Pregenerated sensors for COMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031849Ensembl transcript IDs: ENSMUST00000003659.9, ENSMUST00000212488.2, ENSMUST00000213072.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGGGCTGGGTGACCCATCGGGGCAGAAGTGCTGCCCACGCCGCTaGCAGCCTGACGTCTGGTCGCCCACGAAACCGGGCTGGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: HGLGDPSGQKCCPRR*QPDVWSPTKPGWQG Trigger: CCCCTGCCAGCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCCCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 90 bp | CCATCGGGGCAGAAGTGCTGCCCACGCCGCTGGCAGCCTGACGTCTaGTCGCCCACGAAACCGGGCTGGCAGGGGCCGCACTGGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: PSGQKCCPRRWQPDV*SPTKPGWQGPHWKE Trigger: CTCCTTCCAGTGCGGCCCCTGCCAGCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR GCA 90 bp | GCTTTCTCATGGCACGGGCTGGGTGACCCATCGGGGCAGAAGTGCTaGCCACGCCGCTGGCAGCCTGACGTCTGGTCGCCCACGAAACCG | + |
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Preference number: 1 (lower is better) Translates to: AFSWHGLGDPSGQKC*PRRWQPDVWSPTKP Trigger: CGGTTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGAGAAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR GCA 90 bp | TTTGCTTTCTCATGGCACGGGCTGGGTGACCCATCGGGGCAGAAGTaGTGCCCACGCCGCTGGCAGCCTGACGTCTGGTCGCCCACGAAA | + |
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Preference number: 1 (lower is better) Translates to: FAFSWHGLGDPSGQK*CPRRWQPDVWSPTK Trigger: TTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGAGAAAGCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 90 bp | CAAGACCTCGAGCCATCCCGCTCCAGGACGCAGTTTGCTTTCTCATaGCACGGGCTGGGTGACCCATCGGGGCAGAAGTGCTGCCCACGC | + |
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Preference number: 1 (lower is better) Translates to: QDLEPSRSRTQFAFS*HGLGDPSGQKCCPR Trigger: GCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTGCGTCCTGGAGCGGGATGGCTCGAGGTCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR GCA 90 bp | GAGCCCCGGGTGTTGACGCACACGGAGTTGGGAACGCAATTGTGCTaGCCGGTCTCACACTCATTAATATCCGTGCAAACTTGTTTGTTG | + |
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Preference number: 1 (lower is better) Translates to: EPRVLTHTELGTQLC*PVSHSLISVQTCLL Trigger: CAACAAACAAGTTTGCACGGATATTAATGAGTGTGAGACCGGGCAGCACAATTGCGTTCCCAACTCCGTGTGCGTCAACACCCGGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR TCA 90 bp | CGCCGCTGGCAGCCTGACGTCTGGTCGCCCACGAAACCGGGCTGGCAGGGGCCGAGGAGCCCCGGGTGTTaGCGCACACGGAGTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RRWQPDVWSPTKPGWQGPRSPGC*RTRSWE Trigger: TTCCCAACTCCGTGTGCGTCAACACCCGGGGCTCCT...CGGCCCCTGCCAGCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGCCGGCCCAGCCAACTGCACACACGCAAGACCTCGAGCCATCCCGCTCCAGCCCACGAAACCGGGCTaGCAGGGGCCGCACTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VAGPANCTHARPRAIPLQPTKPG*QGPHWK Trigger: CTTCCAGTGCGGCCCCTGCCAGCCCGGTTTCGTGGG...CTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGGCAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCGGCCCAGCCAACTGCACACACGCAAGACCTCGAGCCATCCCGCTCCAGGATGGCAGCCTGACGTCTaGTCGCCCACGAAACCGGGC | + |
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Preference number: 2 (lower is better) Translates to: CRPSQLHTRKTSSHPAPGWQPDV*SPTKPG Trigger: GCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCA...TCCTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTCTGGTCGCCCACGAAACCGGGCTGGCAGGGGCCGCACTGGAAGGAGCCCTTGGGAACGCAATTGTaGTGCCCGGTCTCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: DVWSPTKPGWQGPHWKEPLGTQL*CPVSHS Trigger: TGAGTGTGAGACCGGGCAGCACAATTGCGTTCCCAA...GGGCTCCTTCCAGTGCGGCCCCTGCCAGCCCGGTTTCGTGGGCGACCAGACGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR GCA 90 bp | CGCAAGACCTCGAGCCATCCCGCTCCAGGACGCAGTTTGCTTTCTCATGGCACGTCGGGGCAGAAGTGCTaGCCACGCCGCTGGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RKTSSHPAPGRSLLSHGTSGQKC*PRRWQP Trigger: AGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGA...CGTGCCATGAGAAAGCAAACTGCGTCCTGGAGCGGGATGGCTCGAGGTCTTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCCCAGCCAACTGCACACACGCAAGACCTCGAGCCATCCCGCTCCAGGACCAGTTTGCTTTCTCATaGCACGGGCTGGGTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: AGPANCTHARPRAIPLQDQFAFS*HGLGDP Trigger: TGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTG...GTCCTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CAA 90 bp | CTGCACACACGCAAGACCTCGAGCCATCCCGCTCCAGGACGCAGTTaGCTTTCTCATGGCACGGGCTGGGTGACCCATCGGGGCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LHTRKTSSHPAPGRS*LSHGTGWVTHRGRS Trigger: ACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTGCGTCCTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR GCA 72 bp | TGGCACGGGCTGGGTGACCCATCGGGGCAGAAGTGCTaGCCACGCCGCTGGCAGCCTGACGTCTGGTCGCCC | + |
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Preference number: 3 (lower is better) Translates to: WHGLGDPSGQKC*PRRWQPDVWSP Trigger: GGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 72 bp | CAGAAGTGCTGCCCACGCCGCTGGCAGCCTGACGTCTaGTCGCCCACGAAACCGGGCTGGCAGGGGCCGCAC | + |
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Preference number: 3 (lower is better) Translates to: QKCCPRRWQPDV*SPTKPGWQGPH Trigger: GTGCGGCCCCTGCCAGCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR TCA 72 bp | ATCGGGGCAGAAGTGCTGCCCACGCCGCTGGCAGCCTaGCGTCTGGTCGCCCACGAAACCGGGCTGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: IGAEVLPTPLAA*RLVAHETGLAG Trigger: CCCTGCCAGCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 72 bp | TGGCAGCCTGACGTCTGGTCGCCCACGAAACCGGGCTaGCAGGGGCCGCACTGGAAGGAGCCCCGGGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: WQPDVWSPTKPG*QGPHWKEPRVL Trigger: CAACACCCGGGGCTCCTTCCAGTGCGGCCCCTGCCAGCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 72 bp | GGTGACCCATCGGGGCAGAAGTGCTGCCCACGCCGCTaGCAGCCTGACGTCTGGTCGCCCACGAAACCGGGC | + |
