Pregenerated sensors for COP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040782Ensembl transcript IDs: ENSMUST00000076894.11, ENSMUST00000192215.6, ENSMUST00000195554.6, ENSMUST00000195800.6
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAGCGTTGTATCTGGATCTTTGAATGTGCACCACATGCATGCCTaGTGCTTAAGGAGCCCAGAAGAGGACGTCAGATCTCCTACTGGA | + |
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Preference number: 1 (lower is better) Translates to: VSVVSGSLNVHHMHA*CLRSPEEDVRSPTG Trigger: TCCAGTAGGAGATCTGACGTCCTCTTCTGGGCTCCTTAAGCACCAGGCATGCATGTGGTGCACATTCAAAGATCCAGATACAACGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR TCA 90 bp | TGGTTGACCTCTTCTCAGTCAGTGATCAGTCTTGGCCAGTATAACTaGGGGATTCTTGGTGCAAAGAGAACCAGAGTTGTAAGGACAGTC | + |
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Preference number: 1 (lower is better) Translates to: WLTSSQSVISLGQYN*GILGAKRTRVVRTV Trigger: GACTGTCCTTACAACTCTGGTTCTCTTTGCACCAAGAATCCCTCAGTTATACTGGCCAAGACTGATCACTGACTGAGAAGAGGTCAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR TCA 90 bp | CTTCTATTTAAAGGCATCCAAGGTGGCACTAACTGCTTCCTATCTTaGAGATGTTCAGGGCACTCATCCCTAACACCAGCATCTCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LLFKGIQGGTNCFLS*RCSGHSSLTPASLL Trigger: CAACAGAGATGCTGGTGTTAGGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGATGCCTTTAAATAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR TCA 90 bp | AAGCAAACTTGGGTTCTCTACAAGAGCAGCAGGACTCTTGACTGCTaGGCCTTTTCTCTCAGACTTGAGACCATTAAGTTTAGCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: KQTWVLYKSSRTLDC*AFSLRLETIKFSKF Trigger: AAACTTGCTAAACTTAATGGTCTCAAGTCTGAGAGAAAAGGCTCAGCAGTCAAGAGTCCTGCTGCTCTTGTAGAGAACCCAAGTTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR TCA 90 bp | AACAGTTCTCTAACAGTTATAAGAGACCATATGGCCAGCAAAGCCTaGAGTATTTCCTATATGTTCTTTTATAGAAAAGGTTGGTTGACC | + |
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Preference number: 1 (lower is better) Translates to: NSSLTVIRDHMASKA*SISYMFFYRKGWLT Trigger: GGTCAACCAACCTTTTCTATAAAAGAACATATAGGAAATACTTCAGGCTTTGCTGGCCATATGGTCTCTTATAACTGTTAGAGAACTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCGTAGGTGCTGGGGACTaGACCCAGATCCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SKVALTASYLEDVQGTHPVGAGD*TQILCR Trigger: CCTACAGAGGATCTGGGTTCAGTCCCCAGCACCTAC...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCTCAGTAACCTTCAGCTaGGGGATCCACTGGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: SKVALTASYLEDVQGTHPSVTFS*GIHWVV Trigger: CACTACCCAGTGGATCCCTCAGCTGAAGGTTACTGA...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR TCA 90 bp | CACCTATTTTCTAGCCATGCCCATTTGTCTACTAACGATAGTAGCTACATCCCTGACTCTCACCCCATCTaGCAAAAAGGTGTTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: HLFSSHAHLSTNDSSYIPDSHPI*QKGVPS Trigger: GCTAGGAACACCTTTTTGTCAGATGGGGTGAGAGTC...AGGGATGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTTTGTATCTGGATCTTTaGATGTGCACCACATGCATG | + |
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Preference number: 2 (lower is better) Translates to: QLRDPLGSGLCYLYPTILLYLDL*MCTTCM Trigger: CATGCATGTGGTGCACATTCAAAGATCCAGATACAA...AAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCCAGCCAGAACATTCTGTATAACCCATAAGTGCAACTTCTTCAAAAGATGGTGGCGAATTCTCTaGATATTCCCAGTGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PAPARTFCITHKCNFFKRWWRIL*IFPVSQ Trigger: TTGGGACACTGGGAATATCCAGAGAATTCGCCACCA...TCTTTTGAAGAAGTTGCACTTATGGGTTATACAGAATGTTCTGGCTGGGGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCTTTAACATTCACTGGTaGCAGATGGTAACTTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: SKVALTASYLEDVQGTHPFNIHW*QMVTSD Trigger: ATCAGAAGTTACCATCTGTCACCAGTGAATGTTAAA...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCTTCCTAGCTCAGCTGTaGCTCAATAAACTTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SKVALTASYLEDVQGTHPFLAQL*LNKLFV Trigger: AACAAAAAGTTTATTGAGCCACAGCTGAGCTAGGAA...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGCCTCTTCTCAGTCAGTaGTCAGTCTTGGCCAGTATA | + |
