Pregenerated sensors for COMMD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051355Ensembl transcript IDs: ENSMUST00000057843.12, ENSMUST00000071068.9, ENSMUST00000093270.6, ENSMUST00000159081.8
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCCTCAAGCACAGTCAGATCTGTTATGGACACAGAACGCACATaGCAATGGGCTCATGCCAGGCCCCATGTGTCAGTAGACATGTTG | + |
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Preference number: 1 (lower is better) Translates to: GASSTVRSVMDTERT*QWAHARPHVSVDML Trigger: CAACATGTCTACTGACACATGGGGCCTGGCATGAGCCCATTGTCATGTGCGTTCTGTGTCCATAACAGATCTGACTGTGCTTGAGGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR GCA 90 bp | GAATTTAGGTCAGTAGGGACACACCCATGGAGGAGGCTGCAAGTCTaGTTCTTTCCAATCTCTCAGAGCTTCCTGGCTGCAGGAAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: EFRSVGTHPWRRLQV*FFPISQSFLAAGSV Trigger: CACACTTCCTGCAGCCAGGAAGCTCTGAGAGATTGGAAAGAAGCAGACTTGCAGCCTCCTCCATGGGTGTGTCCCTACTGACCTAAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR TCA 90 bp | CTGGTCAGTAAAGAGCCAGTGGTTAATGGCTGGGCAAGGGGACACTaGTGGGACTTTGAGGATTCCAGGAGAGGAAACACAAGACAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LVSKEPVVNGWARGH*WDFEDSRRGNTRQG Trigger: TCCTTGTCTTGTGTTTCCTCTCCTGGAATCCTCAAAGTCCCATCAGTGTCCCCTTGCCCAGCCATTAACCACTGGCTCTTTACTGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR GCA 90 bp | CGTTCAACAAGGATTGAAGCCTTTGGCTGGAAGATCCTTGCAGTGTaGTGTGGTGGTCCTGGATATGCCCCCAAAGGCTGTGAGTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: RSTRIEAFGWKILAV*CGGPGYAPKGCELK Trigger: CTTTAACTCACAGCCTTTGGGGGCATATCCAGGACCACCACAGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR TCA 90 bp | CTTCCCACACTTCAGGATCAGATGACAAACACGTTCAACAAGGATTaGAGCCTTTGGCTGGAAGATCCTTGCAGTGTGCTGTGGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: LPTLQDQMTNTFNKD*SLWLEDPCSVLWWS Trigger: GGACCACCACAGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACGTGTTTGTCATCTGATCCTGAAGTGTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | ATTTGCATGTCCTTGCGTACATCTGTGGTCTGGTGCACATGCATGTaGAGGCCAGAAGTTGATGTTGGGTTTCTTTCTTGTGCGTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: ICMSLRTSVVWCTCM*RPEVDVGFLSCACV Trigger: CACGCACGCACAAGAAAGAAACCCAACATCAACTTCTGGCCTCCACATGCATGTGCACCAGACCACAGATGTACGCAAGGACATGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | GGCTCATGCCAGGCCCCATGTGTCAGTAGACATGTTGTGCTTACATaGGAATTTGAAAGTCTGCTGTGGGTCCCTGCCAACAATTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: GSCQAPCVSRHVVLT*EFESLLWVPANNWF Trigger: AAACCAATTGTTGGCAGGGACCCACAGCAGACTTTCAAATTCCCATGTAAGCACAACATGTCTACTGACACATGGGGCCTGGCATGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR TCA 90 bp | AAAACAAGGGAGCCAAGAGACCATGGACTGAACCCTCCAAATTGGTaGGCCAAGATGAACCTGTTTCCTCAACTGGTGATGCTCCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: KTREPRDHGLNPPNW*AKMNLFPQLVMLQA Trigger: TGCTTGGAGCATCACCAGTTGAGGAAACAGGTTCATCTTGGCTCACCAATTTGGAGGGTTCAGTCCATGGTCTCTTGGCTCCCTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR GCA 90 bp | AGTCAGATCTGTTATGGACACAGAACGCACATGACAATGGGCTCATaGCAGGCCCCATGTGTCAGTAGACATGTTGTGCTTACATGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SQICYGHRTHMTMGS*QAPCVSRHVVLTWE Trigger: TTCCCATGTAAGCACAACATGTCTACTGACACATGGGGCCTGGCATGAGCCCATTGTCATGTGCGTTCTGTGTCCATAACAGATCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR TCA 90 bp | GTTATTGTTTGCAATGGCGTGACTCAGCAAAACAGTACGCAGGTGTaGATGGTTCTTTCCTGCTTCCACAGACCTTCATGGCCTGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: VIVCNGVTQQNSTQV*MVLSCFHRPSWPVS Trigger: ACTCACAGGCCATGAAGGTCTGTGGAAGCAGGAAAGAACCATTCACACCTGCGTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR GCA 90 bp | ATGCATATTTGCATGTCCTTGCGTACATCTGTGGTCTGGTGCACATaGATGTGGAGGCCAGAAGTTGATGTTGGGTTTCTTTCTTGTGCG | + |
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Preference number: 1 (lower is better) Translates to: MHICMSLRTSVVWCT*MWRPEVDVGFLSCA Trigger: CGCACAAGAAAGAAACCCAACATCAACTTCTGGCCTCCACATGCATGTGCACCAGACCACAGATGTACGCAAGGACATGCAAATATGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | TGGGTAGACATGCATATTTGCATGTCCTTGCGTACATCTGTGGTCTaGTGCACATGCATGTGGAGGCCAGAAGTTGATGTTGGGTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: WVDMHICMSLRTSVV*CTCMWRPEVDVGFL Trigger: AAGAAACCCAACATCAACTTCTGGCCTCCACATGCATGTGCACCAGACCACAGATGTACGCAAGGACATGCAAATATGCATGTCTACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | GACATACAGAAAGACATGGAAGACAGCAACCCTGAAATGCCTTCCTaGTCATCCTGCATGCCCTTGTACAAGTCTACTGCCTATCTATCC | + |
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Preference number: 1 (lower is better) Translates to: DIQKDMEDSNPEMPS*SSCMPLYKSTAYLS Trigger: GGATAGATAGGCAGTAGACTTGTACAAGGGCATGCAGGATGACCAGGAAGGCATTTCAGGGTTGCTGTCTTCCATGTCTTTCTGTATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | GCTGAACCTATAATCAAACCAAGGCTATGTGACATTCTGCAGGTGTaGGGTCAGAGATCTCTCAGATTGAGAAGAGGAAAGGCTCACTGC | + |
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Preference number: 1 (lower is better) Translates to: AEPIIKPRLCDILQV*GQRSLRLRRGKAHC Trigger: GCAGTGAGCCTTTCCTCTTCTCAATCTGAGAGATCTCTGACCCCACACCTGCAGAATGTCACATAGCCTTGGTTTGATTATAGGTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR TCA 90 bp | GCTGGAAAGAATTCTAAAGTGTCAATTCTGTTGACCCTGAGGCTCTaGGGTGAACCTGCCTCACCTCCTTGCACACTAAATGAGTGCTTA | + |
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Preference number: 1 (lower is better) Translates to: AGKNSKVSILLTLRL*GEPASPPCTLNECL Trigger: TAAGCACTCATTTAGTGTGCAAGGAGGTGAGGCAGGTTCACCTCAGAGCCTCAGGGTCAACAGAATTGACACTTTAGAATTCTTTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR GCA 90 bp | GTAGACATGCATATTTGCATGTCCTTGCGTACATCTGTGGTCTGGTaGACATGCATGTGGAGGCCAGAAGTTGATGTTGGGTTTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: VDMHICMSLRTSVVW*TCMWRPEVDVGFLS Trigger: AGAAAGAAACCCAACATCAACTTCTGGCCTCCACATGCATGTGCACCAGACCACAGATGTACGCAAGGACATGCAAATATGCATGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR GCA 90 bp | AAAGACATGGAAGACAGCAACCCTGAAATGCCTTCCTGGTCATCCTaGATGCCCTTGTACAAGTCTACTGCCTATCTATCCAGATGTTTC | + |
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Preference number: 1 (lower is better) Translates to: KDMEDSNPEMPSWSS*MPLYKSTAYLSRCF Trigger: GAAACATCTGGATAGATAGGCAGTAGACTTGTACAAGGGCATGCAGGATGACCAGGAAGGCATTTCAGGGTTGCTGTCTTCCATGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR GCA 90 bp | ATGACCCAGAGTTTGGAGAACTCATGTTTAAAAGCCCACACCACTTaGGCAGTTATTGTTTGCAATGGCGTGACTCAGCAAAACAGTACG | + |
