Pregenerated sensors for COPB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030754Ensembl transcript IDs: ENSMUST00000033012.9
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTCTCCCCAAGGGACCTaGGGACCTCAGTCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFSPQGT*GPQSSH Trigger: GTGTGATGACTGAGGTCCGCAGGTCCCTTGGGGAGA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTGCTGCCTCTTTCCTCTaGGTATTACCCATTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFAASFL*VLPIAA Trigger: GGCAGCAATGGGTAATACTCAGAGGAAAGAGGCAGC...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATGAAGCGGGCCCTTTCTaGTGGATTAGCATGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHEAGPF*WISMTD Trigger: GTCTGTCATGCTAATCCATCAGAAAGGGCCCGCTTC...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTGCATCTGGTCCCTGGTaGACTGGCTTCTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLASGPW*TGFSML Trigger: CAGCATTGAGAAGCCAGTTCACCAGGGACCAGATGC...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTGGCTTCTGCATACACTaGATCCGAGAAGCCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFGFCIH*IREACQ Trigger: TTGACAGGCTTCTCGGATCCAGTGTATGCAGAAGCC...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTTCCGAAGGGGGTTCTaGATCCATTGGCACGTTAAT | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFFRRGF*IHWHVN Trigger: ATTAACGTGCCAATGGATTCAGAACCCCCTTCGGAA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTAGGTTGTCAAAGCGCTaGATGGCTTCACGAACAAAC | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFRLSKR*MASRTN Trigger: GTTTGTTCGTGAAGCCATTCAGCGCTTTGACAACCT...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTAATTCGGCCCACATCTaGCGGAACTCAGCATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLNSAHI*RNSASV Trigger: CACTGATGCTGAGTTCCGTCAGATGTGGGCCGAATT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTCTGGCTTCTCAATGCTaGCATTTGCAAGTGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFLASQC*HLQVHP Trigger: AGGATGCACTTGCAAATGTCAGCATTGAGAAGCCAG...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTGACATCAGCAGCTGCTaGTTCATTACTGTCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFDISSC*FITVTE Trigger: CTCAGTGACAGTAATGAAGCAGCAGCTGCTGATGTC...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAGCGCAATGCAATCTTaGTTAGAGTTGTGGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHSAMQS*LELWRG Trigger: CCCTCGCCACAACTCTAACCAAGATTGCATTGCGCT...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTGCAGGACTCGTTCATaGGCAGGATGCTCTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFCRTRS*AGCSFN Trigger: ATTAAAAGAGCATCCTGCTCATGAACGAGTCCTGCA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTCCGTAACCAATTTCTaGACGGGCCCAACAGTTATT | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFSVTNF*TGPTVI Trigger: AATAACTGTTGGGCCCGTTCAGAAATTGGTTACGGA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTCGCAGTTAGTTGCATaGAGGAAATGGGGTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHSQLVA*RKWGHQ Trigger: CTGATGACCCCATTTCCTTCATGCAACTAACTGCGA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTGAGAAGCCTGTCAACTaGGTGACCTTGTTAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFEKPVN*VTLLSL Trigger: CAAACTTAACAAGGTCACTCAGTTGACAGGCTTCTC...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTCGATGTCGTACTGATTaGCATGAACATAGGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFRCRTD*HEHRLL Trigger: CAGAAGCCTATGTTCATGTCAATCAGTACGACATCG...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTCTTGGTTAGAGTTGTaGCGAGGGAAGCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHSWLEL*RGKQQQ Trigger: TTGTTGCTGCTTCCCTCGCCACAACTCTAACCAAGA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTCCATGATGTCAATGTaGATGTCACTGAGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFSMMSM*MSLRTT Trigger: TGTGGTCCTCAGTGACATCCACATTGACATCATGGA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATCAAAGCTTCAGTCTTTaGCTTCACATCGCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHQSFSL*LHIAFL Trigger: GAGAAAGGCGATGTGAAGTCAAAGACTGAAGCTTTG...