Pregenerated sensors for COMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000326Ensembl transcript IDs: ENSMUST00000000335.12, ENSMUST00000115609.10, ENSMUST00000147720.3, ENSMUST00000165430.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAACTCACTGTGTAGACCAGGCTGGCACAGAACTCAGATCCATCTaGCTCTGCCTCCTGGATTCTGGGATTAAAGGCATGCGCCATCAT | + |
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Preference number: 1 (lower is better) Translates to: GTHCVDQAGTELRSI*LCLLDSGIKGMRHH Trigger: ATGATGGCGCATGCCTTTAATCCCAGAATCCAGGAGGCAGAGGCAGATGGATCTGAGTTCTGTGCCAGCCTGGTCTACACAGTGAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR TCA 90 bp | ATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ILLRMVVSHHVVAGI*TLDLQKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR CCA 90 bp | GCATCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ASDLVTDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTCGTGCAGAAGGGAGCTaGGACGGAAGCTCATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: EPQALRKGPRSIEGVRVSRAEGS*DGSSSG Trigger: GCCTGATGAGCTTCCGTCCCAGCTCCCTTCTGCACG...ACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR CCA 90 bp | GACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCCGTGCAGAAGGGAGCTaGGACGGAAGCTCATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: DNLEPQALRKGPRSIEGVRAEGS*DGSSSG Trigger: GCCTGATGAGCTTCCGTCCCAGCTCCCTTCTGCACG...GACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTGGAGCCACAGGCCCTaGGGAAAGGCCCCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: MWLLGFELWTFRRAVGCSWSHRP*GKAPEA Trigger: TGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCA...AGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCCATCTGCCTCTGCCTCCTGGATTCTGGGATTAAAGGCATGCGCCATCATTGGAGCCACAGGCCCTaGGGAAAGGCCCCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RSICLCLLDSGIKGMRHHWSHRP*GKAPEA Trigger: TGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCA...ATGATGGCGCATGCCTTTAATCCCAGAATCCAGGAGGCAGAGGCAGATGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCACCGTGAGGGGTTTTaGGTGCCAGGCACGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: PCGCWDLNSGPSEEQSGAHREGF*VPGTHC Trigger: ACAGTGCGTGCCTGGCACGCAAAACCCCTCACGGTG...AGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGATCCATCTGCCTCTGCCTCCTGGATTCTGGGATTAAAGGCATGCGCCATCCGTGCAGAAGGGAGCTaGGACGGAAGCTCATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SDPSASASWILGLKACAIRAEGS*DGSSSG Trigger: GCCTGATGAGCTTCCGTCCCAGCTCCCTTCTGCACG...GATGGCGCATGCCTTTAATCCCAGAATCCAGGAGGCAGAGGCAGATGGATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR CAA 90 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCCTCAATGCAGCCTTTaGTGCACAGGTGTTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PCGCWDLNSGPSEEQSGAPQCSL*CTGVFQ Trigger: CTGGAAAACACCTGTGCATCAAAGGCTGCATTGAGG...AGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGGCATCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGCTTTTTGTTCTTGGGTaGAGAGGATTCACCGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: KRASDLVTDGCEPPCGCWLFVLG*RGFTVR Trigger: CCTCACGGTGAATCCTCTGCACCCAAGAACAAAAAG...CCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGATGCCCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR GCA 72 bp | AGGGGTTTTGCGTGCCAGGCACGCACTGTGATCTACTaGATCTCTGGCCTCAATGCAGCCTTTGATGCACAG | + |
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Preference number: 3 (lower is better) Translates to: RGFACQARTVIY*ISGLNAAFDAQ Trigger: CTGTGCATCAAAGGCTGCATTGAGGCCAGAGATGCAGTAGATCACAGTGCGTGCCTGGCACGCAAAACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR GCA 72 bp | GACCAGGCTGGCACAGAACTCAGATCCATCTGCCTCTaGCTCCTGGATTCTGGGATTAAAGGCATGCGCCAT | + |
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Preference number: 3 (lower is better) Translates to: DQAGTELRSICL*LLDSGIKGMRH Trigger: ATGGCGCATGCCTTTAATCCCAGAATCCAGGAGGCAGAGGCAGATGGATCTGAGTTCTGTGCCAGCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR-3UTR CAA 90 bp | GGAACTCACTGTGTAGACCAGGCTGGCACAGAACTCAGATCCATCTGCCTCTGCCAGTTTCCTGACTTCTaGCTGAGTGATGGCAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: GTHCVDQAGTELRSICLCQFPDF*LSDGSA Trigger: GGCACTGCCATCACTCAGCAAGAAGTCAGGAAACTG...GCAGAGGCAGATGGATCTGAGTTCTGTGCCAGCCTGGTCTACACAGTGAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR CCA 72 bp | CTGGCACAGAACTCAGATCCATCTGCCTCTGCCTCCTaGATTCTGGGATTAAAGGCATGCGCCATCATACCT | + |
