Pregenerated sensors for COMTD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021773Ensembl transcript IDs: ENSMUST00000124549.9, ENSMUST00000177527.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTATGCGGTCAGATAAGGCCACAAGCCTTGGTGCCAGGGAGACCTaGAGGGAGGGAACCCTCCACCAAGTGAACGCTGGAAGAGGATGC | + |
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Preference number: 1 (lower is better) Translates to: TMRSDKATSLGARET*REGTLHQVNAGRGC Trigger: GCATCCTCTTCCAGCGTTCACTTGGTGGAGGGTTCCCTCCCTGCAGGTCTCCCTGGCACCAAGGCTTGTGGCCTTATCTGACCGCATAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 90 bp | TGCCAGGGAGACCTGCAGGGAGGGAACCCTCCACCAAGTGAACGCTaGAAGAGGATGCTCAGAAGGTCGCGTGTCCAGTACCTTTATTGT | + |
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Preference number: 1 (lower is better) Translates to: CQGDLQGGNPPPSER*KRMLRRSRVQYLYC Trigger: ACAATAAAGGTACTGGACACGCGACCTTCTGAGCATCCTCTTCCAGCGTTCACTTGGTGGAGGGTTCCCTCCCTGCAGGTCTCCCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 90 bp | GCATGCATCCCCTTCCTTCTGAGCCACGCTACAGAAAGTGGAGCCTaGGTAGATGGAAGCAACAGGCCAAGAGAGGAGAAAGTGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: ACIPFLLSHATESGA*VDGSNRPREEKVGT Trigger: GGTGCCCACTTTCTCCTCTCTTGGCCTGTTGCTTCCATCTACCCAGGCTCCACTTTCTGTAGCGTGGCTCAGAAGGAAGGGGATGCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 90 bp | CCCCTTCCTTCTGAGCCACGCTACAGAAAGTGGAGCCTGGGTAGATaGAAGCAACAGGCCAAGAGAGGAGAAAGTGGGCACCATTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: PLPSEPRYRKWSLGR*KQQAKRGESGHHSL Trigger: AAGAGAATGGTGCCCACTTTCTCCTCTCTTGGCCTGTTGCTTCCATCTACCCAGGCTCCACTTTCTGTAGCGTGGCTCAGAAGGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 90 bp | AGTGCACATCACTTGGGCCTTTCTTACCCCAGAGTGGCAAACCTGTaGTGTCCCAGAAACTGTCCTTTCTGCCTCAGTACAAAGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: SAHHLGLSYPRVANL*CPRNCPFCLSTKNF Trigger: AAAGTTCTTTGTACTGAGGCAGAAAGGACAGTTTCTGGGACACCACAGGTTTGCCACTCTGGGGTAAGAAAGGCCCAAGTGATGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR GCA 90 bp | TACCCCAGAGTGGCAAACCTGTGGTGTCCCAGAAACTGTCCTTTCTaGCTCAGTACAAAGAACTTTACCTTTCTTCTAGAGCAGCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: YPRVANLWCPRNCPF*LSTKNFTFLLEQQS Trigger: GCTTTGCTGCTCTAGAAGAAAGGTAAAGTTCTTTGTACTGAGGCAGAAAGGACAGTTTCTGGGACACCACAGGTTTGCCACTCTGGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR TCA 90 bp | GATAGGGTCTTCCCTTATATCCAAGCCTGTTGGAACTCTACTCAGTaGGTACAGCTAGGACAATTTATTAAAACTATGCGGTCAGATAAG | + |
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Preference number: 1 (lower is better) Translates to: DRVFPYIQACWNSTQ*VQLGQFIKTMRSDK Trigger: CTTATCTGACCGCATAGTTTTAATAAATTGTCCTAGCTGTACTCACTGAGTAGAGTTCCAACAGGCTTGGATATAAGGGAAGACCCTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 90 bp | TCACTTCTGAGGTGTAGTTTAAACTTGAGAGGACAGCTAAGAAAATaGGTACTTTGGGACTTACCCAATAGAAATGGTGCATGTTACTGC | + |