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Preference number: 1 (lower is better) Translates to: MTQSLENSCLKAHTT*AVIVCNGVTQQNST Trigger: CGTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACATGAGTTCTCCAAACTCTGGGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | CTCATGTTTAAAAGCCCACACCACTTGCGCAGTTATTGTTTGCAATaGCGTGACTCAGCAAAACAGTACGCAGGTGTGAATGGTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LMFKSPHHLRSYCLQ*RDSAKQYAGVNGSF Trigger: GAAAGAACCATTCACACCTGCGTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR TCA 90 bp | GAAGTTGATGTTGGGTTTCTTTCTTGTGCGTGCGTGCACACCCTGTaGGAAAATCACTTGCTGCCATCATGTATGACAATCAGAGTTCAA | + |
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Preference number: 1 (lower is better) Translates to: EVDVGFLSCACVHTL*ENHLLPSCMTIRVQ Trigger: TTGAACTCTGATTGTCATACATGATGGCAGCAAGTGATTTTCTCACAGGGTGTGCACGCACGCACAAGAAAGAAACCCAACATCAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | CCATCATGTATGACAATCAGAGTTCAAGCCCTAGAACCCACATTATaGAAGGAGAGAATGAAATTTCCTTGTCTTCTGCCTTCTACAGGC | + |
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Preference number: 1 (lower is better) Translates to: PSCMTIRVQALEPTL*KERMKFPCLLPSTG Trigger: GCCTGTAGAAGGCAGAAGACAAGGAAATTTCATTCTCTCCTTCCATAATGTGGGTTCTAGGGCTTGAACTCTGATTGTCATACATGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CCA 90 bp | TTCTACTCAAACAGTTTTCATTACATTAGTCCCTCTCTCTTACTCTaGGTAGACATGCATATTTGCATGTCCTTGCGTACATCTGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: FYSNSFHYISPSLLL*VDMHICMSLRTSVV Trigger: GACCACAGATGTACGCAAGGACATGCAAATATGCATGTCTACCCAGAGTAAGAGAGAGGGACTAATGTAATGAAAACTGTTTGAGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR TCA 90 bp | CCCTGGATGTACTCTATGATTTCAAGACATTTTCTGAAGGGCTCTTaGGGGCTACATCTAAATCTACATCTAAAGCCATTGTTTCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: PWMYSMISRHFLKGS*GLHLNLHLKPLFPN Trigger: ATTTGGAAACAATGGCTTTAGATGTAGATTTAGATGTAGCCCTCAAGAGCCCTTCAGAAAATGTCTTGAAATCATAGAGTACATCCAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGAAGATCCTTGCAGTGTGCTGTGGTGGTCCTGGATATGCCCCCAAAGGCTGGAACTCAGAGATCTaGCTGCATCTGCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GWKILAVCCGGPGYAPKGWNSEI*LHLPPK Trigger: CTTGGGAGGCAGATGCAGGCAGATCTCTGAGTTCCA...GCCTTTGGGGGCATATCCAGGACCACCACAGCACACTGCAAGGATCTTCCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGAAGATCCTTGCAGTGTGCTGTGGTGGTCCTGGATATGCCCCCAAAGGCTGCTTTCTGCCAGGATaGTCTGCCTCTCAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GWKILAVCCGGPGYAPKGCFLPG*SASQAQ Trigger: TTGAGCCTGAGAGGCAGAGCATCCTGGCAGAAAGCA...GCCTTTGGGGGCATATCCAGGACCACCACAGCACACTGCAAGGATCTTCCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | GACAAACACGTTCAACAAGGATTGAAGCCTTTGGCTGGAAGATCCTaGCAGTGTGCTGTGGTGGTCCTGGATATGCCCCCAAAGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DKHVQQGLKPLAGRS*QCAVVVLDMPPKAV Trigger: CACAGCCTTTGGGGGCATATCCAGGACCACCACAGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACGTGTTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | CCACAGACCTTCATGGCCTGTGAGTCGACACTAGTGAGATGGCTATaGGTCCTTCCTTCCAAGGCTGCCTCAGGCCTTTATCCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PQTFMACESTLVRWL*VLPSKAASGLYPKK Trigger: TTTCTTTGGATAAAGGCCTGAGGCAGCCTTGGAAGGAAGGACCAATAGCCATCTCACTAGTGTCGACTCACAGGCCATGAAGGTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | AGTCCCTCTCTCTTACTCTGGGTAGACATGCATATTTGCATGTCCTaGCGTACATCTGTGGTCTGGTGCACATGCATGTGGAGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SPSLLLWVDMHICMS*RTSVVWCTCMWRPE Trigger: TTCTGGCCTCCACATGCATGTGCACCAGACCACAGATGTACGCAAGGACATGCAAATATGCATGTCTACCCAGAGTAAGAGAGAGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | GCTCAAAACAAGGGAGCCAAGAGACCATGGACTGAACCCTCCAAATaGGTGAGCCAAGATGAACCTGTTTCCTCAACTGGTGATGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AQNKGAKRPWTEPSK*VSQDEPVSSTGDAP Trigger: TGGAGCATCACCAGTTGAGGAAACAGGTTCATCTTGGCTCACCAATTTGGAGGGTTCAGTCCATGGTCTCTTGGCTCCCTTGTTTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | GCTTCCCACACTTCAGGATCAGATGACAAACACGTTCAACAAGGATaGAAGCCTTTGGCTGGAAGATCCTTGCAGTGTGCTGTGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: ASHTSGSDDKHVQQG*KPLAGRSLQCAVVV Trigger: GACCACCACAGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACGTGTTTGTCATCTGATCCTGAAGTGTGGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | AGGCTATGTGACATTCTGCAGGTGTGGGGTCAGAGATCTCTCAGATaGAGAAGAGGAAAGGCTCACTGCCAAAGGGAATCTGCTAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RLCDILQVWGQRSLR*RRGKAHCQRESAKG Trigger: CCCTTTAGCAGATTCCCTTTGGCAGTGAGCCTTTCCTCTTCTCAATCTGAGAGATCTCTGACCCCACACCTGCAGAATGTCACATAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTCACTGCCAAAGGGAATCTGCTAAAGGGAGTCCACCATTTTGCTCCAAGCAGGTTCTACTACACTaGAGCTTAGAGCACACACTG | + |
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Preference number: 2 (lower is better) Translates to: KAHCQRESAKGSPPFCSKQVLLH*SLEHTL Trigger: CAGTGTGTGCTCTAAGCTGCAGTGTAGTAGAACCTG...CTTGGAGCAAAATGGTGGACTCCCTTTAGCAGATTCCCTTTGGCAGTGAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | GGAGAACTCATGTTTAAAAGCCCACACCACTTGCGCAGTTATTGTTaGCAATGGCGTGACTCAGCAAAACAGTACGCAGGTGTGAATGGT | + |
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Preference number: 2 (lower is better) Translates to: GELMFKSPHHLRSYC*QWRDSAKQYAGVNG Trigger: ACCATTCACACCTGCGTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACATGAGTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTTGCTCCAAGCTCAGAAGGCTATCTGGACAATGGTAGACTTCAACCTTAGCATTGGTGAGCCAAGATaGACCTGTTTCCTCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: ILLQAQKAIWTMVDFNLSIGEPR*TCFLNW Trigger: CCAGTTGAGGAAACAGGTTCATCTTGGCTCACCAAT...GCTAAGGTTGAAGTCTACCATTGTCCAGATAGCCTTCTGAGCTTGGAGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCATGCCCTTGTACAAGTCTACTGCCTATCTATCCAGATGTTTCCTCATCCTGCCTCACCTCCTTaGACACTAAATGAGTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: ILHALVQVYCLSIQMFPHPASPP*TLNECL Trigger: TAAGCACTCATTTAGTGTGCAAGGAGGTGAGGCAGG...ATGAGGAAACATCTGGATAGATAGGCAGTAGACTTGTACAAGGGCATGCAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCATGCCCTTGTACAAGTCTACTGCCTATCTATCCAGATGTTTCCTCATAAGATCCTTGCAGTGTaGTGTGGTGGTCCTGGATAT | + |
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Preference number: 2 (lower is better) Translates to: ILHALVQVYCLSIQMFPHKILAV*CGGPGY Trigger: ATATCCAGGACCACCACAGCACACTGCAAGGATCTT...ATGAGGAAACATCTGGATAGATAGGCAGTAGACTTGTACAAGGGCATGCAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | AATGACCCAGAGTTTGGAGAACTCATGTTTAAAAGCCCACACCACTaGCGCAGTTATTGTTTGCAATGGCGTGACTCAGCAAAACAGTAC | + |
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Preference number: 2 (lower is better) Translates to: NDPEFGELMFKSPHH*RSYCLQWRDSAKQY Trigger: GTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACATGAGTTCTCCAAACTCTGGGTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | TGTGTGTTTACATATGTGTGTCTTTTACTCATGAATCCAGGGCTCTaGAAGCAGAGATCCATGTGCACTGGCTGTGAGCATAGTATCGAG | + |
