Pregenerated sensors for COLEC11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036655Ensembl transcript IDs: ENSMUST00000036136.9, ENSMUST00000220655.2, ENSMUST00000220836.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCGGGCCAGGCCAGCCTGTGCCAGGTATGAAGCCATCAGGCCATTaGCTGCCTCGTCTTTGGGCATGCTCAGTGTGCCGCCTCGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: LGPGQPVPGMKPSGH*LPRLWACSVCRLGL Trigger: AAGCCCGAGGCGGCACACTGAGCATGCCCAAAGACGAGGCAGCCAATGGCCTGATGGCTTCATACCTGGCACAGGCTGGCCTGGCCCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR CCA 90 bp | TTGGCTGCCTCGTCTTTGGGCATGCTCAGTGTGCCGCCTCGGGCTTaGCAGGACAGCTGGGCATCTGCGTACCGCTTCTCCTCCTTCACC | + |
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Preference number: 1 (lower is better) Translates to: LAASSLGMLSVPPRA*QDSWASAYRFSSFT Trigger: GGTGAAGGAGGAGAAGCGGTACGCAGATGCCCAGCTGTCCTGCCAAGCCCGAGGCGGCACACTGAGCATGCCCAAAGACGAGGCAGCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR TCA 90 bp | AGGTTTCTCCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATaGGGCCCGGCACTTCCATGCAGAGAGGAACCCGCAGACATGGCG | + |
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Preference number: 1 (lower is better) Translates to: RFLPSYGSNSPSNCQ*GPALPCREEPADMA Trigger: CGCCATGTCTGCGGGTTCCTCTCTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGGAGAAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR TCA 90 bp | CCTCCTCATCATAGGCGTTGTTGGGCTCTCCACTGCGCCACTTGTTaGAGGTCTGCATGGGGGAGCGGTCCGAGTACACGAAAGCACCTT | + |
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Preference number: 1 (lower is better) Translates to: PPHHRRCWALHCATC*RSAWGSGPSTRKHL Trigger: AAGGTGCTTTCGTGTACTCGGACCGCTCCCCCATGCAGACCTTCAACAAGTGGCGCAGTGGAGAGCCCAACAACGCCTATGATGAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR CCA 90 bp | GTCAATGAGGCCCGGCACTTCCATGCAGAGAGGAACCCGCAGACATaGCGACTGGTGCTCAGGGTTAGTTTGTGGCCGCTGGTGTCTATA | + |
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Preference number: 1 (lower is better) Translates to: VNEARHFHAERNPQT*RLVLRVSLWPLVSI Trigger: TATAGACACCAGCGGCCACAAACTAACCCTGAGCACCAGTCGCCATGTCTGCGGGTTCCTCTCTGCATGGAAGTGCCGGGCCTCATTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR CAA 90 bp | ACTCGGGCCAGGCCAGCCTGTGCCAGGTATGAAGCCATCAGGCCATaGGCTGCCTCGTCTTTGGGCATGCTCAGTGTGCCGCCTCGGGCT | + |
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Preference number: 2 (lower is better) Translates to: TRARPACARYEAIRP*AASSLGMLSVPPRA Trigger: AGCCCGAGGCGGCACACTGAGCATGCCCAAAGACGAGGCAGCCAATGGCCTGATGGCTTCATACCTGGCACAGGCTGGCCTGGCCCGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | CGCCACTTGTTGAAGGTCTGCATGGGGGAGCGGTCCGAGTACACGAAAGCACCTTGGGCATGCTCAGTGTaGCGCCTCGGGCTTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RHLLKVCMGERSEYTKAPWACSV*RLGLGR Trigger: CCTGCCAAGCCCGAGGCGGCACACTGAGCATGCCCA...AGGTGCTTTCGTGTACTCGGACCGCTCCCCCATGCAGACCTTCAACAAGTGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR CAA 90 bp | GGGGAGCGGTCCGAGTACACGAAAGCACCTTCTTTCTCCAGGTCATaGATACCGATGAAGACTCGGGCCAGGCCAGCCTGTGCCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: GERSEYTKAPSFSRS*IPMKTRARPACARY Trigger: ATACCTGGCACAGGCTGGCCTGGCCCGAGTCTTCATCGGTATCAATGACCTGGAGAAAGAAGGTGCTTTCGTGTACTCGGACCGCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCTCAGGGTTAGTTTGTGGCCGCTGGTGTCTATAAAAGGTGGCGTTCAGCACTGCGCCACTTGTTaGAGGTCTGCATGGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LVLRVSLWPLVSIKGGVQHCATC*RSAWGS Trigger: GCTCCCCCATGCAGACCTTCAACAAGTGGCGCAGTG...CTGAACGCCACCTTTTATAGACACCAGCGGCCACAAACTAACCCTGAGCACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | CATTGGTCACCACCTGGGCACTCTGTGTACTTTATAGGGTGGGCGGCAACTCCTAGGAACCCGCAGACATaGCGACTGGTGCTCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: HWSPPGHSVYFIGWAATPRNPQT*RLVLRV Trigger: AACCCTGAGCACCAGTCGCCATGTCTGCGGGTTCCT...AGGAGTTGCCGCCCACCCTATAAAGTACACAGAGTGCCCAGGTGGTGACCAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGGCCATCTCCCCTGTCGGCTCTCACAAGTTCTCTTTGTCAAACTCGCACACCAGCAGGTAGATCTTaGTCTCAGTCTCGCGCACGC | + |
