Pregenerated sensors for COMMD10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042705Ensembl transcript IDs: ENSMUST00000049388.9, ENSMUST00000234085.2, ENSMUST00000234124.2, ENSMUST00000234280.2, ENSMUST00000234701.2, ENSMUST00000234944.2, ENSMUST00000234961.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGCAGGTTAAGCTGCCATCCCACTGTC | + |
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Preference number: 1 (lower is better) Translates to: LTPSCSTAWGDCSFA*AEWAICRLSCHPTV Trigger: GACAGTGGGATGGCAGCTTAACCTGCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR GCA 90 bp | CTTGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTaGTTGAGCAGAGTGGGCCATTTGCAGGTTAAGCTGCCATCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LAHSQLQHGLGRLQL*LSRVGHLQVKLPSH Trigger: GTGGGATGGCAGCTTAACCTGCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR CCA 90 bp | GGCAGGCGTTCTTCTAAATATTCAGCACTATCAGGAACCAGATCTTaGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACGGCCTGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: GRRSSKYSALSGTRS*RLPCSLPVAARPGE Trigger: CTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTGCTGAATATTTAGAAGAACGCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR GCA 90 bp | TCTAAATATTCAGCACTATCAGGAACCAGATCTTGGCGTCTTCCTTaGTCACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: SKYSALSGTRSWRLP*SLPVAARPGETAAL Trigger: CAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTGCTGAATATTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR GCA 90 bp | GTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTaGGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAAGGAAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: VTESSRKYTWAVSLQ*ERVRWPECDGEGSQ Trigger: CTGGCTTCCTTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| 3UTR TCA 90 bp | AAACCAAGAGACAGCCTACACTCTAGGAACCAGTGGTTAATGATGTaGGAGATGGGAGTCAGACTAATCCCTCAGCAACGCTCTTTCGAC | + |
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Preference number: 1 (lower is better) Translates to: KPRDSLHSRNQWLMM*EMGVRLIPQQRSFD Trigger: GTCGAAAGAGCGTTGCTGAGGGATTAGTCTGACTCCCATCTCTCACATCATTAACCACTGGTTCCTAGAGTGTAGGCTGTCTCTTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR TCA 90 bp | CTTCTTACTTCTTTCGTTTTTCTCAACAATTGCTCTTGGCTCCTGTaGGGCGAGAAGGCACACTCGAAACCCAGTGCTCCTATTGTGATC | + |
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Preference number: 1 (lower is better) Translates to: LLTSFVFLNNCSWLL*GEKAHSKPSAPIVI Trigger: GATCACAATAGGAGCACTGGGTTTCGAGTGTGCCTTCTCGCCTCACAGGAGCCAAGAGCAATTGTTGAGAAAAACGAAAGAAGTAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR TCA 90 bp | ACTGCATCCTGTAGTTACTCTTCCAGTAAAACAGCATGTGCTGTCTaGAATTGCTATGGGATCCTGGGAGCTCATTGCAAGAATGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: TASCSYSSSKTACAV*NCYGILGAHCKNEF Trigger: GAACTCATTCTTGCAATGAGCTCCCAGGATCCCATAGCAATTTCAGACAGCACATGCTGTTTTACTGGAAGAGTAACTACAGGATGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR TCA 90 bp | GGAAGGGTAGACTCGTCATTTGGTAGGGGAAAAGACAACAAGATTTaGTTTCACGGTCGCTCCAGCAATAATAGCATAATCTTATCCGTT | + |
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Preference number: 1 (lower is better) Translates to: GRVDSSFGRGKDNKI*FHGRSSNNSIILSV Trigger: AACGGATAAGATTATGCTATTATTGCTGGAGCGACCGTGAAATCAAATCTTGTTGTCTTTTCCCCTACCAAATGACGAGTCTACCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR TCA 90 bp | CTAGGTGCTCAGAAATCATTTGCTAAATTAGCAAACAGTAGGTGTTaGGCTTCCACACACCACAGAGACAAAATTACTGGTAGTGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: LGAQKSFAKLANSRC*ASTHHRDKITGSGC Trigger: GCAACCACTACCAGTAATTTTGTCTCTGTGGTGTGTGGAAGCTCAACACCTACTGTTTGCTAATTTAGCAAATGATTTCTGAGCACCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR TCA 90 bp | TCAGCTGACATCCATCTTCACCAAACACTTTACAGACATTTGTACTaGGAGTACAATTCCAGAACCACAGAGCTTACAAACAGAGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: SADIHLHQTLYRHLY*EYNSRTTELTNRAY Trigger: GTAAGCTCTGTTTGTAAGCTCTGTGGTTCTGGAATTGTACTCTCAGTACAAATGTCTGTAAAGTGTTTGGTGAAGATGGATGTCAGCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
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| 3UTR GCA 90 bp | GGGATGAACTCACAGCAGTACTGGTACCATTTTAGATTTCTTTCTTaGACTATACTTCAAGCAAAAGAACACTGCAGGACAAATGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: GMNSQQYWYHFRFLS*TILQAKEHCRTNAK Trigger: TTTGGCATTTGTCCTGCAGTGTTCTTTTGCTTGAAGTATAGTGCAAGAAAGAAATCTAAAATGGTACCAGTACTGCTGTGAGTTCATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR TCA 90 bp | AGCAATAATAGCATAATCTTATCCGTTTGCAGCAAATACACAATCTaGAGCATTCAACCTCCCATAAAGGTATATCGCCTTCACTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: SNNSIILSVCSKYTI*SIQPPIKVYRLHCS Trigger: GCTACAGTGAAGGCGATATACCTTTATGGGAGGTTGAATGCTTCAGATTGTGTATTTGCTGCAAACGGATAAGATTATGCTATTATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR TCA 90 bp | ATTGCTATGGGATCCTGGGAGCTCATTGCAAGAATGAGTTCTAGTTaGTCATCTTTTTCAATATCATATACCATGACCTCCACAGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: IAMGSWELIARMSSS*SSFSISYTMTSTVN Trigger: ATTTACTGTGGAGGTCATGGTATATGATATTGAAAAAGATGATCAACTAGAACTCATTCTTGCAATGAGCTCCCAGGATCCCATAGCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR CAA 90 bp | GCTCACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTaGAGCAGAGTGGGCCATTTGCAGGTTAAGCTGCCATCCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: AHSQLQHGLGRLQLC*SRVGHLQVKLPSHC Trigger: ACAGTGGGATGGCAGCTTAACCTGCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR CAA 90 bp | CACTATCAGGAACCAGATCTTGGCGTCTTCCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTGAGCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: HYQEPDLGVFLAHSQ*QHGLGRLQLCLSRV Trigger: CACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGGAGTCAGACTAATCCCTCAGCAACGCTCTTTCGACAATACATGGCAGCAGGAAGCCAGACGAACTaGGGACACTGGAGCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: DGSQTNPSATLFRQYMAAGSQTN*GHWSRS Trigger: GCTCCTGCTCCAGTGTCCTCAGTTCGTCTGGCTTCC...TGCTGCCATGTATTGTCGAAAGAGCGTTGCTGAGGGATTAGTCTGACTCCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAAGCAAAAGAACACTGCAGGACAAATGCCAAAACATTTGACGGCCTGCGGTGCTCTTGGCTCCTGTaGGGCGAGAAGGCACACTCG | + |