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Preference number: 2 (lower is better) Translates to: CVFTYVCLLLMNPGL*KQRSMCTGCEHSIE Trigger: CTCGATACTATGCTCACAGCCAGTGCACATGGATCTCTGCTTCAAGAGCCCTGGATTCATGAGTAAAAGACACACATATGTAAACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAAAGAAACACTCTTATCCTCCATTTCACAGCAGGACACTTTATCCAATTCTGGGTTTCTTTCTTGTaGGTGCGTGCACACCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: IQRNTLILHFTAGHFIQFWVSFL*VRAHPV Trigger: CACAGGGTGTGCACGCACGCACAAGAAAGAAACCCA...GAATTGGATAAAGTGTCCTGCTGTGAAATGGAGGATAAGAGTGTTTCTTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | CTAATGTCTTTACATAAAAGCAGTTGCCCAGCAGTAGTGACGCACGCCTTTAGTTGCGCAGTTATTGTTTaGAATGGCGTGACTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LMSLHKSSCPAVVTHAFSCAVIV*NGVTQQ Trigger: TTGCTGAGTCACGCCATTGCAAACAATAACTGCGCA...ACTAAAGGCGTGCGTCACTACTGCTGGGCAACTGCTTTTATGTAAAGACATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAAAGGGAGTCCACCATTTTGCTCCAAGCTCAGAAGGCTATCTGGACAATGGCTTGTACAAGTCTACTaGCTATCTATCCAGATGTTT | + |
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Preference number: 2 (lower is better) Translates to: AKGSPPFCSKLRRLSGQWLVQVY*LSIQMF Trigger: AAACATCTGGATAGATAGGCAGTAGACTTGTACAAG...CCATTGTCCAGATAGCCTTCTGAGCTTGGAGCAAAATGGTGGACTCCCTTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | TCAAGCCCTAGAACCCACATTATGGAAGGAGAGAATGAAATTTCCTaGTCTTCTGCCTTCTACAGGCATTCTGTAGCATGTGTGTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: SSPRTHIMEGENEIS*SSAFYRHSVACVFY Trigger: ATAGAACACACATGCTACAGAATGCCTGTAGAAGGCAGAAGACAAGGAAATTTCATTCTCTCCTTCCATAATGTGGGTTCTAGGGCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAAGAAACACTCTTATCCTCCATTTCACAGCAGGACACTTTATCCAATTCCTTTCAAAGGGTCAGTaGAGAAAGTCTGTGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: IQRNTLILHFTAGHFIQFLSKGQ*RKSVSS Trigger: GCTGCTCACAGACTTTCTCCACTGACCCTTTGAAAG...GAATTGGATAAAGTGTCCTGCTGTGAAATGGAGGATAAGAGTGTTTCTTTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR CCA 90 bp | CTAATGTCTTTACATAAAAGCAGTTGCCCAGCAGTAGTGACGCACGCCTTTAGTACAGCTTTTAGTCCCTaGATGTACTCTATGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: LMSLHKSSCPAVVTHAFSTAFSP*MYSMIS Trigger: TGAAATCATAGAGTACATCCAGGGACTAAAAGCTGT...ACTAAAGGCGTGCGTCACTACTGCTGGGCAACTGCTTTTATGTAAAGACATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR-3UTR CCA 90 bp | TACATTAGTCCCTCTCTCTTACTCTGGGTAGACATGCATATTTGCATGTCCTTGGTGTGTACCACCACTTaGCAAATTTCAGTATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: YISPSLLLWVDMHICMSLVCTTT*QISVCF Trigger: AAAACATACTGAAATTTGCCAAGTGGTGGTACACAC...CAAGGACATGCAAATATGCATGTCTACCCAGAGTAAGAGAGAGGGACTAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| 3UTR CAA 90 bp | TCCCTGGATGTACTCTATGATTTCAAGACATTTTCTGAAGGGCTCTaGAGGGCTACATCTAAATCTACATCTAAAGCCATTGTTTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLDVLYDFKTFSEGL*RATSKSTSKAIVSK Trigger: TTTGGAAACAATGGCTTTAGATGTAGATTTAGATGTAGCCCTCAAGAGCCCTTCAGAAAATGTCTTGAAATCATAGAGTACATCCAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCCAAAGAAACACTCTTATCCTCCATTTCACAGCAGGACACTTTATCCAATTCAATTTCCTTGTCTTCTaGCTTCTACAGGCATTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IQRNTLILHFTAGHFIQFNFLVF*LLQAFC Trigger: ACAGAATGCCTGTAGAAGGCAGAAGACAAGGAAATT...GAATTGGATAAAGTGTCCTGCTGTGAAATGGAGGATAAGAGTGTTTCTTTGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | CAGACCTTCATGGCCTGTGAGTCGACACTAGTGAGATaGCTATTGGTCCTTCCTTCCAAGGCTGCCTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QTFMACESTLVR*LLVLPSKAASG Trigger: GCCTGAGGCAGCCTTGGAAGGAAGGACCAATAGCCATCTCACTAGTGTCGACTCACAGGCCATGAAGGTCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | GTGCTGTGGTGGTCCTGGATATGCCCCCAAAGGCTGTaGGTTAAAGGTTTGGTCATTTGCCTGTGGTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLWWSWICPQRL*VKGLVICLWCC Trigger: GCAGCACCACAGGCAAATGACCAAACCTTTAACTCACAGCCTTTGGGGGCATATCCAGGACCACCACAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | TCAGTAGGGACACACCCATGGAGGAGGCTGCAAGTCTaGTTCTTTCCAATCTCTCAGAGCTTCCTGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVGTHPWRRLQV*FFPISQSFLAA Trigger: TGCAGCCAGGAAGCTCTGAGAGATTGGAAAGAAGCAGACTTGCAGCCTCCTCCATGGGTGTGTCCCTACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | TGGTTCTTTCCTGCTTCCACAGACCTTCATGGCCTGTaGGTCGACACTAGTGAGATGGCTATTGGTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: WFFPASTDLHGL*VDTSEMAIGPS Trigger: GGAAGGACCAATAGCCATCTCACTAGTGTCGACTCACAGGCCATGAAGGTCTGTGGAAGCAGGAAAGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | AAAGAGCCAGTGGTTAATGGCTGGGCAAGGGGACACTaGTGGGACTTTGAGGATTCCAGGAGAGGAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: KEPVVNGWARGH*WDFEDSRRGNT Trigger: TGTGTTTCCTCTCCTGGAATCCTCAAAGTCCCATCAGTGTCCCCTTGCCCAGCCATTAACCACTGGCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | GCCTCTCAGGCTCAAAACAAGGGAGCCAAGAGACCATaGACTGAACCCTCCAAATTGGTGAGCCAAGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASQAQNKGAKRP*TEPSKLVSQDE Trigger: TTCATCTTGGCTCACCAATTTGGAGGGTTCAGTCCATGGTCTCTTGGCTCCCTTGTTTTGAGCCTGAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | CAGGCCCCATGTGTCAGTAGACATGTTGTGCTTACATaGGAATTTGAAAGTCTGCTGTGGGTCCCTGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QAPCVSRHVVLT*EFESLLWVPAN Trigger: GTTGGCAGGGACCCACAGCAGACTTTCAAATTCCCATGTAAGCACAACATGTCTACTGACACATGGGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | GAAAGAAGAACTTCCAGAAGACCTAGGGTAGACTCCTaGGAGCCAGAGTGCTGTTACCACAGGCAAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ERRTSRRPRVDS*EPECCYHRQEN Trigger: GTTCTCTTGCCTGTGGTAACAGCACTCTGGCTCTCAGGAGTCTACCCTAGGTCTTCTGGAAGTTCTTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | TGCAATGGCGTGACTCAGCAAAACAGTACGCAGGTGTaGATGGTTCTTTCCTGCTTCCACAGACCTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: CNGVTQQNSTQV*MVLSCFHRPSW Trigger: CCATGAAGGTCTGTGGAAGCAGGAAAGAACCATTCACACCTGCGTACTGTTTTGCTGAGTCACGCCATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | GAAGACAGCAACCCTGAAATGCCTTCCTGGTCATCCTaGATGCCCTTGTACAAGTCTACTGCCTATCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: EDSNPEMPSWSS*MPLYKSTAYLS Trigger: GGATAGATAGGCAGTAGACTTGTACAAGGGCATGCAGGATGACCAGGAAGGCATTTCAGGGTTGCTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | TGTTATGGACACAGAACGCACATGACAATGGGCTCATaGCAGGCCCCATGTGTCAGTAGACATGTTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CYGHRTHMTMGS*QAPCVSRHVVL Trigger: AAGCACAACATGTCTACTGACACATGGGGCCTGGCATGAGCCCATTGTCATGTGCGTTCTGTGTCCATAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | AAAGACATGGAAGACAGCAACCCTGAAATGCCTTCCTaGTCATCCTGCATGCCCTTGTACAAGTCTACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KDMEDSNPEMPS*SSCMPLYKSTA Trigger: GGCAGTAGACTTGTACAAGGGCATGCAGGATGACCAGGAAGGCATTTCAGGGTTGCTGTCTTCCATGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCCAGGGCTCTTGAAGCAGAGATCCATGTGCACTGGCTGTGAGCATAGTATCCATATTTGCATGTCCTaGCGTACATCTGTGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NPGLLKQRSMCTGCEHSIHICMS*RTSVVW Trigger: CCAGACCACAGATGTACGCAAGGACATGCAAATATG...GATACTATGCTCACAGCCAGTGCACATGGATCTCTGCTTCAAGAGCCCTGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | AGTCCCTCTCTCTTACTCTGGGTAGACATGCATATTTaGATGTCCTTGCGTACATCTGTGGTCTGGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SPSLLLWVDMHI*MSLRTSVVWCT Trigger: TGTGCACCAGACCACAGATGTACGCAAGGACATGCAAATATGCATGTCTACCCAGAGTAAGAGAGAGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | TCCTTGCGTACATCTGTGGTCTGGTGCACATGCATGTaGAGGCCAGAAGTTGATGTTGGGTTTCTTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLRTSVVWCTCM*RPEVDVGFLSC Trigger: ACAAGAAAGAAACCCAACATCAACTTCTGGCCTCCACATGCATGTGCACCAGACCACAGATGTACGCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | GAGTCCACCATTTTGCTCCAAGCTCAGAAGGCTATCTaGACAATGGTAGACTTCAACCTTAGCAGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESTILLQAQKAI*TMVDFNLSSRA Trigger: TGCTCTGCTGCTAAGGTTGAAGTCTACCATTGTCCAGATAGCCTTCTGAGCTTGGAGCAAAATGGTGGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | GTTGGGTTTCTTTCTTGTGCGTGCGTGCACACCCTGTaGGAAAATCACTTGCTGCCATCATGTATGACAATC | + |
|
Preference number: 3 (lower is better) Translates to: VGFLSCACVHTL*ENHLLPSCMTI Trigger: GATTGTCATACATGATGGCAGCAAGTGATTTTCTCACAGGGTGTGCACGCACGCACAAGAAAGAAACCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | CTTCAGGATCAGATGACAAACACGTTCAACAAGGATTaGAGCCTTTGGCTGGAAGATCCTTGCAGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQDQMTNTFNKD*SLWLEDPCSVL Trigger: CAGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACGTGTTTGTCATCTGATCCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | GACTTCAACCTTAGCAGCAGAGCAACAATGGGTGACTaGGTGGGAAGTAGACCTAGGCCATCACAAATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DFNLSSRATMGD*VGSRPRPSQIE Trigger: TTCTATTTGTGATGGCCTAGGTCTACTTCCCACTCAGTCACCCATTGTTGCTCTGCTGCTAAGGTTGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | CAGAAGTTGATGTTGGGTTTCTTTCTTGTGCGTGCGTaGACACCCTGTGAGAAAATCACTTGCTGCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: QKLMLGFFLVRA*TPCEKITCCHH Trigger: ATGATGGCAGCAAGTGATTTTCTCACAGGGTGTGCACGCACGCACAAGAAAGAAACCCAACATCAACTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | AGTCTGCTTCTTTCCAATCTCTCAGAGCTTCCTGGCTaGAGGAAGTGTGTAATTAGGCTTCACTGCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLLSNLSELPG*RKCVIRLHCFL Trigger: CAGAAAGCAGTGAAGCCTAATTACACACTTCCTGCAGCCAGGAAGCTCTGAGAGATTGGAAAGAAGCAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | TGTTTAAAAGCCCACACCACTTGCGCAGTTATTGTTTaGAATGGCGTGACTCAGCAAAACAGTACGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLKAHTTCAVIV*NGVTQQNSTQV Trigger: CACCTGCGTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | CAGAGATCTCTCAGATTGAGAAGAGGAAAGGCTCACTaGCAAAGGGAATCTGCTAAAGGGAGTCCACCATTT | + |
|
Preference number: 3 (lower is better) Translates to: QRSLRLRRGKAH*QRESAKGSPPF Trigger: AAATGGTGGACTCCCTTTAGCAGATTCCCTTTGGCAGTGAGCCTTTCCTCTTCTCAATCTGAGAGATCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | ATGCATATTTGCATGTCCTTGCGTACATCTGTGGTCTaGTGCACATGCATGTGGAGGCCAGAAGTTGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: MHICMSLRTSVV*CTCMWRPEVDV Trigger: AACATCAACTTCTGGCCTCCACATGCATGTGCACCAGACCACAGATGTACGCAAGGACATGCAAATATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | AATTCCTTCCTAAGGGAAGGAGCCAGTGCTTTCAGATaGGGTGTCGGAAGCTTTGTGTCTCCACGTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: NSFLREGASAFR*GVGSFVSPRLF Trigger: AAATAAACGTGGAGACACAAAGCTTCCGACACCCCATCTGAAAGCACTGGCTCCTTCCCTTAGGAAGGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | AAAAGCCCACACCACTTGCGCAGTTATTGTTTGCAATaGCGTGACTCAGCAAAACAGTACGCAGGTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KSPHHLRSYCLQ*RDSAKQYAGVN Trigger: ATTCACACCTGCGTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTGCTCCAAGCTCAGAAGGCTATCTGGACAATGGTAGACTTCAACCTTAGCCACGTTCAACAAGGATaGAAGCCTTTGGCTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILLQAQKAIWTMVDFNLSHVQQG*KPLAGR Trigger: TCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACGTG...GCTAAGGTTGAAGTCTACCATTGTCCAGATAGCCTTCTGAGCTTGGAGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | AATTCTAAAGTGTCAATTCTGTTGACCCTGAGGCTCTaGGGTGAACCTGCCTCACCTCCTTGCACACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: NSKVSILLTLRL*GEPASPPCTLN Trigger: ATTTAGTGTGCAAGGAGGTGAGGCAGGTTCACCTCAGAGCCTCAGGGTCAACAGAATTGACACTTTAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | ACACTTTATCCAATTCTAGACCTTGTGGGAGTGCCCTaGGAACAGAAAGATGCTTGTACAGCTTTTAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TLYPILDLVGVP*EQKDACTAFSP Trigger: GGGACTAAAAGCTGTACAAGCATCTTTCTGTTCCCAGGGCACTCCCACAAGGTCTAGAATTGGATAAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAACACAAGACAAGGAGAAAGAGATTCACCAGGACAAAAGGAAGGAAGAGGCAGAGACAAGCAAGATaGGACTTTGAGAGGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RKHKTRRKRFTRTKGRKRQRQAR*DFERFL Trigger: GAGAAACCTCTCAAAGTCCAATCTTGCTTGTCTCTG...CCTCTTCCTTCCTTTTGTCCTGGTGAATCTCTTTCTCCTTGTCTTGTGTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR GCA 72 bp | AGTTTGGAGAACTCATGTTTAAAAGCCCACACCACTTaGGCAGTTATTGTTTGCAATGGCGTGACTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLENSCLKAHTT*AVIVCNGVTQQ Trigger: TTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACATGAGTTCTCCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | ATAATCAAACCAAGGCTATGTGACATTCTGCAGGTGTaGGGTCAGAGATCTCTCAGATTGAGAAGAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IIKPRLCDILQV*GQRSLRLRRGK Trigger: CTTTCCTCTTCTCAATCTGAGAGATCTCTGACCCCACACCTGCAGAATGTCACATAGCCTTGGTTTGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTGCTCCAAGCTCAGAAGGCTATCTGGACAATGGTAGACTTCAACCTTAGCCTAATGACCCAGAGTTaGGAGAACTCATGTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ILLQAQKAIWTMVDFNLSLMTQS*ENSCLK Trigger: TTTTAAACATGAGTTCTCCAAACTCTGGGTCATTAG...GCTAAGGTTGAAGTCTACCATTGTCCAGATAGCCTTCTGAGCTTGGAGCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | AGAATATTATATGATACACAATGTGTCCTGTGTGGATaGCTAACAGCTCTCCCAAGAACAAACAACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RILYDTQCVLCG*LTALPRTNNSW Trigger: CCAGCTGTTGTTTGTTCTTGGGAGAGCTGTTAGTCATCCACACAGGACACATTGTGTATCATATAATATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | TCTAGATTTATACCACACCTATTCAACTCCATCAGCTaGTCCCAGGAGAATCTCACTAGATTCCAGTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRFIPHLFNSIS*SQENLTRFQFN Trigger: ATTAAACTGGAATCTAGTGAGATTCTCCTGGGACCAGCTGATGGAGTTGAATAGGTGTGGTATAAATCTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | AACAGTTTTCATTACATTAGTCCCTCTCTCTTACTCTaGGTAGACATGCATATTTGCATGTCCTTGCGTACA | + |