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Preference number: 1 (lower is better) Translates to: SLLRCSLNLRGQLRK*VLWDLPNRNGACYC Trigger: GCAGTAACATGCACCATTTCTATTGGGTAAGTCCCAAAGTACCCATTTTCTTAGCTGTCCTCTCAAGTTTAAACTACACCTCAGAAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGAGGGTTGGTGGTGTGTGGCAGGGACTCAGTTGTGGGCTCACACATCTGTTTCTTACCCCAGAGTaGCAAACCTGTGGTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PQRVGGVWQGLSCGLTHLFLTPE*QTCGVP Trigger: TGGGACACCACAGGTTTGCCACTCTGGGGTAAGAAA...CAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAACCCTCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR CCA 90 bp | CCATTCTCTTCTATTGACAGCGTTGAAAAGCTGAGCTGGGGTCTGGACCAGGCACCGTGCCAGCTTCCCTaGGGAGGTGGTGTGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: PFSSIDSVEKLSWGLDQAPCQLP*GGGVSQ Trigger: CTGTGACACACCACCTCCCCAGGGAAGCTGGCACGG...TGCCTGGTCCAGACCCCAGCTCAGCTTTTCAACGCTGTCAATAGAAGAGAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR TCA 90 bp | CCATTCTCTTCTATTGACAGCGTTGAAAAGCTGAGCTGGGGTCTGGACCAGGCATGTACTTGTGACTTGTaGAGAAGGGGTAGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: PFSSIDSVEKLSWGLDQACTCDL*RRGRAQ Trigger: CTGTGCCCTACCCCTTCTTCACAAGTCACAAGTACA...TGCCTGGTCCAGACCCCAGCTCAGCTTTTCAACGCTGTCAATAGAAGAGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR CCA 90 bp | GCTACAGAAAGTGGAGCCTGGGTAGATGGAAGCAACAGGCCAAGAGAGGAGAAAGGACAGCTAAGAAAATaGGTACTTTGGGACTTACCC | + |
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Preference number: 2 (lower is better) Translates to: ATESGAWVDGSNRPREEKGQLRK*VLWDLP Trigger: GGGTAAGTCCCAAAGTACCCATTTTCTTAGCTGTCC...TTTCTCCTCTCTTGGCCTGTTGCTTCCATCTACCCAGGCTCCACTTTCTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCGCCATCACCTGGGTGATATGTATTACCTAGTGATCCTGGTTGGAAAAGTATTAGGTCCTGTAGTCTaGGCTTCCACTGCACACAAG | + |
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Preference number: 2 (lower is better) Translates to: LRHHLGDMYYLVILVGKVLGPVV*ASTAHK Trigger: CTTGTGTGCAGTGGAAGCCCAGACTACAGGACCTAA...TACTTTTCCAACCAGGATCACTAGGTAATACATATCACCCAGGTGATGGCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR TCA 72 bp | CCAGGGAGACCTGCAGGGAGGGAACCCTCCACCAAGTaGACGCTGGAAGAGGATGCTCAGAAGGTCGCGTGT | + |
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Preference number: 3 (lower is better) Translates to: PGRPAGREPSTK*TLEEDAQKVAC Trigger: ACACGCGACCTTCTGAGCATCCTCTTCCAGCGTTCACTTGGTGGAGGGTTCCCTCCCTGCAGGTCTCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR GCA 72 bp | CCAGCCAACCTTAGGTCCTGTAGTCTGGGCTTCCACTaGACACAAGTTAGGCTGGGGAGGCTTCAGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PANLRSCSLGFH*TQVRLGRLQPC Trigger: ACAGGGCTGAAGCCTCCCCAGCCTAACTTGTGTGCAGTGGAAGCCCAGACTACAGGACCTAAGGTTGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | ATCCTGGTTGGAAAAGTAGGACCGTGCCAGCTTCCCTaGGGAGGTGGTGTGTCACAGGTGAGAGGTGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: ILVGKVGPCQLP*GGGVSQVRGEC Trigger: ACACTCACCTCTCACCTGTGACACACCACCTCCCCAGGGAAGCTGGCACGGTCCTACTTTTCCAACCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | CCATTCTCTTCTATTGACAGCGTTGAAAAGCTGAGCTaGGGTCTGGACCAGGCAGCCCCCTTCGCCATCACC | + |
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Preference number: 3 (lower is better) Translates to: PFSSIDSVEKLS*GLDQAAPFAIT Trigger: GGTGATGGCGAAGGGGGCTGCCTGGTCCAGACCCCAGCTCAGCTTTTCAACGCTGTCAATAGAAGAGAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | CCAGAGGGTTGGTGGTGTGTGGCAGGGACTCAGTTGTaGGCTCACACATCTGTACTTGTAGCAGCTGCTAAG | + |