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Preference number: 2 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGPLLSQ*SVLASI Trigger: TATACTGGCCAAGACTGATCACTGACTGAGAAGAGG...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGTGACTATGCAGGCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATCTGAGGGATTCTTGGTaGAAAGAGAACCAGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: WNVTMQALQQKFMLDMYHLRDSW*KENQSC Trigger: ACAACTCTGGTTCTCTTTGCACCAAGAATCCCTCAG...ATGGTACATGTCCAACATAAACTTCTGCTGCAAAGCCTGCATAGTCACATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGGCTGCAGATGGCTTTTaGGAGGATCAAACACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGAADGF*EDQTQF Trigger: AAACTGTGTTTGATCCTCCCAAAAGCCATCTGCAGC...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR CAA 90 bp | AATAAGATTTATTTTCATTTATGTGTGAGCGTTGTATCTGGATCTTaGAATGTGCACCACATGCATGCCTGGTGCTTAAGGAGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: NKIYFHLCVSVVSGS*NVHHMHAWCLRSPE Trigger: TTCTGGGCTCCTTAAGCACCAGGCATGCATGTGGTGCACATTCAAAGATCCAGATACAACGCTCACACATAAATGAAAATAAATCTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR GCA 90 bp | TGTGACTATGCAGGCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTCGTGACCCAATGCCCTaGAATGTAAAAATGATTTAT | + |
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Preference number: 2 (lower is better) Translates to: CDYAGFAAEVYVGHVPLLRDPMP*NVKMIY Trigger: ATAAATCATTTTTACATTGCAGGGCATTGGGTCACG...AAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGCCTGCATAGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR GCA 90 bp | CACCTATTTTCTAGCCATGCCCATTTGTCTACTAACGATAGTAGCTACATCCCTTGTATAACCCATAAGTaGAACTTCTTCAAAAGACTC | + |
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Preference number: 2 (lower is better) Translates to: HLFSSHAHLSTNDSSYIPCITHK*NFFKRL Trigger: GAGTCTTTTGAAGAAGTTGCACTTATGGGTTATACA...AGGGATGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CCA 90 bp | TGTGACTATGCAGGCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTTTTATAGAAAAGGTTaGTTGACCTCTTCTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: CDYAGFAAEVYVGHVPLLFYRKG*LTSSQS Trigger: TGACTGAGAAGAGGTCAACCAACCTTTTCTATAAAA...AAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGCCTGCATAGTCACA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAAATCAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCCTATGCCCATTTGAGTaGTCCAATTTGAACCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: WPNQGYLDQFLVDLEIFALCPFE*SNLNLF Trigger: AAAGAGGTTCAAATTGGACCACTCAAATGGGCATAG...GGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTGATTTGGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
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| 3UTR GCA 72 bp | CGTTGTATCTGGATCTTTGAATGTGCACCACATGCATaGCTGGTGCTTAAGGAGCCCAGAAGAGGACGTCAG | + |
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Preference number: 3 (lower is better) Translates to: RCIWIFECAPHA*LVLKEPRRGRQ Trigger: CTGACGTCCTCTTCTGGGCTCCTTAAGCACCAGGCATGCATGTGGTGCACATTCAAAGATCCAGATACAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR CCA 72 bp | GTTGTGAGCTCATCTGTGGGTCCTAGGAAGCAAACTTaGGTTCTCTACAAGAGCAGCAGGACTCTTGACTGC | + |
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Preference number: 3 (lower is better) Translates to: VVSSSVGPRKQT*VLYKSSRTLDC Trigger: GCAGTCAAGAGTCCTGCTGCTCTTGTAGAGAACCCAAGTTTGCTTCCTAGGACCCACAGATGAGCTCACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR CCA 72 bp | GTATCTGGATCTTTGAATGTGCACCACATGCATGCCTaGTGCTTAAGGAGCCCAGAAGAGGACGTCAGATCT | + |
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Preference number: 3 (lower is better) Translates to: VSGSLNVHHMHA*CLRSPEEDVRS Trigger: AGATCTGACGTCCTCTTCTGGGCTCCTTAAGCACCAGGCATGCATGTGGTGCACATTCAAAGATCCAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR TCA 72 bp | AAAGGCATCCAAGGTGGCACTAACTGCTTCCTATCTTaGAGATGTTCAGGGCACTCATCCCTAACACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: KGIQGGTNCFLS*RCSGHSSLTPA Trigger: TGCTGGTGTTAGGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGATGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCACACCAGCATCTCTGTaGGAGTATACTTCCTACATC | + |