|
Preference number: 3 (lower is better) Translates to: NSFHYISPSLLL*VDMHICMSLRT Trigger: TGTACGCAAGGACATGCAAATATGCATGTCTACCCAGAGTAAGAGAGAGGGACTAATGTAATGAAAACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CCA 72 bp | TGGGAACAGAAAGATGCTTGTACAGCTTTTAGTCCCTaGATGTACTCTATGATTTCAAGACATTTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: WEQKDACTAFSP*MYSMISRHFLK Trigger: CTTCAGAAAATGTCTTGAAATCATAGAGTACATCCAGGGACTAAAAGCTGTACAAGCATCTTTCTGTTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | TACTCTATGATTTCAAGACATTTTCTGAAGGGCTCTTaGGGGCTACATCTAAATCTACATCTAAAGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: YSMISRHFLKGS*GLHLNLHLKPL Trigger: CAATGGCTTTAGATGTAGATTTAGATGTAGCCCTCAAGAGCCCTTCAGAAAATGTCTTGAAATCATAGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | ATTCTGAGATCTGTGCCAATTCATATCCCTGGCTTGTaGAAGAATAGAAATCACATAAAACCCTCTAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: ILRSVPIHIPGL*KNRNHIKPSNV Trigger: GACATTAGAGGGTTTTATGTGATTTCTATTCTTTCACAAGCCAGGGATATGAATTGGCACAGATCTCAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR TCA 72 bp | ATGTGCACTGGCTGTGAGCATAGTATCGAGATACAATaGGCAAGGACATCATTTAGTTTTATAATCACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: MCTGCEHSIEIQ*ARTSFSFIITF Trigger: AAACGTGATTATAAAACTAAATGATGTCCTTGCTCATTGTATCTCGATACTATGCTCACAGCCAGTGCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAAGATCCTTGCAGTGTGCTGTGGTGGTCCTGGATATGCCCCCAAAGGCGCCCGCTCAGGGACTTaGCACCCTCCAGATCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GWKILAVCCGGPGYAPKGARSGT*HPPDRP Trigger: CGGGCGATCTGGAGGGTGGCAAGTCCCTGAGCGGGC...GCCTTTGGGGGCATATCCAGGACCACCACAGCACACTGCAAGGATCTTCCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | CACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTGTGAGCAGGCCCGCTCAGGGACTTaGCACCCTCCAGATCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HQWANRTFKGSVEKVCEQARSGT*HPPDRP Trigger: CGGGCGATCTGGAGGGTGGCAAGTCCCTGAGCGGGC...CTGCTCACAGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | GACCCAACCATGGAAGAATCAGGGAAGAGCAGCCCCTaGGGCCACTCCTGCGATTTGGTCTGGGGTAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPTMEESGKSSP*GHSCDLVWGSR Trigger: TCTGCTACCCCAGACCAAATCGCAGGAGTGGCCCAAGGGGCTGCTCTTCCCTGATTCTTCCATGGTTGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGTTGTCCCAGCGGCTCTaGTTCATGAGACTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFTSNAPSSSLQLGCLHQLSQRL*FMRLSR Trigger: CCGAGAGAGTCTCATGAAGCAGAGCCGCTGGGACAA...CTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTGGAGAAAGTCTGTGAGCAGCTTCACTTCAAACGCCCCTTCCTCCAGCGGGTCCTCCACACTCTaGTATGATGCAAGCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GQWRKSVSSFTSNAPSSSGSSTL*YDASTQ Trigger: TTGGGTGCTTGCATCATACCAGAGTGTGGAGGACCC...GCTGGAGGAAGGGGCGTTTGAAGTGAAGCTGCTCACAGACTTTCTCCACTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
||
| 3UTR CAA 72 bp | CTGTGGTCTGGTGCACATGCATGTGGAGGCCAGAAGTaGATGTTGGGTTTCTTTCTTGTGCGTGCGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LWSGAHACGGQK*MLGFFLVRACT Trigger: TGTGCACGCACGCACAAGAAAGAAACCCAACATCAACTTCTGGCCTCCACATGCATGTGCACCAGACCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | GTTCAACAAGGATTGAAGCCTTTGGCTGGAAGATCCTaGCAGTGTGCTGTGGTGGTCCTGGATATGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQQGLKPLAGRS*QCAVVVLDMPP Trigger: TGGGGGCATATCCAGGACCACCACAGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTCTCCAGTGTGAATTCTaGCTCCAGTCCCCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGNTSGQTGLSKGQWRKSLQCEF*LQSPGS Trigger: GGACCCCGGGGACTGGAGCCAGAATTCACACTGGAG...AGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATACTCTCTTCTACCTCTaGCAGCTTCTTCAGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFTSNAPSSSLQLGCLHTLFYL*QLLQDL Trigger: CAAATCCTGAAGAAGCTGTCAGAGGTAGAAGAGAGT...ATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | AGACTTTCATGCATGTATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGAAGCAGCCCCTCCTCCTaGGGTGATGCCTGTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RLSCMYTMSFGNTSGQTGSSPSS*GDACGT Trigger: GGTCCCACAGGCATCACCCCAGGAGGAGGGGCTGCT...TCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATACATGCATGAAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATTGCCACCTTGCTTTTTaGTTTGAGCAGTCAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSFTSNAPSSSLQLGCLHCHLAF*FEQSGM Trigger: CATTCCTGACTGCTCAAACCAAAAAGCAAGGTGGCA...ATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | TTCATGGCCTGTGAGTCGACACTAGTGAGATGGCTATaGGTCCTTCCTTCCAAGGCTGCCTCAGGCCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FMACESTLVRWL*VLPSKAASGLY Trigger: ATAAAGGCCTGAGGCAGCCTTGGAAGGAAGGACCAATAGCCATCTCACTAGTGTCGACTCACAGGCCATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | AAGGGAGCCAAGAGACCATGGACTGAACCCTCCAAATaGGTGAGCCAAGATGAACCTGTTTCCTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGAKRPWTEPSK*VSQDEPVSSTG Trigger: ACCAGTTGAGGAAACAGGTTCATCTTGGCTCACCAATTTGGAGGGTTCAGTCCATGGTCTCTTGGCTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAAAAATTCAGATTCCTTaGGAAGTCCTCTCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLHFKRPFLQPSVRLPASKIQIP*EVLSSS Trigger: CGAAGATGAGAGGACTTCTCAAGGAATCTGAATTTT...TGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071068.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGGAGATGACTGCAGCTTaGTCACTGGTGATGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TMSFGNTSGQTGLSKGQWEMTAA*SLVMPP Trigger: AGGTGGCATCACCAGTGAGCAAGCTGCAGTCATCTC...CCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | TATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGGCGGAACTCCTCCGGTaGCACTTCCGGATAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YTMSFGNTSGQTGLSKGQAELLR*HFRIEL Trigger: CAACTCTATCCGGAAGTGCCACCGGAGGAGTTCCGC...CTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | CTCTTACTCTGGGTAGACATGCATATTTGCATGTCCTaGCGTACATCTGTGGTCTGGTGCACATGCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLWVDMHICMS*RTSVVWCTCMW Trigger: CCACATGCATGTGCACCAGACCACAGATGTACGCAAGGACATGCAAATATGCATGTCTACCCAGAGTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | TCAGATGACAAACACGTTCAACAAGGATTGAAGCCTTaGGCTGGAAGATCCTTGCAGTGTGCTGTGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDDKHVQQGLKP*AGRSLQCAVVV Trigger: GACCACCACAGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACGTGTTTGTCATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGCCTGCATCAGCCTGTTaGTACTCTCTTCTACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFGNTSGQTGLSKGQWRKPASAC*YSLLPL Trigger: CAGAGGTAGAAGAGAGTATCAACAGGCTGATGCAGG...CTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGACCTGGAACCTCATCTaGGGGGCAATGTGTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGNTSGQTGLSKGQWRKTWNLI*GAMCMF