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Preference number: 2 (lower is better) Translates to: LQAKEHCRTNAKTFDGLRCSWLL*GEKAHS Trigger: CGAGTGTGCCTTCTCGCCTCACAGGAGCCAAGAGCA...CCGCAGGCCGTCAAATGTTTTGGCATTTGTCCTGCAGTGTTCTTTTGCTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR-3UTR CCA 90 bp | TCTATGCCCCAGTACAGGGGAACGTCAGAGCCAAGAAGCAGGAGTGGGAGGGTTTCTAGAAAATATACTTaGGCAGTCTCTCTTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: SMPQYRGTSEPRSRSGRVSRKYT*AVSLQC Trigger: GCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGA...AACCCTCCCACTCCTGCTTCTTGGCTCTGACGTTCCCCTGTACTGGGGCATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGGAGTCAGACTAATCCCTCAGCAACGCTCTTTCGACAATACATGGCAGCATGTCCTTTCACCAACTaGCTTGTCTCCTCTGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: DGSQTNPSATLFRQYMAACPFTN*LVSSGL Trigger: TAACCCAGAGGAGACAAGTCAGTTGGTGAAAGGACA...TGCTGCCATGTATTGTCGAAAGAGCGTTGCTGAGGGATTAGTCTGACTCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTGAAATTGCTATGGGATCCTGGGAGCTCATTGCAAGAATGAGTTCTAGTGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: LSEIAMGSWELIARMSSSDCSFA*AEWAIC Trigger: GCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTC...ACTAGAACTCATTCTTGCAATGAGCTCCCAGGATCCCATAGCAATTTCAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR CAA 90 bp | ATGGCATTCACTTCTTACTTCTTTCGTTTTTCTCAACAATTGCTCTaGGCTCCTGTGAGGCGAGAAGGCACACTCGAAACCCAGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: MAFTSYFFRFSQQLL*APVRREGTLETQCS Trigger: GGAGCACTGGGTTTCGAGTGTGCCTTCTCGCCTCACAGGAGCCAAGAGCAATTGTTGAGAAAAACGAAAGAAGTAAGAAGTGAATGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGGAGTCAGACTAATCCCTCAGCAACGCTCTTTCGACAATACATGGCAGCAAAAGACAACAAGATTTaGTTTCACGGTCGCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: DGSQTNPSATLFRQYMAAKDNKI*FHGRSS Trigger: GCTGGAGCGACCGTGAAATCAAATCTTGTTGTCTTT...TGCTGCCATGTATTGTCGAAAGAGCGTTGCTGAGGGATTAGTCTGACTCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR GCA 90 bp | TCTATTAGTTTCAGTGACTACAGAAGGAGTACTTGTGTGCTCCAGTTCCTCATCGGGAGACTGCAGCTTTaGTTGAGCAGAGTGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: SISFSDYRRSTCVLQFLIGRLQL*LSRVGH Trigger: ATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCC...GATGAGGAACTGGAGCACACAAGTACTCCTTCTGTAGTCACTGAAACTAATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR CAA 90 bp | AACAGCATGGCATTCACTTCTTACTTCTTTCGTTTTTCTCAACAATaGCTCTTGGCTCCTGTGAGGCGAGAAGGCACACTCGAAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: NSMAFTSYFFRFSQQ*LLAPVRREGTLETQ Trigger: CTGGGTTTCGAGTGTGCCTTCTCGCCTCACAGGAGCCAAGAGCAATTGTTGAGAAAAACGAAAGAAGTAAGAAGTGAATGCCATGCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAGTCAGACTAATCCCTCAGCAACGCTCTTTCGACAATACATGGCAGCAAGAATAAAAGAGGAGTaGGGACTGATATGGGGATTT | + |
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Preference number: 2 (lower is better) Translates to: DGSQTNPSATLFRQYMAARIKEE*GLIWGF Trigger: AAATCCCCATATCAGTCCCCACTCCTCTTTTATTCT...TGCTGCCATGTATTGTCGAAAGAGCGTTGCTGAGGGATTAGTCTGACTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR CCA 90 bp | ACACCCACGTCAGTCCTGCTGAGGCATGCATTCTGCTTTTCAAAGGGCTTTAGCGGACTACATCATTTGTaGGGACTAAATATGTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: TPTSVLLRHAFCFSKGFSGLHHL*GLNMCL Trigger: TAAGCACATATTTAGTCCCCACAAATGATGTAGTCC...GCTAAAGCCCTTTGAAAAGCAGAATGCATGCCTCAGCAGGACTGACGTGGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR GCA 90 bp | GCTAGTAATTACTGTATCTGGAGTGTGCATTTGGGTGACCCTGTAACCAAGGCTTGGGGACTAAATATGTaGTTACAGCTCTTAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ASNYCIWSVHLGDPVTKAWGLNM*LQLLAE Trigger: CTCTGCTAAGAGCTGTAAGCACATATTTAGTCCCCA...AGCCTTGGTTACAGGGTCACCCAAATGCACACTCCAGATACAGTAATTACTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGACCAGGGCTCCTCTTAATGTTCTTCAGCAATGTTTAACACTTGTCTTTTATCGTGGTCCACAGTaGTATGGAGATCCCAGATTG | + |
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Preference number: 2 (lower is better) Translates to: SRTRAPLNVLQQCLTLVFYRGPQ*YGDPRL Trigger: CAATCTGGGATCTCCATACCACTGTGGACCACGATA...AAAGACAAGTGTTAAACATTGCTGAAGAACATTAAGAGGAGCCCTGGTCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGATATATGTAAACCTAGATGATTTTGAAGTCATTAACGTCAGGAACCTTACCTTCCCTGATCCCTaGAAGCAATCTGACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: AEIYVNLDDFEVINVRNLTFPDP*KQSDRK Trigger: TTTTCTGTCAGATTGCTTTCAGGGATCAGGGAAGGT...AAGGTTCCTGACGTTAATGACTTCAAAATCATCTAGGTTTACATATATCTCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCATGTCATACTCATTACAGGTCAATTTTCATTTGCAATCTGAAACACTGAAAACAGAGGCCCTTTaGTCTTGCAAACTTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: IPMSYSLQVNFHLQSETLKTEAL*SCKLSM Trigger: CATAGAAAGTTTGCAAGACCAAAGGGCCTCTGTTTT...CAGTGTTTCAGATTGCAAATGAAAATTGACCTGTAATGAGTATGACATGGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR CAA 90 bp | AAATGTAAGATTCCCATGTCATACTCATTACAGGTCAATTTTCATTaGCAATCTGAAACACTGAGAAGTGCACTGTTAGTAATCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KCKIPMSYSLQVNFH*QSETLRSALLVICR Trigger: TCTGCAGATTACTAACAGTGCACTTCTCAGTGTTTCAGATTGCAAATGAAAATTGACCTGTAATGAGTATGACATGGGAATCTTACATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR GCA 72 bp | TCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTaGTTGAGCAGAGTGGGCCATTTGCAGGTTAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SQLQHGLGRLQL*LSRVGHLQVKL Trigger: CAGCTTAACCTGCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR TCA 72 bp | AGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGCAGGTTAAGCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: SCSTAWGDCSFA*AEWAICRLSCH Trigger: ATGGCAGCTTAACCTGCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR GCA 72 bp | TCAGCACTATCAGGAACCAGATCTTGGCGTCTTCCTTaGTCACTCCCAGTTGCAGCACGGCCTGGGGAGACT | + |
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Preference number: 3 (lower is better) Translates to: SALSGTRSWRLP*SLPVAARPGET Trigger: AGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGCACTATCAGGAACCAGATCTTGGCGTCTTCCTTGCTCACTCCCAGTTGCAGGGGAGACTGCAGCTTaGCTTGAGCAGAGTGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SALSGTRSWRLPCSLPVAGETAA*LEQSGP Trigger: TGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCC...TGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| 3UTR CCA 72 bp | ACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTaGCCGGAATGTGATGGCGAAGGAAGCCAGTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: TWAVSLQCERVR*PECDGEGSQSS Trigger: GGAAGACTGGCTTCCTTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| 3UTR-3UTR CAA 90 bp | TCTATGCCCCAGTACAGGGGAACGTCAGAGCCAAGAAGCAGGAGTGGGAGGGTTCGTTTTTCTCAACAATaGCTCTTGGCTCCTGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: SMPQYRGTSEPRSRSGRVRFSQQ*LLAPVR Trigger: CCTCACAGGAGCCAAGAGCAATTGTTGAGAAAAACG...AACCCTCCCACTCCTGCTTCTTGGCTCTGACGTTCCCCTGTACTGGGGCATAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR TCA 72 bp | ACACTGGAGCAGGAGCCTATGTGTCCTTTCACCAACTaGCTTGTCTCCTCTGGGTTATCGTGGTCCACAGTG | + |
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Preference number: 3 (lower is better) Translates to: TLEQEPMCPFTN*LVSSGLSWSTV Trigger: CACTGTGGACCACGATAACCCAGAGGAGACAAGTCAGTTGGTGAAAGGACACATAGGCTCCTGCTCCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR GCA 72 bp | GCTCCTGTGAGGCGAGAAGGCACACTCGAAACCCAGTaGTCCTATTGTGATCTCCCATCACTGCTATTTGTC | + |
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Preference number: 3 (lower is better) Translates to: APVRREGTLETQ*SYCDLPSLLFV Trigger: GACAAATAGCAGTGATGGGAGATCACAATAGGAGCACTGGGTTTCGAGTGTGCCTTCTCGCCTCACAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR-3UTR CAA 90 bp | CATACTCTGCTAGGGCACCATCATACCTTCTGCCTACAGACCTTCCCTGATCCCAGAGGCCCTTTGGTCTaGCAAACTTTCTATGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: HTLLGHHHTFCLQTFPDPRGPLV*QTFYAP Trigger: TGGGGCATAGAAAGTTTGCAAGACCAAAGGGCCTCT...GGGATCAGGGAAGGTCTGTAGGCAGAAGGTATGATGGTGCCCTAGCAGAGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR TCA 72 bp | TCTTTTCCTCTCTCAGCAGTAGGAAGCCAGACGAACTaGGGACACTGGAGCAGGAGCCTATGTGTCCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: SFPLSAVGSQTN*GHWSRSLCVLS Trigger: TGAAAGGACACATAGGCTCCTGCTCCAGTGTCCTCAGTTCGTCTGGCTTCCTACTGCTGAGAGAGGAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR TCA 72 bp | AAGAACGTGCACAGGGAGTGGAATAGGAATCAGAGTTaGCCTACGACTGCAGAGCAGGTATGTAGGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: KNVHREWNRNQS*PTTAEQVCRAL Trigger: GAGTGCCCTACATACCTGCTCTGCAGTCGTAGGTCAACTCTGATTCCTATTCCACTCCCTGTGCACGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR TCA 72 bp | TCTTTCGTTTTTCTCAACAATTGCTCTTGGCTCCTGTaGGGCGAGAAGGCACACTCGAAACCCAGTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SFVFLNNCSWLL*GEKAHSKPSAP Trigger: AGGAGCACTGGGTTTCGAGTGTGCCTTCTCGCCTCACAGGAGCCAAGAGCAATTGTTGAGAAAAACGAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