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Preference number: 2 (lower is better) Translates to: RWPSPLSALTSSLCQTRTPAGRS*SQSRAR Trigger: GCGTGCGCGAGACTGAGAGCAAGATCTACCTGCTGG...TGTGCGAGTTTGACAAAGAGAACTTGTGAGAGCCGACAGGGGAGATGGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGGCCATCTCCCCTGTCGGCTCTCACAAGTTCTCTTTGTCAAACTCGCACAGGACAGCTGGGCATCTaGGTACCGCTTCTCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RWPSPLSALTSSLCQTRTGQLGI*VPLLLL Trigger: AAGGAGGAGAAGCGGTACGCAGATGCCCAGCTGTCC...TGTGCGAGTTTGACAAAGAGAACTTGTGAGAGCCGACAGGGGAGATGGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCATCTCCCCTGTCGGCTCTCACAAGTTCTCTTTGTCAAACTCGCACATAGGAACCCGCAGACATaGCGACTGGTGCTCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: DGHLPCRLSQVLFVKLAHRNPQT*RLVLRV Trigger: AACCCTGAGCACCAGTCGCCATGTCTGCGGGTTCCT...ATGTGCGAGTTTGACAAAGAGAACTTGTGAGAGCCGACAGGGGAGATGGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGGCCATCTCCCCTGTCGGCTCTCACAAGTTCTCTTTGTCAAACTCGCACAAAGCCATCAGGCCATTaGCTGCCTCGTCTTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RWPSPLSALTSSLCQTRTKPSGH*LPRLWA Trigger: TGCCCAAAGACGAGGCAGCCAATGGCCTGATGGCTT...TGTGCGAGTTTGACAAAGAGAACTTGTGAGAGCCGACAGGGGAGATGGCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR CAA 90 bp | GGCGTTCAGATGGCCATCTCCCCTGTCGGCTCTCACAAGTTCTCTTaGTCAAACTCGCACATGAAGTACATGGTAATGTGGCAGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: GVQMAISPVGSHKFS*SNSHMKYMVMWQAT Trigger: TGTGGCCTGCCACATTACCATGTACTTCATGTGCGAGTTTGACAAAGAGAACTTGTGAGAGCCGACAGGGGAGATGGCCATCTGAACGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATGGGGGAGCGGTCCGAGTACACGAAAGCACCTTCTTTCTCCAGGTCATTGCACCTTTTGCGCCAATaGGACCAATTTTTCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: CMGERSEYTKAPSFSRSLHLLRQ*DQFFHG Trigger: GCCATGGAAAAATTGGTCCCATTGGCGCAAAAGGTG...CAATGACCTGGAGAAAGAAGGTGCTTTCGTGTACTCGGACCGCTCCCCCATGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGCTCAGGGTTAGTTTGTGGCCGCTGGTGTCTATAAAAGGTGGCGTTCAGCTGACTGCACTCACATaGAATACCAGGTTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: LVLRVSLWPLVSIKGGVQLTALT*NTRFST Trigger: AGTGGAGAACCTGGTATTCCATGTGAGTGCAGTCAG...CTGAACGCCACCTTTTATAGACACCAGCGGCCACAAACTAACCCTGAGCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGAAGCAGAGCAGCAGTCTTCCTACCCGGATAATAGTGAAAGGAATCTATGTCATGGCGGCCCACAGTaGCTTTCTGTCCTTTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: CEAEQQSSYPDNSERNLCHGGPQ*LSVLCP Trigger: GGGACAAAGGACAGAAAGGCACTGTGGGCCGCCATG...ACATAGATTCCTTTCACTATTATCCGGGTAGGAAGACTGCTGCTCTGCTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCACCTGGGCACTCTGTGTACTTTATAGGGTGGGCGGCAACTCCTGCCCCTCAAAATTTACTATGCTaGACCAAGACAAGAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SPPGHSVYFIGWAATPAPQNLLC*TKTRAS Trigger: TGAAGCTCTTGTCTTGGTCCAGCATAGTAAATTTTG...AGGGGCAGGAGTTGCCGCCCACCCTATAAAGTACACAGAGTGCCCAGGTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | CTATGTGATAGCATAACCTATAGAAACATTGGTCACCACCTGGGCACTCTGTGTTACCAGGTTCTCCACTaGGGCCAGGGGGTCCGATAT | + |
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Preference number: 2 (lower is better) Translates to: LCDSITYRNIGHHLGTLCYQVLH*GQGVRY Trigger: ATATCGGACCCCCTGGCCCCAGTGGAGAACCTGGTA...ACACAGAGTGCCCAGGTGGTGACCAATGTTTCTATAGGTTATGCTATCACATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | CTATGTGATAGCATAACCTATAGAAACATTGGTCACCACCTGGGCACTCTGTGTCATCAGGCCATTGGCTaGCTCGTCTTTGGGCATGCT | + |
