Pregenerated sensors for COLEC10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038591Ensembl transcript IDs: ENSMUST00000036737.4
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGAGCAATTGTAAACATGAATCCAACAGGAGCCGCCCTAGGCTaGGTTTGCTCTTGGCTGCCTCTCTCTTCTTTCAGCCTTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LRAIVNMNPTGAALG*VCSWLPLSSFSLFF Trigger: AAAGAAAAGGCTGAAAGAAGAGAGAGGCAGCCAAGAGCAAACCCAGCCTAGGGCGGCTCCTGTTGGATTCATGTTTACAATTGCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR GCA 90 bp | TTCTCATCAGCGATAACCCCTACAAATCTCAGCCTCTGTAGGCAGTaGCTACAGGGATTCTGTTCACTTCATTTCTCAACTCCCCACACT | + |
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Preference number: 1 (lower is better) Translates to: FSSAITPTNLSLCRQ*LQGFCSLHFSTPHT Trigger: AGTGTGGGGAGTTGAGAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGATTTGTAGGGGTTATCGCTGATGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 90 bp | CCGCCATTTGACTTCAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTaGCATCAACAGCAGCAGCAAAGTAGTTGGTTCCTTCAAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PPFDFSSNAVVLGFW*HQQQQQSSWFLQRA Trigger: TGCTCTTTGAAGGAACCAACTACTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTGAAGTCAAATGGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 90 bp | AGGTTTGATCTGCAACTCAAGGTAAACTGTTGCCAACTCAGTCAATaGGGACTCTCAGCACATTCCAAATGCTGTGCCGGACATATCTCT | + |
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Preference number: 1 (lower is better) Translates to: RFDLQLKVNCCQLSQ*GLSAHSKCCAGHIS Trigger: AGAGATATGTCCGGCACAGCATTTGGAATGTGCTGAGAGTCCTCATTGACTGAGTTGGCAACAGTTTACCTTGAGTTGCAGATCAAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 90 bp | TTCCCGCCATTTGACTTCAGTTCAAATGCAGTGGTTCTGGGTTTTTaGTGGCATCAACAGCAGCAGCAAAGTAGTTGGTTCCTTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: FPPFDFSSNAVVLGF*WHQQQQQSSWFLQR Trigger: TCTTTGAAGGAACCAACTACTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTGAAGTCAAATGGCGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 90 bp | TTACAAACAAGTGTCAACTACATAATGTGGATTCTGGAACTTAACTaGAGTCCCCATGGGCTGTTGGCCACTGAGATATCCCTCCAGATG | + |
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Preference number: 1 (lower is better) Translates to: LQTSVNYIMWILELN*SPHGLLATEISLQM Trigger: CATCTGGAGGGATATCTCAGTGGCCAACAGCCCATGGGGACTCCAGTTAAGTTCCAGAATCCACATTATGTAGTTGACACTTGTTTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 90 bp | TGTCATCTTTCTGGATTCTGTAGGACGTGGACTTGTGAGTCTTGGTaGATTCACATAGTCAGTGCCAGTAATCTCTTCTCACCACCAGTT | + |
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Preference number: 1 (lower is better) Translates to: CHLSGFCRTWTCESW*IHIVSASNLFSPPV Trigger: AACTGGTGGTGAGAAGAGATTACTGGCACTGACTATGTGAATTCACCAAGACTCACAAGTCCACGTCCTACAGAATCCAGAAAGATGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 90 bp | GATCCCTTGAAGTTGGAATTACAAACAAGTGTCAACTACATAATGTaGATTCTGGAACTTAACTGGAGTCCCCATGGGCTGTTGGCCACT | + |
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Preference number: 1 (lower is better) Translates to: DPLKLELQTSVNYIM*ILELNWSPHGLLAT Trigger: AGTGGCCAACAGCCCATGGGGACTCCAGTTAAGTTCCAGAATCCACATTATGTAGTTGACACTTGTTTGTAATTCCAACTTCAAGGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 90 bp | ATCTATAACTTGTATCGTTTCAGAACTACCTCTCCCTTCCCCTTCTaGGTGCTAGTGTCTTCCTTCCATTATGCCAGAGGGTTAAATAGA | + |
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Preference number: 1 (lower is better) Translates to: IYNLYRFRTTSPFPF*VLVSSFHYARGLNR Trigger: TCTATTTAACCCTCTGGCATAATGGAAGGAAGACACTAGCACTCAGAAGGGGAAGGGAGAGGTAGTTCTGAAACGATACAAGTTATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 90 bp | GTGTATTTATGTGTAAAACTGTGCACATGGGAGGGTAGGTGCCCATaGAGTCCAGATAATAGTTTCTGTAGGCTCAGATTCATCAAAATC | + |