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| 3UTR CCA 72 bp | AGACTAATCCCTCAGCAACGCTCTTTCGACAATACATaGCAGCAACATGCAGCCAATCCTGTAGCTAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: RLIPQQRSFDNT*QQHAANPVASP Trigger: TGGGCTAGCTACAGGATTGGCTGCATGTTGCTGCCATGTATTGTCGAAAGAGCGTTGCTGAGGGATTAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAAAATGTAATGCCGTGTCTCCTAGAGGTGGTTCAAGGACCAGGGCTCCTCTTTCACCAACTGACTaGTCTCCTCTGGGTTATCGT | + |
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Preference number: 3 (lower is better) Translates to: TEKCNAVSPRGGSRTRAPLSPTD*SPLGYR Trigger: ACGATAACCCAGAGGAGACAAGTCAGTTGGTGAAAG...AGGAGCCCTGGTCCTTGAACCACCTCTAGGAGACACGGCATTACATTTTTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| 3UTR GCA 72 bp | TCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTaGGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSRKYTWAVSLQ*ERVRWPECDGE Trigger: TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| 3UTR CCA 72 bp | TCTTCTAAATATTCAGCACTATCAGGAACCAGATCTTaGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SSKYSALSGTRS*RLPCSLPVAAR Trigger: CCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTGCTGAATATTTAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTATTAGTTTCAGTGACTACAGAAGGAGTACTTGTGTGCTCCAGTTCCTCATCAGACTGCAGCTTTGCTaGAGCAGAGTGGGCCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: SISFSDYRRSTCVLQFLIRLQLC*SRVGHL Trigger: CAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCT...GATGAGGAACTGGAGCACACAAGTACTCCTTCTGTAGTCACTGAAACTAATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| 3UTR TCA 72 bp | TGTAGTTACTCTTCCAGTAAAACAGCATGTGCTGTCTaGAATTGCTATGGGATCCTGGGAGCTCATTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSYSSSKTACAV*NCYGILGAHCK Trigger: CTTGCAATGAGCTCCCAGGATCCCATAGCAATTTCAGACAGCACATGCTGTTTTACTGGAAGAGTAACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| 3UTR CCA 72 bp | TTTTCTCATACACCCCAAGCTAGTAATTACTGTATCTaGAGTGTGCATTTGGGTGACCCTGTAACCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FSHTPQASNYCI*SVHLGDPVTKA Trigger: AGCCTTGGTTACAGGGTCACCCAAATGCACACTCCAGATACAGTAATTACTAGCTTGGGGTGTATGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGAGTGGAATAGGAATCAGAGTTGACCTACGACTGCAGAGCAGGTATGTAATGGCTCAAACTATTTaGCAAAGAGCAGAAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGSGIGIRVDLRLQSRYVMAQTI*QRAEDK Trigger: TTTGTCTTCTGCTCTTTGCAAAATAGTTTGAGCCAT...TACATACCTGCTCTGCAGTCGTAGGTCAACTCTGATTCCTATTCCACTCCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| 3UTR TCA 72 bp | ATCCATCTTCACCAAACACTTTACAGACATTTGTACTaGGAGTACAATTCCAGAACCACAGAGCTTACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IHLHQTLYRHLY*EYNSRTTELTN Trigger: GTTTGTAAGCTCTGTGGTTCTGGAATTGTACTCTCAGTACAAATGTCTGTAAAGTGTTTGGTGAAGATGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| 3UTR TCA 72 bp | AGCATAATCTTATCCGTTTGCAGCAAATACACAATCTaGAGCATTCAACCTCCCATAAAGGTATATCGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SIILSVCSKYTI*SIQPPIKVYRL Trigger: AAGGCGATATACCTTTATGGGAGGTTGAATGCTTCAGATTGTGTATTTGCTGCAAACGGATAAGATTATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| 3UTR TCA 72 bp | CAGAAATCATTTGCTAAATTAGCAAACAGTAGGTGTTaGGCTTCCACACACCACAGAGACAAAATTACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QKSFAKLANSRC*ASTHHRDKITG Trigger: ACCAGTAATTTTGTCTCTGTGGTGTGTGGAAGCTCAACACCTACTGTTTGCTAATTTAGCAAATGATTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| 3UTR GCA 72 bp | TCTGCCTATAAGTTTCTATTGCCTATCACAGAGTTTTaGTCACCCTTGTGCCTTAAGCATTTTGAGAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SAYKFLLPITEF*SPLCLKHFESN Trigger: ATTACTCTCAAAATGCTTAAGGCACAAGGGTGAGCAAAACTCTGTGATAGGCAATAGAAACTTATAGGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| 3UTR TCA 72 bp | AAATTGCTATGGGATCCTGGGAGCTCATTGCAAGAATaGGTTCTAGTTGATCATCTTTTTCAATATCATATA | + |
|
Preference number: 3 (lower is better) Translates to: KLLWDPGSSLQE*VLVDHLFQYHI Trigger: TATATGATATTGAAAAAGATGATCAACTAGAACTCATTCTTGCAATGAGCTCCCAGGATCCCATAGCAATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAAGCACCGCTTTCTTCATaGTGGGGCTCTCGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WAVSLQCERVRWPECDGEAPLSS*WGSRAG Trigger: TCCTGCCCGAGAGCCCCAGCATGAAGAAAGCGGTGC...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCTTGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTGCATCTCTAGTTGCTGCTaGAGTGCTGCTGGCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: VFLAHSQLQHGLGRLQLCISSCC*SAAGFT Trigger: CGTGAAGCCAGCAGCACTGCAGCAGCAACTAGAGAT...GCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTGAGCAGAGTGCTGCTGCAGTGCTGCTaGCTTCACGTTGTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: HSQLQHGLGRLQLCLSRVLLQCC*LHVVIH Trigger: GTGTATCACAACGTGAAGCCAGCAGCACTGCAGCAG...CACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| 3UTR CAA 72 bp | GAACCAGATCTTGGCGTCTTCCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPDLGVFLAHSQ*QHGLGRLQLCL Trigger: CAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR TCA 90 bp | CACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTGAGCAGAGTGTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSQLQHGLGRLQLCLSRVFEESG*EVVGIS Trigger: GGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAA...CACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR GCA 90 bp | CCAGATCTTGGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGATTGCTGCTGCAGTGCTaGTGGCTTCACGTTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PDLGVFLAHSQLQHGLGRLLLQC*WLHVVI Trigger: TATCACAACGTGAAGCCAGCAGCACTGCAGCAGCAA...TCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| 3UTR CAA 72 bp | TTCAGCACTATCAGGAACCAGATCTTGGCGTCTTCCTaGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTIRNQILASS*LTPSCSTAWGD Trigger: GTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAAGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WAVSLQCERVRWPECDGEDCSFA*AEWAIC Trigger: GCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTC...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCACTATCAGGAACCAGATCTTGGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACCGCTTTCTTCATaGTGGGGCTCTCGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SALSGTRSWRLPCSLPVAAPLSS*WGSRAG Trigger: TCCTGCCCGAGAGCCCCAGCATGAAGAAAGCGGTGC...TGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGATAGTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAAGGGAGACTGCAGCTTTaGTTGAGCAGAGTGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WAVSLQCERVRWPECDGEGRLQL*LSRVGH Trigger: ATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCC...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAATTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WAVSLQCERVRWPECDGEFEESG*EVVGIS Trigger: GGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAA...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAACTTCCTCTTCTTCACTaGAACTGCTCTCGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WAVSLQCERVRWPECDGELPLLH*NCSRPS Trigger: TGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGAAG...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049388.9 ENSMUST00000234280.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTGCAAACTTTCTATGCCCCAGTACAGGGGAACGTCAGAGCCAAGAAGCGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSCKLSMPQYRGTSEPRSDCSFA*AEWAIC Trigger: GCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTC...GCTTCTTGGCTCTGACGTTCCCCTGTACTGGGGCATAGAAAGTTTGCAAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAATTGCTGCTGCAGTGCTaGTGGCTTCACGTTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WAVSLQCERVRWPECDGELLLQC*WLHVVI Trigger: TATCACAACGTGAAGCCAGCAGCACTGCAGCAGCAA...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGAACCAGATCTTGGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACGGCCTGTCTCCAGAACCAGGTaGAGTTCTTGTTTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGTRSWRLPCSLPVAARPVSRTR*SSCFSR Trigger: TCTAGAGAAACAAGAACTTCACCTGGTTCTGGAGAC...AGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGGTTCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGTAATTACTGTATCTGGAGTGTGCATTTGGGTGACCCTGTAACCAAGGCTGCACCGCTTTCTTCATaGTGGGGCTCTCGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASNYCIWSVHLGDPVTKAAPLSS*WGSRAG Trigger: TCCTGCCCGAGAGCCCCAGCATGAAGAAAGCGGTGC...AGCCTTGGTTACAGGGTCACCCAAATGCACACTCCAGATACAGTAATTACTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTGCAAACTTTCTATGCCCCAGTACAGGGGAACGTCAGAGCCAAGAAGCCTTCCTCTTCTTCACTaGAACTGCTCTCGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSCKLSMPQYRGTSEPRSLPLLH*NCSRPS Trigger: TGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGAAG...GCTTCTTGGCTCTGACGTTCCCCTGTACTGGGGCATAGAAAGTTTGCAAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR GCA 90 bp | ATAGTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGGCACCGCTTTCTTCATaGTGGGGCTCTCGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVSPNPLENILGQSLFSAAPLSS*WGSRAG Trigger: TCCTGCCCGAGAGCCCCAGCATGAAGAAAGCGGTGC...CGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGCACCGCTTTCTTCATaGTGGGGCTCTCGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPNPLENILGQSLFSAKAPLSS*WGSRAG Trigger: TCCTGCCCGAGAGCCCCAGCATGAAGAAAGCGGTGC...TTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAGTGGAATAGGAATCAGAGTTGACCTACGACTGCAGAGCAGGTATGTAGGGAGACTGCAGCTTTaGTTGAGCAGAGTGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSGIGIRVDLRLQSRYVGRLQL*LSRVGH Trigger: ATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCC...TACATACCTGCTCTGCAGTCGTAGGTCAACTCTGATTCCTATTCCACTCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR GCA 90 bp | GGTGCTTCCTCCTTCCAAGAGGCAGGCGTTCTTCTAAATATTCAGCACTATCAGTGCCTTAGCCGTAGCTaGTGTGCAAAGCCAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GASSFQEAGVLLNIQHYQCLSRS*CAKPVS Trigger: GCTCACTGGCTTTGCACAGCAGCTACGGCTAAGGCA...CTGATAGTGCTGAATATTTAGAAGAACGCCTGCCTCTTGGAAGGAGGAAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTGCAAACTTTCTATGCCCCAGTACAGGGGAACGTCAGAGCCAAGAAGCAGCCAGCTGCGCTTGTATaGTCTCCAGCTTGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLQTFYAPVQGNVRAKKQPAALV*SPACCR Trigger: TCTACAACAAGCTGGAGACCATACAAGCGCAGCTGG...CTGCTTCTTGGCTCTGACGTTCCCCTGTACTGGGGCATAGAAAGTTTGCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR TCA 90 bp | ACAGAAAAATGTAATGCCGTGTCTCCTAGAGGTGGTTCAAGGACCAGGGCTCCTTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEKCNAVSPRGGSRTRAPFEESG*EVVGIS Trigger: GGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAA...AGGAGCCCTGGTCCTTGAACCACCTCTAGGAGACACGGCATTACATTTTTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAAAAGAACACTGCAGGACAAATGCCAAAACATTTGACGGCCTGCGGCTGCGCTGGCTTCACGTTGTaGTACACTGCCTGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQKNTAGQMPKHLTACGCAGFTL*YTACSK Trigger: TTTGGAACAGGCAGTGTATCACAACGTGAAGCCAGC...GCAGCCGCAGGCCGTCAAATGTTTTGGCATTTGTCCTGCAGTGTTCTTTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR TCA 90 bp | GCTAGTAATTACTGTATCTGGAGTGTGCATTTGGGTGACCCTGTAACCAAGGCTGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASNYCIWSVHLGDPVTKADCSFA*AEWAIC Trigger: GCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTC...AGCCTTGGTTACAGGGTCACCCAAATGCACACTCCAGATACAGTAATTACTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCTTCCTCCTTCCAAGAGGCAGGCGTTCTTCTAAATATTCAGCACTATCAGCTTCCTCTTCTTCACTaGAACTGCTCTCGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GASSFQEAGVLLNIQHYQLPLLH*NCSRPS Trigger: TGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGAAG...CTGATAGTGCTGAATATTTAGAAGAACGCCTGCCTCTTGGAAGGAGGAAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR TCA 90 bp | TCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNPLENILGQSLFSAKEDCSFA*AEWAIC Trigger: GCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTC...CTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR GCA 90 bp | TCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGGGGAGACTGCAGCTTTaGTTGAGCAGAGTGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPNPLENILGQSLFSAKEGRLQL*LSRVGH Trigger: ATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCC...CTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR TCA 90 bp | GTAAAACAGCATGTGCTGTCTGAAATTGCTATGGGATCCTGGGAGCTCATTGCAGCTGGCTTCACGTTGTaGTACACTGCCTGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKQHVLSEIAMGSWELIAAGFTL*YTACSK Trigger: TTTGGAACAGGCAGTGTATCACAACGTGAAGCCAGC...TGCAATGAGCTCCCAGGATCCCATAGCAATTTCAGACAGCACATGCTGTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR GCA 90 bp | TCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGATCTCTAGTTGCTGCTaGAGTGCTGCTGGCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: SPNPLENILGQSLFSAKEISSCC*SAAGFT Trigger: CGTGAAGCCAGCAGCACTGCAGCAGCAACTAGAGAT...CTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCTTACAAACAGCTTAACAGCAGATCAGCACTCAGAAAGGGCACAGTTAACATCTCTAGTTGCTGCTaGAGTGCTGCTGGCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RAYKQLNSRSALRKGTVNISSCC*SAAGFT Trigger: CGTGAAGCCAGCAGCACTGCAGCAGCAACTAGAGAT...GTTAACTGTGCCCTTTCTGAGTGCTGATCTGCTGTTAAGCTGTTTGTAAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAGTACAATTCCAGAACCACAGAGCTTACAAACAGAGCTTACAAACAGCGGGAGACTGCAGCTTTaGTTGAGCAGAGTGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TESTIPEPQSLQTELTNSGRLQL*LSRVGH Trigger: ATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCC...GCTGTTTGTAAGCTCTGTTTGTAAGCTCTGTGGTTCTGGAATTGTACTCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGCTGCTGCAGTGCTGCTaGCTTCACGTTGTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: IVSPNPLENILGQSLFSALLQCC*LHVVIH Trigger: GTGTATCACAACGTGAAGCCAGCAGCACTGCAGCAG...CGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR TCA 90 bp | GTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAATTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSPNPLENILGQSLFSAKFEESG*EVVGIS Trigger: GGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAA...TTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVSPNPLENILGQSLFSAFEESG*EVVGIS Trigger: GGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAA...CGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGAACCACAGAGCTTACAAACAGAGCTTACAAACAGCTTAACAGCAGATGACTGCAGCTTTGCTTaGGCAGAGTGGGCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPEPQSLQTELTNSLTADDCSFA*AEWAIC Trigger: GCAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTC...ATCTGCTGTTAAGCTGTTTGTAAGCTCTGTTTGTAAGCTCTGTGGTTCTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGTACAATTCCAGAACCACAGAGCTTACAAACAGAGCTTACAAACAGCTGCTGGCTTCACGTTGTaGTACACTGCCTGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVQFQNHRAYKQSLQTAAGFTL*YTACSK Trigger: TTTGGAACAGGCAGTGTATCACAACGTGAAGCCAGC...AGCTGTTTGTAAGCTCTGTTTGTAAGCTCTGTGGTTCTGGAATTGTACTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTAACAGCAGATCAGCACTCAGAAAGGGCACAGTTAACTGGAATTCACTTTTTGCTGCTGCAGTGCTaGTGGCTTCACGTTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLTADQHSERAQLTGIHFLLLQC*WLHVVI Trigger: TATCACAACGTGAAGCCAGCAGCACTGCAGCAGCAA...AAAGTGAATTCCAGTTAACTGTGCCCTTTCTGAGTGCTGATCTGCTGTTAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCCTCTTAATGTTCTTCAGCAATGTTTAACACTTGTCTTTTCCTCTCTCATCTCTAGTTGCTGCTaGAGTGCTGCTGGCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RAPLNVLQQCLTLVFSSLISSCC*SAAGFT Trigger: CGTGAAGCCAGCAGCACTGCAGCAGCAACTAGAGAT...GAGAGAGGAAAAGACAAGTGTTAAACATTGCTGAAGAACATTAAGAGGAGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR GCA 90 bp | TCTATTAGTTTCAGTGACTACAGAAGGAGTACTTGTGTGCTCCAGTTCCTCATCCTGGTAACGGAATGCTaGATCCCGCACACTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SISFSDYRRSTCVLQFLILVTEC*IPHTVR Trigger: TCTTACAGTGTGCGGGATGCAGCATTCCGTTACCAG...GATGAGGAACTGGAGCACACAAGTACTCCTTCTGTAGTCACTGAAACTAATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR CCA 90 bp | AATTCCAGAACCACAGAGCTTACAAACAGAGCTTACAAACAGCTTAACAGCAGACTGCTGCAGTGCTGCTaGCTTCACGTTGTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: NSRTTELTNRAYKQLNSRLLQCC*LHVVIH Trigger: GTGTATCACAACGTGAAGCCAGCAGCACTGCAGCAG...TCTGCTGTTAAGCTGTTTGTAAGCTCTGTTTGTAAGCTCTGTGGTTCTGGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCTTACAAACAGCTTAACAGCAGATCAGCACTCAGAAAGGGCACAGTTAACAGGTCACATGCACTaGCAGCTGTTATGTTCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TELTNSLTADQHSERAQLTGHMH*QLLCSL Trigger: TAGCGAACATAACAGCTGCCAGTGCATGTGACCTGT...TAACTGTGCCCTTTCTGAGTGCTGATCTGCTGTTAAGCTGTTTGTAAGCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCCTCTTAATGTTCTTCAGCAATGTTTAACACTTGTCTTTTCCTCTCTCCTTCCTCTTCTTCACTaGAACTGCTCTCGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPLNVLQQCLTLVFSSLLPLLH*NCSRPS Trigger: TGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGAAG...GAGAGAGGAAAAGACAAGTGTTAAACATTGCTGAAGAACATTAAGAGGAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGTCTCCAGAACCAGGTaGAGTTCTTGTTTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPNPLENILGQSLFSAKVSRTR*SSCFSR Trigger: TCTAGAGAAACAAGAACTTCACCTGGTTCTGGAGAC...TTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049388.9 ENSMUST00000234280.2 |
||
| CDS-3UTR TCA 90 bp | AGTACAATTCCAGAACCACAGAGCTTACAAACAGAGCTTACAAACAGCTTAACACTTCCTCTTCTTCACTaGAACTGCTCTCGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STIPEPQSLQTELTNSLTLPLLH*NCSRPS Trigger: TGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGAAG...TGTTAAGCTGTTTGTAAGCTCTGTTTGTAAGCTCTGTGGTTCTGGAATTGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCACCAAACACTTTACAGACATTTGTACTGAGAGTACAATTCCAGAACCACCGGACACAGGTCACATaGACTGGCAGCTGTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPNTLQTFVLRVQFQNHRTQVT*TGSCYV Trigger: AACATAACAGCTGCCAGTGCATGTGACCTGTGTCCG...GTGGTTCTGGAATTGTACTCTCAGTACAAATGTCTGTAAAGTGTTTGGTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAACACTTTACAGACATTTGTACTGAGAGTACAATTCCAGAACCACAGAGCGTCTCCAGAACCAGGTaGAGTTCTTGTTTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKHFTDICTESTIPEPQSVSRTR*SSCFSR Trigger: TCTAGAGAAACAAGAACTTCACCTGGTTCTGGAGAC...GCTCTGTGGTTCTGGAATTGTACTCTCAGTACAAATGTCTGTAAAGTGTTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR CCA 90 bp | GATATGGGGATTTTGTTAATGCTCCACTGTGTAAGTAATGATAAGAATCTCCTACTGCTGCAGTGCTGCTaGCTTCACGTTGTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: DMGILLMLHCVSNDKNLLLLQCC*LHVVIH Trigger: GTGTATCACAACGTGAAGCCAGCAGCACTGCAGCAG...TAGGAGATTCTTATCATTACTTACACAGTGGAGCATTAACAAAATCCCCATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR TCA 90 bp | GATATGGGGATTTTGTTAATGCTCCACTGTGTAAGTAATGATAAGAATCTCCTAGCTGGCTTCACGTTGTaGTACACTGCCTGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DMGILLMLHCVSNDKNLLAGFTL*YTACSK Trigger: TTTGGAACAGGCAGTGTATCACAACGTGAAGCCAGC...TAGGAGATTCTTATCATTACTTACACAGTGGAGCATTAACAAAATCCCCATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| CDS-3UTR GCA 90 bp | ACTGATATGGGGATTTTGTTAATGCTCCACTGTGTAAGTAATGATAAGAATCTCTTGCTGCTGCAGTGCTaGTGGCTTCACGTTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TDMGILLMLHCVSNDKNLLLLQC*WLHVVI Trigger: TATCACAACGTGAAGCCAGCAGCACTGCAGCAGCAA...GAGATTCTTATCATTACTTACACAGTGGAGCATTAACAAAATCCCCATATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGATATATGTAAACCTAGATGATTTTGAAGTCATTAACGTCAGGAACCTTGTCTCCAGAACCAGGTaGAGTTCTTGTTTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEIYVNLDDFEVINVRNLVSRTR*SSCFSR Trigger: TCTAGAGAAACAAGAACTTCACCTGGTTCTGGAGAC...AAGGTTCCTGACGTTAATGACTTCAAAATCATCTAGGTTTACATATATCTCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR TCA 90 bp | ACTGATATGGGGATTTTGTTAATGCTCCACTGTGTAAGTAATGATAAGAATCTCGTCTCCAGAACCAGGTaGAGTTCTTGTTTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDMGILLMLHCVSNDKNLVSRTR*SSCFSR Trigger: TCTAGAGAAACAAGAACTTCACCTGGTTCTGGAGAC...GAGATTCTTATCATTACTTACACAGTGGAGCATTAACAAAATCCCCATATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| 3UTR CAA 72 bp | ATTCCCATGTCATACTCATTACAGGTCAATTTTCATTaGCAATCTGAAACACTGAGAAGTGCACTGTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPMSYSLQVNFH*QSETLRSALLV Trigger: TACTAACAGTGCACTTCTCAGTGTTTCAGATTGCAAATGAAAATTGACCTGTAATGAGTATGACATGGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR CAA 90 bp | CCAGATCTTGGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGAATCTCCCCGTGTCTATaGCATTTATCAGCGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: PDLGVFLAHSQLQHGLGRISPCL*HLSAAP Trigger: CGGTGCCGCTGATAAATGCAATAGACACGGGGAGAT...TCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS-3UTR CAA 90 bp | TATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YTWAVSLQCERVRWPECDLAHSQ*QHGLGR Trigger: TCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAG...ATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCAAGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS GCA 90 bp | TTGAAGAATCCGGCTGAGAAGTCGTGGGAATCTCCCCGTGTCTATTaGATTTATCAGCGGCACCGCTTTCTTCATGCTGGGGCTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKNPAEKSWESPRVY*IYQRHRFLHAGALG Trigger: CCCGAGAGCCCCAGCATGAAGAAAGCGGTGCCGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234701.