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTATTCAGATAAGACCTTaGGGCACAGGGAAATTCGAT | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFIQIRP*GTGKFD Trigger: ATCGAATTTCCCTGTGCCTCAAGGTCTTATCTGAAT...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTTCCCAGGATCCACAATaGTCCTCGGTAAATCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLSQDPQ*SSVNLD Trigger: GTCAAGATTTACCGAGGAGCATTGTGGATCCTGGGA...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATCTGAGTATTACCCATTaGTGCCAACAAACTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHLSITH*CQQTQL Trigger: CAGCTGAGTTTGTTGGCAGCAATGGGTAATACTCAG...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATATTTGCAGCCATATCTaGAAATCGGACAGAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHICSHI*KSDRAG Trigger: TCCTGCTCTGTCCGATTTCCAGATATGGCTGCAAAT...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTGTCAAAGCGCTGAATaGCTTCACGAACAAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFCQSAE*LHEQTL Trigger: TAGAGTTTGTTCGTGAAGCCATTCAGCGCTTTGACA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATGAACCCTCTCAAGGGTaGTCTGTCTTCTTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHEPSQG*SVFFFL Trigger: AAGAAAGAAGAAGACAGACCACCCTTGAGAGGGTTC...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTTGGCAGATAACATTTaGGAAAGAGACTGTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFLADNI*ERDCLH Trigger: GTGCAGACAGTCTCTTTCCCAAATGTTATCTGCCAA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTCAGATCCCCTAGAGTaGCTAACTCTAATGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHSDPLE*LTLMCS Trigger: ACTGCACATTAGAGTTAGCCACTCTAGGGGATCTGA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTAGAAAGGGCCTTCTCTaGAGTCAGGCACTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLRKGLL*SQALHV Trigger: AACATGAAGTGCCTGACTCCAGAGAAGGCCCTTTCT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATGAGGATTTTCCCAAATaGAGGATAGTTGCCATAAGC | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHEDFPK*RIVAIS Trigger: GCTTATGGCAACTATCCTTCATTTGGGAAAATCCTC...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTATATTTGCAAAGTCATaGGGAGCAAGAGTCAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFIFAKS*GARVKG Trigger: TCCTTTGACTCTTGCTCCTCATGACTTTGCAAATAT...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTGCTGGATATAGTCCATaGTGTCAATGTGGATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLAGYSP*CQCGCH Trigger: GTGACATCCACATTGACATCATGGACTATATCCAGC...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTTCATGTTGGTCGACTTaGGGATGTGCTGTAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLSCWST*GCAVSS Trigger: ACTACTTACAGCACATCCTCAAGTCGACCAACATGA...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTAGGTTCCAGCAATTCTaGTTCCTTCAATTTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFRFQQF*FLQFAK Trigger: CTTTGCAAATTGAAGGAAGCAGAATTGCTGGAACCT...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTAGATCCAGTGCTAACTaGAGCGTTTTCTTACGCACT | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLRSSAN*SVFLRT Trigger: AGTGCGTAAGAAAACGCTGCAGTTAGCACTGGATCT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTCACAGGAATAACATTTaGAGCCATATCTGGAAATCG | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFHRNNI*SHIWKS Trigger: CGATTTCCAGATATGGCTGCAAATGTTATTCCTGTG...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTTCTTCGCAGTTAGTTaGATGAAGGAAATGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHFFAVS*MKEMGS Trigger: TGACCCCATTTCCTTCATGCAACTAACTGCGAAGAA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTGGAACTGATCTTCCTTaGAGTTCATTTCATTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFGTDLP*SSFHSS Trigger: CGAAGAATGAAATGAACTGCAAGGAAGATCAGTTCC...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAGTATTACCCATTGCTaGCAACAAACTCAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHSITHC*QQTQLE Trigger: TTCCAGCTGAGTTTGTTGGCAGCAATGGGTAATACT...