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Preference number: 2 (lower is better) Translates to: LCDSITYRNIGHHLGTLCHQAIG*LVFGHA Trigger: AGCATGCCCAAAGACGAGGCAGCCAATGGCCTGATG...ACACAGAGTGCCCAGGTGGTGACCAATGTTTCTATAGGTTATGCTATCACATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGAAGCAGAGCAGCAGTCTTCCTACCCGGATAATAGTGAAAGGAATCTATGTAGACATGGCGACTGGTaGTCAGGGTTAGTTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: CEAEQQSSYPDNSERNLCRHGDW*SGLVCG Trigger: GCCACAAACTAACCCTGAGCACCAGTCGCCATGTCT...ACATAGATTCCTTTCACTATTATCCGGGTAGGAAGACTGCTGCTCTGCTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGTTTGATGACTGCTaGAAAATTTACTATGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LLRFKQPFQLSMRPGTSMQFDDC*KIYYAG Trigger: TCCAGCATAGTAAATTTTGCAGCAGTCATCAAACTG...CATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTTATTTGTTTTCCTGAAATATGGATGTGAAGCAGAGCAGCAGTCTTCCAGACATGGCGACTGGTaGTCAGGGTTAGTTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: EDLFVFLKYGCEAEQQSSRHGDW*SGLVCG Trigger: GCCACAAACTAACCCTGAGCACCAGTCGCCATGTCT...GGAAGACTGCTGCTCTGCTTCACATCCATATTTCAGGAAAACAAATAAATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGAGTACACGAAAGCACCTTCTTTCTCCAGGTCATTGATACCGATGAAGACTACATTGGTCACCACCTaGGCACTCTGTGTACTTTAT | + |
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Preference number: 2 (lower is better) Translates to: SEYTKAPSFSRSLIPMKTTLVTT*ALCVLY Trigger: ATAAAGTACACAGAGTGCCCAGGTGGTGACCAATGT...AGTCTTCATCGGTATCAATGACCTGGAGAAAGAAGGTGCTTTCGTGTACTCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGAGTACACGAAAGCACCTTCTTTCTCCAGGTCATTGATACCGATGAAGACTCAAAATTTACTATGCTaGACCAAGACAAGAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SEYTKAPSFSRSLIPMKTQNLLC*TKTRAS Trigger: TGAAGCTCTTGTCTTGGTCCAGCATAGTAAATTTTG...AGTCTTCATCGGTATCAATGACCTGGAGAAAGAAGGTGCTTTCGTGTACTCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTTATTTGTTTTCCTGAAATATGGATGTGAAGCAGAGCAGCAGTCTTCCAGCCAGTTTGATGACTaGTGCAAAATTTACTATGCT | + |
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Preference number: 2 (lower is better) Translates to: EDLFVFLKYGCEAEQQSSSQFDD*CKIYYA Trigger: AGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCT...GGAAGACTGCTGCTCTGCTTCACATCCATATTTCAGGAAAACAAATAAATCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR CCA 72 bp | GCCCGGCACTTCCATGCAGAGAGGAACCCGCAGACATaGCGACTGGTGCTCAGGGTTAGTTTGTGGCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: ARHFHAERNPQT*RLVLRVSLWPL Trigger: CAGCGGCCACAAACTAACCCTGAGCACCAGTCGCCATGTCTGCGGGTTCCTCTCTGCATGGAAGTGCCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR CCA 72 bp | GGTATGAAGCCATCAGGCCATTGGCTGCCTCGTCTTTaGGCATGCTCAGTGTGCCGCCTCGGGCTTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GMKPSGHWLPRL*ACSVCRLGLGR Trigger: CCTGCCAAGCCCGAGGCGGCACACTGAGCATGCCCAAAGACGAGGCAGCCAATGGCCTGATGGCTTCATACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGGAAGCCATCAGGCCATaGGCTGCCTCGTCTTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LLRFKQPFQLSMRPGTSMEAIRP*AASSLG Trigger: GCCCAAAGACGAGGCAGCCAATGGCCTGATGGCTTC...CATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR GCA 72 bp | TTGTTGGGCTCTCCACTGCGCCACTTGTTGAAGGTCTaGATGGGGGAGCGGTCCGAGTACACGAAAGCACCT | + |
