVTKSTLAFLNDRMELKPRMPR*YLLAAP Trigger: AGGAGCTGCCAGTAGATATCATCTTGGCATCCGTGG...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAATCGAGTGTGTACTGCTaGAGGGCTTTCTCCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GMVTKSTLAFLNDRMELKSSVYC*RAFSRP Trigger: TGGTCTGGAGAAAGCCCTGCAGCAGTACACACTCGA...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGAACATTTTATTCATTTGTCTCTCCTTGCAGGCATGGTGACAAAATCTGGCACCGCTGCTAGCTaGTCTTGGAAAATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSEHFIHLSLLAGMVTKSGTAAS*SWKISC Trigger: GCAGGAGATTTTCCAAGAGCAGCTAGCAGCGGTGCC...AGATTTTGTCACCATGCCTGCAAGGAGAGACAAATGAATAAAATGTTCAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR GCA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAATACACCACCATCTCATaGTTGTTACGCAGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMVTKSTLAFLNDRMELKYTTIS*LLRRQL Trigger: GAGCTGCCTGCGTAACAAGCATGAGATGGTGGTGTA...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGAACATTTTATTCATTTGTCTCTCCTTGCAGGCATGGTGACAAAATCTGCTGCTAGCTGCTCTTaGAAAATCTCCTGCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSEHFIHLSLLAGMVTKSAASCS*KISCRV Trigger: CACACGGCAGGAGATTTTCCAAGAGCAGCTAGCAGC...AGATTTTGTCACCATGCCTGCAAGGAGAGACAAATGAATAAAATGTTCAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR TCA 90 bp | TTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTGCATGTGCATACCAAAGTTCACTTTCATaGCTTTTTGGATGTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGLKVQASVLMCTCACAYQSSLS*LFGCDQ Trigger: CTGATCACATCCAAAAAGTCATGAAAGTGAACTTTG...GTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| 3UTR CAA 72 bp | TATCTAAAGACTTATGAAAGCTCCATGCTGGTTGTATaGTCTAAGGAGGAAGAAGAAAGGCAAGGCCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLKTYESSMLVV*SKEEEERQGLG Trigger: TCCTAGGCCTTGCCTTTCTTCTTCCTCCTTAGACAATACAACCAGCATGGAGCTTTCATAAGTCTTTAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS TCA 90 bp | TGTTGTCACTGGACGCCGCCTCCTGGGCCTCGTTCACCCAGCGCTTaGCCACATCGAAGCTGCATTTCAGCAGGTGCAGGGAAGACACGA | + |
|
Preference number: 5 (lower is better) Translates to: CCHWTPPPGPRSPSA*PHRSCISAGAGKTR Trigger: TCGTGTCTTCCCTGCACCTGCTGAAATGCAGCTTCGATGTGGTCAAGCGCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCAGTGACAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | AATCTCCTGCCGTGTGGCTGCTACCTTCTCCGGCTGTTTGACTGCTaGGGTGGCGGTGCTTTCTGGTCTCTGCTCTGCCATAGGCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLLPCGCYLLRLFDC*GGGAFWSLLCHRRG Trigger: ACCACGCCTATGGCAGAGCAGAGACCAGAAAGCACCGCCACCGCAGCAGTCAAACAGCCGGAGAAGGTAGCAGCCACACGGCAGGAGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | CCCTGGAACTCAGGCACCGCTGCTAGCTGCTCTTGGAAAATCTCCTaGCGTGTGGCTGCTACCTTCTCCGGCTGTTTGACTGCTGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PWNSGTAASCSWKIS*RVAATFSGCLTAAV Trigger: CACCGCAGCAGTCAAACAGCCGGAGAAGGTAGCAGCCACACGGCAGGAGATTTTCCAAGAGCAGCTAGCAGCGGTGCCTGAGTTCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAAGGTGCTGGAGGGGGTaGGAGCCTCCACCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLALTVPRGYAHAPFGERCWRG*EPPPDS Trigger: GGAGTCTGGTGGAGGCTCCAACCCCCTCCAGCACCT...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTGAAGGGTTGTTGGTCTaGGGCCCCTCCTGGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VWGRVSTGFTGKKWLRRSEGLLV*GPSWPN Trigger: GTTGGGCCAGGAGGGGCCCAAGACCAACAACCCTTC...ACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS TCA 90 bp | TCTTCCGCACATGGTACAGAAGTCCTAGGGCATGGTACTGGACCATaGTGTTGTCACTGGACGCCGCCTCCTGGGCCTCGTTCACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSAHGTEVLGHGTGP*CCHWTPPPGPRSPS Trigger: GCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCAGTGACAACATCATGGTCCAGTACCATGCCCTAGGACTTCTGTACCATGTGCGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | GAAAATCTCCTGCCGTGTGGCTGCTACCTTCTCCGGCTGTTTGACTaGTGCGGTGGCGGTGCTTTCTGGTCTCTGCTCTGCCATAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ENLLPCGCYLLRLFD*CGGGAFWSLLCHRR Trigger: ACGCCTATGGCAGAGCAGAGACCAGAAAGCACCGCCACCGCAGCAGTCAAACAGCCGGAGAAGGTAGCAGCCACACGGCAGGAGATTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 90 bp | AGGGCATGGTACTGGACCATGATGTTGTCACTGGACGCCGCCTCCTaGGCCTCGTTCACCCAGCGCTTGACCACATCGAAGCTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAWYWTMMLSLDAAS*ASFTQRLTTSKLHF Trigger: GAAATGCAGCTTCGATGTGGTCAAGCGCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCAGTGACAACATCATGGTCCAGTACCATGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 90 bp | AGGGCCACTGGCTCAGGAGAGGACTTGAAGAGAGGCCCTAGTCCCTaGAACTCAGGCACCGCTGCTAGCTGCTCTTGGAAAATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RATGSGEDLKRGPSP*NSGTAASCSWKISC Trigger: GCAGGAGATTTTCCAAGAGCAGCTAGCAGCGGTGCCTGAGTTCCAGGGACTAGGGCCTCTCTTCAAGTCCTCTCCTGAGCCAGTGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAAACCACCATCTCATGCTaGTTACGCAGGCAGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EAERPGKSNCSVPRRGMETTISC*LRRQLS Trigger: CGAGAGCTGCCTGCGTAACAAGCATGAGATGGTGGT...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 90 bp | ATAAAGCGAATGTACTTGGAAGGGTTGTTGGTCTTGGGCCCCTCCTaGCCCAACAGGTGCAGGATGCGGGTGGCCAGCACAGTGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: IKRMYLEGLLVLGPS*PNRCRMRVASTVNS Trigger: CGAGTTCACTGTGCTGGCCACCCGCATCCTGCACCTGTTGGGCCAGGAGGGGCCCAAGACCAACAACCCTTCCAAGTACATTCGCTTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTTACTGGACCATGATGTaGTCACTGGACGCCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VWGRVSTGFTGKKWLRRSYWTMM*SLDAAS Trigger: GGAGGCGGCGTCCAGTGACAACATCATGGTCCAGTA...ACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS TCA 90 bp | AGGCGTGGTGGCCAGAGGCACAGACTTGAGGTCAAATGGCTTCTCTaGTGGTTCGAGTGTGTACTGCTGCAGGGCTTTCTCCAGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRGGQRHRLEVKWLL*WFECVLLQGFLQTR Trigger: CCTGGTCTGGAGAAAGCCCTGCAGCAGTACACACTCGAACCATCAGAGAAGCCATTTGACCTCAAGTCTGTGCCTCTGGCCACCACGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GAAGTGAGAAATAAGCAGACCATTCTAGAGGCTGGCATAGGGTGGGCTAAGAGGAGGTGCTGGAGGGGGTaGGAGCCTCCACCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVRNKQTILEAGIGWAKRRCWRG*EPPPDS Trigger: GGAGTCTGGTGGAGGCTCCAACCCCCTCCAGCACCT...CCTCTTAGCCCACCCTATGCCAGCCTCTAGAATGGTCTGCTTATTTCTCACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR CAA 90 bp | TTAGTTCACCACTGCATGCCTGACCAAGTACATGGTGGAGCCAGGACCAGTCATCTCTCGCTCCCTGTCTaGAGCAGGGTGGTGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVHHCMPDQVHGGARTSHLSLPV*SRVVMA Trigger: GGCCATCACCACCCTGCTCAAGACAGGGAGCGAGAG...ATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGGCATGCAGTGGTGAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS TCA 90 bp | GTCACTGTGTCCAAAAGCAGAAGCCGAGAACGCACAAGGATGTCATaGCCACCCCGGAATACTCCAGCTAGCAGCAGCGTGTGGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTVSKSRSRERTRMS*PPRNTPASSSVWVF Trigger: GAACACCCACACGCTGCTGCTAGCTGGAGTATTCCGGGGTGGTCATGACATCCTTGTGCGTTCTCGGCTTCTGCTTTTGGACACAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAATCAGAGAAGGTGTGTTaGGTGCAACGGATGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: EAERPGKSNCSVPRRGMESEKVC*VQRMTY Trigger: GTATGTCATCCGTTGCACCAAACACACCTTCTCTGA...