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Preference number: 3 (lower is better) Translates to: LAQNSDPSASAS*ILGLKACAIIP Trigger: AGGTATGATGGCGCATGCCTTTAATCCCAGAATCCAGGAGGCAGAGGCAGATGGATCTGAGTTCTGTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR-3UTR CAA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTGCCTCAATGCAGCCTTaGATGCACAGGTGTTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PCGCWDLNSGPSEEQSGAASMQP*MHRCFP Trigger: TGGAAAACACCTGTGCATCAAAGGCTGCATTGAGGC...AGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR-3UTR CAA 90 bp | GGAACTCACTGTGTAGACCAGGCTGGCACAGAACTCAGATCCATCTGCCTCTGCGAAATGTGGTATGAGTaGCTGGTGACAGTACCGTCT | + |
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Preference number: 3 (lower is better) Translates to: GTHCVDQAGTELRSICLCEMWYE*LVTVPS Trigger: AGACGGTACTGTCACCAGCAACTCATACCACATTTC...GCAGAGGCAGATGGATCTGAGTTCTGTGCCAGCCTGGTCTACACAGTGAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAGGGCATCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGGGTATTGTAGTGGTTaGCATGGTGAGCTCACTACC | + |
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Preference number: 3 (lower is better) Translates to: KRASDLVTDGCEPPCGCWGYCSG*HGELTT Trigger: GGTAGTGAGCTCACCATGCAAACCACTACAATACCC...CCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGATGCCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR CCA 72 bp | CTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR GCA 72 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCAGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR CCA 72 bp | CCGTCTGAGTCGTTGCTGCCATTGGTGACAGCCGAATaGTATCTGGATATGTTCAGTTTCCTGACTTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: PSESLLPLVTAE*YLDMFSFLTSC Trigger: GCAAGAAGTCAGGAAACTGAACATATCCAGATACCATTCGGCTGTCACCAATGGCAGCAACGACTCAGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| 3UTR GCA 72 bp | TCTGCCTCTGCCTCCTGGATTCTGGGATTAAAGGCATaGGCCATCATACCTGAAAAGTTTGTGACTCATTCT | + |
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Preference number: 3 (lower is better) Translates to: SASASWILGLKA*AIIPEKFVTHS Trigger: AGAATGAGTCACAAACTTTTCAGGTATGATGGCGCATGCCTTTAATCCCAGAATCCAGGAGGCAGAGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | GAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTGCCTCCAGGACGCTCTaGGGGTCTCCAGGCTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: EPQALRKGPRSIEGVRVSASRTL*GSPGFA Trigger: CGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGC...ACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTGGAGCACCGTCCCCTTaGGCAGCAGGCCACATTCCT | + |
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Preference number: 4 (lower is better) Translates to: EPQALRKGPRSIEGVRVSGAPSP*AAGHIP Trigger: AGGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCC...ACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCGGAGCACCGTCCCCTTaGGCAGCAGGCCACATTCCT | + |
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Preference number: 4 (lower is better) Translates to: DNLEPQALRKGPRSIEGVGAPSP*AAGHIP Trigger: AGGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCC...GACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | CATAGAGGGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGGCCTCCAGGACGCTCTaGGGGTCTCCAGGCTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: HRGGQSECVSSCRRELGRASRTL*GSPGFA Trigger: CGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGC...CCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCCCTCTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | AATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAAAGCCTGGCTCCAGGTaGCAGCAGGCGGGCCATTCG | + |