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Preference number: 1 (lower is better) Translates to: VYLCVKLCTWEGRCP*SPDNSFCRLRFIKI Trigger: GATTTTGATGAATCTGAGCCTACAGAAACTATTATCTGGACTCCATGGGCACCTACCCTCCCATGTGCACAGTTTTACACATAAATACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 90 bp | ATTGCCACAAGTCACAATAAATGGCCAGAATCATCTGGAATACCATaGGAAGGTCTTTGGCTTGTTTTATTCTACAAAGTCAAGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: IATSHNKWPESSGIP*EGLWLVLFYKVKKQ Trigger: TTGTTTCTTGACTTTGTAGAATAAAACAAGCCAAAGACCTTCTCATGGTATTCCAGATGATTCTGGCCATTTATTGTGACTTGTGGCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTAGTCCCCATGGGCTGTTaGCCACTGAGATATCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GTMLQCESNSSLLVRIHLVPMGC*PLRYPS Trigger: GGAGGGATATCTCAGTGGCCAACAGCCCATGGGGAC...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCGGGTTTGCTCTTGGCTaGCTCTCTCTTCTTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLGFALG*LSLLSA Trigger: GGCTGAAAGAAGAGAGAGGCAGCCAAGAGCAAACCC...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGGACCCAGGGAAAGGGTaGCTGTGTAACATGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RPCYLLNMHSRELSAYTRDPGKG*LCNMRK Trigger: TTTCCTCATGTTACACAGTCACCCTTTCCCTGGGTC...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCTGCCAACTCAGTCAATaGGGACTCTCAGCACATTCC | + |
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Preference number: 2 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLCQLSQ*GLSAHS Trigger: GGAATGTGCTGAGAGTCCTCATTGACTGAGTTGGCA...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCTCAAGGGTCAGAGCCCTTATaGCATTTGAGCAAAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: ISASVGSAYRDSVHFISQGSEPL*HLSKSN Trigger: ATTGCTTTTGCTCAAATGCCATAAGGGCTCTGACCC...TTGAGAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGGTGGTTCTGGGTTTTTaGTGGCATCAACAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RPCYLLNMHSRELSAYTRVVLGF*WHQQQQ Trigger: CTGCTGCTGTTGATGCCACCAAAAACCCAGAACCAC...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGCAGAAACTTCAAGGCTGGGCTGGATTGCCACAAGTCACAATAAATGGCAGAGAACACGTTGAATaGTATATTTTCAGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQQKLQGWAGLPQVTINGREHVE*YIFSWA Trigger: AGCCCAGCTGAAAATATACCATTCAACGTGTTCTCT...GCCATTTATTGTGACTTGTGGCAATCCAGCCCAGCCTTGAAGTTTCTGCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | GAACTGAACAACTCATTCATGGGAGACCTGATGTTGAAGTCATCATTTCCTAATTCTCCCTTCCCCTTCTaGGTGCTAGTGTCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: ELNNSFMGDLMLKSSFPNSPFPF*VLVSSF Trigger: GAAGGAAGACACTAGCACTCAGAAGGGGAAGGGAGA...ATTAGGAAATGATGACTTCAACATCAGGTCTCCCATGAATGAGTTGTTCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTACAAATGCAGTGGTTCTaGGTTTTTGGTGGCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: GTMLQCESNSSLLVRIHLQMQWF*VFGGIN Trigger: GTTGATGCCACCAAAAACCCAGAACCACTGCATTTG...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTAAAATTTCTCCATGAGTaGTGTATTAGCTGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GTMLQCESNSSLLVRIHLKFLHE*CISWKG Trigger: CCCCTTCCAGCTAATACATCACTCATGGAGAAATTT...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCAGATTAAAGCTGCTTTaGGGTTTGATCTGCAACTCA | + |
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Preference number: 2 (lower is better) Translates to: TNLSLCRQCLQGFCSLHFRLKLL*GLICNS Trigger: TGAGTTGCAGATCAAACCTCAAAGCAGCTTTAATCT...GAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCAGTGTTCCAATTCTCTaGGATTTTGGCTGGTATTTG | + |
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Preference number: 2 (lower is better) Translates to: TNLSLCRQCLQGFCSLHFSVPIL*DFGWYL Trigger: CAAATACCAGCCAAAATCTCAGAGAATTGGAACACT...GAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTGGCATCAACAGCAGCAGCAAAGTTAGGAAGGCAAAGATaGATAAAAGTGACTACTAGG | + |
