Pregenerated sensors for COLGALT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034807Ensembl transcript IDs: ENSMUST00000047903.10
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGGCACCTCAAGGCCCCAAACATATGAGCAGCCAAGGGACACCTaGGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: VGTSRPQTYEQPRDT*DTRAERSSGSKGWA Trigger: TGCCCACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCTGCTCATATGTTTGGGGCCTTGAGGTGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR CCA 90 bp | GGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATaGTGGACCCAACTGACTGTGCTTGTTCCTGACCAATCTCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GNHASFIALTRELPS*WTQLTVLVPDQSLG Trigger: ACCAAGAGATTGGTCAGGAACAAGCACAGTCAGTTGGGTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR CCA 90 bp | AATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTaGACCCAACTGACTGTGCTTGTTCCTGACCAATCTCTTGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: NHASFIALTRELPSW*TQLTVLVPDQSLGG Trigger: ACCACCAAGAGATTGGTCAGGAACAAGCACAGTCAGTTGGGTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR GCA 90 bp | GATGATCAGTTCATCACTGATAAGGGGGAATCATGCCTCTTTCATTaGTCTAACAAGAGAACTTCCTTCATGGTGGACCCAACTGACTGT | + |
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Preference number: 1 (lower is better) Translates to: DDQFITDKGESCLFH*SNKRTSFMVDPTDC Trigger: ACAGTCAGTTGGGTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGATGAACTGATCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTAAAGGCCCCAAACATATaGGCAGCCAAGGGACACCTG | + |
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Preference number: 2 (lower is better) Translates to: MSKLPRPEQASSHPKKMVKAPNI*AAKGHL Trigger: CAGGTGTCCCTTGGCTGCTCATATGTTTGGGGCCTT...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACTCCGGCAGACAGGTTaGAGGGTGGCTATTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: MSKLPRPEQASSHPKKMVLRQTG*RVAISQ Trigger: TTGAGAAATAGCCACCCTCCAACCTGTCTGCCGGAG...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR TCA 90 bp | GTCATGAGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCTGGGAGTCAAAGGCCTaGTACTCTAGGTGCTCAATA | + |
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Preference number: 2 (lower is better) Translates to: VMSILEPSSQPREGEQCSWESKA*YSRCSI Trigger: TATTGAGCACCTAGAGTATCAGGCCTTTGACTCCCA...GGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR TCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTCATGGTGGACCCAACTaGCTGTGCTTGTTCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: SLIRGNHASFIALTRELPHGGPN*LCLFLT Trigger: GGTCAGGAACAAGCACAGTCAGTTGGGTCCACCATG...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTAATCTCCAGCACCTACTaGGTGACACATAGTAGACAC | + |
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Preference number: 2 (lower is better) Translates to: MSKLPRPEQASSHPKKMVISSTY*VTHSRH Trigger: GTGTCTACTATGTGTCACTCAGTAGGTGCTGGAGAT...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR GCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGCACTTAACTCATCAGTaGTTCCTAAGACCTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: LEPSSQPREGEQCSLLDKHLTHQ*FLRPGT Trigger: TGTGCCAGGTCTTAGGAAGCACTGATGAGTTAAGTG...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTAGAACTTCCTTCATGGTaGACCCAACTGACTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: MSKLPRPEQASSHPKKMVELPSW*TQLTVL Trigger: AAGCACAGTCAGTTGGGTCCACCATGAAGGAAGTTC...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR TCA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTTGTATCCCTAATACCTaGCTCAGTCTGAACAATAAA | + |
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Preference number: 2 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSCIPNT*LSLNNK Trigger: TTTATTGTTCAGACTGAGTCAGGTATTAGGGATACA...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR CCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTGTTGTCTGCCTGAGTaGCCCTATAGTCCCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: SLIRGNHASFIALTRELPCCLPE*PYSPRQ Trigger: TTGCCTGGGACTATAGGGCCACTCAGGCAGACAACA...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTAGGTCAGCCCTATTTCTaGCATACAGTAAGTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: MSKLPRPEQASSHPKKMVGQPYF*HTVSTP Trigger: TGGAGTACTTACTGTATGCCAGAAATAGGGCTGACC...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR GCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGTCATGCCTCTTTCATTaGTCTAACAAGAGAACTTCC | + |
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Preference number: 2 (lower is better) Translates to: LEPSSQPREGEQCSLLDKSCLFH*SNKRTS Trigger: GGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGA...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGCACATAGCAGCTGCTTaGTATATTTTGCTTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: LEPSSQPREGEQCSLLDKHIAAA*YILLDF Trigger: AAAATCAAGCAAAATATACCAAGCAGCTGCTATGTG...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR CCA 72 bp | ACACTGCTCAGGCCAAGAGGAGCACCCCAATACAGGTaGGCACCTCAAGGCCCCAAACATATGAGCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: TLLRPRGAPQYR*APQGPKHMSSQ Trigger: TTGGCTGCTCATATGTTTGGGGCCTTGAGGTGCCCACCTGTATTGGGGTGCTCCTCTTGGCCTGAGCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR TCA 72 bp | CCCAATACAGGTGGGCACCTCAAGGCCCCAAACATATaGGCAGCCAAGGGACACCTGAGATACAAGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: PNTGGHLKAPNI*AAKGHLRYKGR Trigger: TCTGCCCTTGTATCTCAGGTGTCCCTTGGCTGCTCATATGTTTGGGGCCTTGAGGTGCCCACCTGTATTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR GCA 72 bp | ATGGAGACCTCTGTGCTTGTAGAGCTCTCTGTTGTCTaGCTGAGTGGCCCTATAGTCCCAGGCAAGCACATG | + |
