Pregenerated sensors for COLQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057606Ensembl transcript IDs: ENSMUST00000112027.9, ENSMUST00000124014.8, ENSMUST00000150054.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTGCACCAAGAGAATATaGTCACCTCCTGCTTTGTGGTTCTCAAATCTTGAGAGGCCCAAC | + |
|
Preference number: 1 (lower is better) Translates to: GSLSRSEAGSCTKRI*SPPALWFSNLERPN Trigger: GTTGGGCCTCTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 90 bp | CCACCCAGAAGCCCCGGAAGAGGAAGCAGGATAGATGTCTGCCTGTaGAGACAGCCTCAGGCTGATTTCTCTCACGAACTACAGTTCACA | + |
|
Preference number: 1 (lower is better) Translates to: PPRSPGRGSRIDVCL*RQPQADFSHELQFT Trigger: TGTGAACTGTAGTTCGTGAGAGAAATCAGCCTGAGGCTGTCTTCACAGGCAGACATCTATCCTGCTTCCTCTTCCGGGGCTTCTGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| 3UTR GCA 90 bp | CTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTaGACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: LWPVEGSLSRSEAGS*TKRICSPPALWFSN Trigger: ATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR GCA 90 bp | TCTCACGAACTACAGTTCACAGCTCGGACTTGCTGTGTGAGAAGGTaGCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: SHELQFTARTCCVRR*RLLSSQDLGSLKSF Trigger: GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCACACAGCAAGTCCGAGCTGTGAACTGTAGTTCGTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 90 bp | AAGAGGAAGCAGGATAGATGTCTGCCTGTGAAGACAGCCTCAGGCTaGTTTCTCTCACGAACTACAGTTCACAGCTCGGACTTGCTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: KRKQDRCLPVKTASG*FLSRTTVHSSDLLC Trigger: ACACAGCAAGTCCGAGCTGTGAACTGTAGTTCGTGAGAGAAATCAGCCTGAGGCTGTCTTCACAGGCAGACATCTATCCTGCTTCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| 3UTR-3UTR GCA 90 bp | ACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCTCCCACACAGGACAAGGTGCAGAAGCCTGTaGAGGAGCACCCCTAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: TPARALGRACGVSLPHRTRCRSL*RSTPKP Trigger: AGGTTTAGGGGTGCTCCTGCACAGGCTTCTGCACCT...TGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAAGGAGGGCGTGTGGGGTaGGTCTCCCACACAGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: GGVQVVHGRGLQGPALSQGGRVG*VSHTGH Trigger: GTGTCCTGTGTGGGAGACTCACCCCACACGCCCTCC...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTGCCCACCCAGAAGCCCCGGAAGAGGAAGCAGGATAGATGTCTGCCTGTGGGAAACACCAGCACGTaGCCTGGGGAGGGCGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLPTQKPRKRKQDRCLPVGNTST*PGEGVW Trigger: CCACACGCCCTCCCCAGGGCACGTGCTGGTGTTTCC...CACAGGCAGACATCTATCCTGCTTCCTCTTCCGGGGCTTCTGGGTGGGCAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| 3UTR CAA 90 bp | GCCCTGGGGAGGGCGTGTGGGGTGAGTCTCCCACACAGGACACAGTaGTGGAGGGCACTGTCAAGACAGAGGTCAAGATGCAGAGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: ALGRACGVSLPHRTQ*WRALSRQRSRCREN Trigger: GTTCTCTCTGCATCTTGACCTCTGTCTTGACAGTGCCCTCCACAACTGTGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAACCTGGGGAGGGCGTGTaGGGTGAGTCTCCCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQPGEGV*GESPTQ Trigger: CTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGG...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCTCCCACACAGGACACCTTGTTTTGTCACATaGAGGTTAACAGGCACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: TPARALGRACGVSLPHRTPCFVT*RLTGTV Trigger: GACAGTGCCTGTTAACCTTCATGTGACAAAACAAGG...TGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CAA 90 bp | TGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAACAAGGACTaGGCCGTGGAGCCCCAAACCAGAGAAACCAGCGTGAGGAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: CMEEGYKVLPSANKD*AVEPQTRETSVRKH Trigger: GTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGGCTCCACGGCCAAGTCCTTGTTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAAGTCCCTCAGCAGGTCTaGAGCTGGGAGCTGCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQVPQQV*SWELHQ Trigger: TTGGTGCAGCTCCCAGCTTCAGACCTGCTGAGGGAC...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCGGGGTCACACACAAGTaGCTCAGCCGAGTCTTCACC | + |
|
Preference number: 2 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFGVTHK*LSRVFT Trigger: GGTGAAGACTCGGCTGAGTCACTTGTGTGTGACCCC...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAAAGGTGCAGAAGCCTGTaGAGGAGCACCCCTAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: GGVQVVHGRGLQGPALSQRCRSL*RSTPKP Trigger: AGGTTTAGGGGTGCTCCTGCACAGGCTTCTGCACCT...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCCTGGGGAGGGTCTGAAGCTGGGAGCTaGACCAAGAGAATATGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PQTRETSVRKHQHVPWGGSEAGS*TKRICS Trigger: TGAGCATATTCTCTTGGTGCAGCTCCCAGCTTCAGA...CCCTCCCCAGGGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCCGTGGAGCCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCAGACAGAGGTCAAGATaGAGAGAGAACCACAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GRGAPNQRNQREETPARARQRSR*RENHKV Trigger: GACCTTGTGGTTCTCTCTGCATCTTGACCTCTGTCT...GGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGGCTCCACGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGAAATTGATCCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGAGCTGTGCTTGGAGGTaGAGAAGCCTGTGCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HEIDPGSGQLKGPSAGLKSCAWR*RSLCRS Trigger: GCTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCT...CTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGGATCAATTTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAGATCAGCTGTGCTTaGAGGTGCAGAAGCCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFQISCA*RCRSLC Trigger: GCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTG...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAAGAGGCCCAACAGCCTTaGATCAGATCAGCTGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GGVQVVHGRGLQGPALSQEAQQP*IRSAVL Trigger: AAGCACAGCTGATCTGATCCAAGGCTGTTGGGCCTC...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAAAAGGCCAGCTTGATGTaGAGGGTAGAGAAACAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GGVQVVHGRGLQGPALSQKASLM*RVEKQP Trigger: TGGCTGTTTCTCTACCCTTCACATCAAGCTGGCCTT...