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAAATCTCCCCGTGTCTATaGCATTTATCAGCGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: WAVSLQCERVRWPECDGEISPCL*HLSAAP Trigger: CGGTGCCGCTGATAAATGCAATAGACACGGGGAGAT...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | TATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGGGAGACTGCAGCTTaGCTTGAGCAGAGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YTWAVSLQCERVRWPECDGETAA*LEQSGP Trigger: TGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCC...ATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCAAGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGAGTGGAATAGGAATCAGAGTTGACCTACGACTGCAGAGCAGGTATGTACTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGSGIGIRVDLRLQSRYVLAHSQ*QHGLGR Trigger: TCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAG...TACATACCTGCTCTGCAGTCGTAGGTCAACTCTGATTCCTATTCCACTCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
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| CDS CCA 90 bp | CTCGGCCTTCAGGTGGAGCTTTTGAAGAATCCGGCTGAGAAGTCGTaGGAATCTCCCCGTGTCTATTGCATTTATCAGCGGCACCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGLQVELLKNPAEKS*ESPRVYCIYQRHRF Trigger: AAAGCGGTGCCGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS-3UTR CAA 90 bp | CTTGGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGACTGCAGCCAAAACAAATGATATaGTCTCCAGAACCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGVFLAHSQLQHGLGRLQPKQMI*SPEPGE Trigger: TTCACCTGGTTCTGGAGACAATATCATTTGTTTTGG...CTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS TCA 90 bp | GCCGACCAAGCACTGGCAAAGGCTTCCGCTTTGTCTTTCCTAAGATaGATCATCTCTAGTTGCTGCTGCAGTGCTGCTGGCTTCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ADQALAKASALSFLR*IISSCCCSAAGFTL Trigger: CAACGTGAAGCCAGCAGCACTGCAGCAGCAACTAGAGATGATTCATCTTAGGAAAGACAAAGCGGAAGCCTTTGCCAGTGCTTGGTCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234701.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS GCA 90 bp | CGGTCCCATTTCAAAACACCAGCTAGTCAGCTGGTAACGGAATGCTaGATCCCGCACACTGTAAGAATTGTAGCAGTGCTTGTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSHFKTPASQLVTEC*IPHTVRIVAVLVRA Trigger: GGCCCTCACAAGCACTGCTACAATTCTTACAGTGTGCGGGATGCAGCATTCCGTTACCAGCTGACTAGCTGGTGTTTTGAAATGGGACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
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| CDS CCA 90 bp | CACTGCCTTCAGGTGGAGCTTTTGAAGAATCCGGCTGAGAAGTCGTaGGAATCTCCCCGTGTCTATTGCATTTATCAGCGGCACCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HCLQVELLKNPAEKS*ESPRVYCIYQRHRF Trigger: AAAGCGGTGCCGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234701.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGCAAACTTTCTATGCCCCAGTACAGGGGAACGTCAGAGCCAAGAAGCAGAGACTGCAGCTTTGCTaGAGCAGAGTGGGCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLQTFYAPVQGNVRAKKQRLQLC*SRVGHL Trigger: CAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCT...CTGCTTCTTGGCTCTGACGTTCCCCTGTACTGGGGCATAGAAAGTTTGCAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR CAA 90 bp | GCTAGTAATTACTGTATCTGGAGTGTGCATTTGGGTGACCCTGTAACCAAGGCTGGGGAGACTGCAGCTTaGCTTGAGCAGAGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASNYCIWSVHLGDPVTKAGETAA*LEQSGP Trigger: TGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCC...AGCCTTGGTTACAGGGTCACCCAAATGCACACTCCAGATACAGTAATTACTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR CAA 90 bp | ATAGTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IVSPNPLENILGQSLFSALAHSQ*QHGLGR Trigger: TCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAG...CGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | GTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAACTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSPNPLENILGQSLFSAKLAHSQ*QHGLGR Trigger: TCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAG...TTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | GCAAAAGAACACTGCAGGACAAATGCCAAAACATTTGACGGCCTGCGGCTGCTTGGAGTCCAGCTGCGCTaGTATGGTCTCCAGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AKEHCRTNAKTFDGLRLLGVQLR*YGLQLV Trigger: AACAAGCTGGAGACCATACAAGCGCAGCTGGACTCC...AAGCAGCCGCAGGCCGTCAAATGTTTTGGCATTTGTCCTGCAGTGTTCTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS TCA 90 bp | TCCTCTTCTTCACTGAAACTGCTCTCGGCCTTCAGGTGGAGCTTTTaGAGAATCCGGCTGAGAAGTCGTGGGAATCTCCCCGTGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLKLLSAFRWSF*RIRLRSRGNLPVSI Trigger: AATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS TCA 90 bp | AGGTTAAGCTGCCATCCCACTGTCTCTAGCTTCAGGTGGAGCTTTTaGAGAATCCGGCTGAGAAGTCGTGGGAATCTCCCCGTGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: RLSCHPTVSSFRWSF*RIRLRSRGNLPVSI Trigger: AATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGCTAGAGACAGTGGGATGGCAGCTTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234085.2 |
||
| CDS CCA 90 bp | AACTACGTTTTTGAGAGTCAGTGTCTGTTATCCAAAGAAGTCTCTTaGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACGGCCTGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NYVFESQCLLSKEVS*RLPCSLPVAARPGE Trigger: CTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAGACTTCTTTGGATAACAGACACTGACTCTCAAAAACGTAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR CAA 90 bp | GATGGGAGTCAGACTAATCCCTCAGCAACGCTCTTTCGACAATACATGGCAGCAATCTCCCCGTGTCTATaGCATTTATCAGCGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: DGSQTNPSATLFRQYMAAISPCL*HLSAAP Trigger: CGGTGCCGCTGATAAATGCAATAGACACGGGGAGAT...TGCTGCCATGTATTGTCGAAAGAGCGTTGCTGAGGGATTAGTCTGACTCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR CAA 90 bp | TATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATAGACTGCAGCTTTGCTaGAGCAGAGTGGGCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: YTWAVSLQCERVRWPECDRLQLC*SRVGHL Trigger: CAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCT...ATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCAAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR CAA 90 bp | TCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGGGGGAGACTGCAGCTTaGCTTGAGCAGAGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPNPLENILGQSLFSAKEGETAA*LEQSGP Trigger: TGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCC...CTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR CAA 90 bp | GTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGGGGAGACTGCAGCTTaGCTTGAGCAGAGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTESSRKYTWAVSLQCERGETAA*LEQSGP Trigger: TGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCC...TCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAGTACAATTCCAGAACCACAGAGCTTACAAACAGAGCTTACAAACAGCCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TESTIPEPQSLQTELTNSLAHSQ*QHGLGR Trigger: TCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAG...GCTGTTTGTAAGCTCTGTTTGTAAGCTCTGTGGTTCTGGAATTGTACTCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS TCA 90 bp | CGTTGTGATACACTGCCTTCAGGTGGAGCTTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCCCCGTGTCTATTGCATTTATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RCDTLPSGGAFEESG*EVVGISPCLLHLSA Trigger: CGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCAGTGTATCACAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234701.2 |