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Preference number: 2 (lower is better) Translates to: QFKCSGSGFLVASTAAAKLGRQR*IKVTTR Trigger: CCTAGTAGTCACTTTTATCCATCTTTGCCTTCCTAA...CTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGAGCTGCTTTGAGGTTTaGTCTGCAACTCAAGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: RPCYLLNMHSRELSAYTRSCFEV*SATQGK Trigger: TTTACCTTGAGTTGCAGATCAAACCTCAAAGCAGCT...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCAATGTTCCCGCCATTTaGCTTCAGTTCAAATGCAGT | + |
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Preference number: 2 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLNVPAI*LQFKCS Trigger: ACTGCATTTGAACTGAAGTCAAATGGCGGGAACATT...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTATGTCTCCTATTGAGCTaGACTGAACAACTCATTCAT | + |
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Preference number: 2 (lower is better) Translates to: GTMLQCESNSSLLVRIHLCLLLS*TEQLIH Trigger: ATGAATGAGTTGTTCAGTTCAGCTCAATAGGAGACA...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCTCTTCCAAACTGAGATaGGTTACTGAGCGAATGACT | + |
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Preference number: 2 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLSSKLR*VTERMT Trigger: AGTCATTCGCTCAGTAACTCATCTCAGTTTGGAAGA...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCACTTTTAGAGTTTTCTaGAGGCTTGAACCCTTCACT | + |
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Preference number: 2 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLTFRVF*RLEPFT Trigger: AGTGAAGGGTTCAAGCCTTCAGAAAACTCTAAAAGT...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR TCA 90 bp | TCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGATAGGAACTTGCTTTCCTCCACATGTTTCTaGGTGTTCCAATTCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SKYAFQGTFSLYQDRNLLSSTCF*VFQFSE Trigger: CTCAGAGAATTGGAACACTCAGAAACATGTGGAGGA...AAGCAAGTTCCTATCCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR GCA 90 bp | GAACTGAACAACTCATTCATGGGAGACCTGATGTTGAAGTCATCATTTCCTAATACATTCCAAATGCTGTaGCGGACATATCTCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ELNNSFMGDLMLKSSFPNTFQML*RTYLCG Trigger: ACCACAGAGATATGTCCGGCACAGCATTTGGAATGT...ATTAGGAAATGATGACTTCAACATCAGGTCTCCCATGAATGAGTTGTTCAGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | GAACTGAACAACTCATTCATGGGAGACCTGATGTTGAAGTCATCATTTCCTAATCAGCAGCAAAGTAGTTaGTTCCTTCAAAGAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: ELNNSFMGDLMLKSSFPNQQQSS*FLQRAD Trigger: GTCTGCTCTTTGAAGGAACCAACTACTTTGCTGCTG...ATTAGGAAATGATGACTTCAACATCAGGTCTCCCATGAATGAGTTGTTCAGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CCA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTACAACACTTGGAAATATaGAATTATAATGTTCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: GTMLQCESNSSLLVRIHLQHLEI*NYNVPA Trigger: GGCGGGAACATTATAATTCCATATTTCCAAGTGTTG...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CAA 90 bp | ACTTTAGCACTTTTAGAGTTTTCTGAAGGCTTGAACCCTTCACTCTaGATTATTTATGTTGAAGGTGAAGAATGTCACAGGAACACGTTC | + |