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Preference number: 3 (lower is better) Translates to: SKVALTASYLEDVQGTHPTPASL*EYTSYI Trigger: GATGTAGGAAGTATACTCCAACAGAGATGCTGGTGT...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR TCA 72 bp | TGGGTTCTCTACAAGAGCAGCAGGACTCTTGACTGCTaGGCCTTTTCTCTCAGACTTGAGACCATTAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: WVLYKSSRTLDC*AFSLRLETIKF Trigger: AAACTTAATGGTCTCAAGTCTGAGAGAAAAGGCTCAGCAGTCAAGAGTCCTGCTGCTCTTGTAGAGAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR TCA 72 bp | TCTTCTCAGTCAGTGATCAGTCTTGGCCAGTATAACTaGGGGATTCTTGGTGCAAAGAGAACCAGAGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: SSQSVISLGQYN*GILGAKRTRVV Trigger: TACAACTCTGGTTCTCTTTGCACCAAGAATCCCTCAGTTATACTGGCCAAGACTGATCACTGACTGAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CAA 90 bp | TGTGACTATGCAGGCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTATAACTGAGGGATTCTaGGTGCAAAGAGAACCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CDYAGFAAEVYVGHVPLLITEGF*VQREPE Trigger: CTCTGGTTCTCTTTGCACCAAGAATCCCTCAGTTAT...AAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGCCTGCATAGTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR GCA 72 bp | AACCTTCAGCTGAGGGATCCACTGGGTAGTGGATTGTaGTATCTGTATCCAACAATCCTTTGTGAAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: NLQLRDPLGSGL*YLYPTILCENV Trigger: AACATTTTCACAAAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTGAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR CCA 72 bp | CTCCTGCACATATGTCTGTGTACCACATCCATGCCTTaGGCCTTGGATGTTAAAATAGAATGTCAGATTCTT | + |
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Preference number: 3 (lower is better) Translates to: LLHICLCTTSMP*ALDVKIECQIL Trigger: AAGAATCTGACATTCTATTTTAACATCCAAGGCCCAAGGCATGGATGTGGTACACAGACATATGTGCAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTTGTTCCTTTCCTGTTTACTaGATCTCAAGTCAAACTCTT | + |
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Preference number: 3 (lower is better) Translates to: LRDPLGSGLCYLYPTILCSFPVY*ISSQTL Trigger: AAGAGTTTGACTTGAGATCAAGTAAACAGGAAAGGA...ACAAAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCAGCTGTGGCCACATTTaGTCATGTATGCCTCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: QGYLDQFLVDLEIFATYASCGHI*SCMPPQ Trigger: TTGAGGAGGCATACATGACAAAATGTGGCCACAGCT...GGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195554.6 |
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| CDS-3UTR GCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCTGCCGAGGCTGGAGCTaGTCCCTCCAACGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SKVALTASYLEDVQGTHPCRGWS*SLQRRR Trigger: GCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCA...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR TCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCTGTCCTCGTAGGAGTTaGGGAGCCCGTTACAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: SKVALTASYLEDVQGTHPCPRRS*GARYKA Trigger: CGCTTTGTAACGGGCTCCTCAACTCCTACGAGGACA...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR GCA 90 bp | GGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCCATTGCCGAGGCTGGAGCTaGTCCCTCCAACGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GYLDQFLVDLEIFATYAHCRGWS*SLQRRR Trigger: GCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCA...ATGGGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