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Preference number: 4 (lower is better) Translates to: NLEPQALRKGPRSIEGVRKPGSR*QQAGHS Trigger: CGAATGGCCCGCCTGCTGCCACCTGGAGCCAGGCTT...TCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | GGGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGAAGCTCCCTTTGTGCCACCCATaGGCAGGTTGTGGACCGGCT | + |
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Preference number: 4 (lower is better) Translates to: GGQSECVSSCRRELGRKLPLCHP*AGCGPA Trigger: AGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGG...GAGCTTCCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | GGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGCCAGCATTTGCTGGGTaGTGGCAGCGTAGTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GATGPEERPQKHRGGQSEPAFAG*WQRSQG Trigger: ACCCTGACTACGCTGCCATCACCCAGCAAATGCTGG...CTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTGTTGGCGCAGGATGCGCTaGTCCTTTGTGCCACCCATG | + |
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Preference number: 4 (lower is better) Translates to: ATGPEERPQKHRGGQSECWRRMR*SFVPPM Trigger: CATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCA...ACACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTACTTCACGGGGCTGCTaGCTGGACCCTGGTAGACTG | + |
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Preference number: 4 (lower is better) Translates to: EPQALRKGPRSIEGVRVSTSRGC*LDPGRL Trigger: CAGTCTACCAGGGTCCAGGCAGCAGCCCCGTGAAGT...ACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | CCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTGTGACTTCACGGGGCTGCTaGCTGGACCCTGGTAGACTG | + |
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Preference number: 4 (lower is better) Translates to: PQALRKGPRSIEGVRVSVTSRGC*LDPGRL Trigger: CAGTCTACCAGGGTCCAGGCAGCAGCCCCGTGAAGT...CACACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCACTTCACGGGGCTGCTaGCTGGACCCTGGTAGACTG | + |
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Preference number: 4 (lower is better) Translates to: DNLEPQALRKGPRSIEGVTSRGC*LDPGRL Trigger: CAGTCTACCAGGGTCCAGGCAGCAGCCCCGTGAAGT...GACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | CCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTGTGCCCATGAGCAGGTTGTaGACCGGCTGCTGCACGAAC | + |
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Preference number: 4 (lower is better) Translates to: PQALRKGPRSIEGVRVSVPMSRL*TGCCTN Trigger: GTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGG...CACACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | TATGACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGAAGCCTGGCTCCAGGTaGCAGCAGGCGGGCCATTCG | + |
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Preference number: 4 (lower is better) Translates to: YDNLEPQALRKGPRSIEGKPGSR*QQAGHS Trigger: CGAATGGCCCGCCTGCTGCCACCTGGAGCCAGGCTT...CCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | CATAGAGGGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGCCTTTGTGCCACCCATaGGCAGGTTGTGGACCGGCT | + |
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Preference number: 4 (lower is better) Translates to: HRGGQSECVSSCRRELGRPLCHP*AGCGPA Trigger: AGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGG...CCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCCCTCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGAAGCTCATGGCGCAGGATGCGCTaGTCCTTTGTGCCACCCATG | + |
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Preference number: 4 (lower is better) Translates to: GVRVSVCHRAEGSWDGSSWRRMR*SFVPPM Trigger: CATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCA...TGAGCTTCCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | TATGACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGGAGCACCGTCCCCTTaGGCAGCAGGCCACATTCCT | + |
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Preference number: 4 (lower is better) Translates to: YDNLEPQALRKGPRSIEGGAPSP*AAGHIP Trigger: AGGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCC...CCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTCATA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | TATGACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGCCTTTGTGCCACCCATaGGCAGGTTGTGGACCGGCT | + |