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Preference number: 3 (lower is better) Translates to: METSVLVELSVV*LSGPIVPGKHM Trigger: CATGTGCTTGCCTGGGACTATAGGGCCACTCAGGCAGACAACAGAGAGCTCTACAAGCACAGAGGTCTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR GCA 72 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATaGTCCCTTCTAGACAAGGGAAGCCCAGTGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LEPSSQPREGEQ*SLLDKGSPVSS Trigger: GGAGGACACTGGGCTTCCCTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR TCA 72 bp | TCAAGGCCCCAAACATATGAGCAGCCAAGGGACACCTaGGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: SRPQTYEQPRDT*DTRAERSSGSK Trigger: CTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCTGCTCATATGTTTGGGGCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR TCA 72 bp | ATAAGCACCACTGGGACATCCATCTCCAGCACCTACTaGGTGACACATAGTAGACACTTAACTCATCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: ISTTGTSISSTY*VTHSRHLTHQC Trigger: GCACTGATGAGTTAAGTGTCTACTATGTGTCACTCAGTAGGTGCTGGAGATGGATGTCCCAGTGGTGCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR CCA 72 bp | GCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATaGTGGACCCAACTGACTGTGCTTGTTCCTGACCAA | + |
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Preference number: 3 (lower is better) Translates to: ASFIALTRELPS*WTQLTVLVPDQ Trigger: TTGGTCAGGAACAAGCACAGTCAGTTGGGTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR GCA 72 bp | TTCATCACTGATAAGGGGGAATCATGCCTCTTTCATTaGTCTAACAAGAGAACTTCCTTCATGGTGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: FITDKGESCLFH*SNKRTSFMVDP Trigger: TGGGTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR GCA 72 bp | ACTGATGATCAGTTCATCACTGATAAGGGGGAATCATaGCTCTTTCATTGCTCTAACAAGAGAACTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: TDDQFITDKGES*LFHCSNKRTSF Trigger: GAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGATGAACTGATCATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | AGCCAAGGGACACCTGAGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTTCAGGGTGCTCCACCTaGATGCGCTTCCGGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: SQGTPEIQGQREALEVRGSGCST*MRFRPT Trigger: CGTGGGCCGGAAGCGCATGCAGGTGGAGCACCCTGA...ACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACGCGCCAGCAGCGCGATaGGCACGCGCGGCGCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDAPAAR*ARAAPV Trigger: TACAGGCGCCGCGCGTGCTCATCGCGCTGCTGGCGC...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGGTAGTGCCCGCAGCATaGGTTCTCGCCGGTCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKVVPAA*VLAGPA Trigger: GGCGGGACCGGCGAGAACGCATGCTGCGGGCACTAC...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGCCAGCTCTCCCTTGGTaGGTGGCCGCCCATGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKPALPW*VAAHGR Trigger: CCTACCATGGGCGGCCACTCACCAAGGGAGAGCTGG...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGTCCGGCCCACGTAGATaGGGTCCCAGTCCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKSGPRR*GPSPAP Trigger: AGGGGCTGGACTGGGACCTCATCTACGTGGGCCGGA...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | AGCCAAGGGACACCTGAGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTCAGGCAGCATCTGGATaGCCATGGCTTCCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SQGTPEIQGQREALEVRGQAASG*PWLPPG Trigger: GCCAGGTGGAAGCCATGGGCATCCAGATGCTGCCTG...ACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTCCAGCTGCACGTGCATaGAGCTCTCTGCTTCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSPAARA*SSLLRP Trigger: AGGACGAAGCAGAGAGCTTCATGCACGTGCAGCTGG...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTGGCCTCACGGCTCAGTaGTTGCTGTTCCCGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSGLTAQ*LLFPHL Trigger: AAGATGCGGGAACAGCAAGCACTGAGCCGTGAGGCC...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGCTCTCCCTTGGTGAGTaGCCGCCCATGGTAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKLSLGE*PPMVGV Trigger: GACCCCTACCATGGGCGGCCACTCACCAAGGGAGAG...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | AGCCAAGGGACACCTGAGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTAGACTGGAGCACATCTaGGTTCTTGGCCTCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: SQGTPEIQGQREALEVRGRLEHI*VLGLTA Trigger: AGCCGTGAGGCCAAGAACTCAGATGTGCTCCAGTCT...ACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | AGTGGCCCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTGGATATAGGCAGGGGTaGGCTTGTAGTAGCCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: SGPIVPGKHMKFRCVAVAGYRQG*ACSSPA Trigger: CGCAGGGCTACTACAAGCGCACCCCTGCCTATATCC...AGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGGGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACGCTCCAGCGCTCCTCTaGAAAGTAGCCGTCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDAPALL*KVAVRA Trigger: GGCGCGGACGGCTACTTTCCAGAGGAGCGCTGGAGC...