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGAGAGAACCACAAGGTCAAGATGGCGCCCCTCAGAGAACTTCAAGAGGAGCAGATCAGCTGTGCTTaGAGGTGCAGAAGCCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: CRENHKVKMAPLRELQEEQISCA*RCRSLC Trigger: GCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTG...CTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCAAGGCCAGCTTGATGTaGAGGGTAGAGAAACAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFKASLM*RVEKQP Trigger: TGGCTGTTTCTCTACCCTTCACATCAAGCTGGCCTT...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTGCCCACCCAGAAGCCCCGGAAGAGGAAGCAGGATAGATGTCTGCCTGTGTGCACCAAGAGAATATaGTCACCTCCTGCTTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLPTQKPRKRKQDRCLPVCTKRI*SPPALW Trigger: CCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCA...CACAGGCAGACATCTATCCTGCTTCCTCTTCCGGGGCTTCTGGGTGGGCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAACCTTGTTTTGTCACATaGAGGTTAACAGGCACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GGVQVVHGRGLQGPALSQPCFVT*RLTGTV Trigger: GACAGTGCCTGTTAACCTTCATGTGACAAAACAAGG...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCTTGAGAGGCCCAGCTGTGCTTGGAGGTaGAGAAGCCTGTGCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TKRICSPPALWFSNLERPSCAWR*RSLCRS Trigger: GCTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCT...GGGCCTCTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CAA 90 bp | GCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCTaGAGAGGCCCAACAGCCTTGGATCAGATCAGCTGTGCTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: APREYAHLLLCGSQI*RGPTALDQISCAWR Trigger: CCTCCAAGCACAGCTGATCTGATCCAAGGCTGTTGGGCCTCTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCACGGTCTGAGCCAGCGTCTTTCCAGAAGAGATAAGGCATTACAGCCAGCTGAACAGTTTCCAGGGTaGGCATATAGAAGGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IHGLSQRLSRRDKALQPAEQFPG*AYRRFL Trigger: CAGAAACCTTCTATATGCCCACCCTGGAAACTGTTC...AGCTGGCTGTAATGCCTTATCTCTTCTGGAAAGACGCTGGCTCAGACCGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGAGAGAACCACAAGGTCAAGATGGCGCCCCTCAGAGAACTTCAAGAGGAGCTTTCTCAGTTCCTCTaGCTGATCAACATGAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: CRENHKVKMAPLRELQEELSQFL*LINMKL Trigger: CAATTTCATGTTGATCAGTCAGAGGAACTGAGAAAG...CTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCGAACAGTTTCCAGGGTaGGCATATAGAAGGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGAAPREYAHLLLCGSQIEQFPG*AYRRFL Trigger: CAGAAACCTTCTATATGCCCACCCTGGAAACTGTTC...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 72 bp | AAACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTaGGTCTCCCACACAGGACACAGTTGTGGAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KHQHVPWGGRVG*VSHTGHSCGGH Trigger: GTGCCCTCCACAACTGTGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 72 bp | GGCACTGTCCCGGGAGAGGGCAAGGCCAGCTTGATGTaGAGGGTAGAGAAACAGCCACCGGTTCCATGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: GTVPGEGKASLM*RVEKQPPVPWA Trigger: CGCCCATGGAACCGGTGGCTGTTTCTCTACCCTTCACATCAAGCTGGCCTTGCCCTCTCCCGGGACAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR GCA 72 bp | CTTGAGAGGCCCAACAGCCTTGGATCAGATCAGCTGTaGTTGGAGGTGCAGAAGCCTGTGCAGGAGCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LERPNSLGSDQL*LEVQKPVQEHP Trigger: GGGGTGCTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTTGGGCCTCTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR GCA 72 bp | GGGCACACAGTGAGGGAACAGGGGGTGTGCAAGTTGTaGATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GHTVREQGVCKL*MEEGYKVLPSA Trigger: GGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCCTGTTCCCTCACTGTGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTGCCCACCCAGAAGCCCCGGAAGAGGAAGCAGGATAGATGTCTGCCTGTGGTTCACAGCTCGGACTaGCTGTGTGAGAAGGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: CLPTQKPRKRKQDRCLPVVHSSD*LCEKVP Trigger: CGGCACCTTCTCACACAGCAAGTCCGAGCTGTGAAC...CACAGGCAGACATCTATCCTGCTTCCTCTTCCGGGGCTTCTGGGTGGGCAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| 3UTR GCA 72 bp | TGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTaGCCTCAGCCAACAAGGACTTGGCCGTGGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CASCAWKRVTRS*PQPTRTWPWSP Trigger: GGGGCTCCACGGCCAAGTCCTTGTTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAACCACACAGGACACAGTaGTGGAGGGCACTGTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGVQVVHGRGLQGPALSQPHRTQ*WRALSR Trigger: TCTTGACAGTGCCCTCCACAACTGTGTCCTGTGTGG...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CCA 72 bp | AGAGGCCCAACAGCCTTGGATCAGATCAGCTGTGCTTaGAGGTGCAGAAGCCTGTGCAGGAGCACCCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGPTALDQISCA*RCRSLCRSTPK Trigger: TTTAGGGGTGCTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTTGGGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCTCAGATCAGCTGTGCTaGGAGGTGCAGAAGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFSDQLC*EVQKPV Trigger: CACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGA...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR GCA 72 bp | GTTGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTaGACCAAGAGAATATGCTCACCTCCTGCTTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VEGSLSRSEAGS*TKRICSPPALW Trigger: CCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR GCA 72 bp | GAAGAGGTTGGGCACACAGTGAGGGAACAGGGGGTGTaGAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEVGHTVREQGV*KLCMEEGYKVL Trigger: CAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCCTGTTCCCTCACTGTGTGCCCAACCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGTGAGTCTCCCACACAGGACACAGTTGTGGAGGGCACTGTCAAGACAGAGCTGATCAACATGAAATaGATCCAGGCTCTGGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WGESPTQDTVVEGTVKTELINMK*IQALAS Trigger: ACTGGCCAGAGCCTGGATCAATTTCATGTTGATCAG...CTCTGTCTTGACAGTGCCCTCCACAACTGTGTCCTGTGTGGGAGACTCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 72 bp | TGCAGAAGCCTGTGCAGGAGCACCCCTAAACCTGAATaGGACCAGAACAAACCACACCAGGCCTGTAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: CRSLCRSTPKPE*DQNKPHQACRY Trigger: GTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTCATTCAGGTTTAGGGGTGCTCCTGCACAGGCTTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR GCA 72 bp | GATTTCTCTCACGAACTACAGTTCACAGCTCGGACTTaGTGTGTGAGAAGGTGCCGCCTGCTGAGTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DFSHELQFTART*CVRRCRLLSSQ Trigger: TTGGGAACTCAGCAGGCGGCACCTTCTCACACAGCAAGTCCGAGCTGTGAACTGTAGTTCGTGAGAGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGAAATTGATCCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGTGTGGTTCTCAAATCTaGAGAGGCCCAACAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HEIDPGSGQLKGPSAGLKCGSQI*RGPTAL Trigger: CAAGGCTGTTGGGCCTCTCAAGATTTGAGAACCACA...CTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGGATCAATTTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCTGCTCACCTCCTGCTTaGTGGTTCTCAAATCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFCSPPA*WFSNLE Trigger: CTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCA...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAATTCTTGGGACTAAGCTaGGATCTAGTGGCTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGVQVVHGRGLQGPALSQFLGLS*DLVAFS Trigger: TGAGAAAGCCACTAGATCCAAGCTTAGTCCCAAGAA...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAAGTCTTCACCCTCTTCTaGGGACTAAGCTTGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQVFTLF*GLSLDL Trigger: TAGATCCAAGCTTAGTCCCAAGAAGAGGGTGAAGAC...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 72 bp | CAGGATAGATGTCTGCCTGTGAAGACAGCCTCAGGCTaGTTTCTCTCACGAACTACAGTTCACAGCTCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QDRCLPVKTASG*FLSRTTVHSSD Trigger: GTCCGAGCTGTGAACTGTAGTTCGTGAGAGAAATCAGCCTGAGGCTGTCTTCACAGGCAGACATCTATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| 3UTR CCA 72 bp | AGAGGTCAAGATGCAGAGAGAACCACAAGGTCAAGATaGCGCCCCTCAGAGAACTTCAAGAGGAGGAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RGQDAERTTRSR*RPSENFKRRKV Trigger: GACTTTCCTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCATCTTGACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 72 bp | GTCGTAGCAGCAAGAATATATCCTTGTTTTGTCACATaGAGGTTAACAGGCACTGTCCCGGGAGAGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VVAARIYPCFVT*RLTGTVPGEGK Trigger: CTTGCCCTCTCCCGGGACAGTGCCTGTTAACCTTCATGTGACAAAACAAGGATATATTCTTGCTGCTACGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR TCA 72 bp | AATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCTTaGGAGGCCCAACAGCCTTGGATCAGATCAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NMLTSCFVVLKS*EAQQPWIRSAV Trigger: CACAGCTGATCTGATCCAAGGCTGTTGGGCCTCTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGCTTGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGATCAACATGAAATTTGTGGTTCTCAAATCTaGAGAGGCCCAACAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLDLVAFSVPLTDQHEICGSQI*RGPTAL Trigger: CAAGGCTGTTGGGCCTCTCAAGATTTGAGAACCACA...AATTTCATGTTGATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGATCAACATGAAATTGATTGCTCACCTCCTGCTTaGTGGTTCTCAAATCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLDLVAFSVPLTDQHEIDCSPPA*WFSNLE Trigger: CTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCA...ATCAATTTCATGTTGATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | ACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCTCCCACACAGGACACACTCTTCCCCAGGCTaGAGGACTCCATCCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPARALGRACGVSLPHRTHSSPG*RTPSPQ Trigger: CTGCGGGGATGGAGTCCTGCAGCCTGGGGAAGAGTG...TGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AACCAGCGTGAGGAAACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTTGCAGATGGTGGGCCTaGGGGCCCTGGAGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQREETPARALGRACGVSCRWWA*GPWRTL Trigger: CAAGGTCCTCCAGGGCCCCCAGGCCCACCATCTGCA...ACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGTTTCCTCACGCTGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCCTGGGGAGGGGGCTCCGGCTGCCTCTaGAGAACGGCGGTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQTRETSVRKHQHVPWGGGSGCL*RTAVGR Trigger: TCTTCCCACCGCCGTTCTTCAGAGGCAGCCGGAGCC...CCCTCCCCAGGGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTGCAGGGGCGGTGGGGGCATaGGTAGGCAGCATGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSGQLKGPSAGLKLGAAGAVGA*VGSMLC Trigger: ACAAAGCATGCTGCCTACTCATGCCCCCACCGCCCC...TGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | GGCCGTGGAGCCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCGGGGCGGTGGGGGCATaGGTAGGCAGCATGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGAPNQRNQREETPARAGAVGA*VGSMLC Trigger: ACAAAGCATGCTGCCTACTCATGCCCCCACCGCCCC...GGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGGCTCCACGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCCTGGGGAGGGTCTGAAGAACGGCGGTaGGAAGAGTGGGGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQTRETSVRKHQHVPWGGSEERR*EEWGRW Trigger: CCACCGCCCCCACTCTTCCCACCGCCGTTCTTCAGA...CCCTCCCCAGGGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | ACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCTCCCACACAGGACACATGCCAGGAACACCTaGGGGTCCAGGTCTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPARALGRACGVSLPHRTHARNT*GSRSTL Trigger: AAGGGTAGACCTGGACCCCCAGGTGTTCCTGGCATG...TGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | ACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCTCCCACACAGGACACCCAGGCTTGCCTGGTaGGCCCATAATTCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPARALGRACGVSLPHRTPRLAW*AHNSTV Trigger: GACAGTGGAATTATGGGCCCACCAGGCAAGCCTGGG...TGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAGCTTGATGTGAAGGGTAGAGAAACAGCCACCGGTTCCATGGGCGGCAGCCACTCTTCCCCAGGCTaGAGGACTCCATCCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLDVKGRETATGSMGGSHSSPG*RTPSPQ Trigger: CTGCGGGGATGGAGTCCTGCAGCCTGGGGAAGAGTG...GCTGCCGCCCATGGAACCGGTGGCTGTTTCTCTACCCTTCACATCAAGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGAGAACCACAAGGTCAAGATGGCGCCCCTCAGAGAACTTCAAGAGGAGAGCCCAGGTGGACCCTaGGGCCCAGGGGGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRENHKVKMAPLRELQEESPGGP*GPGGPG Trigger: TCCTGGGCCCCCTGGGCCCCAGGGTCCACCTGGGCT...CTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCCTGGGGAGGGAGCCACGCCCATACATaGAGTCCCCGTAGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTRETSVRKHQHVPWGGSHAHT*SPRRRG Trigger: ACCCCTCCTACGGGGACTCCATGTATGGGCGTGGCT...CCCTCCCCAGGGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTGCAGCCAGGAAGGGCTGCTaGGATTGGGACCACACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGSGQLKGPSAGLKLGAAARKGC*DWDHTV Trigger: AACAGTGTGGTCCCAATCTCAGCAGCCCTTCCTGGC...TGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGAGAACCACAAGGTCAAGATGGCGCCCCTCAGAGAACTTCAAGAGGAGTGGGCCTGGGGGCCCTaGAGGACCTTGACGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRENHKVKMAPLRELQEEWAWGP*RTLTAR Trigger: CCTGGCCGTCAAGGTCCTCCAGGGCCCCCAGGCCCA...CTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GGCCGTGGAGCCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCAGGGTGTGGAGTCGATaGAGCAGTACTGGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GRGAPNQRNQREETPARARVWSR*SSTGCT Trigger: GGTGCACCCAGTACTGCTCCATCGACTCCACACCCT...GGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGGCTCCACGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCAGAAGCCTGTGCAGGAGGGGGCCTCGGTGTCCTaGCAGCCCAGACTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSLGSDQLCLEVQKPVQEGASVS*QPRLSL Trigger: AAGGGAGAGTCTGGGCTGGCAGGACACCGAGGCCCC...CTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AACCAGCGTGAGGAAACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NQREETPARALGRACGVSPLFSL*SCLARK Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...ACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGTTTCCTCACGCTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGATAAGGCATTACAGCCAGCTGTTTAGCCAGATTCGGGGAGGGGGAACAGGGTCCTTCAGGGCCTaGCCAGCCAACGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEIRHYSQLFSQIRGGGTGSFRA*PANGPR Trigger: CCTGGGCCCGTTGGCTGGCCAGGCCCTGAAGGACCC...TGTTCCCCCTCCCCGAATCTGGCTAAACAGCTGGCTGTAATGCCTTATCTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGAGAGAACCACAAGGTCAAGATGGCGCCCCTCAGAGAACTTCAAGAGGAGCTGCCCCGCTTCTTCTaGTCCAGGCCAGGAAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRENHKVKMAPLRELQEELPRFF*SRPGRA Trigger: GGCCCTTCCTGGCCTGGATCAGAAGAAGCGGGGCAG...CTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTAGCCCAGGTGGACCCTaGGGCCCAGGGGGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSASPGGP*GPGGPG Trigger: TCCTGGGCCCCCTGGGCCCCAGGGTCCACCTGGGCT...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCCCACCCAGAAGCCCCGGAAGAGGAAGCAGGATAGATGTCTGCCTGTGCACCTTTTTCACCCCTaGGTCCTTCAGGGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPTQKPRKRKQDRCLPVHLFHP*VLQGLA Trigger: GGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTG...CACAGGCAGACATCTATCCTGCTTCCTCTTCCGGGGCTTCTGGGTGGGCAAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS-3UTR CCA 90 bp | GGCCAGCTTGATGTGAAGGGTAGAGAAACAGCCACCGGTTCCATGGGCGGCAGCAGTAGCGGCAGGGTGTaGAGTCGATGGAGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GQLDVKGRETATGSMGGSSSGRV*SRWSST Trigger: AGTACTGCTCCATCGACTCCACACCCTGCCGCTACT...GCTGCCGCCCATGGAACCGGTGGCTGTTTCTCTACCCTTCACATCAAGCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAACTGCCCCGCTTCTTCTaGTCCAGGCCAGGAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQLPRFF*SRPGRA Trigger: AGCCCTTCCTGGCCTGGATCAGAAGAAGCGGGGCAG...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTGCAAAGGCAATGGCATTCTaGGTGTTCAGCCTCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSGQLKGPSAGLKLGAAKAMAF*VFSLSS Trigger: GCTTGAGAGGCTGAACACTCAGAATGCCATTGCCTT...TGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | ACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCTCCCACACAGGACAAGCCAAGGCTATCTTTaGAGTACAAAGATCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPARALGRACGVSLPHRTSQGYL*STKIAG Trigger: ACCAGCGATCTTTGTACTTCAAAGATAGCCTTGGCT...TGTCCTGTGTGGGAGACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | CATGAAATTGATCCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGCTCCATCCCCGCAGGTaGCAGGCTGCTTCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HEIDPGSGQLKGPSAGLKLHPRR*QAASRC Trigger: ACACCGTGAAGCAGCCTGGCACCTGCGGGGATGGAG...CTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGGATCAATTTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTGGGTCCTTCAGGGCCTaGCCAGCCAACGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSAGSFRA*PANGPR Trigger: CCTGGGCCCGTTGGCTGGCCAGGCCCTGAAGGACCC...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCTTGAGAGGCCCTGGGCCTGGGGGCCCTaGAGGACCTTGACGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKRICSPPALWFSNLERPWAWGP*RTLTAR Trigger: CCTGGCCGTCAAGGTCCTCCAGGGCCCCCAGGCCCA...GGGCCTCTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGATAAGGCATTACAGCCAGCTGTTTAGCCAGATTCGGGGAGGGGGAACATGCAGATGGTGGGCCTaGGGGCCCTGGAGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEIRHYSQLFSQIRGGGTCRWWA*GPWRTL Trigger: CAAGGTCCTCCAGGGCCCCCAGGCCCACCATCTGCA...TGTTCCCCCTCCCCGAATCTGGCTAAACAGCTGGCTGTAATGCCTTATCTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AACCAGCGTGAGGAAACACCAGCACGTGCCCTGGGGAGGGCGTGTGGGGTGAGTCTCTTCGAAAGGCAATaGCATTCTGAGTGTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NQREETPARALGRACGVSLFERQ*HSECSA Trigger: GGCTGAACACTCAGAATGCCATTGCCTTTCGAAGAG...ACTCACCCCACACGCCCTCCCCAGGGCACGTGCTGGTGTTTCCTCACGCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CAA 72 bp | AGGGCGTGTGGGGTGAGTCTCCCACACAGGACACAGTaGTGGAGGGCACTGTCAAGACAGAGGTCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RACGVSLPHRTQ*WRALSRQRSRC Trigger: GCATCTTGACCTCTGTCTTGACAGTGCCCTCCACAACTGTGTCCTGTGTGGGAGACTCACCCCACACGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCGGCTCCGGCTGCCTCTaGAGAACGGCGGTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGAAPREYAHLLLCGSQIGSGCL*RTAVGR Trigger: TCTTCCCACCGCCGTTCTTCAGAGGCAGCCGGAGCC...