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTAGCATCAGTGCAAGTTaGAGGCTGGATATAGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLSISAS*RLDIVH Trigger: ATGGACTATATCCAGCCTGCAACTTGCACTGATGCT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTGCATAAAGATTGGCTaGCATAAAGCCACAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHCIKIG*HKATVS Trigger: GGATACTGTGGCTTTATGGCAGCCAATCTTTATGCA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTGCTGACATTTGCAAGTaGATCCTCTCCAAATATAGA | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFADICK*ILSKYR Trigger: TCTATATTTGGAGAGGATGCACTTGCAAATGTCAGC...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATCTCAATGCTGACATTTaGAAGTGCATCCTCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHLNADI*KCILSK Trigger: TTTGGAGAGGATGCACTTGCAAATGTCAGCATTGAG...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTACAGACTTAATAGCATaGAAGACTTCCAGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFTDLIA*KTSSIF Trigger: GAAGATGCTGGAAGTCTTCCATGCTATTAAGTCTGT...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTGCACGAATTCTTATATaGCCAGTAACGGCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLARILI*PVTAAS Trigger: AGATGCTGCCGTTACTGGCCATATAAGAATTCGTGC...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTTCAGTCATCACACTCTaGATGTCTTCCTTTGTACTG | + |
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Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLSVITL*MSSFVL Trigger: CAGTACAAAGGAAGACATTCAGAGTGTGATGACTGA...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTAAACTCAGCTGGAACTaGTCTTCCTTGCAGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLKLSWN*SSLQFI Trigger: AATGAACTGCAAGGAAGATCAGTTCCAGCTGAGTTT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATCAAATGAAGGATAGTTaGCATAAGCAACATAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHQMKDS*HKQHSL Trigger: GAGGCTATGTTGCTTATGGCAACTATCCTTCATTTG...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTGGCTAACTCTAATGTaGAGTTCTGCAAAGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHWLTLM*SSAKYH Trigger: GTGATACTTTGCAGAACTGCACATTAGAGTTAGCCA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTCTCTTCTTCGAGTTTaGCAGATAACATTTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFSLLRV*QITFGK Trigger: TTTCCCAAATGTTATCTGCCAAACTCGAAGAAGAGA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTCAGATTCTTTCTTCTaGGATAGTTTCTCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SMKRVQKMLESNQPTPKFSDSFF*DSFSSS Trigger: CGAAGAAGAGAAACTATCCCAGAAGAAAGAATCTGA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTTATTCCGTTTTCTGTTaGTGCTACCTTGACATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLYSVFC*CYLDIS Trigger: GCTAATGTCAAGGTAGCATCAACAGAAAACGGAATA...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTTCTTTTGAGACAGGTTaGTTTTATCTCCAAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLSFETG*FYLQGS Trigger: TGAGCCTTGGAGATAAAATCAACCTGTCTCAAAAGA...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTATAAACTCATTGGGGTaGTGGAGATCCTTTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLINSLG*WRSFLY Trigger: ATACAGAAAGGATCTCCAGCACCCCAATGAGTTTAT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTCCAAATATAGAACGTaGATAAAGATTGGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHSKYRT*IKIGCH Trigger: ATGGCAGCCAATCTTTATGCACGTTCTATATTTGGA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTCATTCCCTGACTTTTTaGACGAATTCTTATATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLHSLTF*TNSYMA Trigger: GGCCATATAAGAATTCGTGCAAAAAGTCAGGGAATG...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATATCATCATCAGTAATTaGCTTCTTAGGAAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHIIISN*LLRKRG Trigger: TCCTCTCTTCCTAAGAAGCCAATTACTGATGATGAT...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTCTGCAAAGTATCACTaGTTTGGTTTACAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEYKRCWSPISPHLNFKHSAKYH*FGLQPE Trigger: TTCTGGTTGTAAACCAAACCAGTGATACTTTGCAGA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTCTTCATTACTGTCACTaGGAAATTCCATTAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLLHYCH*EIPLTQ Trigger: CTGTGTTAATGGAATTTCTCAGTGACAGTAATGAAG...