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | AGCCAAGGGACACCTGAGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTGCATCTTCTGGGACTTaGCTCGGTCCCAGTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SQGTPEIQGQREALEVRGASSGT*LGPSQS Trigger: AGACTGACTGGGACCGAGCCAAGTCCCAGAAGATGC...ACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | AGCCAAGGGACACCTGAGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTCTTGGCGCAGTTTCATaGCATGCTCGTAGCGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SQGTPEIQGQREALEVRGLGAVS*HARSGN Trigger: ATTCCCGCTACGAGCATGTCATGAAACTGCGCCAAG...ACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCCTGCAGGCTGCTGTaGGCACGCAGTGGCACGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLIRGNHASFIALTRELPSCRLL*ARSGTG Trigger: GCCCGTGCCACTGCGTGCGCACAGCAGCCTGCAGGA...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGGCTCATCACGGGCAGTaGTGTCCAGTGGAGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKAHHGQ*CPVETG Trigger: TCCAGTCTCCACTGGACAGCACTGCCCGTGATGAGC...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | AGCCAAGGGACACCTGAGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTCCTGGCTGGTGTTCATaGCTTTGCCATCTACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SQGTPEIQGQREALEVRGPGWCS*LCHLQP Trigger: AGGCTGTAGATGGCAAAGCCATGAACACCAGCCAGG...ACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTTGGCTTCCACCTGGCTaGTGTTCATGGCTTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSWLPPG*CSWLCH Trigger: ATGGCAAAGCCATGAACACCAGCCAGGTGGAAGCCA...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | CCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTTTGGCTGCATCTGGATGCCCATaGCTTCCACCTGGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PIVPGKHMKFRCVAVALAASGCP*LPPGWC Trigger: ACACCAGCCAGGTGGAAGCCATGGGCATCCAGATGC...AGCCAAAGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGTGTTCCCGCATCTTCTaGGACTTGGCTCGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKCSRIF*DLARSQ Trigger: CTGGGACCGAGCCAAGTCCCAGAAGATGCGGGAACA...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | AGTGGCCCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTAGATGTTGTAGTGGCTaGGAAAGCAGCCCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGPIVPGKHMKFRCVAVARCCSG*ESSPAL Trigger: GAGAGCTGGGCTGCTTTCTCAGCCACTACAACATCT...AGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGGGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | GTCATGAGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCGCTCCACATCCCGCATaGGGTTCATCAGACGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMSILEPSSQPREGEQCSAPHPA*GSSDVS Trigger: AGAGACGTCTGATGAACCTCATGCGGGATGTGGAGC...GGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACTCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGACAGCCTTTTCAGGGTaGTCCACCTGCATGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKTAFSG*STCMRF Trigger: GAAGCGCATGCAGGTGGAGCACCCTGAAAAGGCTGT...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTAGTGTTGTCAGTGTTGTaGTCTGTGGCCACCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSKLPRPEQASSHPKKMVVLSVL*SVATHS Trigger: GCTGTGGGTGGCCACAGATCACAACACTGACAACAC...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTATCTTGTTCTCAGCGATaGGCAGGCTCAGAGTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MSKLPRPEQASSHPKKMVSCSQR*AGSECR Trigger: CCGACACTCTGAGCCTGCTCATCGCTGAGAACAAGA...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | AGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAAGTCTTCCTGGGTGCTaGGATGAATCGGGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SILEPSSQPREGEQCSLLSLPGC*DESGEL Trigger: CAGCTCTCCCGATTCATCTCAGCACCCAGGAAGACT...TAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR GCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACCTGCAAAGCAGCCCCTaGGGTCTCGTTTTCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDLQSSP*GLVFGW Trigger: CCATCCGAAAACGAGACCGCAGGGGCTGCTTTGCAG...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAGACAAGACCATGACCTCCAGCTaGACGTGCATGAAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEPSSQPREGEQCSLLDKTMTSS*TCMKLS Trigger: AGAGAGCTTCATGCACGTGCAGCTGGAGGTCATGGT...CTTGTCTAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTTTGGCTCGCCACTCCACAGAGTaGTATAAACCCTTCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIVPGKHMKFRCVAVALARHSTE*YKPFTA Trigger: GGCAGTGAAGGGTTTATACCACTCTGTGGAGTGGCG...AGCCAAAGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR CCA 90 bp | AGTGGCCCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTGACTTCAAGGCTGCTTaGCGCAGTTTCATGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPIVPGKHMKFRCVAVADFKAA*RSFMTC Trigger: GCATGTCATGAAACTGCGCCAAGCAGCCTTGAAGTC...AGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGGGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTAGGTCTCGTTTTCGGATaGGGATATAGGCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MSKLPRPEQASSHPKKMVGLVFG*GYRQGC Trigger: GCACCCCTGCCTATATCCCCATCCGAAAACGAGACC...