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| CDS TCA 90 bp | ATCCCACTGTCTCTAGCTTCAGGTGGAGCTTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCCCCGTGTCTATTGCATTTATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: IPLSLASGGAFEESG*EVVGISPCLLHLSA Trigger: CGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGCTAGAGACAGTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234085.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCTCTTGGCTCCTGTGAGGCGAGAAGGCACACTCGAAACCCAGTGCTCCTACCAAAACAAATGATATaGTCTCCAGAACCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IALGSCEARRHTRNPVLLPKQMI*SPEPGE Trigger: TTCACCTGGTTCTGGAGACAATATCATTTGTTTTGG...TAGGAGCACTGGGTTTCGAGTGTGCCTTCTCGCCTCACAGGAGCCAAGAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049388.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCAGTCTCTCTTCAGTGCGAAAGAGTGAGGTGGCCGGAATGTGATGGCGAACCAAAACAAATGATATaGTCTCCAGAACCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAVSLQCERVRWPECDGEPKQMI*SPEPGE Trigger: TTCACCTGGTTCTGGAGACAATATCATTTGTTTTGG...TTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049388.9 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | TCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGAAAGAGGGAGTCCAGCTGCGCTaGTATGGTCTCCAGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPNPLENILGQSLFSAKEGVQLR*YGLQLV Trigger: AACAAGCTGGAGACCATACAAGCGCAGCTGGACTCC...CTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | ATAGTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGATCTCCCCGTGTCTATaGCATTTATCAGCGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: IVSPNPLENILGQSLFSAISPCL*HLSAAP Trigger: CGGTGCCGCTGATAAATGCAATAGACACGGGGAGAT...CGCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | AATAGTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCGGAGTCCAGCTGCGCTaGTATGGTCTCCAGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSVTESSRKYTWAVSLQCGVQLR*YGLQLV Trigger: AACAAGCTGGAGACCATACAAGCGCAGCTGGACTCC...GCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACACTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS TCA 90 bp | GTATGGTCTCCAGCTTGTTGTAGAAATCGAACAGCTCCTTGTGATTaGATTCCACGAGAACTTTCTCCACGTTCTTGGCGTCTTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VWSPACCRNRTAPCD*IPRELSPRSWRLPC Trigger: GCAAGGAAGACGCCAAGAACGTGGAGAAAGTTCTCGTGGAATTCAATCACAAGGAGCTGTTCGATTTCTACAACAAGCTGGAGACCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 ENSMUST00000234701.2 |
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| CDS-3UTR CAA 90 bp | AATAGTGTCACCGAATCCTCTAGAAAATATACTTGGGCAGTCTCTCTTCAGTGCATCTCCCCGTGTCTATaGCATTTATCAGCGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: NSVTESSRKYTWAVSLQCISPCL*HLSAAP Trigger: CGGTGCCGCTGATAAATGCAATAGACACGGGGAGAT...GCACTGAAGAGAGACTGCCCAAGTATATTTTCTAGAGGATTCGGTGACACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 |
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| CDS-3UTR CAA 90 bp | ATCTTCACCAAACACTTTACAGACATTTGTACTGAGAGTACAATTCCAGAACCAGGGGAGACTGCAGCTTaGCTTGAGCAGAGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IFTKHFTDICTESTIPEPGETAA*LEQSGP Trigger: TGGCCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCC...TGGTTCTGGAATTGTACTCTCAGTACAAATGTCTGTAAAGTGTTTGGTGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAAATGTAATGCCGTGTCTCCTAGAGGTGGTTCAAGGACCAGGGCTCCTGAACAAACTACGTTTTaGAGAGTCAGTGTCTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TEKCNAVSPRGGSRTRAPEQTTF*RVSVCY Trigger: ATAACAGACACTGACTCTCAAAAACGTAGTTTGTTC...AGGAGCCCTGGTCCTTGAACCACCTCTAGGAGACACGGCATTACATTTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR CAA 90 bp | AAACACTTTACAGACATTTGTACTGAGAGTACAATTCCAGAACCACAGAGCTTAAGACTGCAGCTTTGCTaGAGCAGAGTGGGCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDICTESTIPEPQSLRLQLC*SRVGHL Trigger: CAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCT...TAAGCTCTGTGGTTCTGGAATTGTACTCTCAGTACAAATGTCTGTAAAGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCTTACAAACAGCTTAACAGCAGATCAGCACTCAGAAAGGGCACAGTTAACCCAAAACAAATGATATaGTCTCCAGAACCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RAYKQLNSRSALRKGTVNPKQMI*SPEPGE Trigger: TTCACCTGGTTCTGGAGACAATATCATTTGTTTTGG...GTTAACTGTGCCCTTTCTGAGTGCTGATCTGCTGTTAAGCTGTTTGTAAGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS-3UTR CAA 90 bp | ACTGATATGGGGATTTTGTTAATGCTCCACTGTGTAAGTAATGATAAGAATCTCAGACTGCAGCTTTGCTaGAGCAGAGTGGGCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TDMGILLMLHCVSNDKNLRLQLC*SRVGHL Trigger: CAAATGGCCCACTCTGCTCAAGCAAAGCTGCAGTCT...GAGATTCTTATCATTACTTACACAGTGGAGCATTAACAAAATCCCCATATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGGACCAGGGCTCCTCTTAATGTTCTTCAGCAATGTTTAACACTTGTCTTTCCAAAACAAATGATATaGTCTCCAGAACCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRTRAPLNVLQQCLTLVFPKQMI*SPEPGE Trigger: TTCACCTGGTTCTGGAGACAATATCATTTGTTTTGG...AAAGACAAGTGTTAAACATTGCTGAAGAACATTAAGAGGAGCCCTGGTCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS CAA 72 bp | CTCCACGTTCTTGGCGTCTTCCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LHVLGVFLAHSQ*QHGLGRLQLCL Trigger: CAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAACGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 ENSMUST00000234701.2 |
||
| CDS GCA 72 bp | CCACGAGAACTTTCTCCACGTTCTTGGCGTCTTCCTTaGTCACTCCCAGTTGCAGCACGGCCTGGGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PRELSPRSWRLP*SLPVAARPGET Trigger: AGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAACGTGGAGAAAGTTCTCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 ENSMUST00000234701.2 |
||
| CDS CAA 72 bp | TCCACGAGAACTTTCTCCACGTTCTTGGCGTCTTCCTaGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: STRTFSTFLASS*LTPSCSTAWGD Trigger: GTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAACGTGGAGAAAGTTCTCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 ENSMUST00000234701.2 |
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| CDS CAA 90 bp | GAGAACTTTCTCCACGTTCTTGGCGTCTTCCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTGAGCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ENFLHVLGVFLAHSQ*QHGLGRLQLCLSRV Trigger: CACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAACGTGGAGAAAGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 ENSMUST00000234701.2 |
