Pregenerated sensors for COLGALT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032649Ensembl transcript IDs: ENSMUST00000044311.9, ENSMUST00000127586.8
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGAAGTGCTTCCGTGTTCTTGGCGGTGCTGCGGATGTGTCCTTaGTTCCGGGATTTCCAGGAGTGTGTCCTGTCCCAGTCAGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GGSASVFLAVLRMCP*FRDFQECVLSQSVA Trigger: GGCCACTGACTGGGACAGGACACACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR GCA 90 bp | CCAGGGAAGTTGGCGGTGGAAGTGCTTCCGTGTTCTTGGCGGTGCTaGGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGTGTGTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: PGKLAVEVLPCSWRC*GCVLASGISRSVSC Trigger: ACAGGACACACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTTCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR GCA 90 bp | TGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCGTGTTCTTGGCGGTaGTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGTGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: CPGKLAVEVLPCSWR*CGCVLASGISRSVS Trigger: GGACACACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTTCCCTGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR CCA 90 bp | GCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCGTGTTCTTaGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: AQCPGKLAVEVLPCS*RCCGCVLASGISRS Trigger: ACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR TCA 90 bp | TGTCCTGTCCCAGTCAGTGGCCACTGTCTCATTGTCCCAGATGGTTaGCGTTTCTGTGTCGCTCAGATAGCCTGGCTGGCCTGTGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: CPVPVSGHCLIVPDG*RFCVAQIAWLACVV Trigger: CACTACACAGGCCAGCCAGGCTATCTGAGCGACACAGAAACGTCAACCATCTGGGACAATGAGACAGTGGCCACTGACTGGGACAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR CCA 90 bp | AGTGTGTCCTGTCCCAGTCAGTGGCCACTGTCTCATTGTCCCAGATaGTTGACGTTTCTGTGTCGCTCAGATAGCCTGGCTGGCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SVSCPSQWPLSHCPR*LTFLCRSDSLAGLC Trigger: ACACAGGCCAGCCAGGCTATCTGAGCGACACAGAAACGTCAACCATCTGGGACAATGAGACAGTGGCCACTGACTGGGACAGGACACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR CCA 90 bp | GTCCTTGCTTCCGGGATTTCCAGGAGTGTGTCCTGTCCCAGTCAGTaGCCACTGTCTCATTGTCCCAGATGGTTGACGTTTCTGTGTCGC | + |
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Preference number: 1 (lower is better) Translates to: VLASGISRSVSCPSQ*PLSHCPRWLTFLCR Trigger: GCGACACAGAAACGTCAACCATCTGGGACAATGAGACAGTGGCCACTGACTGGGACAGGACACACTCCTGGAAATCCCGGAAGCAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR TCA 90 bp | AACCTTGCAGACCACACACCCAGGAAGCTTTCAGAGTTCGTCTCTTaGAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCGT | + |
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Preference number: 1 (lower is better) Translates to: NLADHTPRKLSEFVS*RHSVQGSWRWKCFR Trigger: ACGGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCTGAAAGCTTCCTGGGTGTGTGGTCTGCAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR CCA 90 bp | AGCCACAGGATGCTTGTTGTACATGATTGGCAGAAACTCATCCACTaGCAACATCTTCCCAAAGGGATCGGCTCCGACAAGCTTCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: SHRMLVVHDWQKLIH*QHLPKGIGSDKLLC Trigger: GCACAGAAGCTTGTCGGAGCCGATCCCTTTGGGAAGATGTTGCCAGTGGATGAGTTTCTGCCAATCATGTACAACAAGCATCCTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR TCA 90 bp | TGGGAAATTCAGGCAATTCAGATGCGCAGACTCACGTGTCAATACTaGCATTGCCCAGTGTGCAGTGAGAGTCTGAGACATCTGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: WEIQAIQMRRLTCQY*HCPVCSESLRHLFL Trigger: GAGGAACAGATGTCTCAGACTCTCACTGCACACTGGGCAATGTCAGTATTGACACGTGAGTCTGCGCATCTGAATTGCCTGAATTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| 3UTR CCA 90 bp | ATAATACTCCTTGTACTCAGCCACAGGATGCTTGTTGTACATGATTaGCAGAAACTCATCCACTGGCAACATCTTCCCAAAGGGATCGGC | + |
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Preference number: 1 (lower is better) Translates to: IILLVLSHRMLVVHD*QKLIHWQHLPKGIG Trigger: GCCGATCCCTTTGGGAAGATGTTGCCAGTGGATGAGTTTCTGCCAATCATGTACAACAAGCATCCTGTGGCTGAGTACAAGGAGTATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR TCA 90 bp | TGGCTCTTTGACTTGCATTCTTTTTCGACCGATGTAATTTGCAGGTaGAATTTCCACCATTGTCCCCAGTGGTCCTCAGGATGTTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: WLFDLHSFSTDVICR*NFHHCPQWSSGCFL Trigger: GAGGAAACATCCTGAGGACCACTGGGGACAATGGTGGAAATTTCACCTGCAAATTACATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR GCA 90 bp | AAACAGATGAGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTaGAGACCACACACCCAGGAAGCTTTCAGAGTTCGTCTCTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: KQMSSPLENPDSDEP*RPHTQEAFRVRLLK Trigger: CTTCAAGAGACGAACTCTGAAAGCTTCCTGGGTGTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACTCATCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR TCA 90 bp | ACTCATAATACTCCTTGTACTCAGCCACAGGATGCTTGTTGTACATaGTTGGCAGAAACTCATCCACTGGCAACATCTTCCCAAAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: THNTPCTQPQDACCT*LAETHPLATSSQRD Trigger: ATCCCTTTGGGAAGATGTTGCCAGTGGATGAGTTTCTGCCAATCATGTACAACAAGCATCCTGTGGCTGAGTACAAGGAGTATTATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR GCA 90 bp | CCAGTAGGAATAATCAGCTTCGACGAGATTTACAACATTGGGCACTaGCTTCTCTGGCTCTTTGACTTGCATTCTTTTTCGACCGATGTA | + |
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Preference number: 1 (lower is better) Translates to: PVGIISFDEIYNIGH*LLWLFDLHSFSTDV Trigger: TACATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCGTCGAAGCTGATTATTCCTACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR TCA 90 bp | CTTCGACGAGATTTACAACATTGGGCACTGCCTTCTCTGGCTCTTTaGCTTGCATTCTTTTTCGACCGATGTAATTTGCAGGTGAAATTT | + |
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Preference number: 1 (lower is better) Translates to: LRRDLQHWALPSLAL*LAFFFDRCNLQVKF Trigger: AAATTTCACCTGCAAATTACATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCGTCGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR TCA 90 bp | AACGAGGACAAGTGTGAGGCTGAAATGTATTCTGACCCTCAACAGTaGCTTATTAAACTCATCAACAGTGACTTATTACACTCACACCTG | + |
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Preference number: 1 (lower is better) Translates to: NEDKCEAEMYSDPQQ*LIKLINSDLLHSHL Trigger: CAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAGAATACATTTCAGCCTCACACTTGTCCTCGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| 3UTR CAA 90 bp | CGGTGGAAGTGCTTCCGTGTTCTTGGCGGTGCTGCGGATGTGTCCTaGCTTCCGGGATTTCCAGGAGTGTGTCCTGTCCCAGTCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RWKCFRVLGGAADVS*LPGFPGVCPVPVSG Trigger: GCCACTGACTGGGACAGGACACACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR CAA 90 bp | GGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCGTGTTCTaGGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GTVSREVGGGSASVF*AVLRMCPCFRDFQE Trigger: CTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR CAA 90 bp | GTGTCCTGTCCCAGTCAGTGGCCACTGTCTCATTGTCCCAGATGGTaGACGTTTCTGTGTCGCTCAGATAGCCTGGCTGGCCTGTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: VSCPSQWPLSHCPRW*TFLCRSDSLAGLCS Trigger: ACTACACAGGCCAGCCAGGCTATCTGAGCGACACAGAAACGTCAACCATCTGGGACAATGAGACAGTGGCCACTGACTGGGACAGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR CAA 90 bp | GAAGCTTTCAGAGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTaGGCGGTGGAAGTGCTTCCGTGTTCTTGGCGGTGCTGCGGATGT | + |
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Preference number: 2 (lower is better) Translates to: EAFRVRLLKAQCPGK*AVEVLPCSWRCCGC Trigger: ACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCTGAAAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCGATGAGCAGAGGCTCTaGGGAGAAGGCTTTCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: SSSLEGTVSREVGGGSASDEQRL*GEGFQV Trigger: GACTTGAAAGCCTTCTCCGCAGAGCCTCTGCTCATC...GGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTCTTGGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGTGTTCTTGGATGAGAATATaGGCCATGTTGCCACACCAG | + |