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Preference number: 2 (lower is better) Translates to: TLALLEFSEGLNPSL*IIYVEGEECHRNTF Trigger: GAACGTGTTCCTGTGACATTCTTCACCTTCAACATAAATAATCAAGAGTGAAGGGTTCAAGCCTTCAGAAAACTCTAAAAGTGCTAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CAA 90 bp | GCTAGAGAGAGTAGCACTTTAGCACTTTTAGAGTTTTCTGAAGGCTaGAACCCTTCACTCTTGATTATTTATGTTGAAGGTGAAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: ARESSTLALLEFSEG*NPSLLIIYVEGEEC Trigger: ACATTCTTCACCTTCAACATAAATAATCAAGAGTGAAGGGTTCAAGCCTTCAGAAAACTCTAAAAGTGCTAAAGTGCTACTCTCTCTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR GCA 72 bp | AACATGAATCCAACAGGAGCCGCCCTAGGCTGGGTTTaGTCTTGGCTGCCTCTCTCTTCTTTCAGCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: NMNPTGAALGWV*SWLPLSSFSLF Trigger: GAAAAGGCTGAAAGAAGAGAGAGGCAGCCAAGAGCAAACCCAGCCTAGGGCGGCTCCTGTTGGATTCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 72 bp | GAACTTTTGCTCAGTGCTGATACAGGCGTATCACCCTaGATGAACCCACACCACCAACCTTCTCATCAGCGA | + |
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Preference number: 3 (lower is better) Translates to: ELLLSADTGVSP*MNPHHQPSHQR Trigger: TCGCTGATGAGAAGGTTGGTGGTGTGGGTTCATTCAGGGTGATACGCCTGTATCAGCACTGAGCAAAAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 72 bp | TTGTATCGTTTCAGAACTACCTCTCCCTTCCCCTTCTaGGTGCTAGTGTCTTCCTTCCATTATGCCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LYRFRTTSPFPF*VLVSSFHYARG Trigger: CCCTCTGGCATAATGGAAGGAAGACACTAGCACTCAGAAGGGGAAGGGAGAGGTAGTTCTGAAACGATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 72 bp | GGGGTTGGGGACCTGTTTAGAAGTAGTTCTTTAGGGTaGTTCCACTCTTCGTTGTCAGTATACCAGCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GVGDLFRSSSLG*FHSSLSVYQQS Trigger: GGACTGCTGGTATACTGACAACGAAGAGTGGAATCACCCTAAAGAACTACTTCTAAACAGGTCCCCAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 72 bp | ACTAGTAGTAGCATGCTCCAGCAGAAACTTCAAGGCTaGGCTGGATTGCCACAAGTCACAATAAATGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TSSSMLQQKLQG*AGLPQVTINGQ Trigger: CTGGCCATTTATTGTGACTTGTGGCAATCCAGCCCAGCCTTGAAGTTTCTGCTGGAGCATGCTACTACTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CAA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTAAGTGGTTCTGGGTTTTaGGTGGCATCAACAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GTMLQCESNSSLLVRIHLSGSGF*VASTAA Trigger: TGCTGCTGTTGATGCCACCAAAAACCCAGAACCACT...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR-3UTR CAA 90 bp | TCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGATAGGAACTTGCTTCAGCTGGGCTCGGAATaGCATAGCTGTCACCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SKYAFQGTFSLYQDRNLLQLGSE*HSCHPA Trigger: TGCTGGGTGACAGCTATGCAATTCCGAGCCCAGCTG...AAGCAAGTTCCTATCCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR GCA 72 bp | GCGATAACCCCTACAAATCTCAGCCTCTGTAGGCAGTaGCTACAGGGATTCTGTTCACTTCATTTCTCAACT | + |
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Preference number: 3 (lower is better) Translates to: AITPTNLSLCRQ*LQGFCSLHFST Trigger: AGTTGAGAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGATTTGTAGGGGTTATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 72 bp | TCCCGCCATTTGACTTCAGTTCAAATGCAGTGGTTCTaGGTTTTTGGTGGCATCAACAGCAGCAGCAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: SRHLTSVQMQWF*VFGGINSSSKV Trigger: TACTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTGAAGTCAAATGGCGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 72 bp | AGTGTCAACTACATAATGTGGATTCTGGAACTTAACTaGAGTCCCCATGGGCTGTTGGCCACTGAGATATCC | + |
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Preference number: 3 (lower is better) Translates to: SVNYIMWILELN*SPHGLLATEIS Trigger: GGATATCTCAGTGGCCAACAGCCCATGGGGACTCCAGTTAAGTTCCAGAATCCACATTATGTAGTTGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 72 bp | AAAAGTGTTACACAGCCAGCAAAGACCAGCAGAGCATaGCACAATGTTGCAATGCGAGAGCAACTCTTCACT | + |
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Preference number: 3 (lower is better) Translates to: KSVTQPAKTSRA*HNVAMREQLFT Trigger: AGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCCATGCTCTGCTGGTCTTTGCTGGCTGTGTAACACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR CCA 72 bp | TGTGTAAAACTGTGCACATGGGAGGGTAGGTGCCCATaGAGTCCAGATAATAGTTTCTGTAGGCTCAGATTC | + |