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGAGAGGCCAGGCAAGAGCAACTGCTCAGTCCCCAGGAGAGGGATGGAAAGCGTGTGGGTGTTCTaGTTTTCTGGCACTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EAERPGKSNCSVPRRGMESVWVF*FSGTLS Trigger: AGACAAAGTGCCAGAAAACAAGAACACCCACACGCT...TTCCATCCCTCTCCTGGGGACTGAGCAGTTGCTCTTGCCTGGCCTCTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 90 bp | AATAGCACATGCGGCGGAGTGTGGGATCATTGGACTGGAAGAGCTTaGTCATGGCAAAGAAAGCCTCAGTTGCTTCCGTGGTCCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSTCGGVWDHWTGRA*SWQRKPQLLPWSPG Trigger: ACCTGGGGACCACGGAAGCAACTGAGGCTTTCTTTGCCATGACCAAGCTCTTCCAGTCCAATGATCCCACACTCCGCCGCATGTGCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049966.6 ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | TTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGGGAGGTCCCAGTCATGTCTTTaGTCAGGCTGCTTGTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LALTVPRGYAHAPFGEGRSQSCL*SGCLSQ Trigger: TTGTGACAAGCAGCCTGACAAAAGACATGACTGGGA...CCTCCCTTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | CTAAGCTTGGCACTGACAGTCCCGAGGGGCTATGCACACGCTCCATTTGGTGAAGCCAGAGGCACAGACTaGAGGTCAAATGGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLALTVPRGYAHAPFGEARGTD*RSNGFS Trigger: AGAGAAGCCATTTGACCTCAAGTCTGTGCCTCTGGC...TTCACCAAATGGAGCGTGTGCATAGCCCCTCGGGACTGTCAGTGCCAAGCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS TCA 90 bp | CTTCATACACCACCATCTCATGCTTGTTACGCAGGCAGCTCTCGATaGAGTCAAACAGCGGGCTGTCACGGCTGCCGTCTTCTTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LHTPPSHACYAGSSR*SQTAGCHGCRLLPL Trigger: TAGAGGAAGAAGACGGCAGCCGTGACAGCCCGCTGTTTGACTTCATCGAGAGCTGCCTGCGTAACAAGCATGAGATGGTGGTGTATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | CCCTCTTCCCTTAGCATGGTGAACAGGAAGTTCATGAGCACAGCATaGTTTCGAGGATACTTCTGGCACAGGGCACTGATGGCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PSSLSMVNRKFMSTA*FRGYFWHRALMAWT Trigger: TGTCCAGGCCATCAGTGCCCTGTGCCAGAAGTATCCTCGAAAGCATGCTGTGCTCATGAACTTCCTGTTCACCATGCTAAGGGAAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | ACAGACTTGAGGTCAAATGGCTTCTCTGATGGTTCGAGTGTGTACTaGTGCAGGGCTTTCTCCAGACCAGGGATGGACACGGTCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: TDLRSNGFSDGSSVY*CRAFSRPGMDTVRP Trigger: TGGTCTGACCGTGTCCATCCCTGGTCTGGAGAAAGCCCTGCAGCAGTACACACTCGAACCATCAGAGAAGCCATTTGACCTCAAGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTTCGTTCACCCAGCGCTaGACCACATCGAAGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGPEHEPAEAAVIQEIHASFTQR*TTSKLH Trigger: ATGCAGCTTCGATGTGGTCAAGCGCTGGGTGAACGA...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTATGTACTTGGAAGGGTaGTTGGTCTTGGGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGPEHEPAEAAVIQEIHAMYLEG*LVLGPS Trigger: GGAGGGGCCCAAGACCAACAACCCTTCCAAGTACAT...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | GACTTGAGGTCAAATGGCTTCTCTGATGGTTCGAGTGTGTACTGCTaGAGGGCTTTCTCCAGACCAGGGATGGACACGGTCAGACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: DLRSNGFSDGSSVYC*RAFSRPGMDTVRPF Trigger: AAATGGTCTGACCGTGTCCATCCCTGGTCTGGAGAAAGCCCTGCAGCAGTACACACTCGAACCATCAGAGAAGCCATTTGACCTCAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | AAGATGATATCTACTGGCAGCTCCTCTGAGCTTCTGGCTGTCACCTaGATCGTCACTGTGTCCAAAAGCAGAAGCCGAGAACGCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMISTGSSSELLAVT*IVTVSKSRSRERTR Trigger: CCTTGTGCGTTCTCGGCTTCTGCTTTTGGACACAGTGACGATGCAGGTGACAGCCAGAAGCTCAGAGGAGCTGCCAGTAGATATCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 90 bp | ATTTCAGCAGGTGCAGGGAAGACACGAGGGCGGAGCTGGAGACACTaGGAACCTTGTCCACAATTGCTTGTTTCATGTAGCGTTCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: ISAGAGKTRGRSWRH*EPCPQLLVSCSVQQ Trigger: CTGTTGAACGCTACATGAAACAAGCAATTGTGGACAAGGTTCCCAGTGTCTCCAGCTCCGCCCTCGTGTCTTCCCTGCACCTGCTGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGAAGGGTTTCCACCGGCTTCACAGGGAAGAAGTGGCTTCGACGTAGTTTGTTTTCTGGCACTTaGTCTGACCTCTCACAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VWGRVSTGFTGKKWLRRSLFSGT*SDLSQG