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTATTTCTTTTGCAGCTTaGATCCTTCTCATTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLISFAA*ILLIHK Trigger: CTTGTGAATGAGAAGGATGCAAGCTGCAAAAGAAAT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTAAAGTATCACTGGTTTaGTTTACAACCAGAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLKVSLV*FTTRTS Trigger: GGATGTTCTGGTTGTAAACCAAACCAGTGATACTTT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTAAGAGTCAAAGGAGATaGTTTTTCCACAAGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLKSQRR*FFHKFQ Trigger: CTGAAACTTGTGGAAAAACCATCTCCTTTGACTCTT...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CCA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTCAAAATTTCTGTAGATaGTATAGATGGCCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YKRCWSPISPHLNFKHKLQNFCR*YRWPKQ Trigger: CTGTTTTGGCCATCTATACCATCTACAGAAATTTTG...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS TCA 90 bp | GCACGAATTCTTATATGGCCAGTAACGGCAGCATCTGGTCCCTGGTaGACTGGCTTCTCAATGCTGACATTTGCAAGTGCATCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARILIWPVTAASGPW*TGFSMLTFASASSP Trigger: TGGAGAGGATGCACTTGCAAATGTCAGCATTGAGAAGCCAGTTCACCAGGGACCAGATGCTGCCGTTACTGGCCATATAAGAATTCGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 90 bp | CCTGAACCAACGCTACATAGCGCAATGCAATCTTGGTTAGAGTTGTaGCGAGGGAAGCAGCAACAAAGAAATCTCCATCCAGGAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: PEPTLHSAMQSWLEL*RGKQQQRNLHPGGT Trigger: GGTTCCTCCTGGATGGAGATTTCTTTGTTGCTGCTTCCCTCGCCACAACTCTAACCAAGATTGCATTGCGCTATGTAGCGTTGGTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS TCA 90 bp | CAGAAAGGGCCTTCTCTGGAGTCAGGCACTTCATGTTGGTCGACTTaGGGATGTGCTGTAAGTAGTCATTCAGGTCAGTCATGTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QKGPSLESGTSCWST*GCAVSSHSGQSCWC Trigger: ACACCAACATGACTGACCTGAATGACTACTTACAGCACATCCTCAAGTCGACCAACATGAAGTGCCTGACTCCAGAGAAGGCCCTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS GCA 90 bp | TTCAAATTCGGCCCACATCTGACGGAACTCAGCATCAGTGCAAGTTaGAGGCTGGATATAGTCCATGATGTCAATGTGGATGTCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKFGPHLTELSISAS*RLDIVHDVNVDVTE Trigger: CTCAGTGACATCCACATTGACATCATGGACTATATCCAGCCTGCAACTTGCACTGATGCTGAGTTCCGTCAGATGTGGGCCGAATTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS CCA 90 bp | CTGACTTTTTGCACGAATTCTTATATGGCCAGTAACGGCAGCATCTaGTCCCTGGTGAACTGGCTTCTCAATGCTGACATTTGCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTFCTNSYMASNGSI*SLVNWLLNADICKC Trigger: GCACTTGCAAATGTCAGCATTGAGAAGCCAGTTCACCAGGGACCAGATGCTGCCGTTACTGGCCATATAAGAATTCGTGCAAAAAGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 90 bp | TGGTTTGGTTTACAACCAGAACATCCAGGACGATGTCGTACTGATTaGCATGAACATAGGCTTCTGCATACACTGGATCCGAGAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WFGLQPEHPGRCRTD*HEHRLLHTLDPRSL Trigger: CAGGCTTCTCGGATCCAGTGTATGCAGAAGCCTATGTTCATGTCAATCAGTACGACATCGTCCTGGATGTTCTGGTTGTAAACCAAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 90 bp | GGAATAACATTTGCAGCCATATCTGGAAATCGGACAGAGCAGGAATaGAGTGTTCGCACGAGAAGCTGTCGGTATTTGTCAGTGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GITFAAISGNRTEQE*SVRTRSCRYLSVSS Trigger: TGAAGACACTGACAAATACCGACAGCTTCTCGTGCGAACACTGCATTCCTGCTCTGTCCGATTTCCAGATATGGCTGCAAATGTTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 90 bp | AACATCCAGGACGATGTCGTACTGATTGACATGAACATAGGCTTCTaGATACACTGGATCCGAGAAGCCTGTCAACTGAGTGACCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NIQDDVVLIDMNIGF*IHWIREACQLSDLV Trigger: AACAAGGTCACTCAGTTGACAGGCTTCTCGGATCCAGTGTATGCAGAAGCCTATGTTCATGTCAATCAGTACGACATCGTCCTGGATGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 90 bp | GCTTTTTCTTCTCCTGAACCAACGCTACATAGCGCAATGCAATCTTaGTTAGAGTTGTGGCGAGGGAAGCAGCAACAAAGAAATCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AFSSPEPTLHSAMQS*LELWRGKQQQRNLH Trigger: ATGGAGATTTCTTTGTTGCTGCTTCCCTCGCCACAACTCTAACCAAGATTGCATTGCGCTATGTAGCGTTGGTTCAGGAGAAGAAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 90 bp | GACGATGTCGTACTGATTGACATGAACATAGGCTTCTGCATACACTaGATCCGAGAAGCCTGTCAACTGAGTGACCTTGTTAAGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DDVVLIDMNIGFCIH*IREACQLSDLVKFG Trigger: TCCAAACTTAACAAGGTCACTCAGTTGACAGGCTTCTCGGATCCAGTGTATGCAGAAGCCTATGTTCATGTCAATCAGTACGACATCGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 90 bp | CCCCTAGAGTGGCTAACTCTAATGTGCAGTTCTGCAAAGTATCACTaGTTTGGTTTACAACCAGAACATCCAGGACGATGTCGTACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLEWLTLMCSSAKYH*FGLQPEHPGRCRTD Trigger: ATCAGTACGACATCGTCCTGGATGTTCTGGTTGTAAACCAAACCAGTGATACTTTGCAGAACTGCACATTAGAGTTAGCCACTCTAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 90 bp | ACCAACTCTTCAACATTCCTAGATGAGACAAGATCCAGTGCTAACTaGAGCGTTTTCTTACGCACTTCTAAGTCTGGCGTACTCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: TNSSTFLDETRSSAN*SVFLRTSKSGVLST Trigger: AGTACTGAGTACGCCAGACTTAGAAGTGCGTAAGAAAACGCTGCAGTTAGCACTGGATCTTGTCTCATCTAGGAATGTTGAAGAGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CAA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATTTGCAGTTGGTGCACTaGACAGTGTTACCAGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KEYKRCWSPISPHLNFKHLQLVH*TVLPVS Trigger: GGACACTGGTAACACTGTCAAGTGCACCAACTGCAA...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTCTGTCTTCTTCTTTCTaGGTAGGTCTGGAACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFLSSSF*VGLELL Trigger: CAGCAGTTCCAGACCTACCAAGAAAGAAGAAGACAG...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CAA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATCAGCATCAGTGCAAGTaGCAGGCTGGATATAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEYKRCWSPISPHLNFKHQHQCK*QAGYSP Trigger: TGGACTATATCCAGCCTGCAACTTGCACTGATGCTG...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS GCA 90 bp | GTTTTTCCACAAGTTTCAGATCCCCTAGAGTGGCTAACTCTAATGTaGAGTTCTGCAAAGTATCACTGGTTTGGTTTACAACCAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VFPQVSDPLEWLTLM*SSAKYHWFGLQPEH Trigger: ATGTTCTGGTTGTAAACCAAACCAGTGATACTTTGCAGAACTGCACATTAGAGTTAGCCACTCTAGGGGATCTGAAACTTGTGGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTCTGAATGTCTTCCTTaGTACTGCAGTACTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFSECLP*YCSTLP Trigger: TGGGAGAGTACTGCAGTACAAAGGAAGACATTCAGA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTCATTCAGATAAGACCTaGAGGCACAGGGAAATTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFHSDKT*RHREIR Trigger: TCGAATTTCCCTGTGCCTCAAGGTCTTATCTGAATG...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CAA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATGTGACCTTGTTAAGTTaGGATGCTAGGGGATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEYKRCWSPISPHLNFKHVTLLS*DARGSA Trigger: AGCTGATCCCCTAGCATCCAAACTTAACAAGGTCAC...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTCAAAGCTTCAGTCTTaGACTTCACATCGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFSKLQS*TSHRLS Trigger: AGAAAGGCGATGTGAAGTCAAAGACTGAAGCTTTGA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTCCACGAATAAACTCATaGGGGTGCTGGAGATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YKRCWSPISPHLNFKHKLPRINS*GCWRSF Trigger: AAAGGATCTCCAGCACCCCAATGAGTTTATTCGTGG...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAGAAGCTGTCGGTATTaGTCAGTGTCTTCATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KEYKRCWSPISPHLNFKHRSCRY*SVSSCS Trigger: TGAGCATGAAGACACTGACAAATACCGACAGCTTCT...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATCACAGTTTCTGTCACTaGCTGCTCCAGAAACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: KEYKRCWSPISPHLNFKHHSFCH*LLQKHH Trigger: ATGATGTTTCTGGAGCAGCAAGTGACAGAAACTGTG...ATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTCATTTCTTTTGCAGCTaGCATCCTTCTCATTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFHFFCS*HPSHSQ Trigger: TTGTGAATGAGAAGGATGCAAGCTGCAAAAGAAATG...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTTCTCTTCTTCGAGTTaGGCAGATAACATTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFFSSSS*ADNIWE Trigger: TTCCCAAATGTTATCTGCCAAACTCGAAGAAGAGAA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTCAAAGTATCACTGGTTaGGTTTACAACCAGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFQSITG*VYNQNI Trigger: GATGTTCTGGTTGTAAACCAAACCAGTGATACTTTG...