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| CDS-3UTR CCA 90 bp | CTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTTGTCAGCCGAAAGCCAGATaGTACCTGGAGGAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRDPLGSGLCYLYPTILCQPKAR*YLEEGL Trigger: CAGCCCCTCCTCCAGGTACCATCTGGCTTTCGGCTG...ACAAAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR GCA 90 bp | TGGCCAAATCAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCTGCCGAGGCTGGAGCTaGTCCCTCCAACGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: WPNQGYLDQFLVDLEIFACRGWS*SLQRRR Trigger: GCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCA...GGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTGATTTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAGCCAGAACATTCTGTATAACCCATAAGTGCAACTTCTTCAAAAGAGCTTCCTACTGCTACTaGCGAGGCTGGAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PAPARTFCITHKCNFFKRASYCY*RGWSCS Trigger: GGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGC...TCTTTTGAAGAAGTTGCACTTATGGGTTATACAGAATGTTCTGGCTGGGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR GCA 90 bp | CAGCTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTACCTATGCCCATTGGTaGTACTCACTGAGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QLRDPLGSGLCYLYPTILTYAHW*YSLSGP Trigger: TGGACCACTCAGTGAGTAGCACCAATGGGCATAGGT...AAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR GCA 90 bp | GGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCCATGCTTCCTACTGCTACTaGCGAGGCTGGAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GYLDQFLVDLEIFATYAHASYCY*RGWSCS Trigger: GGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGC...ATGGGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
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| CDS-3UTR GCA 90 bp | TGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGATTGGAGGTCGCTTCCTACTaGTACTGCCGAGGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CSRSLCWTCTIALVLLGLEVASY*YCRGWS Trigger: GCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTC...CAATCCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR GCA 90 bp | CAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCGAGGTCGCTTCCTACTaGTACTGCCGAGGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QGYLDQFLVDLEIFATYAEVASY*YCRGWS Trigger: GCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTC...GGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAGCCAGAACATTCTGTATAACCCATAAGTGCAACTTCTTCAAAAGAGCCACCTATGCCCATTaGTGCTACTCACTGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PAPARTFCITHKCNFFKRATYAH*CYSLSG Trigger: ACCACTCAGTGAGTAGCACCAATGGGCATAGGTGGC...TCTTTTGAAGAAGTTGCACTTATGGGTTATACAGAATGTTCTGGCTGGGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR TCA 90 bp | TGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGATTGACCTGGAGGAGGGGCTaGACTTCACACAGCACACGT | + |
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Preference number: 4 (lower is better) Translates to: CSRSLCWTCTIALVLLGLTWRRG*TSHSTR Trigger: ACGTGTGCTGTGTGAAGTTCAGCCCCTCCTCCAGGT...CAATCCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR GCA 90 bp | TGGCCAAATCAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCGAGGTCGCTTCCTACTaGTACTGCCGAGGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: WPNQGYLDQFLVDLEIFAEVASY*YCRGWS Trigger: GCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTC...GGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTGATTTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
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| CDS-3UTR CCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCACACTTAGTTCCTTCTaGATCTGCTCCAATTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SKVALTASYLEDVQGTHPTLSSF*ICSNCS Trigger: AGAGCAATTGGAGCAGATCCAGAAGGAACTAAGTGT...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