Trigger: TCCTTGTGAGAGGTCAGACAAAGTGCCAGAAAACAA...ACTACGTCGAAGCCACTTCTTCCCTGTGAAGCCGGTGGAAACCCTTCCCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS TCA 90 bp | CACCTCTTCAGCAACACCAAGATACTAGGCAACATCTCTTCGTTCTaGGCTCCAAACTTGGCCAGAGCACTTACTGCACCTGCCCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: HLFSNTKILGNISSF*APNLARALTAPART Trigger: AGTTCGGGCAGGTGCAGTAAGTGCTCTGGCCAAGTTTGGAGCTCAGAACGAAGAGATGTTGCCTAGTATCTTGGTGTTGCTGAAGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 90 bp | ATCATTGGACTGGAAGAGCTTGGTCATGGCAAAGAAAGCCTCAGTTaGTTCCGTGGTCCCCAGGTGCTCCCCCTGGTTTATGAGATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IIGLEELGHGKESLS*FRGPQVLPLVYEIK Trigger: CTTTATCTCATAAACCAGGGGGAGCACCTGGGGACCACGGAAGCAACTGAGGCTTTCTTTGCCATGACCAAGCTCTTCCAGTCCAATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049966.6 ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GACATCTTGCTATGTAGCCCAGGCAGGTTCAAACTGGCAGCCATCCTCCTGTTTTTGGACTGGAAGAGCTaGGTCATGGCAAAGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DILLCSPGRFKLAAILLFLDWKS*VMAKKA Trigger: GGCTTTCTTTGCCATGACCAAGCTCTTCCAGTCCAA...AAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCTACATAGCAAGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTCTGTCTCTCACTTCATaGTCGTCGTCCATCACACAC | + |
|
Preference number: 5 (lower is better) Translates to: GGPEHEPAEAAVIQEIHALSLTS*SSSITH Trigger: GTGTGTGATGGACGACGACAATGAAGTGAGAGACAG...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTTCCAGAGTCTGGTCATaGAGGGTGTTTGTGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGPEHEPAEAAVIQEIHASRVWS*RVFVQS Trigger: TGACTGCACAAACACCCTCAATGACCAGACTCTGGA...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTGAGACACTGGGAACCTaGTCCACAATTGCTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGPEHEPAEAAVIQEIHAETLGT*STIACF Trigger: GAAACAAGCAATTGTGGACAAGGTTCCCAGTGTCTC...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCCTGAGCACGAGCCTGCAGAAGCAGCAGTTATTCAAGAAATACATGCTAGGAACTTCACAATATaGCCCACAGCCTCTTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGPEHEPAEAAVIQEIHARNFTI*PTASSS Trigger: ACTCGAAGAGGCTGTGGGCAATATTGTGAAGTTCCT...AGCATGTATTTCTTGAATAACTGCTGCTTCTGCAGGCTCGTGCTCAGGGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 90 bp | TTACTGATCATCTTACTCACGGCCAGTCGGTCATTCTTCCGCACATaGTACAGAAGTCCTAGGGCATGGTACTGGACCATGATGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLIILLTASRSFFRT*YRSPRAWYWTMMLS Trigger: TGACAACATCATGGTCCAGTACCATGCCCTAGGACTTCTGTACCATGTGCGGAAGAATGACCGACTGGCCGTGAGTAAGATGATCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GAAGTGAGAAATAAGCAGACCATTCTAGAGGCTGGCATAGGGTGGGCTAAGAGGGCACATTTCCGGGGATaGATGGGAGTTTCGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EVRNKQTILEAGIGWAKRAHFRG*MGVSLK Trigger: CTTTAACGAAACTCCCATCAATCCCCGGAAATGTGC...CCTCTTAGCCCACCCTATGCCAGCCTCTAGAATGGTCTGCTTATTTCTCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049966.6 |
||
| CDS-3UTR CAA 90 bp | GAGGTCCAGTTCTTCAAGTGTTTCCAACAGTTTAAACCACCTGATTTGAGTTTACTGCAGCCTGGCAGGTaGACAATGGCTGAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVQFFKCFQQFKPPDLSLLQPGR*TMAEAA Trigger: AGCTGCCTCAGCCATTGTCAACCTGCCAGGCTGCAG...TAAACTCAAATCAGGTGGTTTAAACTGTTGGAAACACTTGAAGAACTGGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAAGGCTCAGGAGAGGACTaGAAGAGAGGCCCTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GMVTKSTLAFLNDRMELKGSGED*KRGPSP Trigger: GGGACTAGGGCCTCTCTTCAAGTCCTCTCCTGAGCC...