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Preference number: 3 (lower is better) Translates to: GDPSGQKCCPRR*QPDVWSPTKPG Trigger: GCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR GCA 72 bp | TCATGGCACGGGCTGGGTGACCCATCGGGGCAGAAGTaGTGCCCACGCCGCTGGCAGCCTGACGTCTGGTCG | + |
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Preference number: 3 (lower is better) Translates to: SWHGLGDPSGQK*CPRRWQPDVWS Trigger: CGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 72 bp | GCTCCAGGACGCAGTTTGCTTTCTCATGGCACGGGCTaGGTGACCCATCGGGGCAGAAGTGCTGCCCACGCC | + |
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Preference number: 3 (lower is better) Translates to: APGRSLLSHGTG*VTHRGRSAAHA Trigger: GGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTGCGTCCTGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGTGACCCATCGGGGCAGAAGTGCTGCCCACGCCGCTGGCAGCCTGACGTCTGAGTTGGGAACGCAATaGTGCTGCCCGGTCTCACAC | + |
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Preference number: 3 (lower is better) Translates to: WVTHRGRSAAHAAGSLTSELGTQ*CCPVSH Trigger: GTGTGAGACCGGGCAGCACAATTGCGTTCCCAACTC...AGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 72 bp | GAGCCATCCCGCTCCAGGACGCAGTTTGCTTTCTCATaGCACGGGCTGGGTGACCCATCGGGGCAGAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: EPSRSRTQFAFS*HGLGDPSGQKC Trigger: GCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTGCGTCCTGGAGCGGGATGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR-3UTR CAA 90 bp | CGCAAGACCTCGAGCCATCCCGCTCCAGGACGCAGTTTGCTTTCTCATGGCACGAAGGAGCCCCGGGTGTaGACGCACACGGAGTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: RKTSSHPAPGRSLLSHGTKEPRV*THTELG Trigger: TCCCAACTCCGTGTGCGTCAACACCCGGGGCTCCTT...CGTGCCATGAGAAAGCAAACTGCGTCCTGGAGCGGGATGGCTCGAGGTCTTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| 3UTR CCA 72 bp | TGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTaGTCCCTAGACTCTCTGCAGCCGGTGACTCTCGTA | + |
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Preference number: 3 (lower is better) Translates to: CATTVHQAAGPH*SLDSLQPVTLV Trigger: TACGAGAGTCACCGGCTGCAGAGAGTCTAGGGACCAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212488.2 |
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| 3UTR-3UTR CAA 90 bp | ACGCAGTTTGCTTTCTCATGGCACGGGCTGGGTGACCCATCGGGGCAGAAGTGCTTGACGCACACGGAGTaGGGAACGCAATTGTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TQFAFSWHGLGDPSGQKCLTHTE*GTQLCC Trigger: GCAGCACAATTGCGTTCCCAACTCCGTGTGCGTCAA...GCACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| CDS-3UTR TCA 90 bp | CCGGCCCAGCCAACTGCACACACGCAAGACCTCGAGCCATCCCGCTCCAGGACGGGACAGGCTTCGCAGTaGAAGCCAGGGCTGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: PAQPTAHTQDLEPSRSRTGQASQ*KPGLVL Trigger: CAATACCAGCCCTGGCTTTCACTGCGAAGCCTGTCC...CGTCCTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| CDS-3UTR TCA 90 bp | ACACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACATGGCACGGGCTGGGTaGCCCATCGGGGCAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: THTPVACATTVHQAAGPHMARAG*PIGAEV Trigger: CACTTCTGCCCCGATGGGTCACCCAGCCCGTGCCAT...GTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | TTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCCCGCACAGGAGCCCGTTaGCGGCCCAGCCAACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LFASPPQARHPFRGMPDPRTGAR*RPSQLH Trigger: GTGCAGTTGGCTGGGCCGGCAACGGGCTCCTGTGCG...GGGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | CACCACAGTCCATCAGGCAGCGGGACCCCACTGGTCCCTAGACTCTCTGCAGCCCCCCGTGTGCCACAGTaGGTTTCGGAGCTGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: HHSPSGSGTPLVPRLSAAPRVPQ*VSELFP Trigger: GGGGAACAGCTCCGAAACGCACTGTGGCACACGGGG...GGCTGCAGAGAGTCTAGGGACCAGTGGGGTCCCGCTGCCTGATGGACTGTGGTG 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212488.2 |
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| CDS-3UTR GCA 90 bp | CCCACACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCGCTGTGTCCCCCGTGTaGCACAGTGCGTTTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PTHTPVACATTVHQAAGPAVSPV*HSAFRS Trigger: GCTCCGAAACGCACTGTGGCACACGGGGGACACAGC...GGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGTGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| 3UTR CAA 72 bp | CGCAAGACCTCGAGCCATCCCGCTCCAGGACGCAGTTaGCTTTCTCATGGCACGGGCTGGGTGACCCATCGG | + |