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTGCAATGATGAGGAGAAGATaGGTGAATGATGGACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSGQLKGPSAGLKLGAAMMRRR*VNDGPV Trigger: GACGGGTCCATCATTCACTCATCTTCTCCTCATCAT...TGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCAGAAGCCTGTGCAGGAGCCTTTGGTCCTGTCTTaGCAGGAAGCCCAGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSLGSDQLCLEVQKPVQEPLVLS*QEAQVD Trigger: GTCCACCTGGGCTTCCTGGCAAGACAGGACCAAAGG...CTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGAGAACCACAAGGTCAAGATGGCGCCCCTCAGAGAACTTCAAGAGGAGTTCCTGGTCTTCCTGTaGGGCCTCGGTGTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRENHKVKMAPLRELQEEFLVFL*GLGVLP Trigger: TGGCAGGACACCGAGGCCCCACAGGAAGACCAGGAA...CTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCTTGCCTCGTTTTCCTaGTCTTCCTGTGGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFLASFS*SSCGAS Trigger: CGAGGCCCCACAGGAAGACCAGGAAAACGAGGCAAG...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CAA 72 bp | GTTGGGCACACAGTGAGGGAACAGGGGGTGTGCAAGTaGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGHTVREQGVCK*CMEEGYKVLPS Trigger: TGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCCTGTTCCCTCACTGTGTGCCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCCTCCATCCCCGCAGGTaGCAGGCTGCTTCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGAAPREYAHLLLCGSQILHPRR*QAASRC Trigger: ACACCGTGAAGCAGCCTGGCACCTGCGGGGATGGAG...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAGCTTGATGTGAAGGGTAGAGAAACAGCCACCGGTTCCATGGGCGGCAGCTTGGCTGAGACACGATaGAGCAGAAGAAGAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQLDVKGRETATGSMGGSLAETR*SRRRVG Trigger: TCCAACTCTTCTTCTGCTCCATCGTGTCTCAGCCAA...GCTGCCGCCCATGGAACCGGTGGCTGTTTCTCTACCCTTCACATCAAGCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGAGTCTCCCACACAGGACACAGTTGTGGAGGGCACTGTCAAGACAGAGCCCCTTTTCTCCCTTTaGTCCTGTCTTGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WGESPTQDTVVEGTVKTEPLFSL*SCLARK Trigger: CTTCCTGGCAAGACAGGACCAAAGGGAGAAAAGGGG...CTCTGTCTTGACAGTGCCCTCCACAACTGTGTCCTGTGTGGGAGACTCACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAACATGCCAGGAACACCTaGGGGTCCAGGTCTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQHARNT*GSRSTL Trigger: AAGGGTAGACCTGGACCCCCAGGTGTTCCTGGCATG...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGATAAGGCATTACAGCCAGCTGTTTAGCCAGATTCGGGGAGGGGGAACACCTTTGGTCCTGTCTTaGCAGGAAGCCCAGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EEIRHYSQLFSQIRGGGTPLVLS*QEAQVD Trigger: GTCCACCTGGGCTTCCTGGCAAGACAGGACCAAAGG...TGTTCCCCCTCCCCGAATCTGGCTAAACAGCTGGCTGTAATGCCTTATCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTTCTGAAGAACGGCGGTaGGAAGAGTGGGGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSASEERR*EEWGRW Trigger: CCACCGCCCCCACTCTTCCCACCGCCGTTCTTCAGA...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAAAAGGTTCTTCATGTCTaGGGAGAGAAGCGGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQKVLHV*GEKRAP Trigger: CGGAGCCCGCTTCTCTCCCCAGACATGAAGAACCTT...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACGGTCTGAGCCAGCGTCTTTCCAGAAGAGATAAGGCATTACAGCCAGCTAGGCCCAGGCTTGCCTaGTGGGCCCATAATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IHGLSQRLSRRDKALQPARPRLA*WAHNST Trigger: AGTGGAATTATGGGCCCACCAGGCAAGCCTGGGCCT...AGCTGGCTGTAATGCCTTATCTCTTCTGGAAAGACGCTGGCTCAGACCGTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAACCTTCTGACCCTGCTTaGCTCGTTTTCCTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQPSDPA*LVFLVF Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGTCAGAAGG...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCTTGAGAGGCCCTCTACCCTTCCTTCCTaGGCGGCCAAGGTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKRICSPPALWFSNLERPSTLPS*AAKVPL Trigger: AAGGGGGACCTTGGCCGCCCAGGAAGGAAGGGTAGA...GGGCCTCTCAAGATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTCACCTTTTTCACCCCTaGGTCCTTCAGGGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSAHLFHP*VLQGLA Trigger: GGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTG...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCCTTGCCTCGTTTTCCTaGTCTTCCTGTGGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGAAPREYAHLLLCGSQILASFS*SSCGAS Trigger: CGAGGCCCCACAGGAAGACCAGGAAAACGAGGCAAG...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCCCCAGGCTTGCCTGGTaGGCCCATAATTCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGAAPREYAHLLLCGSQIPRLAW*AHNSTV Trigger: GACAGTGGAATTATGGGCCCACCAGGCAAGCCTGGG...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCTCTTCCTGGAGGCCCTaGAAATCCTCTTTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFSSWRP*KSSFPF Trigger: AAAGGGGAAAGAGGATTTCCAGGGCCTCCAGGAAGA...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTAGCCACGCCCATACATaGAGTCCCCGTAGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSASHAHT*SPRRRG Trigger: ACCCCTCCTACGGGGACTCCATGTATGGGCGTGGCT...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CAA 72 bp | ACTGATCAACATGAAATTGATCCAGGCTCTGGCCAGTaGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDQHEIDPGSGQ*KGPSAGLKLGA Trigger: AGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGGATCAATTTCATGTTGATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | ATCCACGGTCTGAGCCAGCGTCTTTCCAGAAGAGATAAGGCATTACAGCCAGCTAGCATGCTTTGTGGCTaGCCCGCTTCTTCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHGLSQRLSRRDKALQPASMLCG*PASSDP Trigger: TGGATCAGAAGAAGCGGGGCAGCCACAAAGCATGCT...AGCTGGCTGTAATGCCTTATCTCTTCTGGAAAGACGCTGGCTCAGACCGTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGATAAGGCATTACAGCCAGCTGTTTAGCCAGATTCGGGGAGGGGGAACACCTTCTGACCCTGCTTaGCTCGTTTTCCTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEIRHYSQLFSQIRGGGTPSDPA*LVFLVF Trigger: GAAGACCAGGAAAACGAGGCAAGCAGGGTCAGAAGG...TGTTCCCCCTCCCCGAATCTGGCTAAACAGCTGGCTGTAATGCCTTATCTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGTGCAAGTTGTGCATGGAAGAGGGTTACAAGGTCCTGCCCTCAGCCAAACTGTTGATGAAAGTTaGCTGAGACACGATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGVQVVHGRGLQGPALSQTVDES*LRHDGA Trigger: TGCTCCATCGTGTCTCAGCCAACTTTCATCAACAGT...TTGGCTGAGGGCAGGACCTTGTAACCCTCTTCCATGCACAACTTGCACACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCAACCCTTTTCTCCTTTaGGACCCAAGTCACCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFNPFLL*DPSHPF Trigger: AAAGGGGTGACTTGGGTCCCAAAGGAGAAAAGGGTT...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTAGGCCCAGGCTTGCCTaGTGGGCCCATAATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSARPRLA*WAHNST Trigger: AGTGGAATTATGGGCCCACCAGGCAAGCCTGGGCCT...