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Preference number: 3 (lower is better) Translates to: PEGWWCVAGTQL*AHTSVLVAAAK Trigger: CTTAGCAGCTGCTACAAGTACAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAACCCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | TCTGAGCCACGCTACAGAAAGTGGAGCCTGGGTAGATaGAAGCAACAGGCCAAGAGAGGAGAAAGTGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: SEPRYRKWSLGR*KQQAKRGESGH Trigger: GTGCCCACTTTCTCCTCTCTTGGCCTGTTGCTTCCATCTACCCAGGCTCCACTTTCTGTAGCGTGGCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR GCA 72 bp | GAGGGAACCCTCCACCAAGTGAACGCTGGAAGAGGATaGTCAGAAGGTCGCGTGTCCAGTACCTTTATTGTC | + |
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Preference number: 3 (lower is better) Translates to: EGTLHQVNAGRG*SEGRVSSTFIV Trigger: GACAATAAAGGTACTGGACACGCGACCTTCTGAGCATCCTCTTCCAGCGTTCACTTGGTGGAGGGTTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | CCCTTCCTTCTGAGCCACGCTACAGAAAGTGGAGCCTaGGTAGATGGAAGCAACAGGCCAAGAGAGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PFLLSHATESGA*VDGSNRPREEK Trigger: TTTCTCCTCTCTTGGCCTGTTGCTTCCATCTACCCAGGCTCCACTTTCTGTAGCGTGGCTCAGAAGGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | ATGCATCCCCTTCCTTCTGAGCCACGCTACAGAAAGTaGAGCCTGGGTAGATGGAAGCAACAGGCCAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: MHPLPSEPRYRK*SLGRWKQQAKR Trigger: TCTCTTGGCCTGTTGCTTCCATCTACCCAGGCTCCACTTTCTGTAGCGTGGCTCAGAAGGAAGGGGATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | GAGCAGCAAAGCACCAGGCCTCAGGTCAATAAAGGTTaGCTCCTTATAGTGTCCCCCAAAAGGACAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: EQQSTRPQVNKG*LLIVSPKRTVL Trigger: CAGCACTGTCCTTTTGGGGGACACTATAAGGAGCCAACCTTTATTGACCTGAGGCCTGGTGCTTTGCTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | CACTTGGGCCTTTCTTACCCCAGAGTGGCAAACCTGTaGTGTCCCAGAAACTGTCCTTTCTGCCTCAGTACA | + |
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Preference number: 3 (lower is better) Translates to: HLGLSYPRVANL*CPRNCPFCLST Trigger: TGTACTGAGGCAGAAAGGACAGTTTCTGGGACACCACAGGTTTGCCACTCTGGGGTAAGAAAGGCCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR CAA 90 bp | CACTTCAAAATGGATTGGACCAGGTCCCCTGTGTGCACCTCAGTATGTACTTGTATAAGGCCACAAGCCTaGGTGCCAGGGAGACCTGCA | + |
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Preference number: 3 (lower is better) Translates to: HFKMDWTRSPVCTSVCTCIRPQA*VPGRPA Trigger: TGCAGGTCTCCCTGGCACCAAGGCTTGTGGCCTTAT...ACAAGTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCATTTTGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTCTAGAGCAGCAAAGCACCAGGCCTCAGGTCAATAAAGGTTGGCTCCTTTGTCTGCTTTGCACCTaGGCCATCAGTCTCCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FLLEQQSTRPQVNKGWLLCLLCT*AISLLP Trigger: AGGGAGGAGACTGATGGCCAAGGTGCAAAGCAGACA...AAGGAGCCAACCTTTATTGACCTGAGGCCTGGTGCTTTGCTGCTCTAGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | GGGCTACCAGTGCATCAAAGGCACTTCAAAATGGATTaGACCAGGTCCCCTGTGTGCACCTCAGTATGTACT | + |