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Preference number: 4 (lower is better) Translates to: RKTSSHPAPGRS*LSHGTGWVTHR Trigger: CCGATGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTGCGTCCTGGAGCGGGATGGCTCGAGGTCTTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| CDS-3UTR GCA 90 bp | CACACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCAGCTGTGTCCCCCGTGTaGCACAGTGCGTTTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHTRSLCHHSPSGSGTPAVSPV*HSAFRS Trigger: GCTCCGAAACGCACTGTGGCACACGGGGGACACAGC...TGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCCCCACGAAACCGGGCTaGCAGGGGCCGCACTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FICLSSPGQTPLQRDARPPTKPG*QGPHWK Trigger: CTTCCAGTGCGGCCCCTGCCAGCCCGGTTTCGTGGG...GGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | TTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCCTGGCAGCCTGACGTCTaGTCGCCCACGAAACCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LFASPPQARHPFRGMPDPWQPDV*SPTKPG Trigger: GCCCGGTTTCGTGGGCGACCAGACGTCAGGCTGCCA...GGGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR TCA 90 bp | CCCACACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCGGACAGGCTTCGCAGTaGAAGCCAGGGCTGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: PTHTPVACATTVHQAAGPGQASQ*KPGLVL Trigger: CAATACCAGCCCTGGCTTTCACTGCGAAGCCTGTCC...GGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | CATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATCCACCCAGCGGGATCTaGCCCTGGCCTGTCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: HTYFICLSSPGQTPLQRDPPSGI*PWPVAR Trigger: GCGGGCGACAGGCCAGGGCCAGATCCCGCTGGGTGG...ATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR TCA 90 bp | TTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCGCGACACTGGCGCTCTaGGCAGCGAAGCTTCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: FICLSSPGQTPLQRDARPATLAL*AAKLLV Trigger: GACGAGAAGCTTCGCTGCTCAGAGCGCCAGTGTCGC...GGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | CACACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCATCACGCAGTTGTCCTTaGGACACTGGCGCTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHTRSLCHHSPSGSGTPSRSCP*DTGALS Trigger: GCTCAGAGCGCCAGTGTCGCAAGGACAACTGCGTGA...TGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | GTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGCAGCCGCACCTGGGATaGTGTGTCCCCCGTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLYLPLLPRPDTPSEGCQQPHLG*CVPRVP Trigger: TGGCACACGGGGGACACAGCATCCCAGGTGCGGCTG...CTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | ACACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACCGAGTTACGCTGGTCTaGGTTTCGAACCAGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: THTPVACATTVHQAAGPHRVTLV*VSNQRA Trigger: TGCCCGCTGGTTCGAAACCCAGACCAGCGTAACTCG...GTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | TATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCCCCTTGAGCTGAATCCCTaGCTCAGCCACAGCCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: YLPLLPRPDTPSEGCQTPLELNP*LSHSPE Trigger: TTCCGGGCTGTGGCTGAGCCAGGGATTCAGCTCAAG...GGGGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | ACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTGCTTGAGCTGAATCCCTaGCTCAGCCACAGCCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: THTRSLCHHSPSGSGTPLLELNP*LSHSPE Trigger: TTCCGGGCTGTGGCTGAGCCAGGGATTCAGCTCAAG...CAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | ACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCCACAGCAGCCGCACCTaGGATGCTGTGTCCCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TYFICLSSPGQTPLQRDAHSSRT*DAVSPV Trigger: CACGGGGGACACAGCATCCCAGGTGCGGCTGCTGTG...GGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR TCA 90 bp | GTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGAGGAGCCCCGGGTGTTaGCGCACACGGAGTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VLYLPLLPRPDTPSEGCQRSPGC*RTRSWE Trigger: TTCCCAACTCCGTGTGCGTCAACACCCGGGGCTCCT...CTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR TCA 90 bp | ACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGAACGCCGCTGGCAGCCTaGCGTCTGGTCGCCCACGAA | + |
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Preference number: 4 (lower is better) Translates to: TYVLYLPLLPRPDTPSEGTPLAA*RLVAHE Trigger: TTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGT...TCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR TCA 90 bp | CGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCATCCCGGGAGTCCTGGTaGCCATCCCCATCCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RTLFASPPQARHPFRGMPSRESW*PSPSWS Trigger: AGACCAGGATGGGGATGGTCACCAGGACTCCCGGGA...TGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | ACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGACGCTCAGGCCTGGAGTaGGTGCGGGCTGCATTCCGC | + |
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Preference number: 4 (lower is better) Translates to: TYVLYLPLLPRPDTPSEGRSGLE*VRAAFR Trigger: GCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCG...TCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | CATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATTCGGGGCAGAAGTGCTaGCCACGCCGCTGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTYFICLSSPGQTPLQRDSGQKC*PRRWQP Trigger: AGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGA...ATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | CTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCAGTTGGGATCGATCTaGGCATCACCCTCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYLPLLPRPDTPSEGCQTQLGSI*ASPSGS Trigger: GGACCCCGAGGGTGATGCGCAGATCGATCCCAACTG...GGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | ACACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACCGGTCATTGTCCTCTTaGCCAGGGTTAGGCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: THTPVACATTVHQAAGPHRSLSS*PGLGTK Trigger: CTTGGTGCCTAACCCTGGCCAAGAGGACAATGACCG...GTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | TTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCCAGCCCGGAAGGGATTaGCCTGCCAGTACGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FICLSSPGQTPLQRDARPQPGRD*PASTSA Trigger: AGCAGACGTACTGGCAGGCCAATCCCTTCCGGGCTG...GGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | TACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCACAGCAGCCGCACCTaGGATGCTGTGTCCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YVLYLPLLPRPDTPSEGCHSSRT*DAVSPV Trigger: CACGGGGGACACAGCATCCCAGGTGCGGCTGCTGTG...GCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR GCA 90 bp | ATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCAGCCGCACCTGGGATaGTGTGTCCCCCGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRTLFASPPQARHPFRGMQPHLG*CVPRVP Trigger: TGGCACACGGGGGACACAGCATCCCAGGTGCGGCTG...CATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | CGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCATTCTCGCAGCATCTGTaGGGCCAGGTCTCCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTLFASPPQARHPFRGMPFSQHL*GQVSTQ Trigger: CTGGGTGGAGACCTGGCCCCACAGATGCTGCGAGAA...TGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | CTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCACTGTTGGGTACTGTaGGGCAGTTGTCCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLPLLPRPDTPSEGCQTHCWVL*GSCPGS Trigger: ACTCCCGGGACAACTGCCCCACAGTACCCAACAGTG...GGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR TCA 90 bp | GTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGCGAAGTCCACGCCGTTaGAGGCTGTGTAACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLYLPLLPRPDTPSEGCQRSPRR*RLCNPQ Trigger: CTGTGGGTTACACAGCCTTCAACGGCGTGGACTTCG...CTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | ACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGACGGTCCACATCCTCCTaGCCCGAATTGGGCACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TYVLYLPLLPRPDTPSEGRSTSS*PELGTV Trigger: GACGGTGCCCAATTCGGGGCAGGAGGATGTGGACCG...TCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | TTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTGGTCCCTAGACTCTCTGCCTGCCAGTACGTCTaGTCCATCTGTTTCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LCHHSPSGSGTPLVPRLSACQYV*SICFHM Trigger: CATGTGGAAACAGATGGAGCAGACGTACTGGCAGGC...AGAGAGTCTAGGGACCAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212488.2 |
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| CDS-3UTR GCA 90 bp | ACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGACCCCGTGTGCCACAGTaGGTTTCGGAGCTGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TYVLYLPLLPRPDTPSEGPRVPQ*VSELFP Trigger: GGGGAACAGCTCCGAAACGCACTGTGGCACACGGGG...TCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | CCACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGCCTCCTGCCCCGAATTaGGCACCGTCACGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHTYFICLSSPGQTPLQRPPAPN*APSRSC Trigger: ACAACTGCGTGACGGTGCCCAATTCGGGGCAGGAGG...CCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | TTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCCCATCACTGTCACTCTaGTCAAAGTTGGGCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FICLSSPGQTPLQRDARPPSLSL*SKLGTR Trigger: CCGGGTGCCCAACTTTGACCAGAGTGACAGTGATGG...GGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | TTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCTCCAACACAACCGTCTaGAAGGCCCTGAAGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FICLSSPGQTPLQRDARPSNTTV*KALKSV Trigger: CACCGACTTCAGGGCCTTCCAGACGGTTGTGTTGGA...GGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
||
| CDS-3UTR CCA 90 bp | TACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGCCCGGAAGGGATTaGCCTGCCAGTACGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YVLYLPLLPRPDTPSEGCQPGRD*PASTSA Trigger: AGCAGACGTACTGGCAGGCCAATCCCTTCCGGGCTG...GCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCGATCGTCATTCTTCTTaGACCGGCAGTTGTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLPLLPRPDTPSEGCQTDRHSS*TGSCRR Trigger: CCTGCGACAACTGCCGGTCCAAGAAGAATGACGATC...GGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR TCA 90 bp | ACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCACGATCTCCATTCCCTaGTTGAGCACCACCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TYFICLSSPGQTPLQRDATISIP*LSTTQL Trigger: CAACTGGGTGGTGCTCAATCAGGGAATGGAGATCGT...GGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | GTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGGCCTGCCAGTACGTCTaGTCCATCTGTTTCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: VLYLPLLPRPDTPSEGCQACQYV*SICFHM Trigger: CATGTGGAAACAGATGGAGCAGACGTACTGGCAGGC...CTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CCA 90 bp | CCACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGCAGTTTGCTTTCTCATaGCACGGGCTGGGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTYFICLSSPGQTPLQRQFAFS*HGLGDP Trigger: TGGGTCACCCAGCCCGTGCCATGAGAAAGCAAACTG...CCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | GTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGTGTTTACATGGAATGTaGCCTCGAAGTCCACGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLYLPLLPRPDTPSEGCQCLHGM*PRSPRR Trigger: ACGGCGTGGACTTCGAGGGCACATTCCATGTAAACA...CTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | CATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATCACTCTGGTCAAAGTTaGGCACCCGGGGACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTYFICLSSPGQTPLQRDHSGQS*APGDSC Trigger: ACAACTGTCCCCGGGTGCCCAACTTTGACCAGAGTG...ATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | TTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCTCTGGGTTATCTTTCTaGGGACAGTTGTCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FICLSSPGQTPLQRDARPSGLSF*GQLSQA Trigger: TGCCTGTGACAACTGTCCCCAGAAAGATAACCCAGA...GGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR TCA 90 bp | ATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGTCTCCATTCCCTGATTaGGCACCACCCAGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRTLFASPPQARHPFRGMSPFPD*APPSWD Trigger: ATCCCAACTGGGTGGTGCTCAATCAGGGAATGGAGA...CATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR GCA 90 bp | CATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATTTGGGAACGCAATTGTaGTGCCCGGTCTCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTYFICLSSPGQTPLQRDLGTQL*CPVSHS Trigger: TGAGTGTGAGACCGGGCAGCACAATTGCGTTCCCAA...ATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | CCACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGCACATCCCTCTGGTCTaGGTTATCTTTCTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PHTYFICLSSPGQTPLQRHIPLV*VIFLGT Trigger: TGTCCCCAGAAAGATAACCCAGACCAGAGGGATGTG...CCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CCA 90 bp | CATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATTCACCCACAAAGTCGTaGTCCACATCCCTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTYFICLSSPGQTPLQRDSPTKS*STSLWS Trigger: AGACCAGAGGGATGTGGACCACGACTTTGTGGGTGA...ATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 90 bp | GCAGACTACGCCGGGGAAGCAGGAGCCGGGTGCGCAGAGCGGCACTaGCCGCACGCTCAGGCCTGGAGTGCGTGCGGGCTGCATTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ADYAGEAGAGCAERH*PHAQAWSACGLHSA Trigger: TGCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCGCACCCGGCTCCTGCTTCCCCGGCGTAGTCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 90 bp | CGTAGCTGTCTCGGAGCAGACTACGCCGGGGAAGCAGGAGCCGGGTaGGCAGAGCGGCACTGGCCGCACGCTCAGGCCTGGAGTGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSCLGADYAGEAGAG*AERHWPHAQAWSAC Trigger: GCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCGCACCCGGCTCCTGCTTCCCCGGCGTAGTCTGCTCCGAGACAGCTACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 90 bp | GTCCGTGTCGCGGCCGCACAGGAGCCCGTTGCCGGCCCAGCCAACTaGACACACGCAAGACCTCGAGCCATCCCGCTCCAGGACGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRVAAAQEPVAGPAN*THARPRAIPLQDAV Trigger: AACTGCGTCCTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGGCAACGGGCTCCTGTGCGGCCGCGACACGGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 90 bp | CAGGAAAACCGTCCAGGTCCGTGTCGCGGCCGCACAGGAGCCCGTTaGCGGCCCAGCCAACTGCACACACGCAAGACCTCGAGCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: QENRPGPCRGRTGAR*RPSQLHTRKTSSHP Trigger: GGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGGCAACGGGCTCCTGTGCGGCCGCGACACGGACCTGGACGGTTTTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 90 bp | GCAGGAGCCGGGTGCGCAGAGCGGCACTGGCCGCACGCTCAGGCCTaGAGTGCGTGCGGGCTGCATTCCGCAAGCATCACATTCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGAGCAERHWPHAQA*SACGLHSASITFHH Trigger: GTGATGGAATGTGATGCTTGCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCGCACCCGGCTCCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | CACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTGGTCCCGCACAGGAGCCCGTaGCCGGCCCAGCCAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTRSLCHHSPSGSGTPLVPHRSP*PAQPTA Trigger: TGCAGTTGGCTGGGCCGGCAACGGGCTCCTGTGCGG...GACCAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 90 bp | GTCTTGCAGCGCCGCATTAGTCTCCTGAAGTTCTCGCAGCATCTGTaGGGCCAGGTCTCCACCCAGCGGGATCTGGCCCTGGCCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VLQRRISLLKFSQHL*GQVSTQRDLALACR Trigger: GCGACAGGCCAGGGCCAGATCCCGCTGGGTGGAGACCTGGCCCCACAGATGCTGCGAGAACTTCAGGAGACTAATGCGGCGCTGCAAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | CACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTGGTCAAGGAGCCCCGGGTGTaGACGCACACGGAGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HTRSLCHHSPSGSGTPLVKEPRV*THTELG Trigger: TCCCAACTCCGTGTGCGTCAACACCCGGGGCTCCTT...GACCAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | CACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTGGTCTCCTCCTGCCCCGAATaGGGCACCGTCACGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTRSLCHHSPSGSGTPLVSSCPE*GTVTQL Trigger: CAACTGCGTGACGGTGCCCAATTCGGGGCAGGAGGA...GACCAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | ACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTGGTCCGAGTTGGGAACGCAATaGTGCTGCCCGGTCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TPVACATTVHQAAGPHWSELGTQ*CCPVSH Trigger: GTGTGAGACCGGGCAGCACAATTGCGTTCCCAACTC...GGACCAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 90 bp | TGTCGCAACAGCTCTCTCACGTCTTGCAGCGCCGCATTAGTCTCCTaGAGTTCTCGCAGCATCTGTGGGGCCAGGTCTCCACCCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRNSSLTSCSAALVS*SSRSICGARSPPSG Trigger: CCCGCTGGGTGGAGACCTGGCCCCACAGATGCTGCGAGAACTTCAGGAGACTAATGCGGCGCTGCAAGACGTGAGAGAGCTGTTGCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 90 bp | AAGCCAGGGCTGGTATTGATGCACCGCACCCGCGGGAAACAGGGGTaGGCATTGCACTCATTAACGTCGGTGCAGTGCGAGCCGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KPGLVLMHRTRGKQG*ALHSLTSVQCEPLP Trigger: CGGCAACGGCTCGCACTGCACCGACGTTAATGAGTGCAATGCTCACCCCTGTTTCCCGCGGGTGCGGTGCATCAATACCAGCCCTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
||
| CDS GCA 90 bp | CAGAGCGGCACTGGCCGCACGCTCAGGCCTGGAGTGCGTGCGGGCTaGATTCCGCAAGCATCACATTCCATCACCGTATTCTTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSGTGRTLRPGVRAG*IPQASHSITVFFRK Trigger: CTTCCTGAAGAATACGGTGATGGAATGTGATGCTTGCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
||
| CDS-3UTR CAA 90 bp | TTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCCTCCTGCTGGGCACTGTaGGGTACTGTGGGGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFASPPQARHPFRGMPDPSCWAL*GTVGQL Trigger: CAACTGCCCCACAGTACCCAACAGTGCCCAGCAGGA...GGGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