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAATCTTCCTGGAGGCCCTaGAAATCCTCTTTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQSSWRP*KSSFPF Trigger: AAAGGGGAAAGAGGATTTCCAGGGCCTCCAGGAAGA...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCAGAAGCCTGTGCAGGAGCTCTTCGAAAGGCAATaGCATTCTGAGTGTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLGSDQLCLEVQKPVQELFERQ*HSECSA Trigger: GGCTGAACACTCAGAATGCCATTGCCTTTCGAAGAG...CTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | AACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCAGAAGCCTGTGCAGGAGATCCTCTTTCCCCTTTaGGTCCCATTACAAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSLGSDQLCLEVQKPVQEILFPL*VPLQVV Trigger: GACAACTTGTAATGGGACTCAAAGGGGAAAGAGGAT...CTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAAGCTCTTCCTGGTTGTTaGCCACAAAAATCGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQALPGC*PQKSQE Trigger: TTCCTGCGATTTTTGTGGTCAACAACCAGGAAGAGC...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCAGCATGCTTTGTGGCTaGCCCGCTTCTTCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAAPREYAHLLLCGSQISMLCG*PASSDP Trigger: TGGATCAGAAGAAGCGGGGCAGCCACAAAGCATGCT...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGAGAACCACAAGGTCAAGATGGCGCCCCTCAGAGAACTTCAAGAGGAGAACCCTTTTCTCCTTTaGGACCCAAGTCACCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRENHKVKMAPLRELQEENPFLL*DPSHPF Trigger: AAAGGGGTGACTTGGGTCCCAAAGGAGAAAAGGGTT...CTCCTCTTGAAGTTCTCTGAGGGGCGCCATCTTGACCTTGTGGTTCTCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CAA 72 bp | CTTTGTGGTTCTCAAATCTTGAGAGGCCCAACAGCCTaGGATCAGATCAGCTGTGCTTGGAGGTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCGSQILRGPTA*DQISCAWRCRS Trigger: GCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTTGGGCCTCTCAAGATTTGAGAACCACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | ATCCACGGTCTGAGCCAGCGTCTTTCCAGAAGAGATAAGGCATTACAGCCAGCTTTGATGAAAGTTGGCTaGGACACGATGGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHGLSQRLSRRDKALQPALMKVG*DTMEQK Trigger: CTTCTGCTCCATCGTGTCTCAGCCAACTTTCATCAA...AGCTGGCTGTAATGCCTTATCTCTTCTGGAAAGACGCTGGCTCAGACCGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| 3UTR CAA 72 bp | CTCAGCCGAGTCTTCACCCTCTTCTTGGGACTAAGCTaGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRVFTLFLGLS*DLVAFSVPLTD Trigger: ATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCTTAGTCCCAAGAAGAGGGTGAAGACTCGGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCGCTCTTCCTGGTTGTTaGCCACAAAAATCGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGAAPREYAHLLLCGSQIALPGC*PQKSQE Trigger: TTCCTGCGATTTTTGTGGTCAACAACCAGGAAGAGC...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTAAGGCAATGGCATTCTaGGTGTTCAGCCTCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSAKAMAF*VFSLSS Trigger: GCTTGAGAGGCTGAACACTCAGAATGCCATTGCCTT...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGATCAACATGAAATTGATTCTACCCTTCCTTCCTaGGCGGCCAAGGTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLDLVAFSVPLTDQHEIDSTLPS*AAKVPL Trigger: AAGGGGGACCTTGGCCGCCCAGGAAGGAAGGGTAGA...ATCAATTTCATGTTGATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGATCAACATGAAATTGATTTCCTGGTCTTCCTGTaGGGCCTCGGTGTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLDLVAFSVPLTDQHEIDFLVFL*GLGVLP Trigger: TGGCAGGACACCGAGGCCCCACAGGAAGACCAGGAA...ATCAATTTCATGTTGATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | CAAATCTTGAGAGGCCCAACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCCTCTCAAGCTCTTCCTaGTTGTTGACCACAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QILRGPTALDQISCAWRCLSSSS*LLTTKI Trigger: GATTTTTGTGGTCAACAACCAGGAAGAGCTTGAGAG...GCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTTGGGCCTCTCAAGATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTTGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGATCAACATGAAATTAGGGTGTGGAGTCGATaGAGCAGTACTGGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSLDLVAFSVPLTDQHEIRVWSR*SSTGCT Trigger: GGTGCACCCAGTACTGCTCCATCGACTCCACACCCT...AATTTCATGTTGATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTAGCCAAGGCTATCTTTaGAGTACAAAGATCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETRTNHTRPVDTCMLNSASQGYL*STKIAG Trigger: ACCAGCGATCTTTGTACTTCAAAGATAGCCTTGGCT...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| 3UTR CAA 72 bp | GAGTCAAAAGCATGTCGTAGCAGCAAGAATATATCCTaGTTTTGTCACATGAAGGTTAACAGGCACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESKACRSSKNIS*FCHMKVNRHCP Trigger: GGGACAGTGCCTGTTAACCTTCATGTGACAAAACAAGGATATATTCTTGCTGCTACGACATGCTTTTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGATCAACATGAAATTGATATCCTCTTTCCCCTTTaGGTCCCATTACAAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDLVAFSVPLTDQHEIDILFPL*VPLQVV Trigger: GACAACTTGTAATGGGACTCAAAGGGGAAAGAGGAT...ATCAATTTCATGTTGATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCCAGGGTGGGCATATAGAAGGTTTCTGGTTCTTTTAATTAAGACAGGACTCTCAAGCTCTTCCTaGTTGTTGACCACAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QFPGWAYRRFLVLLIKTGLSSSS*LLTTKI Trigger: GATTTTTGTGGTCAACAACCAGGAAGAGCTTGAGAG...TCCTGTCTTAATTAAAAGAACCAGAAACCTTCTATATGCCCACCCTGGAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | GGCCGTGGAGCCCCAAACCAGAGAAACCAGCGTGAGGAAACACCAGCACGTGCCAGCCCATCGGTCCTCTaGACCCCGGCAGGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGAPNQRNQREETPARASPSVL*TPAGPS Trigger: TGATGGGCCTGCCGGGGTCAAGAGGACCGATGGGCT...GGCACGTGCTGGTGTTTCCTCACGCTGGTTTCTCTGGTTTGGGGCTCCACGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CCA 90 bp | TGTCTCCCTTCTGACCCTGCTTGCCTCGTTTTCCTGGTCTTCCTGTaGGGCCTCGGTGTCCTGCCAGCCCAGACTCTCCCTTTGGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLPSDPACLVFLVFL*GLGVLPAQTLPLDP Trigger: TGGGTCCAAAGGGAGAGTCTGGGCTGGCAGGACACCGAGGCCCCACAGGAAGACCAGGAAAACGAGGCAAGCAGGGTCAGAAGGGAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CCA 90 bp | AGGACCTTGACGGCCAGGTTGACCAGAAGGCCCAGGCTTGCCTGGTaGGCCCATAATTCCACTGTCTCCCTTCTGACCCTGCTTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTLTARLTRRPRLAW*AHNSTVSLLTLLAS Trigger: CGAGGCAAGCAGGGTCAGAAGGGAGACAGTGGAATTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCAAGGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 90 bp | GGGGGCATGAGTAGGCAGCATGCTTTGTGGCTGCCCCGCTTCTTCTaGTCCAGGCCAGGAAGGGCTGCTGAGATTGGGACCACACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGMSRQHALWLPRFF*SRPGRAAEIGTTLL Trigger: CAACAGTGTGGTCCCAATCTCAGCAGCCCTTCCTGGCCTGGATCAGAAGAAGCGGGGCAGCCACAAAGCATGCTGCCTACTCATGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCAGCCCATCGGTCCTCTaGACCCCGGCAGGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VRRCRLLSSQDLGSLKSFSPSVL*TPAGPS Trigger: TGATGGGCCTGCCGGGGTCAAGAGGACCGATGGGCT...GAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGAGTCTCCCACACAGGACACAGTTGTGGAGGGCACTGTCAAGACAGAGCCAGAAGGCCCAGGCTaGCCTGGTGGGCCCATAATT | + |