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| CDS-3UTR TCA 90 bp | CAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCTGTCCTCGTAGGAGTTaGGGAGCCCGTTACAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QGYLDQFLVDLEIFATYACPRRS*GARYKA Trigger: CGCTTTGTAACGGGCTCCTCAACTCCTACGAGGACA...GGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS-3UTR TCA 90 bp | GGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCCATTGTCCTCGTAGGAGTTaGGGAGCCCGTTACAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GYLDQFLVDLEIFATYAHCPRRS*GARYKA Trigger: CGCTTTGTAACGGGCTCCTCAACTCCTACGAGGACA...ATGGGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS-3UTR TCA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGCTGTGCTATCTTCACTaGCAGGAGAGTAGAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGLCYLH*QESRGH Trigger: GTGGCCTCTACTCTCCTGTCAGTGAAGATAGCACAG...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR TCA 90 bp | CAGCTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTAGTTCTACTGTCATCTaGGATACGAGACATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRDPLGSGLCYLYPTILSSTVI*DTRHPC Trigger: ACAAGGATGTCTCGTATCTCAGATGACAGTAGAACT...AAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR GCA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCGTCTTGATGCTAATGTaGTGTTATACCAAGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKVALTASYLEDVQGTHPVLMLM*CYTKAV Trigger: AACAGCCTTGGTATAACAGCACATTAGCATCAAGAC...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGGCACACGTTAGCCTTTaGCTCAATGCTCGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGAHVSL*LNARHR Trigger: TCTGTGGCGAGCATTGAGGCAAAGGCTAACGTGTGC...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTTGTCTTGGCATAAGACACTaGTTTTCGGTGTCCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRDPLGSGLCYLYPTILCLGIRH*FSVSLE Trigger: TTCAAGGGACACCGAAAAGCAGTGTCTTATGCCAAG...ACAAAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR GCA 90 bp | CAGCTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTTGGATCTGCTCCAATTaGTCTCTCTTATTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLRDPLGSGLCYLYPTILWICSN*SLLFLL Trigger: AAGGAGAAATAAGAGAGAGCAATTGGAGCAGATCCA...AAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR GCA 90 bp | AATTCCACCTATTTTCTAGCCATGCCCATTTGTCTACTAACGATAGTAGCTACAGTGGACACAGTGATCTaGACAGCCGAAAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSTYFLAMPICLLTIVATVDTVI*TAESQM Trigger: CATCTGGCTTTCGGCTGTGCAGATCACTGTGTCCAC...TGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCACCACTTACAAACTTaGCATAAGACACTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KASKVALTASYLEDVQGTHHLQT*HKTLLF Trigger: GAAAAGCAGTGTCTTATGCCAAGTTTGTAAGTGGTG...AGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CCA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGCAGCAATCAGCACATTaGACTCCCCGTCTGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGQQSAH*TPRLIV Trigger: CACTATCAGACGGGGAGTCCAATGTGCTGATTGCTG...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| 3UTR CAA 72 bp | TGTTCAGGGCACTCATCCCTAACACCAGCATCTCTGTaGGAGTATACTTCCTACATCTTCACAAATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: CSGHSSLTPASL*EYTSYIFTNGH Trigger: ATGTCCATTTGTGAAGATGTAGGAAGTATACTCCAACAGAGATGCTGGTGTTAGGGATGAGTGCCCTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR TCA 90 bp | TGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGATTGGGCTGTTTCTTTGTCTaGGAGGTCCCACTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CSRSLCWTCTIALVLLGLGCFFV*EVPLKP Trigger: AGGTTTCAGTGGGACCTCTCAGACAAAGAAACAGCC...CAATCCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR TCA 90 bp | CACCTATTTTCTAGCCATGCCCATTTGTCTACTAACGATAGTAGCTACATCCCTCTTCAAAATGAGCAGTaGGTCGCTTTCGTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLFSSHAHLSTNDSSYIPLQNEQ*VAFVLM Trigger: CATCAAGACGAAAGCGACTCACTGCTCATTTTGAAG...AGGGATGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGGACAGACGAAGTCGTTaGTTTTGTCCTCGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGDRRSR*FCPRRS Trigger: ACTCCTACGAGGACAAAAGCAACGACTTCGTCTGTC...