||
| CDS TCA 90 bp | TCGTCGTCGCAGGCATCGCCCCGGCCATCCAGGTCTGTATCTTTCTaGTCGTCATTCTTCTTGGACCGGCAGTTGTCGCAGGCATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSQASPRPSRSVSF*SSFFLDRQLSQASP Trigger: GGGAGATGCCTGCGACAACTGCCGGTCCAAGAAGAATGACGATCAGAAAGATACAGACCTGGATGGCCGGGGCGATGCCTGCGACGACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
||
| CDS-3UTR CAA 90 bp | ACACACACCCGTAGCTTGTGCCACCACAGTCCATCAGGCAGCGGGACCCCACTGTCTTTCTGGGGACAGTaGTCACAGGCATCCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: THTRSLCHHSPSGSGTPLSFWGQ*SQASPT Trigger: TGTTGGGGATGCCTGTGACAACTGTCCCCAGAAAGA...CAGTGGGGTCCCGCTGCCTGATGGACTGTGGTGGCACAAGCTACGGGTGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCATCAGGCAGCGGGACCCCACTGGTCCCTAGACTCTCTGCAGCCGGTGGAAACTGGAGCTGTCTaGGTAGCCGAAGATGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: TVHQAAGPHWSLDSLQPVETGAV*VAEDET Trigger: GGTTTCATCTTCGGCTACCAAGACAGCTCCAGTTTC...CACCGGCTGCAGAGAGTCTAGGGACCAGTGGGGTCCCGCTGCCTGATGGACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212488.2 |
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| CDS-3UTR CAA 90 bp | ACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGAACAGCCCGGAAGGGATaGGCCTGCCAGTACGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TYVLYLPLLPRPDTPSEGTARKG*ACQYVC Trigger: GCAGACGTACTGGCAGGCCAATCCCTTCCGGGCTGT...TCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS-3UTR CAA 90 bp | ATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGACAGCCCGGAAGGGATaGGCCTGCCAGTACGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: IRTLFASPPQARHPFRGMTARKG*ACQYVC Trigger: GCAGACGTACTGGCAGGCCAATCCCTTCCGGGCTGT...CATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS CCA 90 bp | GTCGCAGGCATCTCCCCACTTATCACTGTCCGAGTTACGCTGGTCTaGGTTTCGAACCAGCGGGCAATTGTCTTGCTCGTTAGGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: VAGISPLITVRVTLV*VSNQRAIVLLVRDS Trigger: GGAGTCCCTAACGAGCAAGACAATTGCCCGCTGGTTCGAAACCCAGACCAGCGTAACTCGGACAGTGATAAGTGGGGAGATGCCTGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 90 bp | CGCCCCGGCCATCCAGGTCTGTATCTTTCTGATCGTCATTCTTCTTaGACCGGCAGTTGTCGCAGGCATCTCCCCACTTATCACTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: RPGHPGLYLSDRHSS*TGSCRRHLPTYHCP Trigger: CGGACAGTGATAAGTGGGGAGATGCCTGCGACAACTGCCGGTCCAAGAAGAATGACGATCAGAAAGATACAGACCTGGATGGCCGGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 90 bp | AAGCCAGGGCTGGTATTGATGCACCGCACCCGCGGGAAACAGGGGTaGGCATTGCACGCAAGCATCACATTCCATCACCGTATTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: KPGLVLMHRTRGKQG*ALHASITFHHRILQ Trigger: CTGAAGAATACGGTGATGGAATGTGATGCTTGCGTGCAATGCTCACCCCTGTTTCCCGCGGGTGCGGTGCATCAATACCAGCCCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213072.2 |
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| CDS CCA 90 bp | CAGTTGTCGCAGGCATCTCCCCACTTATCACTGTCCGAGTTACGCTaGTCTGGGTTTCGAACCAGCGGGCAATTGTCTTGCTCGTTAGGG | + |
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Preference number: 5 (lower is better) Translates to: QLSQASPHLSLSELR*SGFRTSGQLSCSLG Trigger: CCCTAACGAGCAAGACAATTGCCCGCTGGTTCGAAACCCAGACCAGCGTAACTCGGACAGTGATAAGTGGGGAGATGCCTGCGACAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | TTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGACCCGTGTCCAACACCACATaGCTGTCAGCTACTAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FICLSSPGQTPLQRDARPVSNTT*LSATSS Trigger: TGAGCTAGTAGCTGACAGCAATGTGGTGTTGGACAC...GGGTCTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 90 bp | CACACATCGATCTTGTCTATAACCTTGTCAGCATCGAAGTCACCCTaGCACGCGTCACCCACGCCATCCCGGTCATTGTCCTCTTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: HTSILSITLSASKSP*HASPTPSRSLSSWP Trigger: TGGCCAAGAGGACAATGACCGGGATGGCGTGGGTGACGCGTGTCAGGGTGACTTCGATGCTGACAAGGTTATAGACAAGATCGATGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | CATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATTTGACGCACACGGAGTaGGGAACGCAATTGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HTYFICLSSPGQTPLQRDLTHTE*GTQLCC Trigger: GCAGCACAATTGCGTTCCCAACTCCGTGTGCGTCAA...ATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | ACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCGAAACTGGAGCTGTCTaGGTAGCCGAAGATGAAACC | + |
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Preference number: 5 (lower is better) Translates to: TYFICLSSPGQTPLQRDAETGAV*VAEDET Trigger: GGTTTCATCTTCGGCTACCAAGACAGCTCCAGTTTC...GGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS CCA 90 bp | CCATCCTGGTCTTGGTCACTATCACAGGCATCACCCACAAAGTCGTaGTCCACATCCCTCTGGTCTGGGTTATCTTTCTGGGGACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: PSWSWSLSQASPTKS*STSLWSGLSFWGQL Trigger: CAACTGTCCCCAGAAAGATAACCCAGACCAGAGGGATGTGGACCACGACTTTGTGGGTGATGCCTGTGATAGTGACCAAGACCAGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS-3UTR CAA 90 bp | GTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGATGCCAGTCAGGAACTCCGTCATaGTCATCATCGTCATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VLYLPLLPRPDTPSEGCQSGTPS*SSSSSQ Trigger: CTGTGATGACGATGATGACAATGACGGAGTTCCTGA...CTGGCATCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 90 bp | TCACATTCCATCACCGTATTCTTCAGGAAGGTGATCTCCTTGACCTaGTGTCGCAACAGCTCTCTCACGTCTTGCAGCGCCGCATTAGTC | + |