|
Preference number: 5 (lower is better) Translates to: WGESPTQDTVVEGTVKTEPEGPG*PGGPII Trigger: AATTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGG...CTCTGTCTTGACAGTGCCCTCCACAACTGTGTCCTGTGTGGGAGACTCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 90 bp | CGCAAAGGCATCTTCCTGGAGGCCCTGGAAATCCTCTTTCCCCTTTaGGTCCCATTACAAGTTGTCCTGCAGATGGTGGGCCTGGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGIFLEALEILFPL*VPLQVVLQMVGLGA Trigger: GGCCCCCAGGCCCACCATCTGCAGGACAACTTGTAATGGGACTCAAAGGGGAAAGAGGATTTCCAGGGCCTCCAGGAAGATGCCTTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGCTGGGAGCTGCAAAACCCTTTTCTCCTTaGGGACCCAAGTCACCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSGQLKGPSAGLKLGAAKPFSP*GPKSPL Trigger: AAGGGGTGACTTGGGTCCCAAAGGAGAAAAGGGTTT...TGCAGCTCCCAGCTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS GCA 90 bp | CCTGGTGCCGGTAACCGTCTCCACAGTAGGCCCGATGACAGTCGATaGAGCCATCACTCACATCGGGATTACCATCATCACACTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGAGNRLHSRPDDSR*SHHSHRDYHHHTLP Trigger: GGGAAGAGTGTGATGATGGTAATCCCGATGTGAGTGATGGCTGCATCGACTGTCATCGGGCCTACTGTGGAGACGGTTACCGGCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGATAAGGCATTACAGCCAGCTGTTTAGCCAGATTCGGGGAGGGGGAACACCAGAAGGCCCAGGCTaGCCTGGTGGGCCCATAATT | + |
|
Preference number: 5 (lower is better) Translates to: EEIRHYSQLFSQIRGGGTPEGPG*PGGPII Trigger: AATTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGG...TGTTCCCCCTCCCCGAATCTGGCTAAACAGCTGGCTGTAATGCCTTATCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | ATCCACGGTCTGAGCCAGCGTCTTTCCAGAAGAGATAAGGCATTACAGCCAGCTACCTTGACGGCCAGGTaGACCAGAAGGCCCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IHGLSQRLSRRDKALQPATLTAR*TRRPRL Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCAAGGT...AGCTGGCTGTAATGCCTTATCTCTTCTGGAAAGACGCTGGCTCAGACCGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | GGCCAGCTTGATGTGAAGGGTAGAGAAACAGCCACCGGTTCCATGGGCGGCAGCCAGCCAAGGCTATCTTaGAAGTACAAAGATCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GQLDVKGRETATGSMGGSQPRLS*KYKDRW Trigger: CCAGCGATCTTTGTACTTCAAAGATAGCCTTGGCTG...GCTGCCGCCCATGGAACCGGTGGCTGTTTCTCTACCCTTCACATCAAGCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | ATCCACGGTCTGAGCCAGCGTCTTTCCAGAAGAGATAAGGCATTACAGCCAGCTAGTAGGCAGCATGCTTaGTGGCTGCCCCGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IHGLSQRLSRRDKALQPASRQHA*WLPRFF Trigger: GAAGAAGCGGGGCAGCCACAAAGCATGCTGCCTACT...AGCTGGCTGTAATGCCTTATCTCTTCTGGAAAGACGCTGGCTCAGACCGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCAGAAGCCTGTGCAGGAGGCCCAGACTCTCCCTTaGGACCCATTTCACCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLGSDQLCLEVQKPVQEAQTLP*DPFHLS Trigger: AGAAAGGTGAAATGGGTCCAAAGGGAGAGTCTGGGC...CTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCACCTTGACGGCCAGGTaGACCAGAAGGCCCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGAAPREYAHLLLCGSQITLTAR*TRRPRL Trigger: AAGCCTGGGCCTTCTGGTCAACCTGGCCGTCAAGGT...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGTGCCGCCTGCTGAGTTCCCAAGACTTAGGCTCACTGAAGAGCTTCCAAGCCCAGACTCTCCCTTaGGACCCATTTCACCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRCRLLSSQDLGSLKSFQAQTLP*DPFHLS Trigger: AGAAAGGTGAAATGGGTCCAAAGGGAGAGTCTGGGC...TTGGAAGCTCTTCAGTGAGCCTAAGTCTTGGGAACTCAGCAGGCGGCACCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 90 bp | CAATGGCATTCTGAGTGTTCAGCCTCTCAAGCTCTTCCTGGTTGTTaGCCACAAAAATCGCAGGAACTCGAGGGGAGCCACGCCCATACA | + |
|
Preference number: 5 (lower is better) Translates to: QWHSECSASQALPGC*PQKSQELEGSHAHT Trigger: TGTATGGGCGTGGCTCCCCTCGAGTTCCTGCGATTTTTGTGGTCAACAACCAGGAAGAGCTTGAGAGGCTGAACACTCAGAATGCCATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CCA 90 bp | ATTCACATTCACAGGGGGTCCGCAAAGGCATCTTCCTGGAGGCCCTaGAAATCCTCTTTCCCCTTTGAGTCCCATTACAAGTTGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IHIHRGSAKASSWRP*KSSFPFESHYKLSC Trigger: GCAGGACAACTTGTAATGGGACTCAAAGGGGAAAGAGGATTTCCAGGGCCTCCAGGAAGATGCCTTTGCGGACCCCCTGTGAATGTGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTAGTAGGCAGCATGCTTaGTGGCTGCCCCGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETRTNHTRPVDTCMLNSASRQHA*WLPRFF Trigger: GAAGAAGCGGGGCAGCCACAAAGCATGCTGCCTACT...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | CATGAAATTGATCCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGAAACCCTTTTCTCCTTaGGGACCCAAGTCACCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HEIDPGSGQLKGPSAGLKKPFSP*GPKSPL Trigger: AAGGGGTGACTTGGGTCCCAAAGGAGAAAAGGGTTT...CTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGGATCAATTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCAGAAGCCTGTGCAGGAGCAGCCAAGGCTATCTTaGAAGTACAAAGATCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLGSDQLCLEVQKPVQEQPRLS*KYKDRW Trigger: CCAGCGATCTTTGTACTTCAAAGATAGCCTTGGCTG...CTCCTGCACAGGCTTCTGCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | CAAATCTTGAGAGGCCCAACAGCCTTGGATCAGATCAGCTGTGCTTGGAGGTGCGGAGCAGAAGAAGAGTaGGAGATAAATTCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QILRGPTALDQISCAWRCGAEEE*EINSQS Trigger: ACTTTGGGAATTTATCTCCAACTCTTCTTCTGCTCC...GCACCTCCAAGCACAGCTGATCTGATCCAAGGCTGTTGGGCCTCTCAAGATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS-3UTR CAA 90 bp | CATGAAATTGATCCAGGCTCTGGCCAGTTGAAGGGTCCCTCAGCAGGTCTGAAGAATCCTCTTTCCCCTTaGAGTCCCATTACAAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HEIDPGSGQLKGPSAGLKNPLSP*SPITSC