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Preference number: 2 (lower is better) Translates to: VFLAVLRMCPCFRDFQECSWMRI*AMLPHQ Trigger: CTGGTGTGGCAACATGGCTCATATTCTCATCCAAGA...ACACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR GCA 90 bp | CATACCCAGGAAGGAAGGGTGGCTGAGGTGAAGCACCACAAGCACTCTCAACAGGACAGTGATGAACCTTaGAGACCACACACCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HTQEGRVAEVKHHKHSQQDSDEP*RPHTQE Trigger: TTCCTGGGTGTGTGGTCTGCAAGGTTCATCACTGTC...CTGTTGAGAGTGCTTGTGGTGCTTCACCTCAGCCACCCTTCCTTCCTGGGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTTCTTGGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGTGTGTGCCATTTCTTGGATaGGAATATGAGCCATGTTGC | + |
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Preference number: 2 (lower is better) Translates to: VFLAVLRMCPCFRDFQECVPFLG*EYEPCC Trigger: GCAACATGGCTCATATTCTCATCCAAGAAATGGCAC...ACACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCTACAACATTGGGCACTaGCTTCTCTGGCTCTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: SSSLEGTVSREVGGGSASYNIGH*LLWLFD Trigger: GTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTA...GGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTCTTGTCTGTGTTGACTaGTCACTTACTGATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: QSSSLEGTVSREVGGGSALVCVD*SLTDVT Trigger: TGTCACATCAGTAAGTGAGCAGTCAACACAGACAAG...AGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGCAACATCTTCCCAAAGGGATCGGCTCCGACAAGCTTCTGTGCTCCTTTCTGGCTCTTTGACTTaGATTCTTTTTCGACCGATG | + |
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Preference number: 2 (lower is better) Translates to: PLATSSQRDRLRQASVLLSGSLT*ILFRPM Trigger: CATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGA...AAGGAGCACAGAAGCTTGTCGGAGCCGATCCCTTTGGGAAGATGTTGCCAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAAACTCATCAACAGTGACTTATTACACTCACACCTGCAGTTCCTCCCCAGGGTCGCTCAGATAGCCTaGCTGGCCTGTGTAGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: IKLINSDLLHSHLQFLPRVAQIA*LACVVR Trigger: ACGCACTACACAGGCCAGCCAGGCTATCTGAGCGAC...CCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCATTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGAGAAGGGTGGCTGAGGTaGAGCACCACAAGCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: RHSCTHSNHKQNTEHPRREGWLR*STTSTL Trigger: GAGAGTGCTTGTGGTGCTTCACCTCAGCCACCCTTC...TCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCATTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGAGGAAGGAAGGGTGGCTaGGGTGAAGCACCACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RHSCTHSNHKQNTEHPRRGRKGG*GEAPQA Trigger: TGCTTGTGGTGCTTCACCTCAGCCACCCTTCCTTCC...TCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| 3UTR CAA 90 bp | GCATTCTTTTTCGACCGATGTAATTTGCAGGTGAAATTTCCACCATaGTCCCCAGTGGTCCTCAGGATGTTTCCTCAGCTCTGTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: AFFFDRCNLQVKFPP*SPVVLRMFPQLCQE Trigger: CTCTTGACAGAGCTGAGGAAACATCCTGAGGACCACTGGGGACAATGGTGGAAATTTCACCTGCAAATTACATCGGTCGAAAAAGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAAACTCATCAACAGTGACTTATTACACTCACACCTGCAGTTCCTCCCCAGGTTGGATAATAACCACTaGGCCATCGCTCCAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: IKLINSDLLHSHLQFLPRLDNNH*AIAPAL Trigger: GAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAA...CCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAATTTGCAGGTGAAATTTCCACCATTGTCCCCAGTGGTCCTCAGGATGTTTGACAGTGATGAACCTTaGAGACCACACACCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: CNLQVKFPPLSPVVLRMFDSDEP*RPHTQE Trigger: TTCCTGGGTGTGTGGTCTGCAAGGTTCATCACTGTC...AAACATCCTGAGGACCACTGGGGACAATGGTGGAAATTTCACCTGCAAATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR CCA 90 bp | TACGTACTCCATTGGATAATAACCACTGAGCCATCGCTCCAGCTCTCACTCCATGCCCAATTAATGGTTTaGTTTCCCCATTCCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: YVLHWIITTEPSLQLSLHAQLMV*FPHSQT Trigger: TGTCTGGGAATGGGGAAACCAAACCATTAATTGGGC...ATGGAGTGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAACACCATTGTCCCCAGTaGTCCTCAGGATGTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: PALTPWDNKAKKKTSTLQHHCPQ*SSGCFL Trigger: GAGGAAACATCCTGAGGACCACTGGGGACAATGGTG...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR TCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACCCCCAGGCGAAGGGGTaGCATATAAGGTGTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHPQAKG*HIRCEV Trigger: AACCTCACACCTTATATGTCACCCCTTCGCCTGGGG...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| 3UTR-3UTR TCA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCTCTTGGATGAGAATATaGGCCATGTTGCCACACCAG | + |
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Preference number: 2 (lower is better) Translates to: HTFKSQTKYRTPKETLGTSWMRI*AMLPHQ Trigger: CTGGTGTGGCAACATGGCTCATATTCTCATCCAAGA...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| 3UTR-3UTR TCA 90 bp | ATTAAACTCATCAACAGTGACTTATTACACTCACACCTGCAGTTCCTCCCCAGGCCTTCTCTGGCTCTTTaGCTTGCATTCTTTTTCGAC | + |
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Preference number: 2 (lower is better) Translates to: IKLINSDLLHSHLQFLPRPSLAL*LAFFFD Trigger: GTCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGG...CCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCGCCCAATTAATGGTTTaGTTTCCCCATTCCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: LQLSLHGIIKPRRKHPLCAQLMV*FPHSQT Trigger: TGTCTGGGAATGGGGAAACCAAACCATTAATTGGGC...GCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGGTTTCCCCATTCCCAGACACTTGTTACATAGTACAGTTTTCAAGGTCACGAGATTTACAACATTaGGCACTGCCTTCTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GLVSPFPDTCYIVQFSRSRDLQH*ALPSLA Trigger: AGCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCG...TGACCTTGAAAACTGTACTATGTAACAAGTGTCTGGGAATGGGGAAACCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR TCA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCGTGCCATTTCTTGGATaGGAATATGAGCCATGTTGC | + |
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Preference number: 2 (lower is better) Translates to: HTFKSQTKYRTPKETLGTVPFLG*EYEPCC Trigger: GCAACATGGCTCATATTCTCATCCAAGAAATGGCAC...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCGGGCACTGCCTTCTCTaGCTCTTTGACTTGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: QTHDRAPLNKSPINGLVSGHCLL*LFDLHS Trigger: AGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCC...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCCTTGTTGTACATGATTaGCAGAAACTCATCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LQLSLHGIIKPRRKHPLCLVVHD*QKLIHW Trigger: CCAGTGGATGAGTTTCTGCCAATCATGTACAACAAG...GCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGGTTTCCCCATTCCCAGACACTTGTTACATAGTACAGTTTTCAAGGTCACTTGTCTGTGTTGACTaGTCACTTACTGATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: GLVSPFPDTCYIVQFSRSLVCVD*SLTDVT Trigger: TGTCACATCAGTAAGTGAGCAGTCAACACAGACAAG...TGACCTTGAAAACTGTACTATGTAACAAGTGTCTGGGAATGGGGAAACCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCATTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACTGCAAAAGCCAAGCTaGGAAATTCAGGCAATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RHSCTHSNHKQNTEHPRRLQKPS*EIQAIQ Trigger: CTGAATTGCCTGAATTTCCCAGCTTGGCTTTTGCAG...TCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCTCTCATTGTCCCAGATaGTTGACGTTTCTGTGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: QTHDRAPLNKSPINGLVSSHCPR*LTFLCR Trigger: GCGACACAGAAACGTCAACCATCTGGGACAATGAGA...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR CAA 90 bp | GCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTaGCAACAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATT | + |
|
Preference number: 2 (lower is better) Translates to: ALTPWDNKAKKKTST*QQTHDRAPLNKSPI Trigger: AATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTGTTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR-3UTR TCA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCATGACAGAGCTCCTTTaGATAAAAGCCCAATTAATG | + |
|
Preference number: 2 (lower is better) Translates to: HTFKSQTKYRTPKETLGTMTELL*IKAQLM Trigger: CATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCAT...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCGATGTAATTTGCAGGTaGAATTTCCACCATTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: QTHDRAPLNKSPINGLVSDVICR*NFHHCP Trigger: GGGACAATGGTGGAAATTTCACCTGCAAATTACATC...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCGATGCTTGTTGTACATaGTTGGCAGAAACTCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: QTHDRAPLNKSPINGLVSDACCT*LAETHP Trigger: TGGATGAGTTTCTGCCAATCATGTACAACAAGCATC...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR-3UTR GCA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCAGAAAACATCCACTTTaGAACAAACTCATGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HTFKSQTKYRTPKETLGTRKHPL*NKLMTE Trigger: CTCTGTCATGAGTTTGTTGCAAAGTGGATGTTTTCT...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACAGTTACGTACTCCATTaGATAATAACCACTGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHSYVLH*IITTEP Trigger: TGGCTCAGTGGTTATTATCCAATGGAGTACGTAACT...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | GCTTCCGTGTTCTTGGCGGTGCTGCGGATGTGTCCTTaGTTCCGGGATTTCCAGGAGTGTGTCCTGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ASVFLAVLRMCP*FRDFQECVLSQ Trigger: CTGGGACAGGACACACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR CCA 72 bp | CCAGGGAAGTTGGCGGTGGAAGTGCTTCCGTGTTCTTaGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: PGKLAVEVLPCS*RCCGCVLASGI Trigger: AATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTTCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | CATCTTCCCAAAGGGATCGGCTCCGACAAGCTTCTGTaGTCCTTCCAGGGAAATGGCGTAGCCCAGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HLPKGIGSDKLL*SFQGNGVAQGP Trigger: TGGACCCTGGGCTACGCCATTTCCCTGGAAGGAGCACAGAAGCTTGTCGGAGCCGATCCCTTTGGGAAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | TTGGCGGTGGAAGTGCTTCCGTGTTCTTGGCGGTGCTaGGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LAVEVLPCSWRC*GCVLASGISRS Trigger: ACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | AAGTTGGCGGTGGAAGTGCTTCCGTGTTCTTGGCGGTaGTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLAVEVLPCSWR*CGCVLASGISR Trigger: CCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR TCA 72 bp | GACCACACACCCAGGAAGCTTTCAGAGTTCGTCTCTTaGAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DHTPRKLSEFVS*RHSVQGSWRWK Trigger: CTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCTGAAAGCTTCCTGGGTGTGTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR CCA 72 bp | GCTTCTCACCAGCGGTCTTCCCTGCAAAAGCCAAGCTaGGAAATTCAGGCAATTCAGATGCGCAGACTCACG | + |
|
Preference number: 3 (lower is better) Translates to: ASHQRSSLQKPS*EIQAIQMRRLT Trigger: CGTGAGTCTGCGCATCTGAATTGCCTGAATTTCCCAGCTTGGCTTTTGCAGGGAAGACCGCTGGTGAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR CCA 72 bp | TGTCCCAGTCAGTGGCCACTGTCTCATTGTCCCAGATaGTTGACGTTTCTGTGTCGCTCAGATAGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CPSQWPLSHCPR*LTFLCRSDSLA Trigger: AGCCAGGCTATCTGAGCGACACAGAAACGTCAACCATCTGGGACAATGAGACAGTGGCCACTGACTGGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTCCCAAAGGGATCGGCTCCGACAAGCTTCTGTGCTCCTTCCAGGGAAATGGTGAAATTTCCACCATaGTCCCCAGTGGTCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IFPKGSAPTSFCAPSREMVKFPP*SPVVLR Trigger: CCTGAGGACCACTGGGGACAATGGTGGAAATTTCAC...CATTTCCCTGGAAGGAGCACAGAAGCTTGTCGGAGCCGATCCCTTTGGGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR CCA 72 bp | GCCCATGTCGCTACCCAAGCCAGTTACGTACTCCATTaGATAATAACCACTGAGCCATCGCTCCAGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AHVATQASYVLH*IITTEPSLQLS Trigger: TGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTAACTGGCTTGGGTAGCGACATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | CATACCCAGGAAGGAAGGGTGGCTGAGGTGAAGCACCACAAGCACTCTCAACAGAGCCCAATTAATGGTTaGGTTTCCCCATTCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HTQEGRVAEVKHHKHSQQSPING*VSPFPD Trigger: GTCTGGGAATGGGGAAACCAAACCATTAATTGGGCT...CTGTTGAGAGTGCTTGTGGTGCTTCACCTCAGCCACCCTTCCTTCCTGGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR-3UTR CAA 90 bp | CATACCCAGGAAGGAAGGGTGGCTGAGGTGAAGCACCACAAGCACTCTCAACAGTTGGGGTGCCATTTCTaGGATGAGAATATGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HTQEGRVAEVKHHKHSQQLGCHF*DENMSH Trigger: ATGGCTCATATTCTCATCCAAGAAATGGCACCCCAA...CTGTTGAGAGTGCTTGTGGTGCTTCACCTCAGCCACCCTTCCTTCCTGGGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR TCA 72 bp | GTCAATACTGACATTGCCCAGTGTGCAGTGAGAGTCTaGGACATCTGTTCCTCTGCTTGCTTCACCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: VNTDIAQCAVRV*DICSSACFTLQ Trigger: CTGTAGGGTGAAGCAAGCAGAGGAACAGATGTCTCAGACTCTCACTGCACACTGGGCAATGTCAGTATTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR TCA 72 bp | CAGGCAATTCAGATGCGCAGACTCACGTGTCAATACTaGCATTGCCCAGTGTGCAGTGAGAGTCTGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: QAIQMRRLTCQY*HCPVCSESLRH Trigger: ATGTCTCAGACTCTCACTGCACACTGGGCAATGTCAGTATTGACACGTGAGTCTGCGCATCTGAATTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR GCA 72 bp | CACATGGCACCTAGACATTTTGATGAACACTCTAGCTaGCATGATGGTCAAGAGCCCATGTCGCTACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HMAPRHFDEHSS*HDGQEPMSLPK Trigger: CTTGGGTAGCGACATGGGCTCTTGACCATCATGGCAGCTAGAGTGTTCATCAAAATGTCTAGGTGCCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | CCAGTGTGCAGTGAGAGTCTGAGACATCTGTTCCTCTaGTTGCTTCACCCTACAGACGATGGTTTTTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: PVCSESLRHLFL*LLHPTDDGFST Trigger: AGTGGAAAAACCATCGTCTGTAGGGTGAAGCAAGCAGAGGAACAGATGTCTCAGACTCTCACTGCACACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR-3UTR CAA 90 bp | GATGAACCTTGCAGACCACACACCCAGGAAGCTTTCAGAGTTCGTCTCTTGAAGAGCCCAATTAATGGTTaGGTTTCCCCATTCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DEPCRPHTQEAFRVRLLKSPING*VSPFPD Trigger: GTCTGGGAATGGGGAAACCAAACCATTAATTGGGCT...CTTCAAGAGACGAACTCTGAAAGCTTCCTGGGTGTGTGGTCTGCAAGGTTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR TCA 72 bp | ACTCACGTGTCAATACTGACATTGCCCAGTGTGCAGTaGGAGTCTGAGACATCTGTTCCTCTGCTTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: THVSILTLPSVQ*ESETSVPLLAS Trigger: TGAAGCAAGCAGAGGAACAGATGTCTCAGACTCTCACTGCACACTGGGCAATGTCAGTATTGACACGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR CCA 72 bp | ATGCTTGTTGTACATGATTGGCAGAAACTCATCCACTaGCAACATCTTCCCAAAGGGATCGGCTCCGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: MLVVHDWQKLIH*QHLPKGIGSDK Trigger: CTTGTCGGAGCCGATCCCTTTGGGAAGATGTTGCCAGTGGATGAGTTTCTGCCAATCATGTACAACAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCGGCTTCCTAGGGAATTaGGTTTTTAATTTCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSLEGTVSREVGGGSASGFLGN*VFNFSV Trigger: AACAGAGAAATTAAAAACCAAATTCCCTAGGAAGCC...GGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR TCA 72 bp | ACTCCTTGTACTCAGCCACAGGATGCTTGTTGTACATaGTTGGCAGAAACTCATCCACTGGCAACATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TPCTQPQDACCT*LAETHPLATSS Trigger: GGAAGATGTTGCCAGTGGATGAGTTTCTGCCAATCATGTACAACAAGCATCCTGTGGCTGAGTACAAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | AGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTaGAGACCACACACCCAGGAAGCTTTCAGAGTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: SSPLENPDSDEP*RPHTQEAFRVR Trigger: ACGAACTCTGAAAGCTTCCTGGGTGTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGTACTCCATTGGATAATAACCACTGAGCCATCGCTCCAGCTCTCACTCCATCCCATTCCCAGACACTaGTTACATAGTACAGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: YVLHWIITTEPSLQLSLHPIPRH*LHSTVF Trigger: GAAAACTGTACTATGTAACAAGTGTCTGGGAATGGG...ATGGAGTGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGGTTTCCCCATTCCCAGACACTTGTTACATAGTACAGTTTTCAAGGTCAACGAGATTTACAACATaGGGCACTGCCTTCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLVSPFPDTCYIVQFSRSTRFTT*GTAFSG Trigger: GCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCGT...TGACCTTGAAAACTGTACTATGTAACAAGTGTCTGGGAATGGGGAAACCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR TCA 72 bp | GACTTGCATTCTTTTTCGACCGATGTAATTTGCAGGTaGAATTTCCACCATTGTCCCCAGTGGTCCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLHSFSTDVICR*NFHHCPQWSSG Trigger: TCCTGAGGACCACTGGGGACAATGGTGGAAATTTCACCTGCAAATTACATCGGTCGAAAAAGAATGCAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | TTAAACTCATCAACAGTGACTTATTACACTCACACCTaGAGTTCCTCCCCAGGCGAAGGGGTGACATATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LNSSTVTYYTHT*SSSPGEGVTYK Trigger: CTTATATGTCACCCCTTCGCCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCTTGGGGTGCCATTTCTaGGATGAGAATATGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQLSLHGIIKPRRKHPLCLGCHF*DENMSH Trigger: ATGGCTCATATTCTCATCCAAGAAATGGCACCCCAA...GCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGTACTCCATTGGATAATAACCACTGAGCCATCGCTCCAGCTCTCACTCCATAAGAAAACATCCACTTaGCAACAAACTCATGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: YVLHWIITTEPSLQLSLHKKTST*QQTHDR Trigger: TCTGTCATGAGTTTGTTGCAAAGTGGATGTTTTCTT...ATGGAGTGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACCATCTGTTCCTCTGCTaGCTTCACCCTACAGACGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHHLFLC*LHPTDD Trigger: ATCGTCTGTAGGGTGAAGCAAGCAGAGGAACAGATG...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR TCA 72 bp | GATTTACAACATTGGGCACTGCCTTCTCTGGCTCTTTaGCTTGCATTCTTTTTCGACCGATGTAATTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLQHWALPSLAL*LAFFFDRCNLQ Trigger: CTGCAAATTACATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | ATAATCAGCTTCGACGAGATTTACAACATTGGGCACTaGCTTCTCTGGCTCTTTGACTTGCATTCTTTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: IISFDEIYNIGH*LLWLFDLHSFS Trigger: CGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCGTCGAAGCTGATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCGGCTTCCTAGGGAATTaGGTTTTTAATTTCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQLSLHGIIKPRRKHPLCGFLGN*VFNFSV Trigger: AACAGAGAAATTAAAAACCAAATTCCCTAGGAAGCC...GCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR TCA 72 bp | CATCCACTTTGCAACAAACTCATGACAGAGCTCCTTTaGATAAAAGCCCAATTAATGGTTTGGTTTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HPLCNKLMTELL*IKAQLMVWFPH Trigger: ATGGGGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTGTTGCAAAGTGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR CCA 72 bp | TCTTTCCCCCATAAATATCTAAATATTATAGCCACATaGCACCTAGACATTTTGATGAACACTCTAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SFPHKYLNIIAT*HLDILMNTLAA Trigger: GGCAGCTAGAGTGTTCATCAAAATGTCTAGGTGCCATGTGGCTATAATATTTAGATATTTATGGGGGAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR TCA 72 bp | AAGTGTGAGGCTGAAATGTATTCTGACCCTCAACAGTaGCTTATTAAACTCATCAACAGTGACTTATTACAC | + |
|
Preference number: 3 (lower is better) Translates to: KCEAEMYSDPQQ*LIKLINSDLLH Trigger: GTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAGAATACATTTCAGCCTCACACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR GCA 72 bp | ACTCCTATAAAATACACAGTTAAAGCCAGGCATTCTTaGACACATTCAAATCACAAACAAAATACCGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: TPIKYTVKARHS*THSNHKQNTEH Trigger: GTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAATGCCTGGCTTTAACTGTGTATTTTATAGGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR GCA 90 bp | CCGTGTTCTTGGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGTCCTGTTCGTAGAGTGTaGGCAGCATCCTGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSWRCCGCVLASGISRSPVRRV*AASCPA Trigger: GGCGGGACAGGATGCTGCGCACACTCTACGAACAGG...ACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTTCCTGCAGTGTCTGGTaGGGCTTCAGAGGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVRLLKAQCPGKLAVEVLSCSVW*GFRGMG Trigger: GCCCATCCCTCTGAAGCCCCACCAGACACTGCAGGA...AAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR CAA 72 bp | CCCAGTCAGTGGCCACTGTCTCATTGTCCCAGATGGTaGACGTTTCTGTGTCGCTCAGATAGCCTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSQWPLSHCPRW*TFLCRSDSLAG Trigger: GCCAGCCAGGCTATCTGAGCGACACAGAAACGTCAACCATCTGGGACAATGAGACAGTGGCCACTGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR CAA 72 bp | AGAGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTaGGCGGTGGAAGTGCTTCCGTGTTCTTGGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVRLLKAQCPGK*AVEVLPCSWRC Trigger: GCACCGCCAAGAACACGGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CCGTGTTCTTGGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGTACAACTGACACGAACTaGGAAGGCTCCATTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCSWRCCGCVLASGISRSTTDTN*EGSIGG Trigger: TCCTCCAATGGAGCCTTCCCAGTTCGTGTCAGTTGT...ACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| 3UTR CAA 72 bp | AGACCACACACCCAGGAAGCTTTCAGAGTTCGTCTCTaGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPHTQEAFRVRL*KAQCPGKLAVE Trigger: TTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCTGAAAGCTTCCTGGGTGTGTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGGCAACATCTTCCCAAAGGGATCGGCTCCGACAAGCTTCTGTGCTCCTTATTGTGATCAGTGGCTaGCCAGATAGCCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLATSSQRDRLRQASVLLIVISG*PDSHPA Trigger: AGCAGGATGGCTATCTGGGCAGCCACTGATCACAAT...AAGGAGCACAGAAGCTTGTCGGAGCCGATCCCTTTGGGAAGATGTTGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCGCAGTTCGAAGGGCTaGTTGTCGCAGTTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVRLLKAQCPGKLAVEVLRSSKG*LSQFHD Trigger: GTCATGAAACTGCGACAAGCAGCCCTTCGAACTGCG...AAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | TACGTACTCCATTGGATAATAACCACTGAGCCATCGCTCCAGCTCTCACTCCATTTCTCGACGTCCTCCTaGAGTGTCTGGTGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVLHWIITTEPSLQLSLHFSTSS*SVWWGF Trigger: GAAGCCCCACCAGACACTGCAGGAGGACGTCGAGAA...ATGGAGTGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | CATACCCAGGAAGGAAGGGTGGCTGAGGTGAAGCACCACAAGCACTCTCAACAGTACAACATTGGGCACTaGCTTCTCTGGCTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HTQEGRVAEVKHHKHSQQYNIGH*LLWLFD Trigger: GTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTA...CTGTTGAGAGTGCTTGTGGTGCTTCACCTCAGCCACCCTTCCTTCCTGGGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAACTCATCAACAGTGACTTATTACACTCACACCTGCAGTTCCTCCCCAGGCCCGGGACTCCAGCATaGGCGCCACGATGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKLINSDLLHSHLQFLPRPGTPA*APRWSC Trigger: ACAAGACCATCGTGGCGCCCATGCTGGAGTCCCGGG...CCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CATACCCAGGAAGGAAGGGTGGCTGAGGTGAAGCACCACAAGCACTCTCAACAGGCTTCTATCTGTACATaGATGAGGTTCTCGACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQEGRVAEVKHHKHSQQASICT*MRFSTS Trigger: GGACGTCGAGAACCTCATCCATGTACAGATAGAAGC...CTGTTGAGAGTGCTTGTGGTGCTTCACCTCAGCCACCCTTCCTTCCTGGGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTAGCTTCCTCTTAAACTaGTGCTCAAAGCGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSLEGTVSREVGGGSASFLLN*CSKRTS Trigger: TGATGTGCGCTTTGAGCATCAGTTTAAGAGGAAGCT...AGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGAGAGTCTGAGACATCTGTTCCTCTGCTTGCTTCACCCTACAGACGATGATGAGCAGAGGCTCTaGGGAGAAGGCTTTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSESLRHLFLCLLHPTDDDEQRL*GEGFQV