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTTTGGCTGGAGAGCTGCACTGGTaGATGTTTCACCATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PIVPGKHMKFRCVAVALAGELHW*MFHHDL Trigger: GAGGTCATGGTGAAACATCCACCAGTGCAGCTCTCC...AGCCAAAGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR TCA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTTTGCGGGGAGAGAAGTaGCTCTTGTATTCTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSLRGEK*LLYSDI Trigger: AATGTCAGAATACAAGAGTCACTTCTCTCCCCGCAA...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR GCA 90 bp | AGTGGCCCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTGTACATTTGCACCTCTaGCTGTTTACAGGAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPIVPGKHMKFRCVAVAVHLHL*LFTGEG Trigger: GCCTTCTCCTGTAAACAGGCAGAGGTGCAAATGTAC...AGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGGGCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR GCA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTTTGCACACGTACATTTaGACCTCTGCCTGTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSLHTYI*TSACLQ Trigger: CTGTAAACAGGCAGAGGTGCAAATGTACGTGTGCAA...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR GCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACACCTCCAGCTGCACGTaGATGAAGCTCTCTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDTSSCT*MKLSAS Trigger: CGAAGCAGAGAGCTTCATGCACGTGCAGCTGGAGGT...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACTCACGGCTCAGTGCTTaGTGTTCCCGCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDSRLSA*CSRIFW Trigger: CCAGAAGATGCGGGAACAGCAAGCACTGAGCCGTGA...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTAAATCGGACCAGTGTTTaGGGCCTTCTTCGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSKLPRPEQASSHPKKMVNRTSV*GLLRLG Trigger: ACCCAGACGAAGAAGGCCCCAAACACTGGTCCGATT...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTCTCGGGAGTCCAGCATaGGGGCCACCACTGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLIRGNHASFIALTRELPLGSPA*GPPLSC Trigger: ACAAGACAGTGGTGGCCCCCATGCTGGACTCCCGAG...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACTCCCACACCAGAAGTTaGAGTATGCCGCTCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDSHTRS*SMPLGS Trigger: ACTCCCGAGCGGCATACTCCAACTTCTGGTGTGGGA...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | GTCATGAGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCGTAGTCTGGGTGTGTTaGGTAAAAGGCCAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VMSILEPSSQPREGEQCSVVWVC*VKGQVP Trigger: AGGAACCTGGCCTTTTACCCAACACACCCAGACTAC...GGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACTCATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR CAA 72 bp | AAGAAGATGGTACCCACTGTCCAGTTGACAGTCAATTaGGTTTTGAAGGGACAGCAACACCCTGGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKMVPTVQLTVN*VLKGQQHPGLL Trigger: CAGCAGGCCAGGGTGTTGCTGTCCCTTCAAAACCAAATTGACTGTCAACTGGACAGTGGGTACCATCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | GTCATGAGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTCTCGAAGTATGGCTaGAGTGTTGTCAGTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VMSILEPSSQPREGEQCSLSKYG*SVVSVV Trigger: CACAACACTGACAACACTTCAGCCATACTTCGAGAG...GGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | GTCATGAGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCATGAGGAAGGTAGAGTaGACCATGGGAACTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VMSILEPSSQPREGEQCSMRKVE*TMGTAK Trigger: CTTTGCAGTTCCCATGGTGCACTCTACCTTCCTCAT...GGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | AGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCCTTCTAAGACCAGGTGTAGTCTaGGTGTGTTGGGTAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SILEPSSQPREGEQCSLLRPGVV*VCWVKG Trigger: GCCTTTTACCCAACACACCCAGACTACACCTGGTCT...TAGAAGGGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | AGTGGCCCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTTCATCAGACGTCTCTTaGAGAAGATCTCAAAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPIVPGKHMKFRCVAVASSDVS*RRSQNA Trigger: TGCGTTTTGAGATCTTCTTCAAGAGACGTCTGATGA...AGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGGGCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTGGCCAGGTTCCTGGATaGAGCCTTACGCAGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLIRGNHASFIALTRELPGQVPG*SLTQVN Trigger: ATTGACCTGCGTAAGGCTGCATCCAGGAACCTGGCC...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR GCA 90 bp | AGTGGCCCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTTATTCTGACATTGGGTaGTTGTCAAACATGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPIVPGKHMKFRCVAVAYSDIG*LSNMTG Trigger: GCCTGTCATGTTTGACAAGCACCCAATGTCAGAATA...AGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGGGCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACCTGTCCAGTGGAGACTaGAGCACATCTGAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDLSSGD*STSEFL Trigger: CAAGAACTCAGATGTGCTCCAGTCTCCACTGGACAG...