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Preference number: 3 (lower is better) Translates to: GLPVHQRHFKMD*TRSPVCTSVCT Trigger: AGTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCATTTTGAAGTGCCTTTGATGCACTGGTAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | CATGTGGGCTACCAGTGCATCAAAGGCACTTCAAAATaGATTGGACCAGGTCCCCTGTGTGCACCTCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: HVGYQCIKGTSK*IGPGPLCAPQY Trigger: ATACTGAGGTGCACACAGGGGACCTGGTCCAATCCATTTTGAAGTGCCTTTGATGCACTGGTAGCCCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGTGGTGTGTGGCAGGGACTCAGTTGTGGGCTCACACATCTGTACTTGTAGCTTATATCCAAGCCTGTaGGAACTCTACTCAGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: LVVCGRDSVVGSHICTCSLYPSL*ELYSVS Trigger: ACTCACTGAGTAGAGTTCCAACAGGCTTGGATATAA...GCTACAAGTACAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR TCA 72 bp | ACAGTGCTGCAAAAGCTTCAAGTTCCTGAGGTTTCTTaGATGAGGTTGGCTTCCCACTCTGTCTGCTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: TVLQKLQVPEVS*MRLASHSVCFA Trigger: TGCAAAGCAGACAGAGTGGGAAGCCAACCTCATTCAAGAAACCTCAGGAACTTGAAGCTTTTGCAGCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR TCA 72 bp | TTCCCTTATATCCAAGCCTGTTGGAACTCTACTCAGTaGGTACAGCTAGGACAATTTATTAAAACTATGCGG | + |
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Preference number: 3 (lower is better) Translates to: FPYIQACWNSTQ*VQLGQFIKTMR Trigger: CCGCATAGTTTTAATAAATTGTCCTAGCTGTACTCACTGAGTAGAGTTCCAACAGGCTTGGATATAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CCA 72 bp | TTAAACTTGAGAGGACAGCTAAGAAAATGGGTACTTTaGGACTTACCCAATAGAAATGGTGCATGTTACTGC | + |
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Preference number: 3 (lower is better) Translates to: LNLRGQLRKWVL*DLPNRNGACYC Trigger: GCAGTAACATGCACCATTTCTATTGGGTAAGTCCCAAAGTACCCATTTTCTTAGCTGTCCTCTCAAGTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR CCA 90 bp | GGGAACCCTCCACCAAGTGAACGCTGGAAGAGGATGCTCAGAAGGTCGCGTGTCCTGCCTGCTTCCACATaGGCCGTCCCAGCTTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GNPPPSERWKRMLRRSRVLPAST*AVPASG Trigger: CCCCGAAGCTGGGACGGCCCATGTGGAAGCAGGCAG...GACACGCGACCTTCTGAGCATCCTCTTCCAGCGTTCACTTGGTGGAGGGTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR TCA 90 bp | TTGGTGGTGTGTGGCAGGGACTCAGTTGTGGGCTCACACATCTGTACTTGTAGCCCAGGGGCAGGAGGCTaGTGTAGACCCTGGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LVVCGRDSVVGSHICTCSPGAGG*CRPWRP Trigger: GGGACGCCAGGGTCTACATCAGCCTCCTGCCCCTGG...GCTACAAGTACAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTGTGTGGCAGGGACTCAGTTGTGGGCTCACACATCTGTACTTGTAGCCTCCGCAGCGCCGGGTaGTCTCTCATGGAGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LVVCGRDSVVGSHICTCSLRSAG*SLMERL Trigger: GAGCCGCTCCATGAGAGAGCACCCGGCGCTGCGGAG...GCTACAAGTACAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR TCA 90 bp | TTGGTGGTGTGTGGCAGGGACTCAGTTGTGGGCTCACACATCTGTACTTGTAGCGTCTTGTTCCTGGGCTaGGGCTGCAGCACTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LVVCGRDSVVGSHICTCSVLFLG*GCSTSP Trigger: CGGAGAAGTGCTGCAGCCTCAGCCCAGGAACAAGAC...GCTACAAGTACAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR GCA 90 bp | CCATTCTCTTCTATTGACAGCGTTGAAAAGCTGAGCTGGGGTCTGGACCAGGCACAGCTTCGGGGGCTCTaGGTCAACCTCGCAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PFSSIDSVEKLSWGLDQAQLRGL*VNLAGH Trigger: GTGACCTGCGAGGTTGACGCAGAGCCCCCGAAGCTG...TGCCTGGTCCAGACCCCAGCTCAGCTTTTCAACGCTGTCAATAGAAGAGAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR GCA 90 bp | GGCAGCCCCCTTCGCCATCACCTGGGTGATATGTATTACCTAGTGATCCTGGTTTGCTCCACTTCTGCCTaGTTCCACATGGGCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GSPLRHHLGDMYYLVILVCSTSA*FHMGRP Trigger: GGGACGGCCCATGTGGAAGCAGGCAGAAGTGGAGCA...AACCAGGATCACTAGGTAATACATATCACCCAGGTGATGGCGAAGGGGGCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CAA 72 bp | TCCCCAGAGGGTTGGTGGTGTGTGGCAGGGACTCAGTaGTGGGCTCACACATCTGTACTTGTAGCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPEGWWCVAGTQ*WAHTSVLVAAA Trigger: AGCAGCTGCTACAAGTACAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAACCCTCTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR GCA 90 bp | CACTTCAAAATGGATTGGACCAGGTCCCCTGTGTGCACCTCAGTATGTACTTGTGAATCCCCCTGCGGCTaGTCCAGGGTCAGCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: HFKMDWTRSPVCTSVCTCESPCG*SRVSSR Trigger: GCGACTGCTGACCCTGGAGCAGCCGCAGGGGGATTC...ACAAGTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCATTTTGAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR GCA 90 bp | CACTTCAAAATGGATTGGACCAGGTCCCCTGTGTGCACCTCAGTATGTACTTGTGTCTGCAGGGCGGGCTaGAGCCGAAGGTCGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: HFKMDWTRSPVCTSVCTCVCRAG*SRRSIF Trigger: GAAGATCGACCTTCGGCTGCAGCCCGCCCTGCAGAC...ACAAGTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCATTTTGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR CCA 90 bp | CACTTCAAAATGGATTGGACCAGGTCCCCTGTGTGCACCTCAGTATGTACTTGTGGGATTGTCCTCAGGTaGCAGCAGGCGCTCTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: HFKMDWTRSPVCTSVCTCGIVLR*QQALLP Trigger: CGGCAAGAGCGCCTGCTGCCACCTGAGGACAATCCC...ACAAGTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCATTTTGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR CCA 90 bp | TGGATTGGACCAGGTCCCCTGTGTGCACCTCAGTATGTACTTGTGACTTGTGAACCGGGTGCTCTCTCATaGAGCGGCTCAGCAGATACT | + |
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Preference number: 4 (lower is better) Translates to: WIGPGPLCAPQYVLVTCEPGALS*SGSADT Trigger: AGTATCTGCTGAGCCGCTCCATGAGAGAGCACCCGG...TTCACAAGTCACAAGTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR CCA 90 bp | TGGATTGGACCAGGTCCCCTGTGTGCACCTCAGTATGTACTTGTGACTTGTGAAGTTCACAGGTCATCATaGAATCCCCCTGCGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: WIGPGPLCAPQYVLVTCEVHRSS*NPPAAA Trigger: AGCAGCCGCAGGGGGATTCCATGATGACCTGTGAAC...TTCACAAGTCACAAGTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR GCA 90 bp | TTTCTTCTAGAGCAGCAAAGCACCAGGCCTCAGGTCAATAAAGGTTGGCTCCTTCGGCTCAGCAGATACTaGCACAGGGGATTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: FLLEQQSTRPQVNKGWLLRLSRY*HRGLSS Trigger: TGAGGACAATCCCCTGTGGCAGTATCTGCTGAGCCG...AAGGAGCCAACCTTTATTGACCTGAGGCCTGGTGCTTTGCTGCTCTAGAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR CCA 90 bp | TTTCTTCTAGAGCAGCAAAGCACCAGGCCTCAGGTCAATAAAGGTTGGCTCCTTAGGTTGGCCAGAAGCTaGGCCTGTTCACAGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: FLLEQQSTRPQVNKGWLLRLARS*ACSQVI Trigger: GATGACCTGTGAACAGGCCCAGCTTCTGGCCAACCT...AAGGAGCCAACCTTTATTGACCTGAGGCCTGGTGCTTTGCTGCTCTAGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| 3UTR CAA 72 bp | TGGGCTACCAGTGCATCAAAGGCACTTCAAAATGGATaGGACCAGGTCCCCTGTGTGCACCTCAGTATGTAC | + |