Trigger: GACTTGAAAGCCTTCTCCGCAGAGCCTCTGCTCATC...ATCGTCTGTAGGGTGAAGCAAGCAGAGGAACAGATGTCTCAGACTCTCACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGTTTCCCCATTCCCAGACACTTGTTACATAGTACAGTTTTCAAGGTCACCCGGGACTCCAGCATaGGCGCCACGATGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVSPFPDTCYIVQFSRSPGTPA*APRWSC Trigger: ACAAGACCATCGTGGCGCCCATGCTGGAGTCCCGGG...TGACCTTGAAAACTGTACTATGTAACAAGTGTCTGGGAATGGGGAAACCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTCCCAAAGGGATCGGCTCCGACAAGCTTCTGTGCTCCTTCCAGGGAAATGAACCAATTTCACCCCTaGTTAAAGGCCTGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPKGSAPTSFCAPSREMNQFHP*LKAWRS Trigger: ACTCCTCCAGGCCTTTAACCAGGGGTGAAATTGGTT...CATTTCCCTGGAAGGAGCACAGAAGCTTGTCGGAGCCGATCCCTTTGGGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGAGAGTCTGAGACATCTGTTCCTCTGCTTGCTTCACCCTACAGACGATATCTGGATGCCTGCTTaGCTGCTGGAGAAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSESLRHLFLCLLHPTDDIWMPA*LLEKAK Trigger: TTTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAGAT...ATCGTCTGTAGGGTGAAGCAAGCAGAGGAACAGATGTCTCAGACTCTCACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCTCCTGCAGTGTCTGGTaGGGCTTCAGAGGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTFKSQTKYRTPKETLGTSCSVW*GFRGMG Trigger: GCCCATCCCTCTGAAGCCCCACCAGACACTGCAGGA...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAACTCATCAACAGTGACTTATTACACTCACACCTGCAGTTCCTCCCCAGGCGGCCTCGACAATCTTaGCCTCGATCTCCTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IKLINSDLLHSHLQFLPRRPRQS*PRSPVR Trigger: ACGAACAGGAGATCGAGGTCAAGATTGTCGAGGCCG...CCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCCGGCCTCGACAATCTTaGCCTCGATCTCCTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLSLHGIIKPRRKHPLCRPRQS*PRSPVR Trigger: ACGAACAGGAGATCGAGGTCAAGATTGTCGAGGCCG...GCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCTGCGGATGTGTCCTTaGTTCCGGGATTTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: APALTPWDNKAKKKTSTLLRMCP*FRDFQE Trigger: CTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAG...CAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | TACGTACTCCATTGGATAATAACCACTGAGCCATCGCTCCAGCTCTCACTCCATAGAAAACCGGGAGTTTaGCCAGTGCTTTGGTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: YVLHWIITTEPSLQLSLHRKPGV*PVLWSD Trigger: ATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCT...ATGGAGTGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAACTCATCAACAGTGACTTATTACACTCACACCTGCAGTTCCTCCCCAGGGGGGCTTCAGAGGGATaGGCAGGTAGCCATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKLINSDLLHSHLQFLPRGASEG*AGSHSV Trigger: AACACTATGGCTACCTGCCCATCCCTCTGAAGCCCC...CCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAATCCTCCTGCAGTGTCTaGTGGGGCTTCAGAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PALTPWDNKAKKKTSTLQSSCSV*WGFRGM Trigger: CATCCCTCTGAAGCCCCACCAGACACTGCAGGAGGA...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR CAA 72 bp | TTCGACCGATGTAATTTGCAGGTGAAATTTCCACCATaGTCCCCAGTGGTCCTCAGGATGTTTCCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FDRCNLQVKFPP*SPVVLRMFPQL Trigger: GAGCTGAGGAAACATCCTGAGGACCACTGGGGACAATGGTGGAAATTTCACCTGCAAATTACATCGGTCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | TGTAATTTGCAGGTGAAATTTCCACCATTGTCCCCAGTGGTCCTCAGGATGTTTCGCAGTTTCATGACGTaGGAAAACCGGGAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CNLQVKFPPLSPVVLRMFRSFMT*ENREFG Trigger: GCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCG...AAACATCCTGAGGACCACTGGGGACAATGGTGGAAATTTCACCTGCAAATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGAGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTGCAGACCACACATTGTGATCAGTGGCTaGCCAGATAGCCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QMSSPLENPDSDEPCRPHIVISG*PDSHPA Trigger: AGCAGGATGGCTATCTGGGCAGCCACTGATCACAAT...GTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACTCATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGTTGCACAGGTACATCTaGATGCCTGCTTGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APALTPWDNKAKKKTSTLLHRYI*MPACLL Trigger: CAGCAGGCAAGCAGGCATCCAGATGTACCTGTGCAA...CAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | GGACCACTTAGATTAGTAAACAAGGTCCACTGGCTTGTCTGTGTTGACTGCTCAACAACTGACACGAACTaGGAAGGCTCCATTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPLRLVNKVHWLVCVDCSTTDTN*EGSIGG Trigger: TCCTCCAATGGAGCCTTCCCAGTTCGTGTCAGTTGT...TGAGCAGTCAACACAGACAAGCCAGTGGACCTTGTTTACTAATCTAAGTGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGAGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTGCAGACCACACGGGCACTGCCTTCTCTaGCTCTTTGACTTGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QMSSPLENPDSDEPCRPHGHCLL*LFDLHS Trigger: AGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCC...GTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACTCATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | CAGATGAGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTGCAGACCACACGTATTGTCCACATTGTaGTCAGTGGCTGCCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QMSSPLENPDSDEPCRPHVLSTL*SVAAQI Trigger: TATCTGGGCAGCCACTGATCACAATGTGGACAATAC...GTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACTCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | TACGTACTCCATTGGATAATAACCACTGAGCCATCGCTCCAGCTCTCACTCCATAGCTTCCTCTTAAACTaGTGCTCAAAGCGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: YVLHWIITTEPSLQLSLHSFLLN*CSKRTS Trigger: TGATGTGCGCTTTGAGCATCAGTTTAAGAGGAAGCT...ATGGAGTGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCTTCTCGACGTCCTCCTaGAGTGTCTGGTGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTHDRAPLNKSPINGLVSFSTSS*SVWWGF Trigger: GAAGCCCCACCAGACACTGCAGGAGGACGTCGAGAA...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | ATCGTTGACTTAAATCTATTGTCTAGGCCAGTGTCTTATATATCCACTGGAGAACCTGTTCGTAGAGTGTaGGCAGCATCCTGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVDLNLLSRPVSYISTGEPVRRV*AASCPA Trigger: GGCGGGACAGGATGCTGCGCACACTCTACGAACAGG...TTCTCCAGTGGATATATAAGACACTGGCCTAGACAATAGATTTAAGTCAACGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | GGACCACTTAGATTAGTAAACAAGGTCCACTGGCTTGTCTGTGTTGACTGCTCAGTTTGGCCAGTGCTTTaGTCCGATTTCATCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPLRLVNKVHWLVCVDCSVWPVL*SDFIRV Trigger: TACCCTGATGAAATCGGACCAAAGCACTGGCCAAAC...TGAGCAGTCAACACAGACAAGCCAGTGGACCTTGTTTACTAATCTAAGTGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAAGTCCCTGGACTCATAATACTCCTTGTACTCAGCCACAGGATGCTTGTGCTTCTATCTGTACATaGATGAGGTTCTCGACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSPWTHNTPCTQPQDACASICT*MRFSTS Trigger: GGACGTCGAGAACCTCATCCATGTACAGATAGAAGC...ACAAGCATCCTGTGGCTGAGTACAAGGAGTATTATGAGTCCAGGGACTTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | GGACCACTTAGATTAGTAAACAAGGTCCACTGGCTTGTCTGTGTTGACTGCTCACGAGATTTACAACATTaGGCACTGCCTTCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLRLVNKVHWLVCVDCSRDLQH*ALPSLA Trigger: AGCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCG...TGAGCAGTCAACACAGACAAGCCAGTGGACCTTGTTTACTAATCTAAGTGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACGTCGCTCAGATAGCCTaGCTGGCCTGTGTAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHVAQIA*LACVVR Trigger: ACGCACTACACAGGCCAGCCAGGCTATCTGAGCGAC...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | AGGCATTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACGCAGTTTCATGACGTaGGAAAACCGGGAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RHSCTHSNHKQNTEHPRRRSFMT*ENREFG Trigger: GCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCG...TCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCAGTTCCCAGTCCAGCTaGGCCTTGTCAATGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTHDRAPLNKSPINGLVSSSQSS*ALSMSS Trigger: GGAGGACATTGACAAGGCTCAGCTGGACTGGGAACT...