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Preference number: 4 (lower is better) Translates to: YDNLEPQALRKGPRSIEGPLCHP*AGCGPA Trigger: AGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGG...CCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | GGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGAAGCTCACCAGCATTTGCTGGGTaGTGGCAGCGTAGTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GVRVSVCHRAEGSWDGSSPAFAG*WQRSQG Trigger: ACCCTGACTACGCTGCCATCACCCAGCAAATGCTGG...TGAGCTTCCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | CATAGAGGGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGCGTCACCCACGTTCATaGCCCACTCCTTCTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HRGGQSECVSSCRRELGRRHPRS*PTPSLS Trigger: GCTCAGAGAAGGAGTGGGCCATGAACGTGGGTGACG...CCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCCCTCTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | CAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGAAGCTCATCAGGCCAGCATTTGCTGGGTaGTGGCAGCGTAGTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QSECVSSCRRELGRKLIRPAFAG*WQRSQG Trigger: ACCCTGACTACGCTGCCATCACCCAGCAAATGCTGG...CCTGATGAGCTTCCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTGTGATAAGGTCCTGGGATaGCCCGATGAGGATGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: ATGPEERPQKHRGGQSECDKVLG*PDEDGN Trigger: GTTTCCATCCTCATCGGGGCATCCCAGGACCTTATC...ACACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | AAGAGGGCATCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGAAGCCTGGCTCCAGGTaGCAGCAGGCGGGCCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: KRASDLVTDGCEPPCGCWKPGSR*QQAGHS Trigger: CGAATGGCCCGCCTGCTGCCACCTGGAGCCAGGCTT...CCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGATGCCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGCAGGAGAAGTGTGTCTaGAAGGTAGCGGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GATGPEERPQKHRGGQSEQEKCV*KVAVFP Trigger: TGGAAAGACCGCTACCTTCCAGACACACTTCTCCTG...CTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | GACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCCAGGAGAAGTGTGTCTaGAAGGTAGCGGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DNLEPQALRKGPRSIEGVQEKCV*KVAVFP Trigger: TGGAAAGACCGCTACCTTCCAGACACACTTCTCCTG...GACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | GGGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGAAGCTCGAATCACTGCATCCATaGTTTGGCCTTTTGCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GGQSECVSSCRRELGRKLESLHP*FGLLRH Trigger: GTGACGCAAAAGGCCAAATCATGGATGCAGTGATTC...GAGCTTCCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | TATGACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGATAAGGTCCTGGGATaGCCCGATGAGGATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YDNLEPQALRKGPRSIEGDKVLG*PDEDGN Trigger: GTTTCCATCCTCATCGGGGCATCCCAGGACCTTATC...CCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCGTCACCCACGTTCATaGCCCACTCCTTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQSGARHPRS*PTPSLS Trigger: GCTCAGAGAAGGAGTGGGCCATGAACGTGGGTGACG...AGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | GAACTCAGATCCATCTGCCTCTGCCTCCTGGATTCTGGGATTAAAGGCATGCGCCGTCACCCACGTTCATaGCCCACTCCTTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELRSICLCLLDSGIKGMRRHPRS*PTPSLS Trigger: GCTCAGAGAAGGAGTGGGCCATGAACGTGGGTGACG...GCGCATGCCTTTAATCCCAGAATCCAGGAGGCAGAGGCAGATGGATCTGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | GCATCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGCCCATGAGCAGGTTGTaGACCGGCTGCTGCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASDLVTDGCEPPCGCWDLPMSRL*TGCCTN Trigger: GTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGG...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR GCA 90 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTTGGCGCAGGATGCGCTaGTCCTTTGTGCCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DLVTDGCEPPCGCWDLNSWRRMR*SFVPPM Trigger: CATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCA...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTCCCATGAGCAGGTTGTaGACCGGCTGCTGCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLVTDGCEPPCGCWDLNSPMSRL*TGCCTN Trigger: GTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGG...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR TCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTGAATCACTGCATCCATaGTTTGGCCTTTTGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQSGAESLHP*FGLLRH Trigger: GTGACGCAAAAGGCCAAATCATGGATGCAGTGATTC...AGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| 3UTR CAA 72 bp | GCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTaGTTACGGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHTRRGHQI*LRMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CCA 90 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTCAGGAGAAGTGTGTCTaGAAGGTAGCGGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLVTDGCEPPCGCWDLNSQEKCV*KVAVFP Trigger: TGGAAAGACCGCTACCTTCCAGACACACTTCTCCTG...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | GGGTCTCCAGGCTTTGCGTGTTGCTGCACATGGCGCAGGATGCGCTaGTCCTTTGTGCCACCCATGAGCAGGTTGTGGACCGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGFACCCTWRRMR*SFVPPMSRLWTGCC Trigger: GCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | ATGGCCTCCAGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTTGCTaGACATGGCGCAGGATGCGCTGCTCCTTTGTGCCACCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MASRTLWGSPGFACC*TWRRMRCSFVPPMS Trigger: GCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | GAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGAGTGAGTCCACCCATGAGCAGGTaGTGGACCGGCTGCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: EPQALRKGPRSIEGVRVSPPMSR*WTGCCT Trigger: CGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGG...ACTCACTCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | GACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCCCACCCATGAGCAGGTaGTGGACCGGCTGCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: DNLEPQALRKGPRSIEGVPPMSR*WTGCCT Trigger: CGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGG...GACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | GACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGGAGCACCGTCCCCTaGCGCAGCAGGCCACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: DNLEPQALRKGPRSIEGVRSTVP*RSRPHS Trigger: GGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCCT...GACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | TCAATGGCCTCCAGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTTaGTGCACATGGCGCAGGATGCGCTGCTCCTTTGTGCCACCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SMASRTLWGSPGFAC*CTWRRMRCSFVPPM Trigger: CATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGCCATTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CCA 90 bp | TCCAGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTTGCTGCACATaGCGCAGGATGCGCTGCTCCTTTGTGCCACCCATGAGCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRTLWGSPGFACCCT*RRMRCSFVPPMSRL Trigger: CAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | CATAGAGGGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGAGGAGCACCGTCCCCTaGCGCAGCAGGCCACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRGGQSECVSSCRRELGRRSTVP*RSRPHS Trigger: GGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCCT...CCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCCCTCTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | TATGACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGCCACCCATGAGCAGGTaGTGGACCGGCTGCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: YDNLEPQALRKGPRSIEGPPMSR*WTGCCT Trigger: CGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGG...CCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | TATGACAATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGAGGAGCACCGTCCCCTaGCGCAGCAGGCCACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: YDNLEPQALRKGPRSIEGRSTVP*RSRPHS Trigger: GGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCCT...CCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATTGTCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | CGCTGCTCCTTTGTGCCACCCATGAGCAGGTTGTGGACCGGCTGCTaGACGAACTCAAACCAACCAATAGCCACCAAGCCCCAGCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCSFVPPMSRLWTGC*TNSNQPIATKPQPR Trigger: CCTAGGCTGGGGCTTGGTGGCTATTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS TCA 90 bp | GTTGCTGCACATGGCGCAGGATGCGCTGCTCCTTTGTGCCACCCATaGGCAGGTTGTGGACCGGCTGCTGCACGAACTCAAACCAACCAA | + |