Trigger: GAACATACACATTGCCCCGCAGATGAGGTTCCAGGT...CTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAAGAGACCATGGACTGAACCCTCCAAATTGGTGAGCCAAGATGAACCTAGGAATGCCTCTAACTaGTTGAAATCCATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAKRPWTEPSKLVSQDEPRNASN*LKSMSA Trigger: TGCAGACATGGATTTCAACCAGTTAGAGGCATTCCT...AGGTTCATCTTGGCTCACCAATTTGGAGGGTTCAGTCCATGGTCTCTTGGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | AACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTGTGAGCTGCCACCTTGCTTTTTaGTTTGAGCAGTCAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NTSGQTGLSKGQWRKSVSCHLAF*FEQSGM Trigger: CATTCCTGACTGCTCAAACCAAAAAGCAAGGTGGCA...GCTCACAGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAATATGAGACCCTCTCCAGTGGAACAGATGGGAAAATAAAGAACCCAACAGCGGAACTCCTCCGGTaGCACTTCCGGATAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYETLSSGTDGKIKNPTAELLR*HFRIEL Trigger: CAACTCTATCCGGAAGTGCCACCGGAGGAGTTCCGC...TGTTGGGTTCTTTATTTTCCCATCTGTTCCACTGGAGAGGGTCTCATATTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTTCATGCATGTATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGATTGTCCCAGCGGCTCTaGTTCATGAGACTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSCMYTMSFGNTSGQTGLSQRL*FMRLSR Trigger: CCGAGAGAGTCTCATGAAGCAGAGCCGCTGGGACAA...TCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATACATGCATGAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTTCATGCATGTATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGAGCCGTGACTGAGACTTaGCATCGACTCTCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSCMYTMSFGNTSGQTGAVTET*HRLSSS Trigger: TGAGCTGGAGAGTCGATGGCAAGTCTCAGTCACGGC...TCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATACATGCATGAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | CTAAAATATGAGACCCTCTCCAGTGGAACAGATGGGAAAATAAAGAACCCAACAGCCGTGACTGAGACTTaGCATCGACTCTCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKYETLSSGTDGKIKNPTAVTET*HRLSSS Trigger: TGAGCTGGAGAGTCGATGGCAAGTCTCAGTCACGGC...TGTTGGGTTCTTTATTTTCCCATCTGTTCCACTGGAGAGGGTCTCATATTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | TTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCCTAGCTTCTTCAGGATTTaGTTGACTTTAACTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FTSNAPSSSLQLGCLHQPSFFRI*LTLTSS Trigger: TGATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCT...AGGCTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTACTCTCTTCTACCTCTaGCAGCTTCTTCAGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGNTSGQTGLSKGQWRKSTLFYL*QLLQDL Trigger: CAAATCCTGAAGAAGCTGTCAGAGGTAGAAGAGAGT...AGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS-3UTR TCA 90 bp | TATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGCCTGCATCAGCCTGTTaGTACTCTCTTCTACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTMSFGNTSGQTGLSKGQPASAC*YSLLPL Trigger: CAGAGGTAGAAGAGAGTATCAACAGGCTGATGCAGG...CTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGCAGTTCAAAGTAAGCTaGAACCTGGAACCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TMSFGNTSGQTGLSKGQWQFKVS*NLEPHL Trigger: CAGATGAGGTTCCAGGTTGCAGCTTACTTTGAACTG...CCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
||
| 3UTR CAA 72 bp | ACTTCAGGATCAGATGACAAACACGTTCAACAAGGATaGAAGCCTTTGGCTGGAAGATCCTTGCAGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGSDDKHVQQG*KPLAGRSLQCA Trigger: AGCACACTGCAAGGATCTTCCAGCCAAAGGCTTCAATCCTTGTTGAACGTGTTTGTCATCTGATCCTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | ATGTTTAAAAGCCCACACCACTTGCGCAGTTATTGTTaGCAATGGCGTGACTCAGCAAAACAGTACGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MFKSPHHLRSYC*QWRDSAKQYAG Trigger: ACCTGCGTACTGTTTTGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | GAGTTTGGAGAACTCATGTTTAAAAGCCCACACCACTaGCGCAGTTATTGTTTGCAATGGCGTGACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EFGELMFKSPHH*RSYCLQWRDSA Trigger: TGCTGAGTCACGCCATTGCAAACAATAACTGCGCAAGTGGTGTGGGCTTTTAAACATGAGTTCTCCAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | CATGTGTCAGTAGACATGTTGTGCTTACATGGGAATTaGAAAGTCTGCTGTGGGTCCCTGCCAACAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVSVDMLCLHGN*KVCCGSLPTIG Trigger: ACCAATTGTTGGCAGGGACCCACAGCAGACTTTCAAATTCCCATGTAAGCACAACATGTCTACTGACACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR TCA 90 bp | CTAATGTCTTTACATAAAAGCAGTTGCCCAGCAGTAGTGACGCACGCCTTTAGTACTCTCTTCTACCTCTaGCAGCTTCTTCAGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LMSLHKSSCPAVVTHAFSTLFYL*QLLQDL Trigger: CAAATCCTGAAGAAGCTGTCAGAGGTAGAAGAGAGT...ACTAAAGGCGTGCGTCACTACTGCTGGGCAACTGCTTTTATGTAAAGACATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGGTTGAAATCCATGTCTaGAGATGCAATAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFGNTSGQTGLSKGQWRKVEIHV*RCNRQQ Trigger: CTGCTGTCTATTGCATCTGCAGACATGGATTTCAAC...CTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGGAATGCCTCTAACTaGTTGAAATCCATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TMSFGNTSGQTGLSKGQWRNASN*LKSMSA Trigger: TGCAGACATGGATTTCAACCAGTTAGAGGCATTCCT...CCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTCGGATTTTTATCTTGTaGCTCTTCCAAAACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGNTSGQTGLSKGQWRKSRIFIL*LFQNLE Trigger: CTCCAAGTTTTGGAAGAGCCACAAGATAAAAATCCG...AGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | ATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTATCCATGTCTGCAGATaGAATAGACAGCAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IQCLLVTPVGKQDFQRVSIHVCR*NRQQFL Trigger: CAAGAACTGCTGTCTATTGCATCTGCAGACATGGAT...ACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
||
| CDS-3UTR GCA 90 bp | CAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAAGCTTCTTCAGGATTTaGTTGACTTTAACTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QCLLVTPVGKQDFQRVSGSFFRI*LTLTSS Trigger: TGATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCT...TCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | CAGATCAACTTTACTTGGGTGACTCACAGGTTATATAGTTTTGAGGAAGGGGGAGTTGAAATCCATGTCTaGAGATGCAATAGACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QINFTWVTHRLYSFEEGGVEIHV*RCNRLE Trigger: CTCAAGTCTATTGCATCTGCAGACATGGATTTCAAC...TCCCCCTTCCTCAAAACTATATAACCTGTGAGTCACCCAAGTAAAGTTGATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS-3UTR CCA 90 bp | GACTTTCATGCATGTATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACCGGATTTTTATCTTGTaGCTCTTCCAAAACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFHACIQCLLVTPVGKQDRIFIL*LFQNLE Trigger: CTCCAAGTTTTGGAAGAGCCACAAGATAAAAATCCG...GTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATACATGCATGAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTCATGCATGTATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACAGCTTCTTCAGGATTTaGTTGACTTTAACTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DFHACIQCLLVTPVGKQDSFFRI*LTLTSS Trigger: TGATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCT...GTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATACATGCATGAAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| 3UTR CAA 72 bp | GTACTCTATGATTTCAAGACATTTTCTGAAGGGCTCTaGAGGGCTACATCTAAATCTACATCTAAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLYDFKTFSEGL*RATSKSTSKAI Trigger: AATGGCTTTAGATGTAGATTTAGATGTAGCCCTCAAGAGCCCTTCAGAAAATGTCTTGAAATCATAGAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