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Preference number: 3 (lower is better) Translates to: LLGSPLRHLLKV*MGERSEYTKAP Trigger: AGGTGCTTTCGTGTACTCGGACCGCTCCCCCATGCAGACCTTCAACAAGTGGCGCAGTGGAGAGCCCAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR CCA 72 bp | ACTTCCATGCAGAGAGGAACCCGCAGACATGGCGACTaGTGCTCAGGGTTAGTTTGTGGCCGCTGGTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: TSMQRGTRRHGD*CSGLVCGRWCL Trigger: TAGACACCAGCGGCCACAAACTAACCCTGAGCACCAGTCGCCATGTCTGCGGGTTCCTCTCTGCATGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR GCA 72 bp | CGTACCGCTTCTCCTCCTTCACCAGCAGGTAGATCTTaGTCTCAGTCTCGCGCACGCCAGCAACAGCATTTT | + |
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Preference number: 3 (lower is better) Translates to: RTASPPSPAGRS*SQSRARQQQHF Trigger: AAAATGCTGTTGCTGGCGTGCGCGAGACTGAGAGCAAGATCTACCTGCTGGTGAAGGAGGAGAAGCGGTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR CCA 72 bp | TGGTCACCACCTGGGCACTCTGTGTACTTTATAGGGTaGGCGGCAACTCCTGCCCCTATAGCCAGTTTGATG | + |
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Preference number: 3 (lower is better) Translates to: WSPPGHSVYFIG*AATPAPIASLM Trigger: CATCAAACTGGCTATAGGGGCAGGAGTTGCCGCCCACCCTATAAAGTACACAGAGTGCCCAGGTGGTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR CCA 72 bp | GCTGACTGCACTCACATGGAATACCAGGTTCTCCACTaGGGCCAGGGGGTCCGATATCACCAGAATCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: ADCTHMEYQVLH*GQGVRYHQNLL Trigger: AAGGAGATTCTGGTGATATCGGACCCCCTGGCCCCAGTGGAGAACCTGGTATTCCATGTGAGTGCAGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR CCA 72 bp | TCTTTGTCAAACTCGCACATGAAGTACATGGTAATGTaGCAGGCCACATCATTCCAGCCACCTGAGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: SLSNSHMKYMVM*QATSFQPPEAT Trigger: GGTGGCCTCAGGTGGCTGGAATGATGTGGCCTGCCACATTACCATGTACTTCATGTGCGAGTTTGACAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGTGCTCAGGGTTAGTTTGTGGCCGCTGGTGTCTATAAAAGGTGGCGTTCAGGCCCCTATAGCCAGTTaGATGACTGCTGCAAAATTT | + |
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Preference number: 3 (lower is better) Translates to: LVLRVSLWPLVSIKGGVQAPIAS*MTAAKF Trigger: AAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGC...CTGAACGCCACCTTTTATAGACACCAGCGGCCACAAACTAACCCTGAGCACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTTCTCCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGCCCCTATAGCCAGTTaGATGACTGCTGCAAAATTT | + |
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Preference number: 3 (lower is better) Translates to: KVSPLLRFKQPFQLSMRPAPIAS*MTAAKF Trigger: AAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGC...GGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGGAGAAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCAGTTGAGTGACCTGGTTGTCCATCTCCCCAATAGCCTTCCTCAGCTGACTCTCCTTTTTCACCTTTaGCGCCAATGGGACCAATTT | + |
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Preference number: 3 (lower is better) Translates to: CQLSDLVVHLPNSLPQLTLLFHL*RQWDQF Trigger: AAATTGGTCCCATTGGCGCAAAAGGTGAAAAAGGAG...AGTCAGCTGAGGAAGGCTATTGGGGAGATGGACAACCAGGTCACTCAACTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| CDS-3UTR TCA 90 bp | CAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGAGAGGAACCCGCTCCTCTGTGGTCTGCTaGGGACATCCAGATGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPFQLSMRPGTSMQRGTRSSVVC*GHPDGS Trigger: GCTGCCATCTGGATGTCCTCAGCAGACCACAGAGGA...GCGGGTTCCTCTCTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR GCA 90 bp | GGAACCCGCAGACATGGCGACTGGTGCTCAGGGTTAGTTTGTGGCCGCTGGTGTCATGGCGGCCCACAGTaGCTTTCTGTCCTTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GTRRHGDWCSGLVCGRWCHGGPQ*LSVLCP Trigger: GGGACAAAGGACAGAAAGGCACTGTGGGCCGCCATG...ACACCAGCGGCCACAAACTAACCCTGAGCACCAGTCGCCATGTCTGCGGGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | CAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGAGAGGAACCCGCTCTTCCTGGCCGTCCTaGGGCTCCTTTGTCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QPFQLSMRPGTSMQRGTRSSWPS*GSFVSL