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Preference number: 5 (lower is better) Translates to: VAAHGAGCAAPLCHP*AGCGPAAARTQTNQ Trigger: TTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | ATGCGCTGCTCCTTTGTGCCACCCATGAGCAGGTTGTGGACCGGCTaGTGCACGAACTCAAACCAACCAATAGCCACCAAGCCCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MRCSFVPPMSRLWTG*CTNSNQPIATKPQP Trigger: AGGCTGGGGCTTGGTGGCTATTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CCA 90 bp | TGGCGCAGGATGCGCTGCTCCTTTGTGCCACCCATGAGCAGGTTGTaGACCGGCTGCTGCACGAACTCAAACCAACCAATAGCCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRRMRCSFVPPMSRL*TGCCTNSNQPIATK Trigger: CTTGGTGGCTATTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CCA 90 bp | CACCCACGTTCATGGCCCACTCCTTCTCTGAGCAGTAGGTATCAATaGCCTCCAGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HPRSWPTPSLSSRYQ*PPGRSGGLQALRVA Trigger: AGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGCCATTGATACCTACTGCTCAGAGAAGGAGTGGGCCATGAACGTGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | GGGGGTCAGAGTGAGTGTGTGTCATCGTGCAGAAGGGAGCTGGGACGGAAGCTCTGCGAAGTCCAGCATTaGCTGGGTGATGGCAGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGQSECVSSCRRELGRKLCEVQH*LGDGSV Trigger: TACGCTGCCATCACCCAGCAAATGCTGGACTTCGCA...GAGCTTCCGTCCCAGCTCCCTTCTGCACGATGACACACACTCACTCTGACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS TCA 90 bp | GCTCCAGCACCAGCGAGGGCCTGTACTCCCGAATCACTGCATCCATaGTTTGGCCTTTTGCGTCACCCACGTTCATGGCCCACTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: APAPARACTPESLHP*FGLLRHPRSWPTPS Trigger: AGAAGGAGTGGGCCATGAACGTGGGTGACGCAAAAGGCCAAATCATGGATGCAGTGATTCGGGAGTACAGGCCCTCGCTGGTGCTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS-3UTR CAA 90 bp | AATCTGGAGCCACAGGCCCTGAGGAAAGGCCCCAGAAGCATAGAGGGGGTCAGATGCGAAGTCCAGCATTaGCTGGGTGATGGCAGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: NLEPQALRKGPRSIEGVRCEVQH*LGDGSV Trigger: TACGCTGCCATCACCCAGCAAATGCTGGACTTCGCA...TCTGACCCCCTCTATGCTTCTGGGGCCTTTCCTCAGGGCCTGTGGCTCCAGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | TCATGTACTCCAGGTATGAGCTGTAGTGTGTGCACTCGAAGCTGCTaGTCCCCCTCACATACGCCAGGAAGTCAGGGGTTCCCGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SCTPGMSCSVCTRSC*SPSHTPGSQGFPGQ Trigger: TTGTCCCGGGAACCCCTGACTTCCTGGCGTATGTGAGGGGGAGCAGCAGCTTCGAGTGCACACACTACAGCTCATACCTGGAGTACATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | CTTTCATGTACTCCAGGTATGAGCTGTAGTGTGTGCACTCGAAGCTaGTGCTCCCCCTCACATACGCCAGGAAGTCAGGGGTTCCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSCTPGMSCSVCTRS*CSPSHTPGSQGFPG Trigger: TCCCGGGAACCCCTGACTTCCTGGCGTATGTGAGGGGGAGCAGCAGCTTCGAGTGCACACACTACAGCTCATACCTGGAGTACATGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CCA 90 bp | AGCACCAGCGAGGGCCTGTACTCCCGAATCACTGCATCCATGATTTaGCCTTTTGCGTCACCCACGTTCATGGCCCACTCCTTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: STSEGLYSRITASMI*PFASPTFMAHSFSE Trigger: CTCAGAGAAGGAGTGGGCCATGAACGTGGGTGACGCAAAAGGCCAAATCATGGATGCAGTGATTCGGGAGTACAGGCCCTCGCTGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 90 bp | AGCCGTCCACCACTTTCATGTACTCCAGGTATGAGCTGTAGTGTGTaGACTCGAAGCTGCTGCTCCCCCTCACATACGCCAGGAAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRPPLSCTPGMSCSV*TRSCCSPSHTPGSQ Trigger: CTGACTTCCTGGCGTATGTGAGGGGGAGCAGCAGCTTCGAGTGCACACACTACAGCTCATACCTGGAGTACATGAAAGTGGTGGACGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS TCA 90 bp | GACTGCCTTCTCCAAGCCGTCCACCACTTTCATGTACTCCAGGTATaGGCTGTAGTGTGTGCACTCGAAGCTGCTGCTCCCCCTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: DCLLQAVHHFHVLQV*AVVCALEAAAPPHI Trigger: TATGTGAGGGGGAGCAGCAGCTTCGAGTGCACACACTACAGCTCATACCTGGAGTACATGAAAGTGGTGGACGGCTTGGAGAAGGCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CCA 90 bp | AATGTGTCCACATCGTACTTCTTCTTCAGCTGGGGGATAAGGTCCTaGGATGCCCCGATGAGGATGGAAACTTTGTCCTGTAGGCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NVSTSYFFFSWGIRS*DAPMRMETLSCRPA