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGGTTTCCCCATTCCCAGACACTTGTTACATAGTACAGTTTTCAAGGTCAATCTGGATGCCTGCTTaGCTGCTGGAGAAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVSPFPDTCYIVQFSRSIWMPA*LLEKAK Trigger: TTTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAGAT...TGACCTTGAAAACTGTACTATGTAACAAGTGTCTGGGAATGGGGAAACCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAAAGAAAACCGGGAGTTTaGCCAGTGCTTTGGTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PALTPWDNKAKKKTSTLQRKPGV*PVLWSD Trigger: ATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCT...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGGGCTTCAGAGGGATaGGCAGGTAGCCATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLHTFKSQTKYRTPKETLGASEG*AGSHSV Trigger: AACACTATGGCTACCTGCCCATCCCTCTGAAGCCCC...TAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGAACCAATTTCACCCCTaGTTAAAGGCCTGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: APALTPWDNKAKKKTSTLNQFHP*LKAWRS Trigger: ACTCCTCCAGGCCTTTAACCAGGGGTGAAATTGGTT...CAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACAGTGTCCAGGGAAGTTaGCGGTGGAAGTGCTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHSVQGS*RWKCFR Trigger: ACGGAAGCACTTCCACCGCCAACTTCCCTGGACACT...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAAGTATTGTCCACATTGTaGTCAGTGGCTGCCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: PALTPWDNKAKKKTSTLQVLSTL*SVAAQI Trigger: TATCTGGGCAGCCACTGATCACAATGTGGACAATAC...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAACTCATCAACAGTGACTTATTACACTCACACCTGCAGTTCCTCCCCAGGGAACAGGATGTAATCTaGCCATTTTTCCCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKLINSDLLHSHLQFLPREQDVI*PFFPRS Trigger: ACTGCGAGGGAAAAATGGTCAGATTACATCCTGTTC...CCTGGGGAGGAACTGCAGGTGTGAGTGTAATAAGTCACTGTTGATGAGTTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACTCAGAGTTCGTCTCTTaGAGGCACAGTGTCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHSEFVS*RHSVQG Trigger: TCCCTGGACACTGTGCCTTCAAGAGACGAACTCTGA...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR GCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACCGCAGTTCGAAGGGCTaGTTGTCGCAGTTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHRSSKG*LSQFHD Trigger: GTCATGAAACTGCGACAAGCAGCCCTTCGAACTGCG...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAAGTTTGGCCAGTGCTTTaGTCCGATTTCATCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PALTPWDNKAKKKTSTLQVWPVL*SDFIRV Trigger: TACCCTGATGAAATCGGACCAAAGCACTGGCCAAAC...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCGCATGGGCGCCACGATaGTCTTGTTTTCTACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: HTFKSQTKYRTPKETLGTAWAPR*SCFLQS Trigger: TGATTGTAGAAAACAAGACCATCGTGGCGCCCATGC...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACTTGCACAGGTACATCTaGATGCCTGCTTGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHLHRYI*MPACLL Trigger: CAGCAGGCAAGCAGGCATCCAGATGTACCTGTGCAA...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGAGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTGCAGACCACACAGGCTTTCAAGTCCCTaGACTCATAATACTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QMSSPLENPDSDEPCRPHRLSSP*THNTPC Trigger: ACAAGGAGTATTATGAGTCCAGGGACTTGAAAGCCT...GTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACTCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | GCTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGAGTTGTCGACATCTATaGACAGGATGTAATCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: APALTPWDNKAKKKTSTLSCRHL*TGCNLT Trigger: GGTCAGATTACATCCTGTTCATAGATGTCGACAACT...CAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCAGAAGGCAAAAACGATaGTGTCATCAAAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTFKSQTKYRTPKETLGTRRQKR*CHQRSR Trigger: CCTGGACCTTTGATGACATCATCGTTTTTGCCTTCT...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCTTCCAGACAGAGAAGTaGCTAAGGAAGCAACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LQLSLHGIIKPRRKHPLCFQTEK*LRKQPI Trigger: AATTGGTTGCTTCCTTAGTCACTTCTCTGTCTGGAA...GCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | TGTAATTTGCAGGTGAAATTTCCACCATTGTCCCCAGTGGTCCTCAGGATGTTTTTCCAGACAGAGAAGTaGCTAAGGAAGCAACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CNLQVKFPPLSPVVLRMFFQTEK*LRKQPI Trigger: AATTGGTTGCTTCCTTAGTCACTTCTCTGTCTGGAA...AAACATCCTGAGGACCACTGGGGACAATGGTGGAAATTTCACCTGCAAATTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | ATCGTTGACTTAAATCTATTGTCTAGGCCAGTGTCTTATATATCCACTGGAGAAGGATGCCTGCTTGCCTaGTGGAGAAGGCAAAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: IVDLNLLSRPVSYISTGEGCLLA*WRRQKR Trigger: TCGTTTTTGCCTTCTCCAGCAGGCAAGCAGGCATCC...TTCTCCAGTGGATATATAAGACACTGGCCTAGACAATAGATTTAAGTCAACGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACTCTCATTGTCCCAGATaGTTGACGTTTCTGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHSHCPR*LTFLCR Trigger: GCGACACAGAAACGTCAACCATCTGGGACAATGAGA...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACAGAAGGCAAAAACGATaGTGTCATCAAAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHRRQKR*CHQRSR Trigger: CCTGGACCTTTGATGACATCATCGTTTTTGCCTTCT...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTACCTTCTCTGGCTCTTTaGCTTGCATTCTTTTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLHTFKSQTKYRTPKETLPSLAL*LAFFFD Trigger: GTCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGG...TAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR TCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACAGTTGTCGACATCTATaGACAGGATGTAATCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHSCRHL*TGCNLT Trigger: GGTCAGATTACATCCTGTTCATAGATGTCGACAACT...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR GCA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACTCTGGCTCTTTGACTTaGATTCTTTTTCGACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHSGSLT*ILFRPM Trigger: CATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGA...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| 3UTR CAA 72 bp | ACATCCACTTTGCAACAAACTCATGACAGAGCTCCTTaGAATAAAAGCCCAATTAATGGTTTGGTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTLQQTHDRAP*NKSPINGLVSP Trigger: TGGGGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTGTTGCAAAGTGGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| 3UTR CAA 72 bp | TATCTAAATATTATAGCCACATGGCACCTAGACATTTaGATGAACACTCTAGCTGCCATGATGGTCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLNIIATWHLDI*MNTLAAMMVKS Trigger: GCTCTTGACCATCATGGCAGCTAGAGTGTTCATCAAAATGTCTAGGTGCCATGTGGCTATAATATTTAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS GCA 90 bp | GCCGTTCCAGGCAGCCGAGGAAGTAAGGCAGCGTATGCGCAGCGTTaGGGGCGAGAACGACCACGAACACCGTGGGTTTCTGCGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AVPGSRGSKAAYAQR*GRERPRTPWVSAGA Trigger: CGCCCCCGCAGAAACCCACGGTGTTCGTGGTCGTTCTCGCCCGCAACGCTGCGCATACGCTGCCTTACTTCCTCGGCTGCCTGGAACGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS CCA 90 bp | GCAGCGTATGCGCAGCGTTGCGGGCGAGAACGACCACGAACACCGTaGGTTTCTGCGGGGGCGACTCGGGGAACGCCACCGTTTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAYAQRCGRERPRTP*VSAGATRGTPPFPL Trigger: GAGAGGAAACGGTGGCGTTCCCCGAGTCGCCCCCGCAGAAACCCACGGTGTTCGTGGTCGTTCTCGCCCGCAACGCTGCGCATACGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS CCA 90 bp | GGTTCTCGACGTCCTCCTGCAGTGTCTGGTGGGGCTTCAGAGGGATaGGCAGGTAGCCATAGTGTTCCTTGTTGCACAGGTACATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRRPPAVSGGASEG*AGSHSVPCCTGTSG Trigger: TCCAGATGTACCTGTGCAACAAGGAACACTATGGCTACCTGCCCATCCCTCTGAAGCCCCACCAGACACTGCAGGAGGACGTCGAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | CCGTGTTCTTGGCGGTGCTGCGGATGTGTCCTTGCTTCCGGGATTTCCAGGAGTAGTTTGGCCAGTGCTTaGGTCCGATTTCATCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PCSWRCCGCVLASGISRSSLASA*VRFHQG