Trigger: AAGGGAGACAAAGGAGCCCCAGGACGGCCAGGAAGA...GCGGGTTCCTCTCTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CCA 90 bp | AAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGAGAGGAACCGTGCCGCCTCGGGCTTaGCAGGACAGCTGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: KQPFQLSMRPGTSMQRGTVPPRA*QDSWAS Trigger: AGATGCCCAGCTGTCCTGCCAAGCCCGAGGCGGCAC...GGTTCCTCTCTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCCCAGCAGGTAGATCTTaGTCTCAGTCTCGCGCACGC | + |
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Preference number: 4 (lower is better) Translates to: PLLRFKQPFQLSMRPGTSPAGRS*SQSRAR Trigger: GCGTGCGCGAGACTGAGAGCAAGATCTACCTGCTGG...GGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR TCA 90 bp | AAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGAGAGGAACCCACTGCGCCACTTGTTaGAGGTCTGCATGGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KQPFQLSMRPGTSMQRGTHCATC*RSAWGS Trigger: GCTCCCCCATGCAGACCTTCAACAAGTGGCGCAGTG...GGTTCCTCTCTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | CTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGTGGCTGCCTCGTCTTTaGGCATGCTCAGTGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LLRFKQPFQLSMRPGTSMWLPRL*ACSVCR Trigger: GCGGCACACTGAGCATGCCCAAAGACGAGGCAGCCA...CATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR TCA 90 bp | CTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGCTCCTGCATCCCCTTTaGGGCCAGGGACAAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: LRFKQPFQLSMRPGTSMQLLHPL*GQGQES Trigger: AGATTCTTGTCCCTGGCCTCAAAGGGGATGCAGGAG...CTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTTCTCCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCAGCCTGTGCCAGGTATaGAGCCATCAGGCCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: KVSPLLRFKQPFQLSMRPSLCQV*SHQAIG Trigger: GCCAATGGCCTGATGGCTTCATACCTGGCACAGGCT...GGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGGAGAAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR GCA 90 bp | CTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGCCAGGGACAAGAATCTaGACAGAGCAGGCGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRFKQPFQLSMRPGTSMQPGTRI*TEQASS Trigger: AGAGGACGCCTGCTCTGTGCAGATTCTTGTCCCTGG...CTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CCA 90 bp | GAAACATTGGTCACCACCTGGGCACTCTGTGTACTTTATAGGGTGGGCGGCAACTCTTCCTGGCCGTCCTaGGGCTCCTTTGTCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: ETLVTTWALCVLYRVGGNSSWPS*GSFVSL Trigger: AAGGGAGACAAAGGAGCCCCAGGACGGCCAGGAAGA...GTTGCCGCCCACCCTATAAAGTACACAGAGTGCCCAGGTGGTGACCAATGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CCA 90 bp | GGAACCCGCAGACATGGCGACTGGTGCTCAGGGTTAGTTTGTGGCCGCTGGTGTCACCTTTTGCGCCAATaGGACCAATTTTTCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: GTRRHGDWCSGLVCGRWCHLLRQ*DQFFHG Trigger: GCCATGGAAAAATTGGTCCCATTGGCGCAAAAGGTG...ACACCAGCGGCCACAAACTAACCCTGAGCACCAGTCGCCATGTCTGCGGGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | CTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGAAGCCATCAGGCCATTaGCTGCCTCGTCTTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRFKQPFQLSMRPGTSMQKPSGH*LPRLWA Trigger: TGCCCAAAGACGAGGCAGCCAATGGCCTGATGGCTT...CTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR GCA 90 bp | CATTGGTCACCACCTGGGCACTCTGTGTACTTTATAGGGTGGGCGGCAACTCCTGCTAATCAGCATGCCTaGAAGAGCCAGGTCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: HWSPPGHSVYFIGWAATPANQHA*KSQVPH Trigger: ATGAGGGACCTGGCTCTTGCAGGCATGCTGATTAGC...AGGAGTTGCCGCCCACCCTATAAAGTACACAGAGTGCCCAGGTGGTGACCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CCA 