||
| CDS TCA 90 bp | CCGGTGGCACTTCCGGATAGAGTTGGCTGTGCAGCAGCTCCTCCGTaGCACCCGAGTGTCCGTGAAAGGCGTTCTGCGCTAGGCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVALPDRVGCAAAPP*HPSVRERRSALGRS Trigger: TGAGCGGCCTAGCGCAGAACGCCTTTCACGGACACTCGGGTGTCACGGAGGAGCTGCTGCACAGCCAACTCTATCCGGAAGTGCCACCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS CCA 90 bp | GAGAAGTCCTCTCATCTTCGCCAGGAAGGGGCGGAACTCCTCCGGTaGCACTTCCGGATAGAGTTGGCTGTGCAGCAGCTCCTCCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: EKSSHLRQEGAELLR*HFRIELAVQQLLRD Trigger: GTCACGGAGGAGCTGCTGCACAGCCAACTCTATCCGGAAGTGCCACCGGAGGAGTTCCGCCCCTTCCTGGCGAAGATGAGAGGACTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071068.9 ENSMUST00000093270.6 ENSMUST00000159081.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGAGGCCCCGAAGGCCGTaGTCCCAGCGGCTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFTSNAPSSSLQLGCLHQRPRRP*SQRLCF Trigger: GAAGCAGAGCCGCTGGGACAACGGCCTTCGGGGCCT...CTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR CAA 90 bp | TTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCCTAGGCCCCGAAGGCCGTaGTCCCAGCGGCTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTSNAPSSSLQLGCLHQPRPRRP*SQRLCF Trigger: GAAGCAGAGCCGCTGGGACAACGGCCTTCGGGGCCT...AGGCTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAAGCCCGCTCAGGGACTaGCCACCCTCCAGATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QLHFKRPFLQPSVRLPASSPLRD*PPSRSP Trigger: GGGCGATCTGGAGGGTGGCAAGTCCCTGAGCGGGCT...TGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS GCA 90 bp | TGGCAACAGGGCTGTGTATCTGAGTTGAGTGCCGTGACTGAGACTTaGCATCGACTCTCCAGCTCAGGCCCCGAAGGCCGTTGTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WQQGCVSELSAVTET*HRLSSSGPEGRCPS Trigger: GCTGGGACAACGGCCTTCGGGGCCTGAGCTGGAGAGTCGATGGCAAGTCTCAGTCACGGCACTCAACTCAGATACACAGCCCTGTTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000093270.6 ENSMUST00000159081.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCACTTCCGGATAGAGTaGGCTGTGCAGCAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFTSNAPSSSLQLGCLHHFRIE*AVQQLL Trigger: GAGGAGCTGCTGCACAGCCAACTCTATCCGGAAGTG...ATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
||
| CDS GCA 90 bp | TCGACTCTCCAGCTCAGGCCCCGAAGGCCGTTGTCCCAGCGGCTCTaGTTCATGAGACTCTCTCGGATTTTTATCTTGTGGCTCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: STLQLRPRRPLSQRL*FMRLSRIFILWLFQ Trigger: TTGGAAGAGCCACAAGATAAAAATCCGAGAGAGTCTCATGAAGCAGAGCCGCTGGGACAACGGCCTTCGGGGCCTGAGCTGGAGAGTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000093270.6 ENSMUST00000159081.8 |
||
| CDS-3UTR CAA 90 bp | TTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCCTGGCTGTGTATCTGAGTaGAGTGCCGTGACTGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FTSNAPSSSLQLGCLHQPGCVSE*SAVTET Trigger: AGTCTCAGTCACGGCACTCAACTCAGATACACAGCC...AGGCTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATGGCTGTGTATCTGAGTaGAGTGCCGTGACTGAGACT | + |
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Preference number: 5 (lower is better) Translates to: SSFTSNAPSSSLQLGCLHGCVSE*SAVTET Trigger: AGTCTCAGTCACGGCACTCAACTCAGATACACAGCC...ATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | TCCTGCATGCCCTTGTACAAGTCTACTGCCTATCTATCCAGATGTTTCCTCATTAGCCCGCTCAGGGACTaGCCACCCTCCAGATCGCCC | + |
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Preference number: 5 (lower is better) Translates to: SCMPLYKSTAYLSRCFLISPLRD*PPSRSP Trigger: GGGCGATCTGGAGGGTGGCAAGTCCCTGAGCGGGCT...AATGAGGAAACATCTGGATAGATAGGCAGTAGACTTGTACAAGGGCATGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTGTGAGCAGCACTTCCGGATAGAGTaGGCTGTGCAGCAGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HQWANRTFKGSVEKVCEQHFRIE*AVQQLL Trigger: GAGGAGCTGCTGCACAGCCAACTCTATCCGGAAGTG...CTGCTCACAGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATGCCTGCATCAGCCTGTaGATACTCTCTTCTACCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSFTSNAPSSSLQLGCLHACISL*ILSSTS Trigger: AGAGGTAGAAGAGAGTATCAACAGGCTGATGCAGGC...ATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | GGTCAGTGGAGAAAGTCTGTGAGCAGCTTCACTTCAAACGCCCCTTCCTCCAGCACTGGTGATGCCACCTaGCTTTTTGGTTTGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GQWRKSVSSFTSNAPSSSTGDAT*LFGLSS Trigger: ACTGCTCAAACCAAAAAGCAAGGTGGCATCACCAGT...GCTGGAGGAAGGGGCGTTTGAAGTGAAGCTGCTCACAGACTTTCTCCACTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | AACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCCTATTGATACTTGGCTCTTCCAAAACTaGGAGATGACTGCAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: NAPSSSLQLGCLHQPIDTWLFQN*EMTAAC Trigger: GCAAGCTGCAGTCATCTCCAAGTTTTGGAAGAGCCA...AGTATCAATAGGCTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | AACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCCTATTGATACTACTGGTGATGCCACCTaGCTTTTTGGTTTGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: NAPSSSLQLGCLHQPIDTTGDAT*LFGLSS Trigger: ACTGCTCAAACCAAAAAGCAAGGTGGCATCACCAGT...AGTATCAATAGGCTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | AAGGCTCACTGCCAAAGGGAATCTGCTAAAGGGAGTCCACCATTTTGCTCCAAGGCCTGCATCAGCCTGTaGATACTCTCTTCTACCTCT | + |
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Preference number: 5 (lower is better) Translates to: KAHCQRESAKGSPPFCSKACISL*ILSSTS Trigger: AGAGGTAGAAGAGAGTATCAACAGGCTGATGCAGGC...CTTGGAGCAAAATGGTGGACTCCCTTTAGCAGATTCCCTTTGGCAGTGAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | ACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCCTATTAATGCCTCTAACTGGTaGAAATCCATGTCTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: TSNAPSSSLQLGCLHQPINASNW*KSMSAD Trigger: ATCTGCAGACATGGATTTCAACCAGTTAGAGGCATT...AATAGGCTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | AGCTTCACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCAGCTTCTTCAGGATTaGCTTGACTTTAACTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SFTSNAPSSSLQLGCLHQQLLQD*LDFNFI Trigger: GATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCTG...CTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS TCA 90 bp | ATGACTGCAGCTTGCTCACTGGTGATGCCACCTTGCTTTTTGGTTTaGGCAGTCAGGAATGCCTCTAACTGGTTGAAATCCATGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: MTAACSLVMPPCFLV*AVRNASNWLKSMSA Trigger: TGCAGACATGGATTTCAACCAGTTAGAGGCATTCCTGACTGCTCAAACCAAAAAGCAAGGTGGCATCACCAGTGAGCAAGCTGCAGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000093270.6 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTGTGAGCAGAATGCCTCTAACTGGTaGAAATCCATGTCTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: HQWANRTFKGSVEKVCEQNASNW*KSMSAD Trigger: ATCTGCAGACATGGATTTCAACCAGTTAGAGGCATT...CTGCTCACAGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | ACTTCAAACGCCCCTTCCTCCAGCCTTCAGTTAGGCTGCCTGCATCAGCCTATTCAGCTTCTTCAGGATTaGCTTGACTTTAACTTCATC | + |