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTTCAGGTCAGTCATGTaGGTGTTAACTGTCACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFFRSVM*VLTVTL Trigger: TAAAGTGACAGTTAACACCAACATGACTGACCTGAA...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS TCA 90 bp | TCTGTTGATGCTACCTTGACATTAGCTTTAATATTTGCAAAGTCATaGGGAGCAAGAGTCAAAGGAGATGGTTTTTCCACAAGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVDATLTLALIFAKS*GARVKGDGFSTSFR Trigger: TCTGAAACTTGTGGAAAAACCATCTCCTTTGACTCTTGCTCCTCATGACTTTGCAAATATTAAAGCTAATGTCAAGGTAGCATCAACAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGAAAAGAGTACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTATAAATGCATTTCTTTaGCAGCTTGCATCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SMKRVQKMLESNQPTPKFINAFL*QLASFS Trigger: TGAGAAGGATGCAAGCTGCAAAAGAAATGCATTTAT...AAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTACTCTTTTCATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS-3UTR CAA 90 bp | TACAAAAGATGTTGGAGTCCAATCAGCCCACACCTAAATTTTAAGCATAAACTTCCATTCCCTGACTTTTaGCACGAATTCTTATATGGC | + |
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Preference number: 5 (lower is better) Translates to: YKRCWSPISPHLNFKHKLPFPDF*HEFLYG Trigger: GCCATATAAGAATTCGTGCAAAAAGTCAGGGAATGG...AAGTTTATGCTTAAAATTTAGGTGTGGGCTGATTGGACTCCAACATCTTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 72 bp | TCCCCAAGGGACCTGCGGACCTCAGTCATCACACTCTaGATGTCTTCCTTTGTACTGCAGTACTCTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPRDLRTSVITL*MSSFVLQYSPR Trigger: CCTGGGAGAGTACTGCAGTACAAAGGAAGACATTCAGAGTGTGATGACTGAGGTCCGCAGGTCCCTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 90 bp | CAAGGGACCTGCGGACCTCAGTCATCACACTCTGAATGTCTTCCTTaGTACTGCAGTACTCTCCCAGGATCCACAATGCTCCTCGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: QGTCGPQSSHSECLP*YCSTLPGSTMLLGK Trigger: TTTACCGAGGAGCATTGTGGATCCTGGGAGAGTACTGCAGTACAAAGGAAGACATTCAGAGTGTGATGACTGAGGTCCGCAGGTCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 72 bp | AGGATGTCCATGACCAGATCCTGCAGGACTCGTTCATaGGCAGGATGCTCTTTTAATTCCACCAAGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RMSMTRSCRTRS*AGCSFNSTKRS Trigger: GGACCGCTTGGTGGAATTAAAAGAGCATCCTGCTCATGAACGAGTCCTGCAGGATCTGGTCATGGACATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 72 bp | CTTATATGGCCAGTAACGGCAGCATCTGGTCCCTGGTaGACTGGCTTCTCAATGCTGACATTTGCAAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LIWPVTAASGPW*TGFSMLTFASA Trigger: TGCACTTGCAAATGTCAGCATTGAGAAGCCAGTTCACCAGGGACCAGATGCTGCCGTTACTGGCCATATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | GGCCCACATCTGACGGAACTCAGCATCAGTGCAAGTTaGAGGCTGGATATAGTCCATGATGTCAATGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: GPHLTELSISAS*RLDIVHDVNVD Trigger: ATCCACATTGACATCATGGACTATATCCAGCCTGCAACTTGCACTGATGCTGAGTTCCGTCAGATGTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 72 bp | GGGGATCAGCTGCCTCTTTCCTCTGAGTATTACCCATaGCTGCCAACAAACTCAGCTGGAACTGATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GDQLPLSSEYYP*LPTNSAGTDLP Trigger: AGGAAGATCAGTTCCAGCTGAGTTTGTTGGCAGCAATGGGTAATACTCAGAGGAAAGAGGCAGCTGATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 90 bp | TCTCCTGAACCAACGCTACATAGCGCAATGCAATCTTGGTTAGAGTaGTGGCGAGGGAAGCAGCAACAAAGAAATCTCCATCCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPEPTLHSAMQSWLE*WRGKQQQRNLHPGG Trigger: TCCTCCTGGATGGAGATTTCTTTGTTGCTGCTTCCCTCGCCACAACTCTAACCAAGATTGCATTGCGCTATGTAGCGTTGGTTCAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 90 bp | TGGATGCTAGGGGATCAGCTGCCTCTTTCCTCTGAGTATTACCCATaGCTGCCAACAAACTCAGCTGGAACTGATCTTCCTTGCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: WMLGDQLPLSSEYYP*LPTNSAGTDLPCSS Trigger: TGAACTGCAAGGAAGATCAGTTCCAGCTGAGTTTGTTGGCAGCAATGGGTAATACTCAGAGGAAAGAGGCAGCTGATCCCCTAGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 72 bp | ACACTGAGCAGCAGCCTTTATTGCAGTTGGTGCACTTaGCAGTGTTACCAGTGTCCCAGCAGCCTCATATTT | + |