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Preference number: 4 (lower is better) Translates to: WATSASKALQNG*DQVPCVHLSMY Trigger: GTACATACTGAGGTGCACACAGGGGACCTGGTCCAATCCATTTTGAAGTGCCTTTGATGCACTGGTAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR GCA 90 bp | CTGGAAGAGGATGCTCAGAAGGTCGCGTGTCCAGTACCTTTATTGTCAGGTTTACGAAGGTCGATCTTCTaGTCCACTTCTGCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LEEDAQKVACPVPLLSGLRRSIF*STSACF Trigger: GAAGCAGGCAGAAGTGGAGCAGAAGATCGACCTTCG...TAAACCTGACAATAAAGGTACTGGACACGCGACCTTCTGAGCATCCTCTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR CCA 90 bp | TTTCTTCTAGAGCAGCAAAGCACCAGGCCTCAGGTCAATAAAGGTTGGCTCCTTCAACAGTCTTGTTCCTaGGCTGAGGCTGCAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: FLLEQQSTRPQVNKGWLLQQSCS*AEAAAL Trigger: AAGTGCTGCAGCCTCAGCCCAGGAACAAGACTGTTG...AAGGAGCCAACCTTTATTGACCTGAGGCCTGGTGCTTTGCTGCTCTAGAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS GCA 90 bp | CACTTCTGCCTGCTTCCACATGGGCCGTCCCAGCTTCGGGGGCTCTaGGTCAACCTCGCAGGTCACCACGCGGCCAGCCTCCGGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: HFCLLPHGPSQLRGL*VNLAGHHAASLRKR Trigger: GCGCTTCCGGAGGCTGGCCGCGTGGTGACCTGCGAGGTTGACGCAGAGCCCCCGAAGCTGGGACGGCCCATGTGGAAGCAGGCAGAAGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS GCA 90 bp | TGCGGCTGCTCCAGGGTCAGCAGTCGCAGGCTCCGCAGCGCCGGGTaGTCTCTCATGGAGCGGCTCAGCAGATACTGCCACAGGGGATTG | + |
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Preference number: 5 (lower is better) Translates to: CGCSRVSSRRLRSAG*SLMERLSRYCHRGL Trigger: CAATCCCCTGTGGCAGTATCTGCTGAGCCGCTCCATGAGAGAGCACCCGGCGCTGCGGAGCCTGCGACTGCTGACCCTGGAGCAGCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS CCA 90 bp | GCCGCGCCAGGTTGGCCAGAAGCTGGGCCTGTTCACAGGTCATCATaGAATCCCCCTGCGGCTGCTCCAGGGTCAGCAGTCGCAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAPGWPEAGPVHRSS*NPPAAAPGSAVAGS Trigger: GGAGCCTGCGACTGCTGACCCTGGAGCAGCCGCAGGGGGATTCCATGATGACCTGTGAACAGGCCCAGCTTCTGGCCAACCTGGCGCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS CCA 90 bp | CCAGGGTCAGCAGTCGCAGGCTCCGCAGCGCCGGGTGCTCTCTCATaGAGCGGCTCAGCAGATACTGCCACAGGGGATTGTCCTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PGSAVAGSAAPGALS*SGSADTATGDCPQV Trigger: CACCTGAGGACAATCCCCTGTGGCAGTATCTGCTGAGCCGCTCCATGAGAGAGCACCCGGCGCTGCGGAGCCTGCGACTGCTGACCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS GCA 90 bp | GCCTCGCCCGCCGCTAGGAGCTCATCCAATGTCTGCAGGGCGGGCTaGAGCCGAAGGTCGATCTTCTGCTCCACTTCTGCCTGCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: ASPAARSSSNVCRAG*SRRSIFCSTSACFH Trigger: GTGGAAGCAGGCAGAAGTGGAGCAGAAGATCGACCTTCGGCTGCAGCCCGCCCTGCAGACATTGGATGAGCTCCTAGCGGCGGGCGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGAGGGTTGGTGGTGTGTGGCAGGGACTCAGTTGTGGGCTCACACATCTGGCGGTACAGTTCTCTTaGTCCGCGTCCACCACGGCT | + |