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS TCA 90 bp | TCATCCCAGGCTGCCTCAAAGTTCACTTTCATGACTTTTTGGATGTaGTCAGCCACAGTAACTTCCAGATCCTCCAGCACATACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSQAASKFTFMTFWM*SATVTSRSSSTYSS Trigger: GGATGAGTATGTGCTGGAGGATCTGGAAGTTACTGTGGCTGATCACATCCAAAAAGTCATGAAAGTGAACTTTGAGGCAGCCTGGGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | TTCGGCTTAAAGGTGCAGGCCTCTGTTCTAATGTGTACATGTGCATGTGCATACGCACATTTCCGGGGATaGATGGGAGTTTCGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FGLKVQASVLMCTCACAYAHFRG*MGVSLK Trigger: CTTTAACGAAACTCCCATCAATCCCCGGAAATGTGC...GTATGCACATGCACATGTACACATTAGAACAGAGGCCTGCACCTTTAAGCCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CAA 90 bp | GAGGTCCAGTTCTTCAAGTGTTTCCAACAGTTTAAACCACCTGATTTGAGTTTATACTTGGAAGGGTTGTaGGTCTTGGGCCCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVQFFKCFQQFKPPDLSLYLEGL*VLGPSW Trigger: CCAGGAGGGGCCCAAGACCAACAACCCTTCCAAGTA...TAAACTCAAATCAGGTGGTTTAAACTGTTGGAAACACTTGAAGAACTGGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | GGCATGGTGACAAAATCTACCCTAGCATTCCTGAATGATAGGATGGAATTAAAATCTTCCTCTAGTTGCTaGCTGGCCACTCGGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: GMVTKSTLAFLNDRMELKSSSSC*LATRII Trigger: GATGATCCGAGTGGCCAGCAAGCAACTAGAGGAAGA...TTTTAATTCCATCCTATCATTCAGGAATGCTAGGGTAGATTTTGTCACCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CAA 90 bp | AAGTCTGAACATTTTATTCATTTGTCTCTCCTTGCAGGCATGGTGACAAAATCTTGGACAACCACCACCTaGAACTCATCTGAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSEHFIHLSLLAGMVTKSWTTTT*NSSEIS Trigger: GGAGATCTCAGATGAGTTCAAGGTGGTGGTTGTCCA...AGATTTTGTCACCATGCCTGCAAGGAGAGACAAATGAATAAAATGTTCAGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS-3UTR CAA 90 bp | AAGTCTGAACATTTTATTCATTTGTCTCTCCTTGCAGGCATGGTGACAAAATCTGAACCTTGTCCACAATaGCTTGTTTCATGTAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: KSEHFIHLSLLAGMVTKSEPCPQ*LVSCSV Trigger: AACGCTACATGAAACAAGCAATTGTGGACAAGGTTC...AGATTTTGTCACCATGCCTGCAAGGAGAGACAAATGAATAAAATGTTCAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS-3UTR CAA 90 bp | AAGTCTGAACATTTTATTCATTTGTCTCTCCTTGCAGGCATGGTGACAAAATCTCACTTTCATGACTTTTaGGATGTGATCAGCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: KSEHFIHLSLLAGMVTKSHFHDF*DVISHS Trigger: ACTGTGGCTGATCACATCCAAAAAGTCATGAAAGTG...AGATTTTGTCACCATGCCTGCAAGGAGAGACAAATGAATAAAATGTTCAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS GCA 72 bp | GGGTTGTTGGTCTTGGGCCCCTCCTGGCCCAACAGGTaGAGGATGCGGGTGGCCAGCACAGTGAACTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLLVLGPSWPNR*RMRVASTVNSQ Trigger: CTGCGAGTTCACTGTGCTGGCCACCCGCATCCTGCACCTGTTGGGCCAGGAGGGGCCCAAGACCAACAACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS TCA 72 bp | TGGACGCCGCCTCCTGGGCCTCGTTCACCCAGCGCTTaGCCACATCGAAGCTGCATTTCAGCAGGTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WTPPPGPRSPSA*PHRSCISAGAG Trigger: CCCTGCACCTGCTGAAATGCAGCTTCGATGTGGTCAAGCGCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CAA 72 bp | CTGGACGCCGCCTCCTGGGCCTCGTTCACCCAGCGCTaGACCACATCGAAGCTGCATTTCAGCAGGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDAASWASFTQR*TTSKLHFSRCR Trigger: CCTGCACCTGCTGAAATGCAGCTTCGATGTGGTCAAGCGCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS GCA 72 bp | CTGCCGTGTGGCTGCTACCTTCTCCGGCTGTTTGACTaGTGCGGTGGCGGTGCTTTCTGGTCTCTGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPCGCYLLRLFD*CGGGAFWSLLC Trigger: GCAGAGCAGAGACCAGAAAGCACCGCCACCGCAGCAGTCAAACAGCCGGAGAAGGTAGCAGCCACACGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CAA 90 bp | TACTCGGTCTCGGACTCTGTGAGGGCCACTGGCTCAGGAGAGGACTaGAAGAGAGGCCCTAGTCCCTGGAACTCAGGCACCGCTGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: YSVSDSVRATGSGED*KRGPSPWNSGTAAS Trigger: GCTAGCAGCGGTGCCTGAGTTCCAGGGACTAGGGCCTCTCTTCAAGTCCTCTCCTGAGCCAGTGGCCCTCACAGAGTCCGAGACCGAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS GCA 72 bp | TGTTTGACTGCTGCGGTGGCGGTGCTTTCTGGTCTCTaGTCTGCCATAGGCGTGGTGGCCAGAGGCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CLTAAVAVLSGL*SAIGVVARGTD Trigger: GTCTGTGCCTCTGGCCACCACGCCTATGGCAGAGCAGAGACCAGAAAGCACCGCCACCGCAGCAGTCAAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS GCA 72 bp | CCGTGTGGCTGCTACCTTCTCCGGCTGTTTGACTGCTaGGGTGGCGGTGCTTTCTGGTCTCTGCTCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PCGCYLLRLFDC*GGGAFWSLLCH Trigger: ATGGCAGAGCAGAGACCAGAAAGCACCGCCACCGCAGCAGTCAAACAGCCGGAGAAGGTAGCAGCCACACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CCA 72 bp | ATGTACTTGGAAGGGTTGTTGGTCTTGGGCCCCTCCTaGCCCAACAGGTGCAGGATGCGGGTGGCCAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: MYLEGLLVLGPS*PNRCRMRVAST Trigger: TGTGCTGGCCACCCGCATCCTGCACCTGTTGGGCCAGGAGGGGCCCAAGACCAACAACCCTTCCAAGTACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CAA 72 bp | TCGGACTCTGTGAGGGCCACTGGCTCAGGAGAGGACTaGAAGAGAGGCCCTAGTCCCTGGAACTCAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SDSVRATGSGED*KRGPSPWNSGT Trigger: GGTGCCTGAGTTCCAGGGACTAGGGCCTCTCTTCAAGTCCTCTCCTGAGCCAGTGGCCCTCACAGAGTCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CAA 90 bp | ATGTTGTCACTGGACGCCGCCTCCTGGGCCTCGTTCACCCAGCGCTaGACCACATCGAAGCTGCATTTCAGCAGGTGCAGGGAAGACACG | + |
|
Preference number: 6 (lower is better) Translates to: MLSLDAASWASFTQR*TTSKLHFSRCREDT Trigger: CGTGTCTTCCCTGCACCTGCTGAAATGCAGCTTCGATGTGGTCAAGCGCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCAGTGACAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 72 bp | TACTGGACCATGATGTTGTCACTGGACGCCGCCTCCTaGGCCTCGTTCACCCAGCGCTTGACCACATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YWTMMLSLDAAS*ASFTQRLTTSK Trigger: CTTCGATGTGGTCAAGCGCTGGGTGAACGAGGCCCAGGAGGCGGCGTCCAGTGACAACATCATGGTCCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CAA 90 bp | GAGCTACAGAAAAGCTGGAGCACTGACACAGCAGGGGCCAGCTCTTaGGCACTGCAGCCTGGCAGGTTGACAATGGCTGAGGCAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ELQKSWSTDTAGASS*ALQPGRLTMAEAAS Trigger: TGAAGCTGCCTCAGCCATTGTCAACCTGCCAGGCTGCAGTGCCAAAGAGCTGGCCCCTGCTGTGTCAGTGCTCCAGCTTTTCTGTAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CCA 72 bp | AGTCCCTGGAACTCAGGCACCGCTGCTAGCTGCTCTTaGAAAATCTCCTGCCGTGTGGCTGCTACCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPWNSGTAASCS*KISCRVAATFS Trigger: GGAGAAGGTAGCAGCCACACGGCAGGAGATTTTCCAAGAGCAGCTAGCAGCGGTGCCTGAGTTCCAGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 72 bp | GGCTCAGGAGAGGACTTGAAGAGAGGCCCTAGTCCCTaGAACTCAGGCACCGCTGCTAGCTGCTCTTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSGEDLKRGPSP*NSGTAASCSWK Trigger: TTTCCAAGAGCAGCTAGCAGCGGTGCCTGAGTTCCAGGGACTAGGGCCTCTCTTCAAGTCCTCTCCTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CAA 72 bp | TACAGAAGTCCTAGGGCATGGTACTGGACCATGATGTaGTCACTGGACGCCGCCTCCTGGGCCTCGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: YRSPRAWYWTMM*SLDAASWASFT Trigger: GGTGAACGAGGCCCAGGAGGCGGCGTCCAGTGACAACATCATGGTCCAGTACCATGCCCTAGGACTTCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS TCA 72 bp | CCACCATCTCATGCTTGTTACGCAGGCAGCTCTCGATaGAGTCAAACAGCGGGCTGTCACGGCTGCCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPSHACYAGSSR*SQTAGCHGCRL Trigger: AAGACGGCAGCCGTGACAGCCCGCTGTTTGACTTCATCGAGAGCTGCCTGCGTAACAAGCATGAGATGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 72 bp | TCAGGCACCGCTGCTAGCTGCTCTTGGAAAATCTCCTaGCGTGTGGCTGCTACCTTCTCCGGCTGTTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: SGTAASCSWKIS*RVAATFSGCLT Trigger: AGTCAAACAGCCGGAGAAGGTAGCAGCCACACGGCAGGAGATTTTCCAAGAGCAGCTAGCAGCGGTGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CAA 72 bp | TTCATAAGGCGGTCAATGCTGCTCTCGCTCCCTGTCTaGAGCAGGGTGGTGATGGCCAATGTGGCGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FIRRSMLLSLPV*SRVVMANVAML Trigger: GAGCATCGCCACATTGGCCATCACCACCCTGCTCAAGACAGGGAGCGAGAGCAGCATTGACCGCCTTATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS TCA 72 bp | TCCAAAAGCAGAAGCCGAGAACGCACAAGGATGTCATaGCCACCCCGGAATACTCCAGCTAGCAGCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SKSRSRERTRMS*PPRNTPASSSV Trigger: CACGCTGCTGCTAGCTGGAGTATTCCGGGGTGGTCATGACATCCTTGTGCGTTCTCGGCTTCTGCTTTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 72 bp | CTGGAAGAGCTTGGTCATGGCAAAGAAAGCCTCAGTTaGTTCCGTGGTCCCCAGGTGCTCCCCCTGGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LEELGHGKESLS*FRGPQVLPLVY Trigger: ATAAACCAGGGGGAGCACCTGGGGACCACGGAAGCAACTGAGGCTTTCTTTGCCATGACCAAGCTCTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049966.6 ENSMUST00000113607.10 |
||
| CDS TCA 72 bp | GGCCAGAGGCACAGACTTGAGGTCAAATGGCTTCTCTaGTGGTTCGAGTGTGTACTGCTGCAGGGCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GQRHRLEVKWLL*WFECVLLQGFL Trigger: GAGAAAGCCCTGCAGCAGTACACACTCGAACCATCAGAGAAGCCATTTGACCTCAAGTCTGTGCCTCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 72 bp | TCCAGATCTAGATTGCAGGCAGTCACCGCTGAAGGGTaGTTCATAGCCACCTTATTGAGGGTGCGCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRSRLQAVTAEG*FIATLLRVRTA Trigger: TGCTGTGCGCACCCTCAATAAGGTGGCTATGAAGCACCCTTCAGCGGTGACTGCCTGCAATCTAGATCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 72 bp | AGGTCAAATGGCTTCTCTGATGGTTCGAGTGTGTACTaGTGCAGGGCTTTCTCCAGACCAGGGATGGACACG | + |
|
Preference number: 6 (lower is better) Translates to: RSNGFSDGSSVY*CRAFSRPGMDT Trigger: CGTGTCCATCCCTGGTCTGGAGAAAGCCCTGCAGCAGTACACACTCGAACCATCAGAGAAGCCATTTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS GCA 72 bp | TCTACTGGCAGCTCCTCTGAGCTTCTGGCTGTCACCTaGATCGTCACTGTGTCCAAAAGCAGAAGCCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: STGSSSELLAVT*IVTVSKSRSRE Trigger: TTCTCGGCTTCTGCTTTTGGACACAGTGACGATGCAGGTGACAGCCAGAAGCTCAGAGGAGCTGCCAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 72 bp | ATTTCAGCAGGTGCAGGGAAGACACGAGGGCGGAGCTaGAGACACTGGGAACCTTGTCCACAATTGCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ISAGAGKTRGRS*RHWEPCPQLLV Trigger: AACAAGCAATTGTGGACAAGGTTCCCAGTGTCTCCAGCTCCGCCCTCGTGTCTTCCCTGCACCTGCTGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CCA 72 bp | GTGTGTACTGCTGCAGGGCTTTCTCCAGACCAGGGATaGACACGGTCAGACCATTTAGGATGTAACCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: VCTAAGLSPDQG*TRSDHLGCNLR Trigger: ACGCAGGTTACATCCTAAATGGTCTGACCGTGTCCATCCCTGGTCTGGAGAAAGCCCTGCAGCAGTACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
||
| CDS CAA 72 bp | ATGCGGCGGAGTGTGGGATCATTGGACTGGAAGAGCTaGGTCATGGCAAAGAAAGCCTCAGTTGCTTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: MRRSVGSLDWKS*VMAKKASVASV Trigger: CACGGAAGCAACTGAGGCTTTCTTTGCCATGACCAAGCTCTTCCAGTCCAATGATCCCACACTCCGCCGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049966.6 ENSMUST00000113607.10 |