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Preference number: 5 (lower is better) Translates to: SHSITVFFRKVISLT*CRNSSLTSCSAALV Trigger: GACTAATGCGGCGCTGCAAGACGTGAGAGAGCTGTTGCGACAGCAGGTCAAGGAGATCACCTTCCTGAAGAATACGGTGATGGAATGTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000213072.2 |
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| CDS-3UTR CAA 90 bp | ACATACGTACTTTATTTGCCTCTCCTCCCCAGGCCAGACACCCCTTCAGAGGGAGGGCACACATCGATCTaGTCTATAACCTTGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TYVLYLPLLPRPDTPSEGGHTSI*SITLSA Trigger: TGCTGACAAGGTTATAGACAAGATCGATGTGTGCCC...TCCCTCTGAAGGGGTGTCTGGCCTGGGGAGGAGAGGCAAATAAAGTACGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | GCCGGGGAAGCAGGAGCCGGGTGCGCAGAGCGGCACTaGCCGCACGCTCAGGCCTGGAGTGCGTGCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AGEAGAGCAERH*PHAQAWSACGL Trigger: CAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCGCACCCGGCTCCTGCTTCCCCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 72 bp | CTCGGAGCAGACTACGCCGGGGAAGCAGGAGCCGGGTaGGCAGAGCGGCACTGGCCGCACGCTCAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LGADYAGEAGAG*AERHWPHAQAW Trigger: CCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCGCACCCGGCTCCTGCTTCCCCGGCGTAGTCTGCTCCGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 72 bp | GCGGCCGCACAGGAGCCCGTTGCCGGCCCAGCCAACTaGACACACGCAAGACCTCGAGCCATCCCGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AAAQEPVAGPAN*THARPRAIPLQ Trigger: CTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGGCAACGGGCTCCTGTGCGGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 72 bp | CGTCCAGGTCCGTGTCGCGGCCGCACAGGAGCCCGTTaGCGGCCCAGCCAACTGCACACACGCAAGACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RPGPCRGRTGAR*RPSQLHTRKTS Trigger: CGAGGTCTTGCGTGTGTGCAGTTGGCTGGGCCGGCAACGGGCTCCTGTGCGGCCGCGACACGGACCTGGACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | GGGTGCGCAGAGCGGCACTGGCCGCACGCTCAGGCCTaGAGTGCGTGCGGGCTGCATTCCGCAAGCATCACA | + |
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Preference number: 6 (lower is better) Translates to: GCAERHWPHAQA*SACGLHSASIT Trigger: TGTGATGCTTGCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCGCACCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 72 bp | CGCAGAGCGGCACTGGCCGCACGCTCAGGCCTGGAGTaGGTGCGGGCTGCATTCCGCAAGCATCACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: RRAALAARSGLE*VRAAFRKHHIP Trigger: TGGAATGTGATGCTTGCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 72 bp | GAGCGGCACTGGCCGCACGCTCAGGCCTGGAGTGCGTaGGGGCTGCATTCCGCAAGCATCACATTCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: ERHWPHAQAWSA*GLHSASITFHH Trigger: GTGATGGAATGTGATGCTTGCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | CGATGCCGTCCCGGTCCACATCCTCCTGCCCCGAATTaGGCACCGTCACGCAGTTGTCCTTGCGACACTGGC | + |
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Preference number: 6 (lower is better) Translates to: RCRPGPHPPAPN*APSRSCPCDTG Trigger: GCCAGTGTCGCAAGGACAACTGCGTGACGGTGCCCAATTCGGGGCAGGAGGATGTGGACCGGGACGGCATCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 72 bp | CCGATGCCGTCCCGGTCCACATCCTCCTGCCCCGAATaGGGCACCGTCACGCAGTTGTCCTTGCGACACTGG | + |
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Preference number: 6 (lower is better) Translates to: PMPSRSTSSCPE*GTVTQLSLRHW Trigger: CCAGTGTCGCAAGGACAACTGCGTGACGGTGCCCAATTCGGGGCAGGAGGATGTGGACCGGGACGGCATCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | CGCCGCATTAGTCTCCTGAAGTTCTCGCAGCATCTGTaGGGCCAGGTCTCCACCCAGCGGGATCTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RRISLLKFSQHL*GQVSTQRDLAL Trigger: CAGGGCCAGATCCCGCTGGGTGGAGACCTGGCCCCACAGATGCTGCGAGAACTTCAGGAGACTAATGCGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | TTGTTGGACTTAGCGAAGGTCAGTCCCACGCCCTCGTaGGTGGGTCCGCTGAACCCAGGGGGACAGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLDLAKVSPTPS*VGPLNPGGQAS Trigger: CGAAGCCTGTCCCCCTGGGTTCAGCGGACCCACCCACGAGGGCGTGGGACTGACCTTCGCTAAGTCCAACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 72 bp | GGGGACAGGCTTCGCAGTGAAAGCCAGGGCTGGTATTaGTGCACCGCACCCGCGGGAAACAGGGGTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GDRLRSESQGWY*CTAPAGNRGEH Trigger: ATGCTCACCCCTGTTTCCCGCGGGTGCGGTGCATCAATACCAGCCCTGGCTTTCACTGCGAAGCCTGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000213072.2 |
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| CDS CAA 72 bp | ACATCCTCCTGCCCCGAATTGGGCACCGTCACGCAGTaGTCCTTGCGACACTGGCGCTCTGAGCAGCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TSSCPELGTVTQ*SLRHWRSEQRS Trigger: GCTTCGCTGCTCAGAGCGCCAGTGTCGCAAGGACAACTGCGTGACGGTGCCCAATTCGGGGCAGGAGGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 72 bp | TCCCCGGGACCTGTAGAGGACTTGACAGCCTTGAGCTaGATCCCTGGCTCAGCCACAGCCCGGAAGGGATTG | + |
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Preference number: 6 (lower is better) Translates to: SPGPVEDLTALS*IPGSATARKGL Trigger: CAATCCCTTCCGGGCTGTGGCTGAGCCAGGGATTCAGCTCAAGGCTGTCAAGTCCTCTACAGGTCCCGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000212488.2 |