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| 3UTR CAA 72 bp | AGTAACCTTCAGCTGAGGGATCCACTGGGTAGTGGATaGTGCTATCTGTATCCAACAATCCTTTGTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNLQLRDPLGSG*CYLYPTILCEN Trigger: ATTTTCACAAAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTGAAGGTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR GCA 90 bp | CAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCGACAGACGAAGTCGTTaGTTTTGTCCTCGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGYLDQFLVDLEIFATYADRRSR*FCPRRS Trigger: ACTCCTACGAGGACAAAAGCAACGACTTCGTCTGTC...GGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS-3UTR CCA 90 bp | AATTCCACCTATTTTCTAGCCATGCCCATTTGTCTACTAACGATAGTAGCTACATCATATCAAAGCAGATaGGACAGACGAAGTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSTYFLAMPICLLTIVATSYQSR*DRRSRC Trigger: GCAACGACTTCGTCTGTCCCATCTGCTTTGATATGA...TGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTGGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CCA 90 bp | CAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCTCATATCAAAGCAGATaGGACAGACGAAGTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGYLDQFLVDLEIFATYASYQSR*DRRSRC Trigger: GCAACGACTTCGTCTGTCCCATCTGCTTTGATATGA...GGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| 3UTR CAA 72 bp | AGTTTGAAATTCCACCTATTTTCTAGCCATGCCCATTaGTCTACTAACGATAGTAGCTACATCCCTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: SLKFHLFSSHAH*STNDSSYIPDT Trigger: GGTATCAGGGATGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTGGAATTTCAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| 3UTR CAA 72 bp | CACATATGTCTGTGTACCACATCCATGCCTTGGGCCTaGGATGTTAAAATAGAATGTCAGATTCTTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HICLCTTSMPWA*DVKIECQILWN Trigger: ATTCCAAAGAATCTGACATTCTATTTTAACATCCAAGGCCCAAGGCATGGATGTGGTACACAGACATATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR TCA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGTTGGACAAGCATTCTTaGAATTCATCTAACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGLDKHS*NSSNWL Trigger: AAGCCAGTTAGATGAATTTCAAGAATGCTTGTCCAA...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| 3UTR CAA 72 bp | AATGTGACTATGCAGGCTTTGCAGCAGAAGTTTATGTaGGACATGTACCATTGCTTTAGTTTTGTTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NVTMQALQQKFM*DMYHCFSFVGI Trigger: AATCCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGCCTGCATAGTCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CCA 90 bp | CAAGGTTATCTTGATCAGTTCCTAGTAGATCTTGAAATATTTGCCACCTATGCCCATTCACAAAAGCTGTaGCCACATTTTGTCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QGYLDQFLVDLEIFATYAHSQKL*PHFVMY Trigger: ATACATGACAAAATGTGGCCACAGCTTTTGTGAATG...GGCATAGGTGGCAAATATTTCAAGATCTACTAGGAACTGATCAAGATAACCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195800.6 |
||
| CDS CCA 90 bp | AAAGCGGGACGAGCAGAGGTCGCTTCCTACTGCTACTGCCGAGGCTaGAGCTGCTCCCTCCAACGCCGGCGCTGGGCCTGGCCGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAGRAEVASYCYCRG*SCSLQRRRWAWPRS Trigger: GCTGCGCGGCCAGGCCCAGCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTCTGCTCGTCCCGCTTT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS GCA 90 bp | GCCCGTTACAAAGCGGGACGAGCAGAGGTCGCTTCCTACTGCTACTaGCGAGGCTGGAGCTGCTCCCTCCAACGCCGGCGCTGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARYKAGRAEVASYCY*RGWSCSLQRRRWAW Trigger: CCAGGCCCAGCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTCTGCTCGTCCCGCTTTGTAACGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS TCA 90 bp | AGCAGATGGGACAGACGAAGTCGTTGCTTTTGTCCTCGTAGGAGTTaGGGAGCCCGTTACAAAGCGGGACGAGCAGAGGTCGCTTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRWDRRSRCFCPRRS*GARYKAGRAEVASY Trigger: GTAGGAAGCGACCTCTGCTCGTCCCGCTTTGTAACGGGCTCCTCAACTCCTACGAGGACAAAAGCAACGACTTCGTCTGTCCCATCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAGCCAGAACATTCTGTATAACCCATAAGTGCAACTTCTTCAAAAGATGCCACCTATGCCCATaGGTGCTACTCACTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPARTFCITHKCNFFKRCHLCP*VLLTEW Trigger: CCACTCAGTGAGTAGCACCAATGGGCATAGGTGGCA...TCTTTTGAAGAAGTTGCACTTATGGGTTATACAGAATGTTCTGGCTGGGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCACCACAGCTTCACTTTaGCATCATCAGAACCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKVALTASYLEDVQGTHPTTASL*HHQNLK Trigger: CTTCAGGTTCTGATGATGCAAAAGTGAAGCTGTGGT...