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Preference number: 6 (lower is better) Translates to: TLSSSLYCSWCT*QCYQCPSSLIF Trigger: AAATATGAGGCTGCTGGGACACTGGTAACACTGTCAAGTGCACCAACTGCAATAAAGGCTGCTGCTCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 72 bp | GTCACTTTATTTTCCCATTCAAATTCGGCCCACATCTaGCGGAACTCAGCATCAGTGCAAGTTGCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VTLFSHSNSAHI*RNSASVQVAGW Trigger: CCAGCCTGCAACTTGCACTGATGCTGAGTTCCGTCAGATGTGGGCCGAATTTGAATGGGAAAATAAAGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 72 bp | CCTTCTCTGGAGTCAGGCACTTCATGTTGGTCGACTTaGGGATGTGCTGTAAGTAGTCATTCAGGTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSLESGTSCWST*GCAVSSHSGQS Trigger: TGACTGACCTGAATGACTACTTACAGCACATCCTCAAGTCGACCAACATGAAGTGCCTGACTCCAGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | TTTGCAGCCATATCTGGAAATCGGACAGAGCAGGAATaGAGTGTTCGCACGAGAAGCTGTCGGTATTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FAAISGNRTEQE*SVRTRSCRYLS Trigger: TGACAAATACCGACAGCTTCTCGTGCGAACACTGCATTCCTGCTCTGTCCGATTTCCAGATATGGCTGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | GGGATCAGCTGCCTCTTTCCTCTGAGTATTACCCATTaGTGCCAACAAACTCAGCTGGAACTGATCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GISCLFPLSITH*CQQTQLELIFL Trigger: AAGGAAGATCAGTTCCAGCTGAGTTTGTTGGCAGCAATGGGTAATACTCAGAGGAAAGAGGCAGCTGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 72 bp | TCTCCTGAACCAACGCTACATAGCGCAATGCAATCTTaGTTAGAGTTGTGGCGAGGGAAGCAGCAACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SPEPTLHSAMQS*LELWRGKQQQR Trigger: TCTTTGTTGCTGCTTCCCTCGCCACAACTCTAACCAAGATTGCATTGCGCTATGTAGCGTTGGTTCAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 72 bp | TGCACGAATTCTTATATGGCCAGTAACGGCAGCATCTaGTCCCTGGTGAACTGGCTTCTCAATGCTGACATT | + |
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Preference number: 6 (lower is better) Translates to: CTNSYMASNGSI*SLVNWLLNADI Trigger: AATGTCAGCATTGAGAAGCCAGTTCACCAGGGACCAGATGCTGCCGTTACTGGCCATATAAGAATTCGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | TTTCTGATTCTACAATTGGTATCTCCCCAAGGGACCTaGGGACCTCAGTCATCACACTCTGAATGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FLILQLVSPQGT*GPQSSHSECLP Trigger: AGGAAGACATTCAGAGTGTGATGACTGAGGTCCGCAGGTCCCTTGGGGAGATACCAATTGTAGAATCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | ATCAGCTGCCTCTTTCCTCTGAGTATTACCCATTGCTaGCAACAAACTCAGCTGGAACTGATCTTCCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ISCLFPLSITHC*QQTQLELIFLA Trigger: TGCAAGGAAGATCAGTTCCAGCTGAGTTTGTTGGCAGCAATGGGTAATACTCAGAGGAAAGAGGCAGCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | GACGATGTCGTACTGATTGACATGAACATAGGCTTCTaGATACACTGGATCCGAGAAGCCTGTCAACTGAGT | + |
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Preference number: 6 (lower is better) Translates to: DDVVLIDMNIGF*IHWIREACQLS Trigger: ACTCAGTTGACAGGCTTCTCGGATCCAGTGTATGCAGAAGCCTATGTTCATGTCAATCAGTACGACATCGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 72 bp | CCAACGCTACATAGCGCAATGCAATCTTGGTTAGAGTaGTGGCGAGGGAAGCAGCAACAAAGAAATCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PTLHSAMQSWLE*WRGKQQQRNLH Trigger: ATGGAGATTTCTTTGTTGCTGCTTCCCTCGCCACAACTCTAACCAAGATTGCATTGCGCTATGTAGCGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS TCA 72 bp | TTACAACCAGAACATCCAGGACGATGTCGTACTGATTaGCATGAACATAGGCTTCTGCATACACTGGATCCG | + |
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Preference number: 6 (lower is better) Translates to: LQPEHPGRCRTD*HEHRLLHTLDP Trigger: CGGATCCAGTGTATGCAGAAGCCTATGTTCATGTCAATCAGTACGACATCGTCCTGGATGTTCTGGTTGTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 72 bp | GTACTGATTGACATGAACATAGGCTTCTGCATACACTaGATCCGAGAAGCCTGTCAACTGAGTGACCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VLIDMNIGFCIH*IREACQLSDLV Trigger: AACAAGGTCACTCAGTTGACAGGCTTCTCGGATCCAGTGTATGCAGAAGCCTATGTTCATGTCAATCAGTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | TCAACATTCCTAGATGAGACAAGATCCAGTGCTAACTaGAGCGTTTTCTTACGCACTTCTAAGTCTGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: STFLDETRSSAN*SVFLRTSKSGV Trigger: TACGCCAGACTTAGAAGTGCGTAAGAAAACGCTGCAGTTAGCACTGGATCTTGTCTCATCTAGGAATGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | ATCCTCTCCAAATATAGAACGTGCATAAAGATTGGCTaGCATAAAGCCACAGTATCCAGAAAGGGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ILSKYRTCIKIG*HKATVSRKGLL Trigger: GAGAAGGCCCTTTCTGGATACTGTGGCTTTATGGCAGCCAATCTTTATGCACGTTCTATATTTGGAGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 72 bp | CAAAGGAAACGAAGAGTAGATCCACGAATAAACTCATaGGGGTGCTGGAGATCCTTTCTGTATGCATCACAC | + |