Trigger: ACCCTGATGAAATCGGACCAAAGCACTGGCCAAACT...ACTCCTGGAAATCCCGGAAGCAAGGACACATCCGCAGCACCGCCAAGAACACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS TCA 90 bp | GCTCCATTGGAGGATGGTCAATCATTGCTTCTATCTGTACATGGATaGGGTTCTCGACGTCCTCCTGCAGTGTCTGGTGGGGCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: APLEDGQSLLLSVHG*GSRRPPAVSGGASE Trigger: CTCTGAAGCCCCACCAGACACTGCAGGAGGACGTCGAGAACCTCATCCATGTACAGATAGAAGCAATGATTGACCATCCTCCAATGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS CCA 90 bp | AAGGGCTGCTTGTCGCAGTTTCATGACGTGAGAAAACCGGGAGTTTaGCCAGTGCTTTGGTCCGATTTCATCAGGGTAAGACTCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGCLSQFHDVRKPGV*PVLWSDFIRVRLWL Trigger: GAGCCAGAGTCTTACCCTGATGAAATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCGACAAGCAGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS CCA 90 bp | GAAGGCTCCATTGGAGGATGGTCAATCATTGCTTCTATCTGTACATaGATGAGGTTCTCGACGTCCTCCTGCAGTGTCTGGTGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGSIGGWSIIASICT*MRFSTSSCSVWWGF Trigger: GAAGCCCCACCAGACACTGCAGGAGGACGTCGAGAACCTCATCCATGTACAGATAGAAGCAATGATTGACCATCCTCCAATGGAGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 90 bp | TTTTCCCTCGCAGTTCGAAGGGCTGCTTGTCGCAGTTTCATGACGTaGGAAAACCGGGAGTTTGGCCAGTGCTTTGGTCCGATTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FSLAVRRAACRSFMT*ENREFGQCFGPISS Trigger: TGATGAAATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCGACAAGCAGCCCTTCGAACTGCGAGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS TCA 90 bp | ACCATTTTTCCCTCGCAGTTCGAAGGGCTGCTTGTCGCAGTTTCATaGCGTGAGAAAACCGGGAGTTTGGCCAGTGCTTTGGTCCGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TIFPSQFEGLLVAVS*REKTGSLASALVRF Trigger: AAATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCGACAAGCAGCCCTTCGAACTGCGAGGGAAAAATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS CCA 90 bp | TCGCAGTTTCATGACGTGAGAAAACCGGGAGTTTGGCCAGTGCTTTaGTCCGATTTCATCAGGGTAAGACTCTGGCTCGTTCATAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQFHDVRKPGVWPVL*SDFIRVRLWLVHRP Trigger: AGGCCTATGAACGAGCCAGAGTCTTACCCTGATGAAATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTGAGAGTCTGAGACATCTGTTCCTCTGCTTGCTTCACCCTACAGACGATAGTTCGAAGGGCTGCTaGTCGCAGTTTCATGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSESLRHLFLCLLHPTDDSSKGC*SQFHDV Trigger: CACGTCATGAAACTGCGACAAGCAGCCCTTCGAACT...ATCGTCTGTAGGGTGAAGCAAGCAGAGGAACAGATGTCTCAGACTCTCACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTCCGGATTAGTCAGGAAGTaGTCGACATCTATGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLEGTVSREVGGGSASGLVRK*STSMNR Trigger: CCTGTTCATAGATGTCGACAACTTCCTGACTAATCC...GGAAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | CATACCCAGGAAGGAAGGGTGGCTGAGGTGAAGCACCACAAGCACTCTCAACAGTTCCTGCGTTTGAGGTaGATCATGAAAATCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HTQEGRVAEVKHHKHSQQFLRLR*IMKISS Trigger: TGATGAGATTTTCATGATCAACCTCAAACGCAGGAA...CTGTTGAGAGTGCTTGTGGTGCTTCACCTCAGCCACCCTTCCTTCCTGGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGTTCAGCTGGCTTGTGTaGAGTGCCTTCCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: APALTPWDNKAKKKTSTLFSWLV*SAFPST Trigger: CGTGGATGGGAAGGCACTCAACACAAGCCAGCTGAA...CAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 90 bp | ACTCCACATAGTGATACAAACGCTGCACACTTTTCAGCCACTCCCTaGGTATTTCCGTTGTATTGTCCACATTGTGATCAGTGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TPHSDTNAAHFSATP*VFPLYCPHCDQWLP Trigger: GGGCAGCCACTGATCACAATGTGGACAATACAACGGAAATACTCAGGGAGTGGCTGAAAAGTGTGCAGCGTTTGTATCACTATGTGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS-3UTR CAA 90 bp | GGTTTGGTTTCCCCATTCCCAGACACTTGTTACATAGTACAGTTTTCAAGGTCAGAGAAAACCGGGAGTTaGGCCAGTGCTTTGGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLVSPFPDTCYIVQFSRSEKTGS*ASALVR Trigger: TCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTC...TGACCTTGAAAACTGTACTATGTAACAAGTGTCTGGGAATGGGGAAACCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS-3UTR CAA 90 bp | TACGTACTCCATTGGATAATAACCACTGAGCCATCGCTCCAGCTCTCACTCCATGGCGCCACGATGGTCTaGTTTTCTACAATCATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: YVLHWIITTEPSLQLSLHGATMV*FSTIIR Trigger: CCTAATGATTGTAGAAAACAAGACCATCGTGGCGCC...ATGGAGTGAGAGCTGGAGCGATGGCTCAGTGGTTATTATCCAATGGAGTACGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGCTTCGACGAGATTTACAACATTGGGCACTGCCTTCTCTGGCTCTTTGACGGCGCCACGATGGTCTaGTTTTCTACAATCATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISFDEIYNIGHCLLWLFDGATMV*FSTIIR Trigger: CCTAATGATTGTAGAAAACAAGACCATCGTGGCGCC...GTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCGTCGAAGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAACATCTGGATGCCTGCTaGCCTGCTGGAGAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PALTPWDNKAKKKTSTLQHLDAC*PAGEGK Trigger: TTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAGATG...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCGTCTCTTGAAGGCACAGTGTCCAGGGAAGTTGGCGGTGGAAGTGCTTTTCCTGCGTTTGAGGTaGATCATGAAAATCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RVRLLKAQCPGKLAVEVLFLRLR*IMKISS Trigger: TGATGAGATTTTCATGATCAACCTCAAACGCAGGAA...AAGCACTTCCACCGCCAACTTCCCTGGACACTGTGCCTTCAAGAGACGAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAATTCAGCTGGCTTGTGTaGAGTGCCTTCCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PALTPWDNKAKKKTSTLQFSWLV*SAFPST Trigger: CGTGGATGGGAAGGCACTCAACACAAGCCAGCTGAA...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGAACGGCCTCGACAATCTaGACCTCGATCTCCTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RHSCTHSNHKQNTEHPRRTASTI*TSISCS Trigger: CGAACAGGAGATCGAGGTCAAGATTGTCGAGGCCGT...TCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CAA 90 bp | CAGATGAGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTGCAGACCACACGCCACAGGATGCTTGTaGTACATGATTGGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QMSSPLENPDSDEPCRPHATGCL*YMIGRN Trigger: GTTTCTGCCAATCATGTACAACAAGCATCCTGTGGC...GTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACTCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS CCA 90 bp | TCAAATCCCATCTTGTCTGGATACTTAGGGACAACTGACACGAACTaGGAAGGCTCCATTGGAGGATGGTCAATCATTGCTTCTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNPILSGYLGTTDTN*EGSIGGWSIIASIC Trigger: ACAGATAGAAGCAATGATTGACCATCCTCCAATGGAGCCTTCCCAGTTCGTGTCAGTTGTCCCTAAGTATCCAGACAAGATGGGATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | CACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGGAACCAGTTTGGCCAGTGCTTaGGTCCGATTTCATCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HTFKSQTKYRTPKETLGTSLASA*VRFHQG Trigger: ACCCTGATGAAATCGGACCAAAGCACTGGCCAAACT...GGTTCCTAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CAA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCGAGAAAACCGGGAGTTaGGCCAGTGCTTTGGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QTHDRAPLNKSPINGLVSEKTGS*ASALVR Trigger: TCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTC...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTACATCTGGATGCCTGCTaGCCTGCTGGAGAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLHTFKSQTKYRTPKETLHLDAC*PAGEGK Trigger: TTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAGATG...TAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
||
| CDS-3UTR CAA 90 bp | GGACCACTTAGATTAGTAAACAAGGTCCACTGGCTTGTCTGTGTTGACTGCTCACTGTCCTTCCTGCGTTaGAGGTTGATCATGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: GPLRLVNKVHWLVCVDCSLSFLR*RLIMKI Trigger: GATTTTCATGATCAACCTCAAACGCAGGAAGGACAG...TGAGCAGTCAACACAGACAAGCCAGTGGACCTTGTTTACTAATCTAAGTGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGAGTAGCCCTTTAGAAAATCCAGACAGTGATGAACCTTGCAGACCACACCTGTCCTTCCTGCGTTaGAGGTTGATCATGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: QMSSPLENPDSDEPCRPHLSFLR*RLIMKI Trigger: GATTTTCATGATCAACCTCAAACGCAGGAAGGACAG...GTGTGGTCTGCAAGGTTCATCACTGTCTGGATTTTCTAAAGGGCTACTCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS-3UTR CAA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCACGGCCTCGACAATCTaGACCTCGATCTCCTGTTCG | + |