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | CAGCTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTATGCTCGCCACAGAATaGTCTAAATTGGTAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLRDPLGSGLCYLYPTILMLATE*SKLVDH Trigger: GTGGTCTACCAATTTAGACAATTCTGTGGCGAGCAT...AAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | TCCAAGGTGGCACTAACTGCTTCCTATCTTGAAGATGTTCAGGGCACTCATCCCTTAGTTGGCTGTCTGTaGAGGCTGAGACAATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKVALTASYLEDVQGTHPLVGCL*RLRQFL Trigger: AAGAAATTGTCTCAGCCTCAACAGACAGCCAACTAA...GGGATGAGTGCCCTGAACATCTTCAAGATAGGAAGCAGTTAGTGCCACCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | CACCTATTTTCTAGCCATGCCCATTTGTCTACTAACGATAGTAGCTACATCCCTGCAGCAATCAGCACATaGGACTCCCCGTCTGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLFSSHAHLSTNDSSYIPAAIST*DSPSDS Trigger: ACTATCAGACGGGGAGTCCAATGTGCTGATTGCTGC...AGGGATGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTTGTCTGGATCTGCTCCAATaGCTCTCTCTTATTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRDPLGSGLCYLYPTILCLDLLQ*LSLISP Trigger: AGGAGAAATAAGAGAGAGCAATTGGAGCAGATCCAG...ACAAAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | CAGCTGAGGGATCCACTGGGTAGTGGATTGTGCTATCTGTATCCAACAATCCTTAACGGTCTTACTGAGTaGTATCGAGTAAACTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLRDPLGSGLCYLYPTILNGLTE*YRVNLD Trigger: GTCCAAGTTTACTCGATACAACTCAGTAAGACCGTT...AAGGATTGTTGGATACAGATAGCACAATCCACTACCCAGTGGATCCCTCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | GCTTTGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGAGCTGTGGCCACATTTaGTCATGTATGCCTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALQQKFMLDMYHCFSFVGSCGHI*SCMPPQ Trigger: TTGAGGAGGCATACATGACAAAATGTGGCCACAGCT...CCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | CACCTATTTTCTAGCCATGCCCATTTGTCTACTAACGATAGTAGCTACATCCCTAATTCCAACATGAGGTaGACATTGGCCAAATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLFSSHAHLSTNDSSYIPNSNMR*TLAKSR Trigger: CCTTGATTTGGCCAATGTCAACCTCATGTTGGAATT...AGGGATGTAGCTACTATCGTTAGTAGACAAATGGGCATGGCTAGAAAATAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS-3UTR CAA 90 bp | TGCAGCAGAAGTTTATGTTGGACATGTACCATTGCTTTAGTTTTGTTGGGATTGAACATGAGGTTGACATaGGCCAAATCAAGGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: CSRSLCWTCTIALVLLGLNMRLT*AKSRLS Trigger: AGATAACCTTGATTTGGCCAATGTCAACCTCATGTT...CAATCCCAACAAAACTAAAGCAATGGTACATGTCCAACATAAACTTCTGCTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076894.11 |
||
| CDS GCA 72 bp | GAGGTCGCTTCCTACTGCTACTGCCGAGGCTGGAGCTaGTCCCTCCAACGCCGGCGCTGGGCCTGGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: EVASYCYCRGWS*SLQRRRWAWPR Trigger: GCGCGGCCAGGCCCAGCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS CCA 72 bp | CGAGCAGAGGTCGCTTCCTACTGCTACTGCCGAGGCTaGAGCTGCTCCCTCCAACGCCGGCGCTGGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RAEVASYCYCRG*SCSLQRRRWAW Trigger: CCAGGCCCAGCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTCTGCTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS GCA 72 bp | AAAGCGGGACGAGCAGAGGTCGCTTCCTACTGCTACTaGCGAGGCTGGAGCTGCTCCCTCCAACGCCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: KAGRAEVASYCY*RGWSCSLQRRR Trigger: GCGCCGGCGTTGGAGGGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTCTGCTCGTCCCGCTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS GCA 72 bp | CGTTACAAAGCGGGACGAGCAGAGGTCGCTTCCTACTaGTACTGCCGAGGCTGGAGCTGCTCCCTCCAACGC | + |
|
Preference number: 6 (lower is better) Translates to: RYKAGRAEVASY*YCRGWSCSLQR Trigger: GCGTTGGAGGGAGCAGCTCCAGCCTCGGCAGTAGCAGTAGGAAGCGACCTCTGCTCGTCCCGCTTTGTAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
||
| CDS TCA 72 bp | GACAGACGAAGTCGTTGCTTTTGTCCTCGTAGGAGTTaGGGAGCCCGTTACAAAGCGGGACGAGCAGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DRRSRCFCPRRS*GARYKAGRAEV Trigger: GACCTCTGCTCGTCCCGCTTTGTAACGGGCTCCTCAACTCCTACGAGGACAAAAGCAACGACTTCGTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076894.11 ENSMUST00000192215.6 ENSMUST00000195554.6 ENSMUST00000195800.6 |
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