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTGCAGCAAGCAACTTCTaGGCACCTTGCAGGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLIRGNHASFIALTRELPAASNF*APCREI Trigger: AATCTCCCTGCAAGGTGCTCAGAAGTTGCTTGCTGC...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTAAAAGGCCAGGTTCCTaGATGCAGCCTTACGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLIRGNHASFIALTRELPKRPGS*MQPYAG Trigger: ACCTGCGTAAGGCTGCATCCAGGAACCTGGCCTTTT...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| 3UTR CAA 72 bp | AGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTaGACAGTCAATTTGGTTTTGAAGGGACAGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSHPKKMVPTVQ*TVNLVLKGQQH Trigger: GTGTTGCTGTCCCTTCAAAACCAAATTGACTGTCAACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACGGTGCTTGTCAAACATaGCAGGCAGAAACTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GESCLFHCSNKRTSFMVDGACQT*QAETHQ Trigger: TTGATGAGTTTCTGCCTGTCATGTTTGACAAGCACC...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR TCA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTATTATTCCACACAACTaGGGTCTCTGTGTCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLIRGNHASFIALTRELPIIPHN*GLCVTH Trigger: GTGAGTGACACAGAGACCTCAGTTGTGTGGAATAAT...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 90 bp | GCGTGGCGGGCAGCGCGGGTGCCGCGTTCCGCGCCAGCAGCGCGATaGGCACGCGCGGCGCCTGTAGCGGGGACTCGGGGCTCCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWRAARVPRSAPAAR*ARAAPVAGTRGSSA Trigger: AGCGCTGGAGCCCCGAGTCCCCGCTACAGGCGCCGCGCGTGCTCATCGCGCTGCTGGCGCGGAACGCGGCACCCGCGCTGCCCGCCACGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 90 bp | TCTGTGGCCACCCACAGCGCCGTGCGCTCCCGTGGGTGGCGCAGCTaGTCCAGGGCGCCCAGCGTGGCGGGCAGCGCGGGTGCCGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVATHSAVRSRGWRS*SRAPSVAGSAGAAF Trigger: GAACGCGGCACCCGCGCTGCCCGCCACGCTGGGCGCCCTGGAGCAGCTGCGCCACCCACGGGAGCGCACGGCGCTGTGGGTGGCCACAGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 90 bp | ACCATGACCTCCAGCTGCACGTGCATGAAGCTCTCTGCTTCGTCCTaGAGGCTGCTGTGCGCACGCAGTGGCACGGGCAGGAAGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TMTSSCTCMKLSASS*RLLCARSGTGRKPY Trigger: GTACGGCTTCCTGCCCGTGCCACTGCGTGCGCACAGCAGCCTGCAGGACGAAGCAGAGAGCTTCATGCACGTGCAGCTGGAGGTCATGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 90 bp | GCCACTCTCGAAGTATGGCTGAAGTGTTGTCAGTGTTGTGATCTGTaGCCACCCACAGCGCCGTGCGCTCCCGTGGGTGGCGCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATLEVWLKCCQCCDL*PPTAPCAPVGGAAA Trigger: AGCAGCTGCGCCACCCACGGGAGCGCACGGCGCTGTGGGTGGCCACAGATCACAACACTGACAACACTTCAGCCATACTTCGAGAGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 90 bp | AGCTGCACGTGCATGAAGCTCTCTGCTTCGTCCTGCAGGCTGCTGTaGGCACGCAGTGGCACGGGCAGGAAGCCGTACACCTCCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: SCTCMKLSASSCRLL*ARSGTGRKPYTSLL Trigger: CAATAAGGAGGTGTACGGCTTCCTGCCCGTGCCACTGCGTGCGCACAGCAGCCTGCAGGACGAAGCAGAGAGCTTCATGCACGTGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS GCA 90 bp | TGGATGTTTCACCATGACCTCCAGCTGCACGTGCATGAAGCTCTCTaGTTCGTCCTGCAGGCTGCTGTGCGCACGCAGTGGCACGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WMFHHDLQLHVHEAL*FVLQAAVRTQWHGQ Trigger: CTGCCCGTGCCACTGCGTGCGCACAGCAGCCTGCAGGACGAAGCAGAGAGCTTCATGCACGTGCAGCTGGAGGTCATGGTGAAACATCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS GCA 90 bp | GGAGACTGGAGCACATCTGAGTTCTTGGCCTCACGGCTCAGTGCTTaGTGTTCCCGCATCTTCTGGGACTTGGCTCGGTCCCAGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GDWSTSEFLASRLSA*CSRIFWDLARSQSV Trigger: GACTGACTGGGACCGAGCCAAGTCCCAGAAGATGCGGGAACAGCAAGCACTGAGCCGTGAGGCCAAGAACTCAGATGTGCTCCAGTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS CCA 90 bp | CATGAAGCTCTCTGCTTCGTCCTGCAGGCTGCTGTGCGCACGCAGTaGCACGGGCAGGAAGCCGTACACCTCCTTATTGCACACGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: HEALCFVLQAAVRTQ*HGQEAVHLLIAHVH Trigger: ATGTACGTGTGCAATAAGGAGGTGTACGGCTTCCTGCCCGTGCCACTGCGTGCGCACAGCAGCCTGCAGGACGAAGCAGAGAGCTTCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS GCA 90 bp | AGGTTCCTGGATGCAGCCTTACGCAGGTCAATGAGGAAGGTAGAGTaGACCATGGGAACTGCAAAGCAGCCCCTGCGGTCTCGTTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RFLDAALRRSMRKVE*TMGTAKQPLRSRFR Trigger: CCGAAAACGAGACCGCAGGGGCTGCTTTGCAGTTCCCATGGTGCACTCTACCTTCCTCATTGACCTGCGTAAGGCTGCATCCAGGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR CAA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTGGGGCCACCACTGTCTaGTTCTCAGCGATGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSGATTV*FSAMSR Trigger: CCTGCTCATCGCTGAGAACAAGACAGTGGTGGCCCC...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS TCA 90 bp | AGGAGGGGCTCCACAGAGAAGGCACGCAGGTTGCGGGGAGAGAAGTaGCTCTTGTATTCTGACATTGGGTGCTTGTCAAACATGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRGSTEKARRLRGEK*LLYSDIGCLSNMTG Trigger: GCCTGTCATGTTTGACAAGCACCCAATGTCAGAATACAAGAGTCACTTCTCTCCCCGCAACCTGCGTGCCTTCTCTGTGGAGCCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS CCA 90 bp | GAGTTCTTGGCCTCACGGCTCAGTGCTTGCTGTTCCCGCATCTTCTaGGACTTGGCTCGGTCCCAGTCAGTCTTAACCTGCTCATTATTC | + |