Trigger: CGCAGGCCTACAGGACAAAGTTTCCATCCTCATCGGGGCATCCCAGGACCTTATCCCCCAGCTGAAGAAGAAGTACGATGTGGACACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CCA 90 bp | AGAAAGACCATGTCTAATGTGTCCACATCGTACTTCTTCTTCAGCTaGGGGATAAGGTCCTGGGATGCCCCGATGAGGATGGAAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKTMSNVSTSYFFFS*GIRSWDAPMRMETL Trigger: CAAAGTTTCCATCCTCATCGGGGCATCCCAGGACCTTATCCCCCAGCTGAAGAAGAAGTACGATGTGGACACATTAGACATGGTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CAA 72 bp | CAATGGCCTCCAGGACGCTCTGGGGGTCTCCAGGCTTaGCGTGTTGCTGCACATGGCGCAGGATGCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QWPPGRSGGLQA*RVAAHGAGCAA Trigger: AGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGCCATTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 72 bp | AGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTTGCTaGACATGGCGCAGGATGCGCTGCTCCTTTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTLWGSPGFACC*TWRRMRCSFVP Trigger: TGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 72 bp | TCCAGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTTaGTGCACATGGCGCAGGATGCGCTGCTCCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRTLWGSPGFAC*CTWRRMRCSFV Trigger: CACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CAA 72 bp | CTCCAGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTaGCTGCACATGGCGCAGGATGCGCTGCTCCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LQDALGVSRLCV*LHMAQDALLLC Trigger: ACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CAA 90 bp | ATCAATGGCCTCCAGGACGCTCTGGGGGTCTCCAGGCTTTGCGTGTaGCTGCACATGGCGCAGGATGCGCTGCTCCTTTGTGCCACCCAT | + |
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Preference number: 6 (lower is better) Translates to: INGLQDALGVSRLCV*LHMAQDALLLCATH Trigger: ATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGCCATTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS TCA 72 bp | CATGGCGCAGGATGCGCTGCTCCTTTGTGCCACCCATaGGCAGGTTGTGGACCGGCTGCTGCACGAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: HGAGCAAPLCHP*AGCGPAAARTQ Trigger: TTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 72 bp | GGCTTTGCGTGTTGCTGCACATGGCGCAGGATGCGCTaGTCCTTTGTGCCACCCATGAGCAGGTTGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: GFACCCTWRRMR*SFVPPMSRLWT Trigger: GGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CAA 90 bp | AGTAGGTATCAATGGCCTCCAGGACGCTCTGGGGGTCTCCAGGCTTaGCGTGTTGCTGCACATGGCGCAGGATGCGCTGCTCCTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SRYQWPPGRSGGLQA*RVAAHGAGCAAPLC Trigger: GCACAAAGGAGCAGCGCATCCTGCGCCATGTGCAGCAACACGCAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGCCATTGATACCTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CAA 90 bp | GGGGTTCCCGGGACAATGACATTGTCAGCTAGGAGCACCGTCCCCTaGCGCAGCAGGCCACATTCCTCCAGGAGAAGTGTGTCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GVPGTMTLSARSTVP*RSRPHSSRRSVSGR Trigger: CCTTCCAGACACACTTCTCCTGGAGGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCCTAGCTGACAATGTCATTGTCCCGGGAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS GCA 72 bp | GGACTTCACGGGGCTGCTGCCTGGACCCTGGTAGACTaGCTTCTCCAAGCCGTCCACCACTTTCATGTACTC | + |
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Preference number: 6 (lower is better) Translates to: GLHGAAAWTLVD*LLQAVHHFHVL Trigger: GAGTACATGAAAGTGGTGGACGGCTTGGAGAAGGCAGTCTACCAGGGTCCAGGCAGCAGCCCCGTGAAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CAA 90 bp | ACATGGCGCAGGATGCGCTGCTCCTTTGTGCCACCCATGAGCAGGTaGTGGACCGGCTGCTGCACGAACTCAAACCAACCAATAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: TWRRMRCSFVPPMSR*WTGCCTNSNQPIAT Trigger: GGTGGCTATTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCTGCGCCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 72 bp | ACTCCAGGTATGAGCTGTAGTGTGTGCACTCGAAGCTaGTGCTCCCCCTCACATACGCCAGGAAGTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TPGMSCSVCTRS*CSPSHTPGSQG Trigger: CCCCTGACTTCCTGGCGTATGTGAGGGGGAGCAGCAGCTTCGAGTGCACACACTACAGCTCATACCTGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CCA 72 bp | TCATGGCCCACTCCTTCTCTGAGCAGTAGGTATCAATaGCCTCCAGGACGCTCTGGGGGTCTCCAGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SWPTPSLSSRYQ*PPGRSGGLQAL Trigger: CAAAGCCTGGAGACCCCCAGAGCGTCCTGGAGGCCATTGATACCTACTGCTCAGAGAAGGAGTGGGCCATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CAA 72 bp | AGGATGCGCTGCTCCTTTGTGCCACCCATGAGCAGGTaGTGGACCGGCTGCTGCACGAACTCAAACCAACCA | + |