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Preference number: 3 (lower is better) Translates to: CVKLCTWEGRCP*SPDNSFCRLRF Trigger: GAATCTGAGCCTACAGAAACTATTATCTGGACTCCATGGGCACCTACCCTCCCATGTGCACAGTTTTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| 3UTR TCA 72 bp | GAAGAGTCACAGTCAGCAATGACATTCAGGCAGCTGTaGTGGCCAGATCTAGAGTTTGAACTTTTGCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EESQSAMTFRQL*WPDLEFELLLS Trigger: ACTGAGCAAAAGTTCAAACTCTAGATCTGGCCATCACAGCTGCCTGAATGTCATTGCTGACTGTGACTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CCA 72 bp | GACTTCAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTaGCATCAACAGCAGCAGCAAAGTAGTTGGTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DFSSNAVVLGFW*HQQQQQSSWFL Trigger: AAGGAACCAACTACTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTGAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CCA 72 bp | CCTAAAAGAGAACACGTTGAATGGTATATTTTCAGCTaGGCTCGGAATTGCATAGCTGTCACCCAGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: PKREHVEWYIFS*ARNCIAVTQHP Trigger: TGGATGCTGGGTGACAGCTATGCAATTCCGAGCCCAGCTGAAAATATACCATTCAACGTGTTCTCTTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTGGCATCAACAGCAGCAGCAAAGGAGCCCTTATGGCATTaGAGCAAAAGCAATGTAATT | + |
|
Preference number: 3 (lower is better) Translates to: QFKCSGSGFLVASTAAAKEPLWH*SKSNVI Trigger: AATTACATTGCTTTTGCTCAAATGCCATAAGGGCTC...CTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | TCTGGATTCTGTAGGACGTGGACTTGTGAGTCTTGGTaGATTCACATAGTCAGTGCCAGTAATCTCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGFCRTWTCESW*IHIVSASNLFS Trigger: TGAGAAGAGATTACTGGCACTGACTATGTGAATTCACCAAGACTCACAAGTCCACGTCCTACAGAATCCAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR GCA 72 bp | CATTTCTCAACTCCCCACACTCCAGCACATAGACCTTaGTACCTTCTAAATATGCATTCCAGGGAACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HFSTPHTPAHRP*YLLNMHSRELS Trigger: TGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCTATGTGCTGGAGTGTGGGGAGTTGAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR GCA 72 bp | TATTTATGTGTAAAACTGTGCACATGGGAGGGTAGGTaGCCATGGAGTCCAGATAATAGTTTCTGTAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: YLCVKLCTWEGR*PWSPDNSFCRL Trigger: GAGCCTACAGAAACTATTATCTGGACTCCATGGGCACCTACCCTCCCATGTGCACAGTTTTACACATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CCA 72 bp | TTTGACTTCAGTTCAAATGCAGTGGTTCTGGGTTTTTaGTGGCATCAACAGCAGCAGCAAAGTAGTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FDFSSNAVVLGF*WHQQQQQSSWF Trigger: GAACCAACTACTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTGAAGTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | GGGTTCTTAAATGTGTCCATCTTCATTCTAGCCCCCTaGACAAGAGGTAGAGGAGAAAGATGGTTAATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GFLNVSIFILAP*TRGRGERWLIG Trigger: TCCTATTAACCATCTTTCTCCTCTACCTCTTGTTCAGGGGGCTAGAATGAAGATGGACACATTTAAGAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCCAATTCTCTGAGATTTaGGCTGGTATTTGGCGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLQFSEI*AGIWRD Trigger: ATCACGCCAAATACCAGCCAAAATCTCAGAGAATTG...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR GCA 72 bp | ATAACATACATCAAACATGAATTACTAGTAGTAGCATaGTCCAGCAGAAACTTCAAGGCTGGGCTGGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: ITYIKHELLVVA*SSRNFKAGLDC Trigger: GCAATCCAGCCCAGCCTTGAAGTTTCTGCTGGAGCATGCTACTACTAGTAATTCATGTTTGATGTATGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGGATAGATCTTATTCCTaGAAACTGTCATCTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPCYLLNMHSRELSAYTRDRSYS*KLSSTL Trigger: CAGAGTAGATGACAGTTTCAAGGAATAAGATCTATC...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | CACTTGGAAATATGGAATTATAATGTTCCCGCCATTTaGCTTCAGTTCAAATGCAGTGGTTCTGGGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HLEIWNYNVPAI*LQFKCSGSGFL Trigger: CAAAAACCCAGAACCACTGCATTTGAACTGAAGTCAAATGGCGGGAACATTATAATTCCATATTTCCAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR GCA 72 bp | TGTGAGGATTCATTTATATGCTTTCTAAACATCACGTaGCCTCTGAGGTGTCTGTTTTCAGCAAAACATCAT | + |