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Preference number: 5 (lower is better) Translates to: PQRVGGVWQGLSCGLTHLAVQFS*SASTTA Trigger: AGCCGTGGTGGACGCGGACAAAGAGAACTGTACCGC...CAGATGTGTGAGCCCACAACTGAGTCCCTGCCACACACCACCAACCCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS CCA 90 bp | AGAGCTTTCTTGGCCTTAATGAGCCGCGCCAGGTTGGCCAGAAGCTaGGCCTGTTCACAGGTCATCATGGAATCCCCCTGCGGCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RAFLALMSRARLARS*ACSQVIMESPCGCS Trigger: GGAGCAGCCGCAGGGGGATTCCATGATGACCTGTGAACAGGCCCAGCTTCTGGCCAACCTGGCGCGGCTCATTAAGGCCAAGAAAGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS TCA 90 bp | CGTTCGTTCAGGTTCCGCACACATTCAACAGTCTTGTTCCTGGGCTaGGGCTGCAGCACTTCTCCGCGCCACAGGACTCTGAGTACAGCG | + |
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Preference number: 5 (lower is better) Translates to: RSFRFRTHSTVLFLG*GCSTSPRHRTLSTA Trigger: CGCTGTACTCAGAGTCCTGTGGCGCGGAGAAGTGCTGCAGCCTCAGCCCAGGAACAAGACTGTTGAATGTGTGCGGAACCTGAACGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS-3UTR CAA 90 bp | CTGGAAGAGGATGCTCAGAAGGTCGCGTGTCCAGTACCTTTATTGTCAGGTTTAATGAGCCGCGCCAGGTaGGCCAGAAGCTGGGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LEEDAQKVACPVPLLSGLMSRAR*ARSWAC Trigger: ACAGGCCCAGCTTCTGGCCAACCTGGCGCGGCTCAT...TAAACCTGACAATAAAGGTACTGGACACGCGACCTTCTGAGCATCCTCTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS-3UTR CAA 90 bp | CAGCTAGGACAATTTATTAAAACTATGCGGTCAGATAAGGCCACAAGCCTTGGTAGATCCAGAGCTTTCTaGGCCTTAATGAGCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: QLGQFIKTMRSDKATSLGRSRAF*ALMSRA Trigger: GGCGCGGCTCATTAAGGCCAAGAAAGCTCTGGATCT...ACCAAGGCTTGTGGCCTTATCTGACCGCATAGTTTTAATAAATTGTCCTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS GCA 72 bp | CTGCTTCCACATGGGCCGTCCCAGCTTCGGGGGCTCTaGGTCAACCTCGCAGGTCACCACGCGGCCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLPHGPSQLRGL*VNLAGHHAASL Trigger: GAGGCTGGCCGCGTGGTGACCTGCGAGGTTGACGCAGAGCCCCCGAAGCTGGGACGGCCCATGTGGAAGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS GCA 72 bp | TCCAGGGTCAGCAGTCGCAGGCTCCGCAGCGCCGGGTaGTCTCTCATGGAGCGGCTCAGCAGATACTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SRVSSRRLRSAG*SLMERLSRYCH Trigger: GTGGCAGTATCTGCTGAGCCGCTCCATGAGAGAGCACCCGGCGCTGCGGAGCCTGCGACTGCTGACCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS GCA 72 bp | GCCTGTTCACAGGTCATCATGGAATCCCCCTGCGGCTaGTCCAGGGTCAGCAGTCGCAGGCTCCGCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: ACSQVIMESPCG*SRVSSRRLRSA Trigger: GGCGCTGCGGAGCCTGCGACTGCTGACCCTGGAGCAGCCGCAGGGGGATTCCATGATGACCTGTGAACAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS CCA 72 bp | AGGTGGCAGCAGGCGCTCTTGCCGCCTGGACCCCCATaGAGGCCACCGTTTCCCCAGCAAGAGACCAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RWQQALLPPGPP*RPPFPQQETSS Trigger: GCTACTGGTCTCTTGCTGGGGAAACGGTGGCCTCCATGGGGGTCCAGGCGGCAAGAGCGCCTGCTGCCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS TCA 72 bp | GCTGAGGCTGCAGCACTTCTCCGCGCCACAGGACTCTaGGTACAGCGAGCACGCCTCCGGGACGTAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: AEAAALLRATGL*VQRARLRDVGA Trigger: AGCTCCTACGTCCCGGAGGCGTGCTCGCTGTACTCAGAGTCCTGTGGCGCGGAGAAGTGCTGCAGCCTCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS GCA 72 bp | GTCTGCAGGGCGGGCTGCAGCCGAAGGTCGATCTTCTaGTCCACTTCTGCCTGCTTCCACATGGGCCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VCRAGCSRRSIF*STSACFHMGRP Trigger: GGGACGGCCCATGTGGAAGCAGGCAGAAGTGGAGCAGAAGATCGACCTTCGGCTGCAGCCCGCCCTGCAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS CCA 72 bp | GATTGTCCTCAGGTGGCAGCAGGCGCTCTTGCCGCCTaGACCCCCATGGAGGCCACCGTTTCCCCAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: DCPQVAAGALAA*TPMEATVSPAR Trigger: TCTTGCTGGGGAAACGGTGGCCTCCATGGGGGTCCAGGCGGCAAGAGCGCCTGCTGCCACCTGAGGACAATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS CCA 72 bp | GCAGTCGCAGGCTCCGCAGCGCCGGGTGCTCTCTCATaGAGCGGCTCAGCAGATACTGCCACAGGGGATTGT | + |