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Preference number: 5 (lower is better) Translates to: TSNAPSSSLQLGCLHQPIQLLQD*LDFNFI Trigger: GATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCTG...AATAGGCTGATGCAGGCAGCCTAACTGAAGGCTGGAGGAAGGGGCGTTTGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | TATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGGCCTGCATCAGCCTGTaGATACTCTCTTCTACCTCT | + |
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Preference number: 5 (lower is better) Translates to: YTMSFGNTSGQTGLSKGQACISL*ILSSTS Trigger: AGAGGTAGAAGAGAGTATCAACAGGCTGATGCAGGC...CTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTCGGATTTTTATCTaGTGGCTCTTCCAAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: SFGNTSGQTGLSKGQWRKSRIFI*WLFQNL Trigger: CAAGTTTTGGAAGAGCCACAAGATAAAAATCCGAGA...CTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057843.12 ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | TTTGGTAACACCAGTGGGCAAACAGGACTTTCAAAGGGTCAGTGGAGAAAGTCTAAAAATTCAGATTCCTaGAGAAGTCCTCTCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: FGNTSGQTGLSKGQWRKSKNSDS*RSPLIF Trigger: GAAGATGAGAGGACTTCTCAAGGAATCTGAATTTTT...AGACTTTCTCCACTGACCCTTTGAAAGTCCTGTTTGCCCACTGGTGTTACCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071068.9 |
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| CDS-3UTR CAA 90 bp | AGACTTTCATGCATGTATACAATGTCTTTTGGTAACACCAGTGGGCAAACAGGAGCAGATGCAATAGACTaGAGAAGTCCTCTCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: RLSCMYTMSFGNTSGQTGADAID*RSPLIF Trigger: GAAGATGAGAGGACTTCTCAAGTCTATTGCATCTGC...TCCTGTTTGCCCACTGGTGTTACCAAAAGACATTGTATACATGCATGAAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGAAACACTCTTATCCTCCATTTCACAGCAGGACACTTTATCCAATTCTCTCGGATTTTTATCTaGTGGCTCTTCCAAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: IQRNTLILHFTAGHFIQFSRIFI*WLFQNL Trigger: CAAGTTTTGGAAGAGCCACAAGATAAAAATCCGAGA...GAATTGGATAAAGTGTCCTGCTGTGAAATGGAGGATAAGAGTGTTTCTTTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGAAACACTCTTATCCTCCATTTCACAGCAGGACACTTTATCCAATTCCAGCTTCTTCAGGATTaGCTTGACTTTAACTTCATC | + |
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Preference number: 5 (lower is better) Translates to: IQRNTLILHFTAGHFIQFQLLQD*LDFNFI Trigger: GATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCTG...GAATTGGATAAAGTGTCCTGCTGTGAAATGGAGGATAAGAGTGTTTCTTTGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159081.8 |
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| CDS GCA 90 bp | AGCCTGTTGATACTCTCTTCTACCTCTGACAGCTTCTTCAGGATTTaGTTGACTTTAACTTCATCAAATTCCAGACACAAAAATTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SLLILSSTSDSFFRI*LTLTSSNSRHKNSD Trigger: ATCTGAATTTTTGTGTCTGGAATTTGATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCTGTCAGAGGTAGAAGAGAGTATCAACAGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS TCA 72 bp | CTGTGCAGCAGCTCCTCCGTGACACCCGAGTGTCCGTaGAAGGCGTTCTGCGCTAGGCCGCTCAGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LCSSSSVTPECP*KAFCARPLSSP Trigger: CGGGCTGCTGAGCGGCCTAGCGCAGAACGCCTTTCACGGACACTCGGGTGTCACGGAGGAGCTGCTGCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS CAA 90 bp | CGCCAGGAAGGGGCGGAACTCCTCCGGTGGCACTTCCGGATAGAGTaGGCTGTGCAGCAGCTCCTCCGTGACACCCGAGTGTCCGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RQEGAELLRWHFRIE*AVQQLLRDTRVSVK Trigger: TTTCACGGACACTCGGGTGTCACGGAGGAGCTGCTGCACAGCCAACTCTATCCGGAAGTGCCACCGGAGGAGTTCCGCCCCTTCCTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071068.9 ENSMUST00000159081.8 |
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| CDS CCA 72 bp | TCTCATCTTCGCCAGGAAGGGGCGGAACTCCTCCGGTaGCACTTCCGGATAGAGTTGGCTGTGCAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SHLRQEGAELLR*HFRIELAVQQL Trigger: GAGCTGCTGCACAGCCAACTCTATCCGGAAGTGCCACCGGAGGAGTTCCGCCCCTTCCTGGCGAAGATGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071068.9 ENSMUST00000093270.6 ENSMUST00000159081.8 |
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| CDS CCA 72 bp | GAATTCTGGCTCCAGTCCCCGGGGTCCTCCACACTCTaGTATGATGCAAGCACCCAACATGGGAGACACCTC | + |
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Preference number: 6 (lower is better) Translates to: EFWLQSPGSSTL*YDASTQHGRHL Trigger: GAGGTGTCTCCCATGTTGGGTGCTTGCATCATACCAGAGTGTGGAGGACCCCGGGGACTGGAGCCAGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
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| CDS TCA 72 bp | GGCCCCGAAGGCCGTTGTCCCAGCGGCTCTGCTTCATaGGACTCTCTCGGATTTTTATCTTGTGGCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPEGRCPSGSAS*DSLGFLSCGSS Trigger: GGAAGAGCCACAAGATAAAAATCCGAGAGAGTCTCATGAAGCAGAGCCGCTGGGACAACGGCCTTCGGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000093270.6 ENSMUST00000159081.8 |
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| CDS CAA 72 bp | AACTGGTTGAAATCCATGTCTGCAGATGCAATAGACTaGAGAAGTCCTCTCATCTTCGCCAGGAAGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: NWLKSMSADAID*RSPLIFARKGR Trigger: CCGCCCCTTCCTGGCGAAGATGAGAGGACTTCTCAAGTCTATTGCATCTGCAGACATGGATTTCAACCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093270.6 ENSMUST00000159081.8 |
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| CDS CCA 72 bp | AAATCCATGTCTGCAGATGCAATAGACAGCAGTTCTTaGATTTCTACCATGACGTGCTGCCGGAGTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: KSMSADAIDSSS*ISTMTCCRSSR Trigger: TCTTGAACTCCGGCAGCACGTCATGGTAGAAATCCAAGAACTGCTGTCTATTGCATCTGCAGACATGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057843.12 |
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| CDS GCA 72 bp | ATACTCTCTTCTACCTCTGACAGCTTCTTCAGGATTTaGTTGACTTTAACTTCATCAAATTCCAGACACAAA | + |
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Preference number: 6 (lower is better) Translates to: ILSSTSDSFFRI*LTLTSSNSRHK Trigger: TTTGTGTCTGGAATTTGATGAAGTTAAAGTCAAGCAAATCCTGAAGAAGCTGTCAGAGGTAGAAGAGAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057843.12 ENSMUST00000071068.9 ENSMUST00000159081.8 |
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