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Preference number: 5 (lower is better) Translates to: QTHDRAPLNKSPINGLVSTASTI*TSISCS Trigger: CGAACAGGAGATCGAGGTCAAGATTGTCGAGGCCGT...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 90 bp | CTTCGACGAGATTTACAACATTGGGCACTGCCTTCTCTGGCTCTTTaGCTTGCATTCTTTTTCGACCGATGTAAATTAGTTCCCAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LRRDLQHWALPSLAL*LAFFFDRCKLVPSP Trigger: TGGACTGGGAACTAATTTACATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTAAATCTCGTCGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| CDS-3UTR CAA 90 bp | TTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACCTTAGTGGCCACTGTCTCATaGTCCCAGATGGTTGACGTT | + |
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Preference number: 5 (lower is better) Translates to: FLHTFKSQTKYRTPKETLVATVS*SQMVDV Trigger: AACGTCAACCATCTGGGACAATGAGACAGTGGCCAC...TAAGGTCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| CDS-3UTR CAA 90 bp | GCTCCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGTCATCAAATCCCATCTaGTCTGGATACTTAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: APALTPWDNKAKKKTSTLSSNPI*SGYLGT Trigger: TGTCCCTAAGTATCCAGACAAGATGGGATTTGATGA...CAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS-3UTR CAA 90 bp | CCAGCTCTCACTCCATGGGATAATAAAGCCAAGAAGAAAACATCCACTTTGCAAGCCTTCTCTGGCTCTTaGACTTGCATTCTTTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: PALTPWDNKAKKKTSTLQAFSGS*TCILFR Trigger: TCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGGC...TTGCAAAGTGGATGTTTTCTTCTTGGCTTTATTATCCCATGGAGTGAGAGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| CDS-3UTR CAA 90 bp | CTGACCCTCAACAGTGACTTATTAAACTCATCAACAGTGACTTATTACACTCACCATTGTCCCAGATGGTaGACGTTTCTGTGTCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LTLNSDLLNSSTVTYYTHHCPRW*TFLCRS Trigger: TGAGCGACACAGAAACGTCAACCATCTGGGACAATG...GTGAGTGTAATAAGTCACTGTTGATGAGTTTAATAAGTCACTGTTGAGGGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| CDS-3UTR CAA 90 bp | AGGCATTCTTGCACACATTCAAATCACAAACAAAATACCGAACACCCAAGGAGACTCTGGCTCTTTGACTaGCATTCTTTTTCGACCGAT | + |
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Preference number: 5 (lower is better) Translates to: RHSCTHSNHKQNTEHPRRLWLFD*HSFSTD Trigger: ATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGAG...TCTCCTTGGGTGTTCGGTATTTTGTTTGTGATTTGAATGTGTGCAAGAATGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| CDS-3UTR CAA 90 bp | CAAACTCATGACAGAGCTCCTTTGAATAAAAGCCCAATTAATGGTTTGGTTTCCGGATTAGTCAGGAAGTaGTCGACATCTATGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: QTHDRAPLNKSPINGLVSGLVRK*STSMNR Trigger: CCTGTTCATAGATGTCGACAACTTCCTGACTAATCC...GGAAACCAAACCATTAATTGGGCTTTTATTCAAAGGAGCTCTGTCATGAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS-3UTR CAA 90 bp | ATCGTTGACTTAAATCTATTGTCTAGGCCAGTGTCTTATATATCCACTGGAGAATCATCAAATCCCATCTaGTCTGGATACTTAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: IVDLNLLSRPVSYISTGESSNPI*SGYLGT Trigger: TGTCCCTAAGTATCCAGACAAGATGGGATTTGATGA...TTCTCCAGTGGATATATAAGACACTGGCCTAGACAATAGATTTAAGTCAACGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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| CDS CCA 72 bp | GCGCAGCGTTGCGGGCGAGAACGACCACGAACACCGTaGGTTTCTGCGGGGGCGACTCGGGGAACGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: AQRCGRERPRTP*VSAGATRGTPP Trigger: CGGTGGCGTTCCCCGAGTCGCCCCCGCAGAAACCCACGGTGTTCGTGGTCGTTCTCGCCCGCAACGCTGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS GCA 72 bp | GGCAGCCGAGGAAGTAAGGCAGCGTATGCGCAGCGTTaGGGGCGAGAACGACCACGAACACCGTGGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSRGSKAAYAQR*GRERPRTPWVS Trigger: AGAAACCCACGGTGTTCGTGGTCGTTCTCGCCCGCAACGCTGCGCATACGCTGCCTTACTTCCTCGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS CCA 72 bp | CGTCCTCCTGCAGTGTCTGGTGGGGCTTCAGAGGGATaGGCAGGTAGCCATAGTGTTCCTTGTTGCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: RPPAVSGGASEG*AGSHSVPCCTG Trigger: ACCTGTGCAACAAGGAACACTATGGCTACCTGCCCATCCCTCTGAAGCCCCACCAGACACTGCAGGAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 72 bp | GCAGTTCGAAGGGCTGCTTGTCGCAGTTTCATGACGTaGGAAAACCGGGAGTTTGGCCAGTGCTTTGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: AVRRAACRSFMT*ENREFGQCFGP Trigger: CGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCGACAAGCAGCCCTTCGAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 72 bp | CCCTCGCAGTTCGAAGGGCTGCTTGTCGCAGTTTCATaGCGTGAGAAAACCGGGAGTTTGGCCAGTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PSQFEGLLVAVS*REKTGSLASAL Trigger: CAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCGACAAGCAGCCCTTCGAACTGCGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS GCA 72 bp | TCAGAGGGATGGGCAGGTAGCCATAGTGTTCCTTGTTaGACAGGTACATCTGGATGCCTGCTTGCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SEGWAGSHSVPC*TGTSGCLLACW Trigger: CCAGCAGGCAAGCAGGCATCCAGATGTACCTGTGCAACAAGGAACACTATGGCTACCTGCCCATCCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 72 bp | GAGGATGGTCAATCATTGCTTCTATCTGTACATGGATaGGGTTCTCGACGTCCTCCTGCAGTGTCTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EDGQSLLLSVHG*GSRRPPAVSGG Trigger: CCCACCAGACACTGCAGGAGGACGTCGAGAACCTCATCCATGTACAGATAGAAGCAATGATTGACCATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS CCA 72 bp | CATGACGTGAGAAAACCGGGAGTTTGGCCAGTGCTTTaGTCCGATTTCATCAGGGTAAGACTCTGGCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: HDVRKPGVWPVL*SDFIRVRLWLV Trigger: AACGAGCCAGAGTCTTACCCTGATGAAATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 72 bp | ATCAAATCCCATCTTGTCTGGATACTTAGGGACAACTaGCACGAACTGGGAAGGCTCCATTGGAGGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: IKSHLVWILRDN*HELGRLHWRMV Trigger: GACCATCCTCCAATGGAGCCTTCCCAGTTCGTGTCAGTTGTCCCTAAGTATCCAGACAAGATGGGATTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS CCA 72 bp | TTGTCGCAGTTTCATGACGTGAGAAAACCGGGAGTTTaGCCAGTGCTTTGGTCCGATTTCATCAGGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LSQFHDVRKPGV*PVLWSDFIRVR Trigger: TCTTACCCTGATGAAATCGGACCAAAGCACTGGCCAAACTCCCGGTTTTCTCACGTCATGAAACTGCGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS CCA 72 bp | ATCTTGTCTGGATACTTAGGGACAACTGACACGAACTaGGAAGGCTCCATTGGAGGATGGTCAATCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: ILSGYLGTTDTN*EGSIGGWSIIA Trigger: AGCAATGATTGACCATCCTCCAATGGAGCCTTCCCAGTTCGTGTCAGTTGTCCCTAAGTATCCAGACAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 72 bp | AGTGATACAAACGCTGCACACTTTTCAGCCACTCCCTaGGTATTTCCGTTGTATTGTCCACATTGTGATCAG | + |
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Preference number: 6 (lower is better) Translates to: SDTNAAHFSATP*VFPLYCPHCDQ Trigger: CTGATCACAATGTGGACAATACAACGGAAATACTCAGGGAGTGGCTGAAAAGTGTGCAGCGTTTGTATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044311.9 ENSMUST00000127586.8 |
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| CDS TCA 72 bp | GATTTACAACATTGGGCACTGCCTTCTCTGGCTCTTTaGCTTGCATTCTTTTTCGACCGATGTAAATTAGTT | + |
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Preference number: 6 (lower is better) Translates to: DLQHWALPSLAL*LAFFFDRCKLV Trigger: AACTAATTTACATCGGTCGAAAAAGAATGCAAGTCAAAGAGCCAGAGAAGGCAGTGCCCAATGTTGTAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044311.9 |
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