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| CDS CAA 72 bp | GGGCGGAGCTGGAGACACTGGGAACCTTGTCCACAATaGCTTGTTTCATGTAGCGTTCAACAGCCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GRSWRHWEPCPQ*LVSCSVQQPAA Trigger: TGCTGCAGGCTGTTGAACGCTACATGAAACAAGCAATTGTGGACAAGGTTCCCAGTGTCTCCAGCTCCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CAA 90 bp | AAGACACGAGGGCGGAGCTGGAGACACTGGGAACCTTGTCCACAATaGCTTGTTTCATGTAGCGTTCAACAGCCTGCAGCATGGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KTRGRSWRHWEPCPQ*LVSCSVQQPAAWCC Trigger: ACAGCACCATGCTGCAGGCTGTTGAACGCTACATGAAACAAGCAATTGTGGACAAGGTTCCCAGTGTCTCCAGCTCCGCCCTCGTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS TCA 72 bp | CTCTTTGGCACTGCAGCCTGGCAGGTTGACAATGGCTaGGGCAGCTTCATACACCACCATCTCATGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LFGTAAWQVDNG*GSFIHHHLMLV Trigger: AACAAGCATGAGATGGTGGTGTATGAAGCTGCCTCAGCCATTGTCAACCTGCCAGGCTGCAGTGCCAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CCA 72 bp | ATCTTACTCACGGCCAGTCGGTCATTCTTCCGCACATaGTACAGAAGTCCTAGGGCATGGTACTGGACCATG | + |
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Preference number: 6 (lower is better) Translates to: ILLTASRSFFRT*YRSPRAWYWTM Trigger: CATGGTCCAGTACCATGCCCTAGGACTTCTGTACCATGTGCGGAAGAATGACCGACTGGCCGTGAGTAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CAA 90 bp | GCGATGCTCCTGTTTGAGTCTGTAACCAGGTTTTCCAGATCTAGATaGCAGGCAGTCACCGCTGAAGGGTGCTTCATAGCCACCTTATTG | + |
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Preference number: 6 (lower is better) Translates to: AMLLFESVTRFSRSR*QAVTAEGCFIATLL Trigger: CAATAAGGTGGCTATGAAGCACCCTTCAGCGGTGACTGCCTGCAATCTAGATCTGGAAAACCTGGTTACAGACTCAAACAGGAGCATCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS TCA 72 bp | CAGCGTGTGGGTGTTCTTGTTTTCTGGCACTTTGTCTaGCCTCTCACAAGGATGCATTCCCAGGAACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QRVGVLVFWHFV*PLTRMHSQELH Trigger: GTGAAGTTCCTGGGAATGCATCCTTGTGAGAGGTCAGACAAAGTGCCAGAAAACAAGAACACCCACACGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS GCA 72 bp | CTTAGCATGGTGAACAGGAAGTTCATGAGCACAGCATaGTTTCGAGGATACTTCTGGCACAGGGCACTGATG | + |
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Preference number: 6 (lower is better) Translates to: LSMVNRKFMSTA*FRGYFWHRALM Trigger: CATCAGTGCCCTGTGCCAGAAGTATCCTCGAAAGCATGCTGTGCTCATGAACTTCCTGTTCACCATGCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CAA 72 bp | CTGTTTGAGTCTGTAACCAGGTTTTCCAGATCTAGATaGCAGGCAGTCACCGCTGAAGGGTGCTTCATAGCC | + |
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Preference number: 6 (lower is better) Translates to: LFESVTRFSRSR*QAVTAEGCFIA Trigger: GGCTATGAAGCACCCTTCAGCGGTGACTGCCTGCAATCTAGATCTGGAAAACCTGGTTACAGACTCAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS TCA 72 bp | AGCAACACCAAGATACTAGGCAACATCTCTTCGTTCTaGGCTCCAAACTTGGCCAGAGCACTTACTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: SNTKILGNISSF*APNLARALTAP Trigger: AGGTGCAGTAAGTGCTCTGGCCAAGTTTGGAGCTCAGAACGAAGAGATGTTGCCTAGTATCTTGGTGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS TCA 72 bp | TGGACACGGTCAGACCATTTAGGATGTAACCTGCGTTaGGAGCCTTCTGCTTCTGTTCCAGAACGTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: WTRSDHLGCNLR*EPSASVPERSD Trigger: ATCTGAACGTTCTGGAACAGAAGCAGAAGGCTCTCAACGCAGGTTACATCCTAAATGGTCTGACCGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS CAA 72 bp | CTCTCACAAGGATGCATTCCCAGGAACTTCACAATATaGCCCACAGCCTCTTCGAGTGTCTTGATAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSQGCIPRNFTI*PTASSSVLIVD Trigger: GTCTACTATCAAGACACTCGAAGAGGCTGTGGGCAATATTGTGAAGTTCCTGGGAATGCATCCTTGTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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| CDS TCA 72 bp | GCTGCCTCAAAGTTCACTTTCATGACTTTTTGGATGTaGTCAGCCACAGTAACTTCCAGATCCTCCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: AASKFTFMTFWM*SATVTSRSSST Trigger: TGTGCTGGAGGATCTGGAAGTTACTGTGGCTGATCACATCCAAAAAGTCATGAAAGTGAACTTTGAGGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113607.10 |
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