Trigger: ACAACTTGTAATGGGACTCAAAGGGGAAAGAGGATT...CTTCAGACCTGCTGAGGGACCCTTCAACTGGCCAGAGCCTGGATCAATTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCTGCACCAAGAGAATATGCTCACCTCCTGCTTTGTGGTTCTCAAATCTCAAGCTCTTCCTGGTaGTTGACCACAAAAATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGAAPREYAHLLLCGSQISSSSW*LTTKIA Trigger: TGCGATTTTTGTGGTCAACAACCAGGAAGAGCTTGA...GATTTGAGAACCACAAAGCAGGAGGTGAGCATATTCTCTTGGTGCAGCTCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | GAGACCAGAACAAACCACACCAGGCCTGTAGATACCTGTATGCTTAACAGTGCTTCAAGCTCTTCCTGGTaGTTGACCACAAAAATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ETRTNHTRPVDTCMLNSASSSSW*LTTKIA Trigger: TGCGATTTTTGTGGTCAACAACCAGGAAGAGCTTGA...AGCACTGTTAAGCATACAGGTATCTACAGGCCTGGTGTGGTTTGTTCTGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGCTTGGATCTAGTGGCTTTCTCAGTTCCTCTGACTGATCAACATGAAATTAATCCTCTTTCCCCTTaGAGTCCCATTACAAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLDLVAFSVPLTDQHEINPLSP*SPITSC Trigger: ACAACTTGTAATGGGACTCAAAGGGGAAAGAGGATT...AATTTCATGTTGATCAGTCAGAGGAACTGAGAAAGCCACTAGATCCAAGCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CCA 72 bp | TTTGGTCCTGTCTTGCCAGGAAGCCCAGGTGGACCCTaGGGCCCAGGGGGCCCAGGAGAGCCGAGCGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FGPVLPGSPGGP*GPGGPGEPSEP Trigger: AGGCTCGCTCGGCTCTCCTGGGCCCCCTGGGCCCCAGGGTCCACCTGGGCTTCCTGGCAAGACAGGACCAAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CCA 72 bp | TGGCCAGCCAACGGGCCCAGGCATGCCAGGAACACCTaGGGGTCCAGGTCTACCCTTCCTTCCTGGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WPANGPRHARNT*GSRSTLPSWAA Trigger: GGCCGCCCAGGAAGGAAGGGTAGACCTGGACCCCCAGGTGTTCCTGGCATGCCTGGGCCCGTTGGCTGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 72 bp | TCATGTCTGGGGAGAGAAGCGGGCTCCGGCTGCCTCTaGAGAACGGCGGTGGGAAGAGTGGGGGCGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCLGREAGSGCL*RTAVGRVGAVG Trigger: CCCCACCGCCCCCACTCTTCCCACCGCCGTTCTTCAGAGGCAGCCGGAGCCCGCTTCTCTCCCCAGACATGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112027.9 ENSMUST00000124014.8 ENSMUST00000150054.2 |
||
| CDS TCA 72 bp | TGGGGCCCAGGGGGCCCAGGAGAGCCGAGCGAGCCTTaGATGCAGGGTGATGGTGACGCCTCAAGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WGPGGPGEPSEP*MQGDGDASSSR Trigger: TCTGGAACTTGAGGCGTCACCATCACCCTGCATTCAAGGCTCGCTCGGCTCTCCTGGGCCCCCTGGGCCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CCA 72 bp | CAGGTCACCTTTTTCACCCCTGGGTCCTTCAGGGCCTaGCCAGCCAACGGGCCCAGGCATGCCAGGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: QVTFFTPGSFRA*PANGPRHARNT Trigger: GGTGTTCCTGGCATGCCTGGGCCCGTTGGCTGGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTGACCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS GCA 72 bp | GCCCAGGGGGCCCAGGAGAGCCGAGCGAGCCTTGAATaGAGGGTGATGGTGACGCCTCAAGTTCCAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AQGAQESRASLE*RVMVTPQVPEG Trigger: ACCTTCTGGAACTTGAGGCGTCACCATCACCCTGCATTCAAGGCTCGCTCGGCTCTCCTGGGCCCCCTGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CAA 72 bp | TGGGGCCTCGGTGTCCTGCCAGCCCAGACTCTCCCTTaGGACCCATTTCACCTTTCTGCCCCAGCATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WGLGVLPAQTLP*DPFHLSAPAFQ Trigger: CTGGAATGCTGGGGCAGAAAGGTGAAATGGGTCCAAAGGGAGAGTCTGGGCTGGCAGGACACCGAGGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 72 bp | AGTAGGCAGCATGCTTTGTGGCTGCCCCGCTTCTTCTaGTCCAGGCCAGGAAGGGCTGCTGAGATTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SRQHALWLPRFF*SRPGRAAEIGT Trigger: GGTCCCAATCTCAGCAGCCCTTCCTGGCCTGGATCAGAAGAAGCGGGGCAGCCACAAAGCATGCTGCCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112027.9 |
||
| CDS GCA 72 bp | ACATCGGGATTACCATCATCACACTCTTCCCCAGGCTaGAGGACTCCATCCCCGCAGGTGCCAGGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSGLPSSHSSPG*RTPSPQVPGCF Trigger: GAAGCAGCCTGGCACCTGCGGGGATGGAGTCCTGCAGCCTGGGGAAGAGTGTGATGATGGTAATCCCGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS GCA 72 bp | AGCGGCAGGGTGTGGAGTCGATGGAGCAGTACTGGGTaGACCGAAGGTCTCCGTATGATCCAGGGAGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGRVWSRWSSTG*TEGLRMIQGDR Trigger: CCTATCTCCCTGGATCATACGGAGACCTTCGGTGCACCCAGTACTGCTCCATCGACTCCACACCCTGCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CAA 90 bp | CCGCAAAGGCATCTTCCTGGAGGCCCTGGAAATCCTCTTTCCCCTTaGAGTCCCATTACAAGTTGTCCTGCAGATGGTGGGCCTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQRHLPGGPGNPLSP*SPITSCPADGGPGG Trigger: GCCCCCAGGCCCACCATCTGCAGGACAACTTGTAATGGGACTCAAAGGGGAAAGAGGATTTCCAGGGCCTCCAGGAAGATGCCTTTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 72 bp | CTTCTGATCCAGGCCAGGAAGGGCCAAGTAGCCAGCTaGGTGACAGAGAAGTCCCGAAATGATGAGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLIQARKGQVAS*VTEKSRNDEEK Trigger: CTTCTCCTCATCATTTCGGGACTTCTCTGTCACTCAGCTGGCTACTTGGCCCTTCCTGGCCTGGATCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150054.2 |
||
| CDS GCA 72 bp | GGTAACCGTCTCCACAGTAGGCCCGATGACAGTCGATaGAGCCATCACTCACATCGGGATTACCATCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GNRLHSRPDDSR*SHHSHRDYHHH Trigger: GTGATGATGGTAATCCCGATGTGAGTGATGGCTGCATCGACTGTCATCGGGCCTACTGTGGAGACGGTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS CAA 72 bp | GGGGTGAGCTGGATGGGGAGCCAGCCAAGGCTATCTTaGAAGTACAAAGATCGCTGGTCTCTTCGAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GVSWMGSQPRLS*KYKDRWSLRKA Trigger: TGCCTTTCGAAGAGACCAGCGATCTTTGTACTTCAAAGATAGCCTTGGCTGGCTCCCCATCCAGCTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 72 bp | TCTGAGTGTTCAGCCTCTCAAGCTCTTCCTGGTTGTTaGCCACAAAAATCGCAGGAACTCGAGGGGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SECSASQALPGC*PQKSQELEGSH Trigger: GTGGCTCCCCTCGAGTTCCTGCGATTTTTGTGGTCAACAACCAGGAAGAGCTTGAGAGGCTGAACACTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||
| CDS TCA 72 bp | AAAGATCGCTGGTCTCTTCGAAAGGCAATGGCATTCTaGGTGTTCAGCCTCTCAAGCTCTTCCTGGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KDRWSLRKAMAF*VFSLSSSSWLL Trigger: CAACAACCAGGAAGAGCTTGAGAGGCTGAACACTCAGAATGCCATTGCCTTTCGAAGAGACCAGCGATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112027.9 ENSMUST00000150054.2 |
||