90 bp | AAGGTTTCTCCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCCTGAGGACATCCAGATaGCAGCAGGGACAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KVSPLLRFKQPFQLSMRPLRTSR*QQGQES Trigger: GCTTTCCTGTCCCTGCTGCCATCTGGATGTCCTCAG...GGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGGAGAAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR CAA 72 bp | TCCGAGTACACGAAAGCACCTTCTTTCTCCAGGTCATaGATACCGATGAAGACTCGGGCCAGGCCAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SEYTKAPSFSRS*IPMKTRARPAC Trigger: ACAGGCTGGCCTGGCCCGAGTCTTCATCGGTATCAATGACCTGGAGAAAGAAGGTGCTTTCGTGTACTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| CDS-3UTR CCA 90 bp | AAGGTTTCTCCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGACCAATTTTTCCATaGCGGCCCACAGTGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KVSPLLRFKQPFQLSMRPGPIFP*RPTVPF Trigger: GAAAGGCACTGTGGGCCGCCATGGAAAAATTGGTCC...GGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGGAGAAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR GCA 90 bp | GCGGCAACTCCTGCCCCTATAGCCAGTTTGATGACTGCTGCAAAATTTACTATGGGACAGCTGGGCATCTaGGTACCGCTTCTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AATPAPIASLMTAAKFTMGQLGI*VPLLLL Trigger: AAGGAGGAGAAGCGGTACGCAGATGCCCAGCTGTCC...CATAGTAAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGCAGGAGTTGCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR GCA 90 bp | AAGCAGAGCAGCAGTCTTCCTACCCGGATAATAGTGAAAGGAATCTATGTGATATGGGCATGCTCAGTGTaGCGCCTCGGGCTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KQSSSLPTRIIVKGIYVIWACSV*RLGLGR Trigger: CCTGCCAAGCCCGAGGCGGCACACTGAGCATGCCCA...TATCACATAGATTCCTTTCACTATTATCCGGGTAGGAAGACTGCTGCTCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | GCGGCAACTCCTGCCCCTATAGCCAGTTTGATGACTGCTGCAAAATTTACTATGTACCAGGTTCTCCACTaGGGCCAGGGGGTCCGATAT | + |
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Preference number: 4 (lower is better) Translates to: AATPAPIASLMTAAKFTMYQVLH*GQGVRY Trigger: ATATCGGACCCCCTGGCCCCAGTGGAGAACCTGGTA...CATAGTAAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGCAGGAGTTGCCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | AAGCAGAGCAGCAGTCTTCCTACCCGGATAATAGTGAAAGGAATCTATGTGATAAGGGCCGACTCTTCCTaGCCGTCCTGGGGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KQSSSLPTRIIVKGIYVIRADSS*PSWGSF Trigger: AAAGGAGCCCCAGGACGGCCAGGAAGAGTCGGCCCT...TATCACATAGATTCCTTTCACTATTATCCGGGTAGGAAGACTGCTGCTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CCA 90 bp | GCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGGACCAAGACAAGAGCTTCGCTTGGCAGGACAGCTaGGCATCTGCGTACCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ASLMTAAKFTMLDQDKSFAWQDS*ASAYRF Trigger: GAAGCGGTACGCAGATGCCCAGCTGTCCTGCCAAGC...GAAGCTCTTGTCTTGGTCCAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | GCCAGGTATGAAGCCATCAGGCCATTGGCTGCCTCGTCTTTGGGCATGCTCAGTTTCTCAGAATCCACATaGCAGCTCACACCATCTATA | + |
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Preference number: 4 (lower is better) Translates to: ARYEAIRPLAASSLGMLSFSEST*QLTPSI Trigger: TATAGATGGTGTGAGCTGCCATGTGGATTCTGAGAA...ACTGAGCATGCCCAAAGACGAGGCAGCCAATGGCCTGATGGCTTCATACCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGGACCAAGACAAGAGCTTCATCATTCCAGCCACCTaGGGCCACCATCTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: ASLMTAAKFTMLDQDKSFIIPAT*GHHLHT Trigger: TGTGTGGAGATGGTGGCCTCAGGTGGCTGGAATGAT...GAAGCTCTTGTCTTGGTCCAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR GCA 90 bp | GCAACTCCTGCCCCTATAGCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGGCTAATCAGCATGCCTaGAAGAGCCAGGTCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ATPAPIASLMTAAKFTMLANQHA*KSQVPH