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| CDS CAA 72 bp | ACGCTGGTCTGGGTTTCGAACCAGCGGGCAATTGTCTaGCTCGTTAGGGACTCCATCCCCGTCCGCATCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TLVWVSNQRAIV*LVRDSIPVRIR Trigger: CCGGATGCGGACGGGGATGGAGTCCCTAACGAGCAAGACAATTGCCCGCTGGTTCGAAACCCAGACCAGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 72 bp | CACCGTCACGCAGTTGTCCTTGCGACACTGGCGCTCTaGGCAGCGAAGCTTCTCGTCAGGAAAACCGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HRHAVVLATLAL*AAKLLVRKTVQ Trigger: CTGGACGGTTTTCCTGACGAGAAGCTTCGCTGCTCAGAGCGCCAGTGTCGCAAGGACAACTGCGTGACGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS GCA 72 bp | GGCGGCCACCACGCATGGCCGTGTCCAACACCACATTaGTGTCAGCTACTAGCTCAGGACCCTCATAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: GGHHAWPCPTPH*CQLLAQDPHRT Trigger: GGTTCTATGAGGGTCCTGAGCTAGTAGCTGACAGCAATGTGGTGTTGGACACGGCCATGCGTGGTGGCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 90 bp | TCACTGTCCGAGTTACGCTGGTCTGGGTTTCGAACCAGCGGGCAATaGTCTTGCTCGTTAGGGACTCCATCCCCGTCCGCATCCGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSELRWSGFRTSGQ*SCSLGTPSPSASGS Trigger: TGACCCGGATGCGGACGGGGATGGAGTCCCTAACGAGCAAGACAATTGCCCGCTGGTTCGAAACCCAGACCAGCGTAACTCGGACAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 72 bp | AGCTCTCTCACGTCTTGCAGCGCCGCATTAGTCTCCTaGAGTTCTCGCAGCATCTGTGGGGCCAGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSLTSCSAALVS*SSRSICGARSP Trigger: TGGAGACCTGGCCCCACAGATGCTGCGAGAACTTCAGGAGACTAATGCGGCGCTGCAAGACGTGAGAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 72 bp | CTGGTATTGATGCACCGCACCCGCGGGAAACAGGGGTaGGCATTGCACTCATTAACGTCGGTGCAGTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVLMHRTRGKQG*ALHSLTSVQCE Trigger: CTCGCACTGCACCGACGTTAATGAGTGCAATGCTCACCCCTGTTTCCCGCGGGTGCGGTGCATCAATACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 72 bp | GAGTTACGCTGGTCTGGGTTTCGAACCAGCGGGCAATaGTCTTGCTCGTTAGGGACTCCATCCCCGTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ELRWSGFRTSGQ*SCSLGTPSPSA Trigger: TGCGGACGGGGATGGAGTCCCTAACGAGCAAGACAATTGCCCGCTGGTTCGAAACCCAGACCAGCGTAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 72 bp | CAGGCATCGCCCCGGCCATCCAGGTCTGTATCTTTCTaGTCGTCATTCTTCTTGGACCGGCAGTTGTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QASPRPSRSVSF*SSFFLDRQLSQ Trigger: CTGCGACAACTGCCGGTCCAAGAAGAATGACGATCAGAAAGATACAGACCTGGATGGCCGGGGCGATGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS TCA 72 bp | TGTTTACATGGAATGTGCCCTCGAAGTCCACGCCGTTaGAGGCTGTGTAACCCACAGCCAGGCCAGGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLHGMCPRSPRR*RLCNPQPGQGH Trigger: GTGACCCTGGCCTGGCTGTGGGTTACACAGCCTTCAACGGCGTGGACTTCGAGGGCACATTCCATGTAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | CAGGCATCTCCCCACTTATCACTGTCCGAGTTACGCTaGTCTGGGTTTCGAACCAGCGGGCAATTGTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QASPHLSLSELR*SGFRTSGQLSC Trigger: GCAAGACAATTGCCCGCTGGTTCGAAACCCAGACCAGCGTAACTCGGACAGTGATAAGTGGGGAGATGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 72 bp | TTGTCCTCTTGGCCAGGGTTAGGCACCAAGCGGCAGTaGTCCCGGCTATCAGGAACTCCGTCATTGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSWPGLGTKRQ*SRLSGTPSLSS Trigger: TGATGACAATGACGGAGTTCCTGATAGCCGGGACAACTGCCGCTTGGTGCCTAACCCTGGCCAAGAGGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 90 bp | CAAGCATCACATTCCATCACCGTATTCTTCAGGAAGGTGATCTCCTaGACCTGCTGTCGCAACAGCTCTCTCACGTCTTGCAGCGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QASHSITVFFRKVIS*TCCRNSSLTSCSAA Trigger: TGCGGCGCTGCAAGACGTGAGAGAGCTGTTGCGACAGCAGGTCAAGGAGATCACCTTCCTGAAGAATACGGTGATGGAATGTGATGCTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000213072.2 |
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| CDS CAA 90 bp | TCACCATCACTGTCACTCTGGTCAAAGTTGGGCACCCGGGGACAGTaGTCAGCTACATTTCGTATTCGGTCGCCATCTATGTCGTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPSLSLWSKLGTRGQ*SATFRIRSPSMSSS Trigger: CGACGACGACATAGATGGCGACCGAATACGAAATGTAGCTGACAACTGTCCCCGGGTGCCCAACTTTGACCAGAGTGACAGTGATGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | ATCTCCCCACTTATCACTGTCCGAGTTACGCTGGTCTaGGTTTCGAACCAGCGGGCAATTGTCTTGCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: ISPLITVRVTLV*VSNQRAIVLLV Trigger: AACGAGCAAGACAATTGCCCGCTGGTTCGAAACCCAGACCAGCGTAACTCGGACAGTGATAAGTGGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 72 bp | CCAACACCATCACCATCACTGTCACTCTGGTCAAAGTaGGGCACCCGGGGACAGTTGTCAGCTACATTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PTPSPSLSLWSK*GTRGQLSATFR Trigger: ACGAAATGTAGCTGACAACTGTCCCCGGGTGCCCAACTTTGACCAGAGTGACAGTGATGGTGATGGTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CCA 72 bp | TCTTGGTCACTATCACAGGCATCACCCACAAAGTCGTaGTCCACATCCCTCTGGTCTGGGTTATCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWSLSQASPTKS*STSLWSGLSFW Trigger: CCAGAAAGATAACCCAGACCAGAGGGATGTGGACCACGACTTTGTGGGTGATGCCTGTGATAGTGACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 72 bp | CATTCCATCACCGTATTCTTCAGGAAGGTGATCTCCTaGACCTGCTGTCGCAACAGCTCTCTCACGTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HSITVFFRKVIS*TCCRNSSLTSC Trigger: GCAAGACGTGAGAGAGCTGTTGCGACAGCAGGTCAAGGAGATCACCTTCCTGAAGAATACGGTGATGGAATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003659.9 ENSMUST00000213072.2 |
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| CDS CAA 72 bp | CCGGTCTCACACTCATTAATATCCGTGCAAACTTGTTaGTTGGACTTAGCGAAGGTCAGTCCCACGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PVSHSLISVQTC*LDLAKVSPTPS Trigger: CGAGGGCGTGGGACTGACCTTCGCTAAGTCCAACAAACAAGTTTGCACGGATATTAATGAGTGTGAGACCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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| CDS CAA 72 bp | GTCTCACACTCATTAATATCCGTGCAAACTTGTTTGTaGGACTTAGCGAAGGTCAGTCCCACGCCCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSHSLISVQTCL*DLAKVSPTPSW Trigger: CCACGAGGGCGTGGGACTGACCTTCGCTAAGTCCAACAAACAAGTTTGCACGGATATTAATGAGTGTGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003659.9 |
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