|
Preference number: 5 (lower is better) Translates to: EFLASRLSACCSRIF*DLARSQSVLTCSLF Trigger: GAATAATGAGCAGGTTAAGACTGACTGGGACCGAGCCAAGTCCCAGAAGATGCGGGAACAGCAAGCACTGAGCCGTGAGGCCAAGAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS-3UTR CAA 90 bp | CCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTTTGGCTCGCATCTTCTGGGACTaGGCTCGGTCCCAGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PIVPGKHMKFRCVAVALARIFWD*ARSQSV Trigger: GACTGACTGGGACCGAGCCAAGTCCCAGAAGATGCG...AGCCAAAGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
||
| CDS GCA 90 bp | ATCTTGTCAGAAGTCTTCCTGGGTGCTGAGATGAATCGGGAGAGCTaGACTGGTGGATGTTTCACCATGACCTCCAGCTGCACGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ILSEVFLGAEMNRES*TGGCFTMTSSCTCM Trigger: CATGCACGTGCAGCTGGAGGTCATGGTGAAACATCCACCAGTGCAGCTCTCCCGATTCATCTCAGCACCCAGGAAGACTTCTGACAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 90 bp | CAGAGTGGTATAAACCCTTCACTGCCACCAGCCACTCTCGAAGTATaGCTGAAGTGTTGTCAGTGTTGTGATCTGTGGCCACCCACAGCG | + |
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Preference number: 5 (lower is better) Translates to: QSGINPSLPPATLEV*LKCCQCCDLWPPTA Trigger: CGCTGTGGGTGGCCACAGATCACAACACTGACAACACTTCAGCCATACTTCGAGAGTGGCTGGTGGCAGTGAAGGGTTTATACCACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTTGTAGTCTGGGTGTGTaGGGTAAAAGGCCAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSCSLGV*GKRPGS Trigger: GGAACCTGGCCTTTTACCCAACACACCCAGACTACA...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTCAGCCCAGCTCTCCCTaGGTGAGTGGCCGCCCATGG | + |
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Preference number: 5 (lower is better) Translates to: SLIRGNHASFIALTRELPQPSSP*VSGRPW Trigger: CCATGGGCGGCCACTCACCAAGGGAGAGCTGGGCTG...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 90 bp | GAAGACCTCATCGAAGCCCATCTTGTCAGAAGTCTTCCTGGGTGCTaGGATGAATCGGGAGAGCTGCACTGGTGGATGTTTCACCATGAC | + |
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Preference number: 5 (lower is better) Translates to: EDLIEAHLVRSLPGC*DESGELHWWMFHHD Trigger: GTCATGGTGAAACATCCACCAGTGCAGCTCTCCCGATTCATCTCAGCACCCAGGAAGACTTCTGACAAGATGGGCTTCGATGAGGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | CAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACCCACTGTCCAGTTCATCGAAGCCCATCTaGTCAGAAGTCTTCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: QDLSRQAVIPRRWYPLSSSSKPI*SEVFLG Trigger: ACCCAGGAAGACTTCTGACAAGATGGGCTTCGATGA...ACTGGACAGTGGGTACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | AGTGGCCCTATAGTCCCAGGCAAGCACATGAAGTTTAGGTGTGTAGCAGTGGCTTCAACAGGTAGCATTTaGGCCAGTGGCTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGPIVPGKHMKFRCVAVASTGSI*ASGLAA Trigger: TGCTGCCAAGCCACTGGCCAAAATGCTACCTGTTGA...AGCCACTGCTACACACCTAAACTTCATGTGCTTGCCTGGGACTATAGGGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | GTCATGAGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCAGCACATCTGAGTTCTaGGCCTCACGGCTCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: VMSILEPSSQPREGEQCSSTSEF*ASRLSA Trigger: AGCACTGAGCCGTGAGGCCAAGAACTCAGATGTGCT...GGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACTCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 90 bp | GGCTCGGTCCCAGTCAGTCTTAACCTGCTCATTATTCCACACAACTaGGGTCTCTGTGTCACTCACATAGCCATCATCCCCTGTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSVPVSLNLLIIPHN*GLCVTHIAIIPCVV Trigger: CACTACACAGGGGATGATGGCTATGTGAGTGACACAGAGACCTCAGTTGTGTGGAATAATGAGCAGGTTAAGACTGACTGGGACCGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | ATGAGCAAGTTACCAAGACCTGAGCAGGCAAGCAGTCATCCCAAGAAGATGGTACGCCTCCGCTTCAGGTaGATCATGAAGACCTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: MSKLPRPEQASSHPKKMVRLRFR*IMKTSS Trigger: CGATGAGGTCTTCATGATCAACCTGAAGCGGAGGCG...TACCATCTTCTTGGGATGACTGCTTGCCTGCTCAGGTCTTGGTAACTTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | GGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTTCATGGTGGACCTCACGGCTCAGTGCTaGCTGTTCCCGCATCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GESCLFHCSNKRTSFMVDLTAQC*LFPHLL Trigger: CAGAAGATGCGGGAACAGCAAGCACTGAGCCGTGAG...GTCCACCATGAAGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | AGCCAAGGGACACCTGAGATACAAGGGCAGAGAGAAGCTCTGGAAGTAAGGGGTATTGCACACGTACATTaGCACCTCTGCCTGTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SQGTPEIQGQREALEVRGIAHVH*HLCLFT Trigger: TGTAAACAGGCAGAGGTGCAAATGTACGTGTGCAAT...ACCCCTTACTTCCAGAGCTTCTCTCTGCCCTTGTATCTCAGGTGTCCCTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | TCACTGATAAGGGGGAATCATGCCTCTTTCATTGCTCTAACAAGAGAACTTCCTATCCCACACCAGAAGTaGGAGTATGCCGCTCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLIRGNHASFIALTRELPIPHQK*EYAARE Trigger: CTCCCGAGCGGCATACTCCAACTTCTGGTGTGGGAT...AGGAAGTTCTCTTGTTAGAGCAATGAAAGAGGCATGATTCCCCCTTATCAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS-3UTR