Trigger: ATGAGGGACCTGGCTCTTGCAGGCATGCTGATTAGC...CAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGCAGGAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR GCA 90 bp | CTATGTGATAGCATAACCTATAGAAACATTGGTCACCACCTGGGCACTCTGTGTCCAGGGACAAGAATCTaGACAGAGCAGGCGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LCDSITYRNIGHHLGTLCPGTRI*TEQASS Trigger: AGAGGACGCCTGCTCTGTGCAGATTCTTGTCCCTGG...ACACAGAGTGCCCAGGTGGTGACCAATGTTTCTATAGGTTATGCTATCACATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| 3UTR CAA 72 bp | ATGGCCATCTCCCCTGTCGGCTCTCACAAGTTCTCTTaGTCAAACTCGCACATGAAGTACATGGTAATGTGG | + |
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Preference number: 4 (lower is better) Translates to: MAISPVGSHKFS*SNSHMKYMVMW Trigger: CCACATTACCATGTACTTCATGTGCGAGTTTGACAAAGAGAACTTGTGAGAGCCGACAGGGGAGATGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220655.2 |
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| CDS-3UTR TCA 90 bp | AGCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGGACCAAGACAAGAGCTTCTCCTGCATCCCCTTTaGGGCCAGGGACAAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: SQFDDCCKIYYAGPRQELLLHPL*GQGQES Trigger: AGATTCTTGTCCCTGGCCTCAAAGGGGATGCAGGAG...AAGCTCTTGTCTTGGTCCAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGGACCAAGACAAGAGCTTCTGAGGACATCCAGATaGCAGCAGGGACAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SQFDDCCKIYYAGPRQELLRTSR*QQGQES Trigger: GCTTTCCTGTCCCTGCTGCCATCTGGATGTCCTCAG...AAGCTCTTGTCTTGGTCCAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR GCA 90 bp | GAGGATTTATTTGTTTTCCTGAAATATGGATGTGAAGCAGAGCAGCAGTCTTCCCATCAGGCCATTGGCTaGCTCGTCTTTGGGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: EDLFVFLKYGCEAEQQSSHQAIG*LVFGHA Trigger: AGCATGCCCAAAGACGAGGCAGCCAATGGCCTGATG...GGAAGACTGCTGCTCTGCTTCACATCCATATTTCAGGAAAACAAATAAATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | GCAACTCCTGCCCCTATAGCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGCTGACTGCACTCACATaGAATACCAGGTTCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: ATPAPIASLMTAAKFTMLLTALT*NTRFST Trigger: AGTGGAGAACCTGGTATTCCATGTGAGTGCAGTCAG...CAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGCAGGAGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR GCA 90 bp | CCTGCCCCTATAGCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGGACCAATCCTTTTTCACCTTTTaGGCCAATGGGACCAATTTT | + |
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Preference number: 4 (lower is better) Translates to: PAPIASLMTAAKFTMLDQSFFTF*ANGTNF Trigger: AAAATTGGTCCCATTGGCGCAAAAGGTGAAAAAGGA...TTGGTCCAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CCA 90 bp | CCCTATAGCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGGACCAAGACAAAAGTACATGGTAATGTaGCAGGCCACATCATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PYSQFDDCCKIYYAGPRQKYMVM*QATSFQ Trigger: CTGGAATGATGTGGCCTGCCACATTACCATGTACTT...TTGTCTTGGTCCAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCTATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS GCA 90 bp | GGGCATCTGCGTACCGCTTCTCCTCCTTCACCAGCAGGTAGATCTTaGTCTCAGTCTCGCGCACGCCAGCAACAGCTGCAGGGGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GHLRTASPPSPAGRS*SQSRARQQQLQGRA Trigger: TGCCCTCCCCTGCAGCTGTTGCTGGCGTGCGCGAGACTGAGAGCAAGATCTACCTGCTGGTGAAGGAGGAGAAGCGGTACGCAGATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220836.2 |