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Preference number: 6 (lower is better) Translates to: QRKRRVDPRINS*GCWRSFLYASH Trigger: GTGTGATGCATACAGAAAGGATCTCCAGCACCCCAATGAGTTTATTCGTGGATCTACTCTTCGTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 72 bp | CAGGAATGCAGTGTTCGCACGAGAAGCTGTCGGTATTaGTCAGTGTCTTCATGCTCAGACACATTATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: QECSVRTRSCRY*SVSSCSDTLFV Trigger: AACAAATAATGTGTCTGAGCATGAAGACACTGACAAATACCGACAGCTTCTCGTGCGAACACTGCATTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 90 bp | CGGATAGCAGGCATTAAAGGTTCCAGCAATTCTGCTTCCTTCAATTaGCAAAGGAAACGAAGAGTAGATCCACGAATAAACTCATTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RIAGIKGSSNSASFN*QRKRRVDPRINSLG Trigger: CCCCAATGAGTTTATTCGTGGATCTACTCTTCGTTTCCTTTGCAAATTGAAGGAAGCAGAATTGCTGGAACCTTTAATGCCTGCTATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 90 bp | CGGACAGAGCAGGAATGCAGTGTTCGCACGAGAAGCTGTCGGTATTaGTCAGTGTCTTCATGCTCAGACACATTATTTGTTTTAATTACT | + |
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Preference number: 6 (lower is better) Translates to: RTEQECSVRTRSCRY*SVSSCSDTLFVLIT Trigger: AGTAATTAAAACAAATAATGTGTCTGAGCATGAAGACACTGACAAATACCGACAGCTTCTCGTGCGAACACTGCATTCCTGCTCTGTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | AAACGAAGAGTAGATCCACGAATAAACTCATTGGGGTaGTGGAGATCCTTTCTGTATGCATCACACACAAGA | + |
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Preference number: 6 (lower is better) Translates to: KRRVDPRINSLG*WRSFLYASHTR Trigger: TCTTGTGTGTGATGCATACAGAAAGGATCTCCAGCACCCCAATGAGTTTATTCGTGGATCTACTCTTCGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | GTGGATGTCACTGAGGACCACACAGTTTCTGTCACTTaGTGCTCCAGAAACATCATAAACTATATTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VDVTEDHTVSVT*CSRNIINYIAK Trigger: TTTGGCAATATAGTTTATGATGTTTCTGGAGCAGCAAGTGACAGAAACTGTGTGGTCCTCAGTGACATCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | GACATTTGCAAGTGCATCCTCTCCAAATATAGAACGTaGATAAAGATTGGCTGCCATAAAGCCACAGTATCC | + |
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Preference number: 6 (lower is better) Translates to: DICKCILSKYRT*IKIGCHKATVS Trigger: GGATACTGTGGCTTTATGGCAGCCAATCTTTATGCACGTTCTATATTTGGAGAGGATGCACTTGCAAATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CCA 72 bp | TGGCTAACTCTAATGTGCAGTTCTGCAAAGTATCACTaGTTTGGTTTACAACCAGAACATCCAGGACGATGT | + |
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Preference number: 6 (lower is better) Translates to: WLTLMCSSAKYH*FGLQPEHPGRC Trigger: ACATCGTCCTGGATGTTCTGGTTGTAAACCAAACCAGTGATACTTTGCAGAACTGCACATTAGAGTTAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | CAAGTTTCAGATCCCCTAGAGTGGCTAACTCTAATGTaGAGTTCTGCAAAGTATCACTGGTTTGGTTTACAA | + |
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Preference number: 6 (lower is better) Translates to: QVSDPLEWLTLM*SSAKYHWFGLQ Trigger: TTGTAAACCAAACCAGTGATACTTTGCAGAACTGCACATTAGAGTTAGCCACTCTAGGGGATCTGAAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS GCA 72 bp | CGCACGAGAAGCTGTCGGTATTTGTCAGTGTCTTCATaGTCAGACACATTATTTGTTTTAATTACTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RTRSCRYLSVSS*SDTLFVLITSF Trigger: GAAGGAAGTAATTAAAACAAATAATGTGTCTGAGCATGAAGACACTGACAAATACCGACAGCTTCTCGTGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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| CDS CAA 72 bp | GGCATTAAAGGTTCCAGCAATTCTGCTTCCTTCAATTaGCAAAGGAAACGAAGAGTAGATCCACGAATAAAC | + |
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Preference number: 6 (lower is better) Translates to: GIKGSSNSASFN*QRKRRVDPRIN Trigger: GTTTATTCGTGGATCTACTCTTCGTTTCCTTTGCAAATTGAAGGAAGCAGAATTGCTGGAACCTTTAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033012.9 |
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