|
Preference number: 3 (lower is better) Translates to: CEDSFICFLNIT*PLRCLFSAKHH Trigger: ATGATGTTTTGCTGAAAACAGACACCTCAGAGGGCACGTGATGTTTAGAAAGCATATAAATGAATCCTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | ATGTTGAAGGTGAAGAATGTCACAGGAACACGTTCATaGAATAAAATGGAGTCATTAATAGCAGGGGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: MLKVKNVTGTRS*NKMESLIAGDN Trigger: ATTGTCCCCTGCTATTAATGACTCCATTTTATTTCATGAACGTGTTCCTGTGACATTCTTCACCTTCAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | CTGATAAATGTCAAAGATTTAACAAATGTCTCCTATTaGGCTGAACTGAACAACTCATTCATGGGAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LINVKDLTNVSY*AELNNSFMGDL Trigger: CAGGTCTCCCATGAATGAGTTGTTCAGTTCAGCTCAATAGGAGACATTTGTTAAATCTTTGACATTTATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | AGTCACAATAAATGGCCAGAATCATCTGGAATACCATaGGAAGGTCTTTGGCTTGTTTTATTCTACAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SHNKWPESSGIP*EGLWLVLFYKV Trigger: GACTTTGTAGAATAAAACAAGCCAAAGACCTTCTCATGGTATTCCAGATGATTCTGGCCATTTATTGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | AAATGTCAAAGATTTAACAAATGTCTCCTATTGAGCTaGACTGAACAACTCATTCATGGGAGACCTGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: KCQRFNKCLLLS*TEQLIHGRPDV Trigger: AACATCAGGTCTCCCATGAATGAGTTGTTCAGTTCAGCTCAATAGGAGACATTTGTTAAATCTTTGACATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR TCA 72 bp | AAATACAGACTGAATGAGCATCTGCTAGAATCACCGTaGAACACATCCCTATACTATATAAAGGTTTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: KYRLNEHLLESP*NTSLYYIKVYV Trigger: TACATAAACCTTTATATAGTATAGGGATGTGTTTCACGGTGATTCTAGCAGATGCTCATTCAGTCTGTATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR TCA 90 bp | ATGAGGACTCTCAGCACATTCCAAATGCTGTGCCGGACATATCTCTGTGGTGTCTCCAGACCCAGACTCTaGAAGTGCAAGAGAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRTLSTFQMLCRTYLCGVSRPRL*KCKRAS Trigger: GCTAGCTCTCTTGCACTTTCAGAGTCTGGGTCTGGA...GACACCACAGAGATATGTCCGGCACAGCATTTGGAATGTGCTGAGAGTCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR TCA 90 bp | ATGAGGACTCTCAGCACATTCCAAATGCTGTGCCGGACATATCTCTGTGGTGTCACAGACTTCTGCAGCTaGTCGACTATCAACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRTLSTFQMLCRTYLCGVTDFCS*STINIQ Trigger: CTGGATGTTGATAGTCGATCAGCTGCAGAAGTCTGT...GACACCACAGAGATATGTCCGGCACAGCATTTGGAATGTGCTGAGAGTCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR GCA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTACCTGGCGTCCCACTTTaGCATCCTTGCCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTMLQCESNSSLLVRIHLPGVPL*HPCLLL Trigger: GAGAAGAAGGCAAGGATGGCAAAGTGGGACGCCAGG...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTGGCATCAACAGCAGCAGCAAAGCCACTTTCCGGTACCTaGCACAATCACAGATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QFKCSGSGFLVASTAAAKPLSGT*HNHRWY Trigger: GTACCATCTGTGATTGTGGCAGGTACCGGAAAGTGG...CTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR GCA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGTCCCTCCTCGGATCCTaGAGTGGGTCAGAGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPCYLLNMHSRELSAYTRSLLGS*SGSEIP Trigger: GGGAATCTCTGACCCACTGCAGGATCCGAGGAGGGA...