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Preference number: 6 (lower is better) Translates to: AVAGSAAPGALS*SGSADTATGDC Trigger: ACAATCCCCTGTGGCAGTATCTGCTGAGCCGCTCCATGAGAGAGCACCCGGCGCTGCGGAGCCTGCGACTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS CAA 90 bp | GGGTGCTCTCTCATGGAGCGGCTCAGCAGATACTGCCACAGGGGATaGTCCTCAGGTGGCAGCAGGCGCTCTTGCCGCCTGGACCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GCSLMERLSRYCHRG*SSGGSRRSCRLDPH Trigger: ATGGGGGTCCAGGCGGCAAGAGCGCCTGCTGCCACCTGAGGACAATCCCCTGTGGCAGTATCTGCTGAGCCGCTCCATGAGAGAGCACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS CAA 72 bp | CTCATGGAGCGGCTCAGCAGATACTGCCACAGGGGATaGTCCTCAGGTGGCAGCAGGCGCTCTTGCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LMERLSRYCHRG*SSGGSRRSCRL Trigger: CAGGCGGCAAGAGCGCCTGCTGCCACCTGAGGACAATCCCCTGTGGCAGTATCTGCTGAGCCGCTCCATGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124549.9 |
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| CDS GCA 72 bp | GCCGCTAGGAGCTCATCCAATGTCTGCAGGGCGGGCTaGAGCCGAAGGTCGATCTTCTGCTCCACTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AARSSSNVCRAG*SRRSIFCSTSA Trigger: GGCAGAAGTGGAGCAGAAGATCGACCTTCGGCTGCAGCCCGCCCTGCAGACATTGGATGAGCTCCTAGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS CCA 72 bp | TTGGCCTTAATGAGCCGCGCCAGGTTGGCCAGAAGCTaGGCCTGTTCACAGGTCATCATGGAATCCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LALMSRARLARS*ACSQVIMESPC Trigger: GCAGGGGGATTCCATGATGACCTGTGAACAGGCCCAGCTTCTGGCCAACCTGGCGCGGCTCATTAAGGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS CAA 90 bp | GTACCCAGATCCAGAGCTTTCTTGGCCTTAATGAGCCGCGCCAGGTaGGCCAGAAGCTGGGCCTGTTCACAGGTCATCATGGAATCCCCC | + |
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Preference number: 6 (lower is better) Translates to: VPRSRAFLALMSRAR*ARSWACSQVIMESP Trigger: GGGGGATTCCATGATGACCTGTGAACAGGCCCAGCTTCTGGCCAACCTGGCGCGGCTCATTAAGGCCAAGAAAGCTCTGGATCTGGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS TCA 72 bp | AGGTTCCGCACACATTCAACAGTCTTGTTCCTGGGCTaGGGCTGCAGCACTTCTCCGCGCCACAGGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: RFRTHSTVLFLG*GCSTSPRHRTL Trigger: CAGAGTCCTGTGGCGCGGAGAAGTGCTGCAGCCTCAGCCCAGGAACAAGACTGTTGAATGTGTGCGGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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| CDS CAA 72 bp | TCCAGAGCTTTCTTGGCCTTAATGAGCCGCGCCAGGTaGGCCAGAAGCTGGGCCTGTTCACAGGTCATCATG | + |
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Preference number: 6 (lower is better) Translates to: SRAFLALMSRAR*ARSWACSQVIM Trigger: CATGATGACCTGTGAACAGGCCCAGCTTCTGGCCAACCTGGCGCGGCTCATTAAGGCCAAGAAAGCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124549.9 ENSMUST00000177527.2 |
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