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Preference number: 6 (lower is better) Translates to: RMRCSFVPPMSR*WTGCCTNSNQP Trigger: TGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CAA 72 bp | GGGACAATGACATTGTCAGCTAGGAGCACCGTCCCCTaGCGCAGCAGGCCACATTCCTCCAGGAGAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GTMTLSARSTVP*RSRPHSSRRSV Trigger: CACACTTCTCCTGGAGGAATGTGGCCTGCTGCGCAAGGGGACGGTGCTCCTAGCTGACAATGTCATTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CAA 90 bp | AGCTGGGGGATAAGGTCCTGGGATGCCCCGATGAGGATGGAAACTTaGTCCTGTAGGCCTGCGAAGTCCAGCATTTGCTGGGTGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: SWGIRSWDAPMRMET*SCRPAKSSICWVMA Trigger: TGCCATCACCCAGCAAATGCTGGACTTCGCAGGCCTACAGGACAAAGTTTCCATCCTCATCGGGGCATCCCAGGACCTTATCCCCCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS GCA 72 bp | TTTGTGCCACCCATGAGCAGGTTGTGGACCGGCTGCTaGACGAACTCAAACCAACCAATAGCCACCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FVPPMSRLWTGC*TNSNQPIATKP Trigger: GGGCTTGGTGGCTATTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CCA 72 bp | GAGGGCCTGTACTCCCGAATCACTGCATCCATGATTTaGCCTTTTGCGTCACCCACGTTCATGGCCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: EGLYSRITASMI*PFASPTFMAHS Trigger: GGAGTGGGCCATGAACGTGGGTGACGCAAAAGGCCAAATCATGGATGCAGTGATTCGGGAGTACAGGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CAA 72 bp | CGAGGGCCTGTACTCCCGAATCACTGCATCCATGATTaGGCCTTTTGCGTCACCCACGTTCATGGCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: RGPVLPNHCIHD*AFCVTHVHGPL Trigger: GAGTGGGCCATGAACGTGGGTGACGCAAAAGGCCAAATCATGGATGCAGTGATTCGGGAGTACAGGCCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS TCA 72 bp | CTCCAAGCCGTCCACCACTTTCATGTACTCCAGGTATaGGCTGTAGTGTGTGCACTCGAAGCTGCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LQAVHHFHVLQV*AVVCALEAAAP Trigger: GGGAGCAGCAGCTTCGAGTGCACACACTACAGCTCATACCTGGAGTACATGAAAGTGGTGGACGGCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS GCA 72 bp | TCCTTTGTGCCACCCATGAGCAGGTTGTGGACCGGCTaGTGCACGAACTCAAACCAACCAATAGCCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: SFVPPMSRLWTG*CTNSNQPIATK Trigger: CTTGGTGGCTATTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CCA 72 bp | ATGCGCTGCTCCTTTGTGCCACCCATGAGCAGGTTGTaGACCGGCTGCTGCACGAACTCAAACCAACCAATA | + |
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Preference number: 6 (lower is better) Translates to: MRCSFVPPMSRL*TGCCTNSNQPI Trigger: TATTGGTTGGTTTGAGTTCGTGCAGCAGCCGGTCCACAACCTGCTCATGGGTGGCACAAAGGAGCAGCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000147720.3 ENSMUST00000165430.8 |
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| CDS CCA 72 bp | GCGCAGCAGGCCACATTCCTCCAGGAGAAGTGTGTCTaGAAGGTAGCGGTCTTTCCAGTGGTCAAGAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: AQQATFLQEKCV*KVAVFPVVKKD Trigger: GTCTTTCTTGACCACTGGAAAGACCGCTACCTTCCAGACACACTTCTCCTGGAGGAATGTGGCCTGCTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CCA 72 bp | ACATCGTACTTCTTCTTCAGCTGGGGGATAAGGTCCTaGGATGCCCCGATGAGGATGGAAACTTTGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: TSYFFFSWGIRS*DAPMRMETLSC Trigger: ACAGGACAAAGTTTCCATCCTCATCGGGGCATCCCAGGACCTTATCCCCCAGCTGAAGAAGAAGTACGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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| CDS CCA 72 bp | ATGTCTAATGTGTCCACATCGTACTTCTTCTTCAGCTaGGGGATAAGGTCCTGGGATGCCCCGATGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: MSNVSTSYFFFS*GIRSWDAPMRM Trigger: CATCCTCATCGGGGCATCCCAGGACCTTATCCCCCAGCTGAAGAAGAAGTACGATGTGGACACATTAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000335.12 ENSMUST00000115609.10 ENSMUST00000165430.8 |
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