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| CDS CAA 72 bp | AAGAAGTCTCTTGGCGTCTTCCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KKSLGVFLAHSQ*QHGLGRLQLCL Trigger: CAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAGACTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS CAA 72 bp | GCTGTTATGTTCGCTAAGCAGTTCTTGGCGTCTTCCTaGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVMFAKQFLASS*LTPSCSTAWGD Trigger: GTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAACTGCTTAGCGAACATAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS GCA 72 bp | CCGGCTGAGAAGTCGTGGGAATCTCCCCGTGTCTATTaGATTTATCAGCGGCACCGCTTTCTTCATGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAEKSWESPRVY*IYQRHRFLHAG Trigger: CCCAGCATGAAGAAAGCGGTGCCGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234701.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS GCA 72 bp | CTGTTATGTTCGCTAAGCAGTTCTTGGCGTCTTCCTTaGTCACTCCCAGTTGCAGCACGGCCTGGGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LLCSLSSSWRLP*SLPVAARPGET Trigger: AGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAACTGCTTAGCGAACATAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS CAA 72 bp | GTGTCTGTTATCCAAAGAAGTCTCTTGGCGTCTTCCTaGCTCACTCCCAGTTGCAGCACGGCCTGGGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VSVIQRSLLASS*LTPSCSTAWGD Trigger: GTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAGACTTCTTTGGATAACAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS CAA 90 bp | TGTTATCCAAAGAAGTCTCTTGGCGTCTTCCTTGCTCACTCCCAGTaGCAGCACGGCCTGGGGAGACTGCAGCTTTGCTTGAGCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CYPKKSLGVFLAHSQ*QHGLGRLQLCLSRV Trigger: CACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAGACTTCTTTGGATAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS TCA 72 bp | TCACTGAAACTGCTCTCGGCCTTCAGGTGGAGCTTTTaGAGAATCCGGCTGAGAAGTCGTGGGAATCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLKLLSAFRWSF*RIRLRSRGNLP Trigger: GGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCCGAGAGCAGTTTCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS TCA 72 bp | TGCAGGTTAAGCTGCCATCCCACTGTCTCTAGCTTGTaGGGGCCCAGGATTCTCTGGCGGAACTTCTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: CRLSCHPTVSSL*GPRILWRNFST Trigger: AGTTGAGAAGTTCCGCCAGAGAATCCTGGGCCCTCACAAGCTAGAGACAGTGGGATGGCAGCTTAACCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234701.2 ENSMUST00000234961.2 |
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| CDS GCA 72 bp | TGTCTGTTATCCAAAGAAGTCTCTTGGCGTCTTCCTTaGTCACTCCCAGTTGCAGCACGGCCTGGGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: CLLSKEVSWRLP*SLPVAARPGET Trigger: AGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAGACTTCTTTGGATAACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234124.2 |
||
| CDS CAA 72 bp | CATGCACTGGCAGCTGTTATGTTCGCTAAGCAGTTCTaGGCGTCTTCCTTGCTCACTCCCAGTTGCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: HALAAVMFAKQF*ASSLLTPSCST Trigger: CGTGCTGCAACTGGGAGTGAGCAAGGAAGACGCCAAGAACTGCTTAGCGAACATAACAGCTGCCAGTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234961.2 |
||
| CDS TCA 72 bp | TCTCGGCCTTCAGGTGGAGCTTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCCCCGTGTCTATTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRPSGGAFEESG*EVVGISPCLLH Trigger: ATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS CAA 72 bp | TTCACTGAAACTGCTCTCGGCCTTCAGGTGGAGCTTTaGAAGAATCCGGCTGAGAAGTCGTGGGAATCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FTETALGLQVEL*KNPAEKSWESP Trigger: GGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCCGAGAGCAGTTTCAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS CAA 90 bp | TGCTGCTGGCTTCACGTTGTGATACACTGCCTTCAGGTGGAGCTTTaGAAGAATCCGGCTGAGAAGTCGTGGGAATCTCCCCGTGTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: CCWLHVVIHCLQVEL*KNPAEKSWESPRVY Trigger: ATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCAGTGTATCACAACGTGAAGCCAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234701.2 |
||
| CDS CAA 90 bp | TTCCTCTTCTTCACTGAAACTGCTCTCGGCCTTCAGGTGGAGCTTTaGAAGAATCCGGCTGAGAAGTCGTGGGAATCTCCCCGTGTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: FLFFTETALGLQVEL*KNPAEKSWESPRVY Trigger: ATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS TCA 72 bp | GCACTGGCAAAGGCTTCCGCTTTGTCTTTCCTAAGATaGATCATCTCTAGTTGCTGCTGCAGTGCTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALAKASALSFLR*IISSCCCSAAG Trigger: GCCAGCAGCACTGCAGCAGCAACTAGAGATGATTCATCTTAGGAAAGACAAAGCGGAAGCCTTTGCCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234701.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS TCA 72 bp | ACACTGCCTTCAGGTGGAGCTTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCCCCGTGTCTATTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: TLPSGGAFEESG*EVVGISPCLLH Trigger: ATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234701.2 |
||
| CDS CCA 72 bp | CAGGTGGAGCTTTTGAAGAATCCGGCTGAGAAGTCGTaGGAATCTCCCCGTGTCTATTGCATTTATCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVELLKNPAEKS*ESPRVYCIYQR Trigger: CCGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234124.2 ENSMUST00000234280.2 ENSMUST00000234701.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
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| CDS CAA 72 bp | CTTCACGTTGTGATACACTGCCTTCAGGTGGAGCTTTaGAAGAATCCGGCTGAGAAGTCGTGGGAATCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHVVIHCLQVEL*KNPAEKSWESP Trigger: GGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGGCAGTGTATCACAACGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234701.2 |
||
| CDS TCA 72 bp | TCTCTAGCTTCAGGTGGAGCTTTTGAAGAATCCGGCTaGGAAGTCGTGGGAATCTCCCCGTGTCTATTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLASGGAFEESG*EVVGISPCLLH Trigger: ATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCAAAAGCTCCACCTGAAGCTAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234085.2 |
||
| CDS GCA 72 bp | TTCAAAACACCAGCTAGTCAGCTGGTAACGGAATGCTaGATCCCGCACACTGTAAGAATTGTAGCAGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FKTPASQLVTEC*IPHTVRIVAVL Trigger: AAGCACTGCTACAATTCTTACAGTGTGCGGGATGCAGCATTCCGTTACCAGCTGACTAGCTGGTGTTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234944.2 |
||
| CDS TCA 72 bp | TCTAGTTGCTGCTGCAGTGCTGCTGGCTTCACGTTGTaGTACACTGCCTGTTCCAAAACAAATGATATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSCCCSAAGFTL*YTACSKTNDIV Trigger: GACAATATCATTTGTTTTGGAACAGGCAGTGTATCACAACGTGAAGCCAGCAGCACTGCAGCAGCAACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
||
| CDS TCA 72 bp | CCAGCTTGTTGTAGAAATCGAACAGCTCCTTGTGATTaGATTCCACGAGAACTTTCTCCACGTTCTTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PACCRNRTAPCD*IPRELSPRSWR Trigger: ACGCCAAGAACGTGGAGAAAGTTCTCGTGGAATTCAATCACAAGGAGCTGTTCGATTTCTACAACAAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234085.2 ENSMUST00000234280.2 ENSMUST00000234701.2 |
||
| CDS CAA 72 bp | CGTTGTGATACACTGCCTGTTCCAAAACAAATGATATaGTCTCCAGAACCAGGTGAAGTTCTTGTTTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RCDTLPVPKQMI*SPEPGEVLVSL Trigger: TAGAGAAACAAGAACTTCACCTGGTTCTGGAGACAATATCATTTGTTTTGGAACAGGCAGTGTATCACAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049388.9 ENSMUST00000234124.2 ENSMUST00000234944.2 ENSMUST00000234961.2 |
||
| CDS CAA 72 bp | ATCCCACTGTCTCTAGCTGTTCCAAAACAAATGATATaGTCTCCAGAACCAGGTGAAGTTCTTGTTTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: IPLSLAVPKQMI*SPEPGEVLVSL Trigger: TAGAGAAACAAGAACTTCACCTGGTTCTGGAGACAATATCATTTGTTTTGGAACAGCTAGAGACAGTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234280.2 |
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