CAA 90 bp | GTCATGAGTATCCTTGAACCTAGCAGTCAACCAAGGGAAGGAGAGCAATGCTCCTCTGACATTGGGTGCTaGTCAAACATGACAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VMSILEPSSQPREGEQCSSDIGC*SNMTGR Trigger: TCTGCCTGTCATGTTTGACAAGCACCCAATGTCAGA...GGAGCATTGCTCTCCTTCCCTTGGTTGACTGCTAGGTTCAAGGATACTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 72 bp | GCAGCGCGGGTGCCGCGTTCCGCGCCAGCAGCGCGATaGGCACGCGCGGCGCCTGTAGCGGGGACTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AARVPRSAPAAR*ARAAPVAGTRG Trigger: GCCCCGAGTCCCCGCTACAGGCGCCGCGCGTGCTCATCGCGCTGCTGGCGCGGAACGCGGCACCCGCGCTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | ACCCACAGCGCCGTGCGCTCCCGTGGGTGGCGCAGCTaGTCCAGGGCGCCCAGCGTGGCGGGCAGCGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: THSAVRSRGWRS*SRAPSVAGSAG Trigger: ACCCGCGCTGCCCGCCACGCTGGGCGCCCTGGAGCAGCTGCGCCACCCACGGGAGCGCACGGCGCTGTGGGT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | TGTCAGTGTTGTGATCTGTGGCCACCCACAGCGCCGTaGGCTCCCGTGGGTGGCGCAGCTGCTCCAGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: CQCCDLWPPTAP*APVGGAAAPGR Trigger: GCGCCCTGGAGCAGCTGCGCCACCCACGGGAGCGCACGGCGCTGTGGGTGGCCACAGATCACAACACTGACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | TCCAGCTGCACGTGCATGAAGCTCTCTGCTTCGTCCTaGAGGCTGCTGTGCGCACGCAGTGGCACGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCTCMKLSASS*RLLCARSGTGR Trigger: CCTGCCCGTGCCACTGCGTGCGCACAGCAGCCTGCAGGACGAAGCAGAGAGCTTCATGCACGTGCAGCTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | TGCATGAAGCTCTCTGCTTCGTCCTGCAGGCTGCTGTaGGCACGCAGTGGCACGGGCAGGAAGCCGTACACC | + |
|
Preference number: 6 (lower is better) Translates to: CMKLSASSCRLL*ARSGTGRKPYT Trigger: GGTGTACGGCTTCCTGCCCGTGCCACTGCGTGCGCACAGCAGCCTGCAGGACGAAGCAGAGAGCTTCATGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | CACCATGACCTCCAGCTGCACGTGCATGAAGCTCTCTaGTTCGTCCTGCAGGCTGCTGTGCGCACGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HHDLQLHVHEAL*FVLQAAVRTQW Trigger: CCACTGCGTGCGCACAGCAGCCTGCAGGACGAAGCAGAGAGCTTCATGCACGTGCAGCTGGAGGTCATGGTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | GCGGGAATCGGACCAGTGTTTGGGGCCTTCTTCGTCTaGGTAAGAGCTGGGTTCCTCTGCCGGTCGCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: AGIGPVFGAFFV*VRAGFLCRSPL Trigger: GAGTGGCGACCGGCAGAGGAACCCAGCTCTTACCCAGACGAAGAAGGCCCCAAACACTGGTCCGATTCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | GAAGTATGGCTGAAGTGTTGTCAGTGTTGTGATCTGTaGCCACCCACAGCGCCGTGCGCTCCCGTGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EVWLKCCQCCDL*PPTAPCAPVGG Trigger: GCCACCCACGGGAGCGCACGGCGCTGTGGGTGGCCACAGATCACAACACTGACAACACTTCAGCCATACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | GAGCTGGGTTCCTCTGCCGGTCGCCACTCCACAGAGTaGTATAAACCCTTCACTGCCACCAGCCACTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ELGSSAGRHSTE*YKPFTATSHSR Trigger: TCGAGAGTGGCTGGTGGCAGTGAAGGGTTTATACCACTCTGTGGAGTGGCGACCGGCAGAGGAACCCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | ACCAGTGTTTGGGGCCTTCTTCGTCTGGGTAAGAGCTaGGTTCCTCTGCCGGTCGCCACTCCACAGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSVWGLLRLGKS*VPLPVATPQSG Trigger: ACCACTCTGTGGAGTGGCGACCGGCAGAGGAACCCAGCTCTTACCCAGACGAAGAAGGCCCCAAACACTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 72 bp | CACTCTCGAAGTATGGCTGAAGTGTTGTCAGTGTTGTaGTCTGTGGCCACCCACAGCGCCGTGCGCTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: HSRSMAEVLSVL*SVATHSAVRSR Trigger: ACGGGAGCGCACGGCGCTGTGGGTGGCCACAGATCACAACACTGACAACACTTCAGCCATACTTCGAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | AGCACATCTGAGTTCTTGGCCTCACGGCTCAGTGCTTaGTGTTCCCGCATCTTCTGGGACTTGGCTCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: STSEFLASRLSA*CSRIFWDLARS Trigger: GGACCGAGCCAAGTCCCAGAAGATGCGGGAACAGCAAGCACTGAGCCGTGAGGCCAAGAACTCAGATGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | CAGGCAGCATCTGGATGCCCATGGCTTCCACCTGGCTaGTGTTCATGGCTTTGCCATCTACAGCCTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QAASGCPWLPPG*CSWLCHLQPPP Trigger: TGGTGGAGGCTGTAGATGGCAAAGCCATGAACACCAGCCAGGTGGAAGCCATGGGCATCCAGATGCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | CAGGTCAATGAGGAAGGTAGAGTGCACCATGGGAACTaGAAAGCAGCCCCTGCGGTCTCGTTTTCGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: QVNEEGRVHHGN*KAAPAVSFSDG Trigger: CCCATCCGAAAACGAGACCGCAGGGGCTGCTTTGCAGTTCCCATGGTGCACTCTACCTTCCTCATTGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | GATGCAGCCTTACGCAGGTCAATGAGGAAGGTAGAGTaGACCATGGGAACTGCAAAGCAGCCCCTGCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DAALRRSMRKVE*TMGTAKQPLRS Trigger: AGACCGCAGGGGCTGCTTTGCAGTTCCCATGGTGCACTCTACCTTCCTCATTGACCTGCGTAAGGCTGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | TGCCCATGGCTTCCACCTGGCTGGTGTTCATGGCTTTaGCATCTACAGCCTCCACCAGCTGGCAGTCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: CPWLPPGWCSWL*HLQPPPAGSQS Trigger: AGATTGACTGCCAGCTGGTGGAGGCTGTAGATGGCAAAGCCATGAACACCAGCCAGGTGGAAGCCATGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | TGCTGTCCAGTGGAGACTGGAGCACATCTGAGTTCTTaGCCTCACGGCTCAGTGCTTGCTGTTCCCGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: CCPVETGAHLSS*PHGSVLAVPAS Trigger: AGATGCGGGAACAGCAAGCACTGAGCCGTGAGGCCAAGAACTCAGATGTGCTCCAGTCTCCACTGGACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | CAAAGCTCATCACGGGCAGTGCTGTCCAGTGGAGACTaGAGCACATCTGAGTTCTTGGCCTCACGGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QSSSRAVLSSGD*STSEFLASRLS Trigger: ACTGAGCCGTGAGGCCAAGAACTCAGATGTGCTCCAGTCTCCACTGGACAGCACTGCCCGTGATGAGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CAA 72 bp | AGCATGCGTTCTCGCCGGTCCCGCCTCCGCTTCAGGTaGATCATGAAGACCTCATCGAAGCCCATCTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SMRSRRSRLRFR*IMKTSSKPILS Trigger: TGACAAGATGGGCTTCGATGAGGTCTTCATGATCAACCTGAAGCGGAGGCGGGACCGGCGAGAACGCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | GCAGTGGCACGGGCAGGAAGCCGTACACCTCCTTATTaGACACGTACATTTGCACCTCTGCCTGTTTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVARAGSRTPPY*TRTFAPLPVYR Trigger: CCTGTAAACAGGCAGAGGTGCAAATGTACGTGTGCAATAAGGAGGTGTACGGCTTCCTGCCCGTGCCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | GAAGTCTTCCTGGGTGCTGAGATGAATCGGGAGAGCTaGACTGGTGGATGTTTCACCATGACCTCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EVFLGAEMNRES*TGGCFTMTSSC Trigger: GCAGCTGGAGGTCATGGTGAAACATCCACCAGTGCAGCTCTCCCGATTCATCTCAGCACCCAGGAAGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CAA 72 bp | CGCAGTGGCACGGGCAGGAAGCCGTACACCTCCTTATaGCACACGTACATTTGCACCTCTGCCTGTTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: RSGTGRKPYTSL*HTYICTSACLQ Trigger: CTGTAAACAGGCAGAGGTGCAAATGTACGTGTGCAATAAGGAGGTGTACGGCTTCCTGCCCGTGCCACTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CAA 90 bp | TTGGCCTCACGGCTCAGTGCTTGCTGTTCCCGCATCTTCTGGGACTaGGCTCGGTCCCAGTCAGTCTTAACCTGCTCATTATTCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: LASRLSACCSRIFWD*ARSQSVLTCSLFHT Trigger: TGTGTGGAATAATGAGCAGGTTAAGACTGACTGGGACCGAGCCAAGTCCCAGAAGATGCGGGAACAGCAAGCACTGAGCCGTGAGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 72 bp | ACCCTTCACTGCCACCAGCCACTCTCGAAGTATGGCTaGAGTGTTGTCAGTGTTGTGATCTGTGGCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLHCHQPLSKYG*SVVSVVICGHP Trigger: TGGGTGGCCACAGATCACAACACTGACAACACTTCAGCCATACTTCGAGAGTGGCTGGTGGCAGTGAAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | GTCTGGGTGTGTTGGGTAAAAGGCCAGGTTCCTGGATaGAGCCTTACGCAGGTCAATGAGGAAGGTAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VWVCWVKGQVPG*SLTQVNEEGRV Trigger: CACTCTACCTTCCTCATTGACCTGCGTAAGGCTGCATCCAGGAACCTGGCCTTTTACCCAACACACCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 72 bp | AGCCCATCTTGTCAGAAGTCTTCCTGGGTGCTGAGATaGATCGGGAGAGCTGCACTGGTGGATGTTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSCQKSSWVLR*IGRAALVDVSP Trigger: TGGTGAAACATCCACCAGTGCAGCTCTCCCGATTCATCTCAGCACCCAGGAAGACTTCTGACAAGATGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | GAAACTCATCAACAGGTAGCATTTTGGCCAGTGGCTTaGCAGCAAGCAACTTCTGAGCACCTTGCAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETHQQVAFWPVA*QQATSEHLAGR Trigger: TCTCCCTGCAAGGTGCTCAGAAGTTGCTTGCTGCCAAGCCACTGGCCAAAATGCTACCTGTTGATGAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | AGGAAGCCGTACACCTCCTTATTGCACACGTACATTTaGACCTCTGCCTGTTTACAGGAGAAGGCAAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: RKPYTSLLHTYI*TSACLQEKAKT Trigger: CGTCTTTGCCTTCTCCTGTAAACAGGCAGAGGTGCAAATGTACGTGTGCAATAAGGAGGTGTACGGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS GCA 72 bp | TTCTGGGACTTGGCTCGGTCCCAGTCAGTCTTAACCTaGTCATTATTCCACACAACTGAGGTCTCTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FWDLARSQSVLT*SLFHTTEVSVS Trigger: TGACACAGAGACCTCAGTTGTGTGGAATAATGAGCAGGTTAAGACTGACTGGGACCGAGCCAAGTCCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CCA 72 bp | ATAAACCCTTCACTGCCACCAGCCACTCTCGAAGTATaGCTGAAGTGTTGTCAGTGTTGTGATCTGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: INPSLPPATLEV*LKCCQCCDLWP Trigger: TGGCCACAGATCACAACACTGACAACACTTCAGCCATACTTCGAGAGTGGCTGGTGGCAGTGAAGGGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS CAA 72 bp | TTGTTCTCAGCGATGAGCAGGCTCAGAGTGTCGGGGTaGGTGATCAAGTTGTCGATGTCCATGAACAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LFSAMSRLRVSG*VIKLSMSMNRM Trigger: CATTCTGTTCATGGACATCGACAACTTGATCACCAACCCCGACACTCTGAGCCTGCTCATCGCTGAGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 72 bp | ACGCAGGTTGCGGGGAGAGAAGTGACTCTTGTATTCTaGCATTGGGTGCTTGTCAAACATGACAGGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TQVAGREVTLVF*HWVLVKHDRQK Trigger: TTTCTGCCTGTCATGTTTGACAAGCACCCAATGTCAGAATACAAGAGTCACTTCTCTCCCCGCAACCTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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| CDS TCA 72 bp | CCAGTCAGTCTTAACCTGCTCATTATTCCACACAACTaGGGTCTCTGTGTCACTCACATAGCCATCATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PVSLNLLIIPHN*GLCVTHIAIIP Trigger: GGGGATGATGGCTATGTGAGTGACACAGAGACCTCAGTTGTGTGGAATAATGAGCAGGTTAAGACTGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047903.10 |
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