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTGGCATCAACAGCAGCAGCAAAGTTGCCAATATTACCCTaGGCTCCCATATCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFKCSGSGFLVASTAAAKLPILP*APISPS Trigger: GCTGGGTGATATGGGAGCCCAGGGTAATATTGGCAA...CTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CCA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCTCCACACAGTCCTCATaGCCGGAGGGGTCACTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLSTQSS*PEGSLG Trigger: ACCTAGTGACCCCTCCGGCCATGAGGACTGTGTGGA...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTGGCATCAACAGCAGCAGCAAAGTCTGTGAACACATATTaGCCCTCCCTCTCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QFKCSGSGFLVASTAAAKSVNTY*PSLSRS Trigger: TGACCTTGAGAGGGAGGGGCAATATGTGTTCACAGA...CTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCTCAACCTCCTCCTTCCAGTTaGTGTAGTTCTGCAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISASVGSAYRDSVHFISQPPPSS*CSSAME Trigger: CTCCATTGCAGAACTACAGCAACTGGAAGGAGGAGG...TTGAGAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGACTCCTTTTGGTCCCTaGCGTCCCACTTTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPCYLLNMHSRELSAYTRTPFGP*RPTLPS Trigger: GGATGGCAAAGTGGGACGCCAGGGACCAAAAGGAGT...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCTCAATCCTTTCACTCCTTTTaGTCCCTGGCGTCCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISASVGSAYRDSVHFISQSFHSF*SLASHF Trigger: AAAGTGGGACGCCAGGGACCAAAAGGAGTGAAAGGA...TTGAGAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR GCA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTACTGTGTCATTCCACCTaGCAGAGCTCAACATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTMLQCESNSSLLVRIHLLCHST*QSSTSP Trigger: TGGAGATGTTGAGCTCTGGCAGGTGGAATGACACAG...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR TCA 90 bp | ATAAGGCAAGAAGATTTCGAGTTCAAGGACAGCCTGGGCTATATAATGACACTCCCCTTTAGGTCCTGGTaGAATGGTATGTGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IRQEDFEFKDSLGYIMTLPFRSW*NGMCGT Trigger: TGTGCCACACATACCATTTCACCAGGACCTAAAGGG...GAGTGTCATTATATAGCCCAGGCTGTCCTTGAACTCGAAATCTTCTTGCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCTCAATGCCACAATCACAGATaGTACCTGCTTTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISASVGSAYRDSVHFISQCHNHR*YLLCLF Trigger: AAAAAGGCAAAGCAGGTACCATCTGTGATTGTGGCA...TTGAGAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CAA 72 bp | AGCAGGGGACAATTTAACAGAAGGCCTATCTATAACTaGTATCGTTTCAGAACTACCTCTCCCTTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGQFNRRPIYN*YRFRTTSPFPF Trigger: GAAGGGGAAGGGAGAGGTAGTTCTGAAACGATACAAGTTATAGATAGGCCTTCTGTTAAATTGTCCCCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR TCA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGAAATACATGGTAAGGTaGCACTCTGTGTCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPCYLLNMHSRELSAYTRKYMVR*HSVSFH Trigger: GTGGAATGACACAGAGTGTCACCTTACCATGTATTT...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CCA 90 bp | GAACTGAACAACTCATTCATGGGAGACCTGATGTTGAAGTCATCATTTCCTAATGTGAAATGGTATGTGTaGCACAGACTTCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELNNSFMGDLMLKSSFPNVKWYV*HRLLQL Trigger: CAGCTGCAGAAGTCTGTGCCACACATACCATTTCAC...ATTAGGAAATGATGACTTCAACATCAGGTCTCCCATGAATGAGTTGTTCAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR GCA 90 bp | TCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGATAGGAACTTGCTTATCACAGATGGTACCTaGTTTGCCTTTTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKYAFQGTFSLYQDRNLLITDGT*FAFFSR Trigger: CCTGGAGAAAAAGGCAAAGCAGGTACCATCTGTGAT...AAGCAAGTTCCTATCCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CAA 72 bp | CAGAAACTTCCACCTCAGGTGTTAGATCCCTTGAAGTaGGAATTACAAACAAGTGTCAACTACATAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLPPQVLDPLK*ELQTSVNYIMW Trigger: CCACATTATGTAGTTGACACTTGTTTGTAATTCCAACTTCAAGGGATCTAACACCTGAGGTGGAAGTTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CAA 72 