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| CDS-3UTR CAA 90 bp | TCACCACCTGGGCACTCTGTGTACTTTATAGGGTGGGCGGCAACTCCTGCCCCTCGTCCTGGGGCTCCTTaGTCTCCCTTTTCTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SPPGHSVYFIGWAATPAPRPGAP*SPFSPA Trigger: TGCAGGAGAAAAGGGAGACAAAGGAGCCCCAGGACG...AGGGGCAGGAGTTGCCGCCCACCCTATAAAGTACACAGAGTGCCCAGGTGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTTCTCCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCTTGGCTGCCTCGTCTTaGGGCATGCTCAGTGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: KVSPLLRFKQPFQLSMRPLAASS*GMLSVP Trigger: CGGCACACTGAGCATGCCCAAAGACGAGGCAGCCAA...GGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGGAGAAACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CAA 90 bp | GAAACATTGGTCACCACCTGGGCACTCTGTGTACTTTATAGGGTGGGCGGCAACCGTCCTGGGGCTCCTTaGTCTCCCTTTTCTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ETLVTTWALCVLYRVGGNRPGAP*SPFSPA Trigger: TGCAGGAGAAAAGGGAGACAAAGGAGCCCCAGGACG...GTTGCCGCCCACCCTATAAAGTACACAGAGTGCCCAGGTGGTGACCAATGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTTCTCCCCTCCTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCTCTCCTGCATCCCCTTaGAGGCCAGGGACAAGAATC | + |
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Preference number: 5 (lower is better) Translates to: KVSPLLRFKQPFQLSMRPSPASP*RPGTRI Trigger: GATTCTTGTCCCTGGCCTCAAAGGGGATGCAGGAGA...GGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAGGAGGGGAGAAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CAA 90 bp | CTACGGTTCAAACAGCCCTTCCAACTGTCAATGAGGCCCGGCACTTCCATGCAGCTCCTTTTTCACCTTTaGCGCCAATGGGACCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LRFKQPFQLSMRPGTSMQLLFHL*RQWDQF Trigger: AAATTGGTCCCATTGGCGCAAAAGGTGAAAAAGGAG...CTGCATGGAAGTGCCGGGCCTCATTGACAGTTGGAAGGGCTGTTTGAACCGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CAA 90 bp | CTATGTGATAGCATAACCTATAGAAACATTGGTCACCACCTGGGCACTCTGTGTCCACTGCGCCACTTGTaGAAGGTCTGCATGGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LCDSITYRNIGHHLGTLCPLRHL*KVCMGE Trigger: CTCCCCCATGCAGACCTTCAACAAGTGGCGCAGTGG...ACACAGAGTGCCCAGGTGGTGACCAATGTTTCTATAGGTTATGCTATCACATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS-3UTR CAA 90 bp | GTGAAGCAGAGCAGCAGTCTTCCTACCCGGATAATAGTGAAAGGAATCTATGTGTCTCCTGCATCCCCTTaGAGGCCAGGGACAAGAATC | + |
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Preference number: 5 (lower is better) Translates to: VKQSSSLPTRIIVKGIYVSPASP*RPGTRI Trigger: GATTCTTGTCCCTGGCCTCAAAGGGGATGCAGGAGA...CACATAGATTCCTTTCACTATTATCCGGGTAGGAAGACTGCTGCTCTGCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 |
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| CDS-3UTR CAA 90 bp | GCAACTCCTGCCCCTATAGCCAGTTTGATGACTGCTGCAAAATTTACTATGCTGTCTTTCTCCAGGTCATaGATACCGATGAAGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ATPAPIASLMTAAKFTMLSFSRS*IPMKTR Trigger: CCGAGTCTTCATCGGTATCAATGACCTGGAGAAAGA...CAGCATAGTAAATTTTGCAGCAGTCATCAAACTGGCTATAGGGGCAGGAGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036136.9 |
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| CDS GCA 72 bp | CGTACCGCTTCTCCTCCTTCACCAGCAGGTAGATCTTaGTCTCAGTCTCGCGCACGCCAGCAACAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RTASPPSPAGRS*SQSRARQQQLQ Trigger: CTGCAGCTGTTGCTGGCGTGCGCGAGACTGAGAGCAAGATCTACCTGCTGGTGAAGGAGGAGAAGCGGTACG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220836.2 |
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| CDS CCA 72 bp | GCAGGCGTCCTCTGTGGTCTGCTGAGGACATCCAGATaGCAGCAGGGACAGGAAAGCCAGGCTAATCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: AGVLCGLLRTSR*QQGQESQANQH Trigger: ATGCTGATTAGCCTGGCTTTCCTGTCCCTGCTGCCATCTGGATGTCCTCAGCAGACCACAGAGGACGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036136.9 ENSMUST00000220655.2 ENSMUST00000220836.2 |
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