bp | AAGTTCTTCCAGGCAGAAATGGATAGATCTTATTCCTaGAAACTGTCATCTACTCTGAGAAGTGTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KFFQAEMDRSYS*KLSSTLRSVFQ Trigger: TTGGAAGACACTTCTCAGAGTAGATGACAGTTTCAAGGAATAAGATCTATCCATTTCTGCCTGGAAGAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CAA 72 bp | CTTTTAGAGTTTTCTGAAGGCTTGAACCCTTCACTCTaGATTATTTATGTTGAAGGTGAAGAATGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLEFSEGLNPSL*IIYVEGEECHR Trigger: CCTGTGACATTCTTCACCTTCAACATAAATAATCAAGAGTGAAGGGTTCAAGCCTTCAGAAAACTCTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CAA 72 bp | CAGAATCATCTGGAATACCATGAGAAGGTCTTTGGCTaGTTTTATTCTACAAAGTCAAGAAACAAAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNHLEYHEKVFG*FYSTKSRNKDQ Trigger: CTGGTCTTTGTTTCTTGACTTTGTAGAATAAAACAAGCCAAAGACCTTCTCATGGTATTCCAGATGATTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| 3UTR CAA 72 bp | AGTAGCACTTTAGCACTTTTAGAGTTTTCTGAAGGCTaGAACCCTTCACTCTTGATTATTTATGTTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTLALLEFSEG*NPSLLIIYVEG Trigger: ACCTTCAACATAAATAATCAAGAGTGAAGGGTTCAAGCCTTCAGAAAACTCTAAAAGTGCTAAAGTGCTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS CCA 90 bp | TTGTCACCCTTCTTGCCAATAGGGCCAGACTTGCCAATATTACCCTaGGCTCCCATATCACCCAGCTCTCCTTTCACTCCTTTTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSPFLPIGPDLPILP*APISPSSPFTPFGP Trigger: GGGACCAAAAGGAGTGAAAGGAGAGCTGGGTGATATGGGAGCCCAGGGTAATATTGGCAAGTCTGGCCCTATTGGCAAGAAGGGTGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CAA 90 bp | ACAAATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCCTCCTTTCACTCCTTTaGGTCCCTGGCGTCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TNLSLCRQCLQGFCSLHFLLSLL*VPGVPL Trigger: AAGTGGGACGCCAGGGACCAAAAGGAGTGAAAGGAG...GAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS TCA 90 bp | CAGACTTCTGCAGCTGATCGACTATCAACATCCAGACCCAGACTCTaGAAGTGCAAGAGAGCTAGCAGCAACAGCATGGATAGGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QTSAADRLSTSRPRL*KCKRASSNSMDRLL Trigger: AAGCAACCTATCCATGCTGTTGCTGCTAGCTCTCTTGCACTTTCAGAGTCTGGGTCTGGATGTTGATAGTCGATCAGCTGCAGAAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CAA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGCCCTGGCGTCCCACTTaGCCATCCTTGCCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPCYLLNMHSRELSAYTRPWRPT*PSLPSS Trigger: AGAAGAAGGCAAGGATGGCAAAGTGGGACGCCAGGG...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAAATGCAGTGGTTCTGGGTTTTTGGTGGCATCAACAGCAGCAGCAAAGTTAACGACTTCATCCTaGGGCATGGCTAGCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QFKCSGSGFLVASTAAAKLTTSS*GMASIP Trigger: AGGGATGCTAGCCATGCCCAAGGATGAAGTCGTTAA...CTTTGCTGCTGCTGTTGATGCCACCAAAAACCCAGAACCACTGCATTTGAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CAA 90 bp | ACAAATCTCAGCCTCTGTAGGCAGTGCCTACAGGGATTCTGTTCACTTCATTTCTCCCTCTCAAGGTCATaGACCCCAATGAACACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TNLSLCRQCLQGFCSLHFSLSRS*TPMNTL Trigger: CAGAGTGTTCATTGGGGTCAATGACCTTGAGAGGGA...GAAATGAAGTGAACAGAATCCCTGTAGGCACTGCCTACAGAGGCTGAGATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
||
| CDS-3UTR CAA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTAATCTGTGAACACATATaGCCCCTCCCTCTCAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: GTMLQCESNSSLLVRIHLICEHI*PLPLKV Trigger: GACCTTGAGAGGGAGGGGCAATATGTGTTCACAGAT...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS-3UTR CAA 90 bp | GGCACAATGTTGCAATGCGAGAGCAACTCTTCACTGCTTGTGAGGATTCATTTAAGACCCTTTTCCCCTTaGTCACCCTTCTTGCCAATA | + |
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Preference number: 5 (lower is better) Translates to: GTMLQCESNSSLLVRIHLRPFSP*SPFLPI Trigger: TATTGGCAAGAAGGGTGACAAAGGGGAAAAGGGTCT...TAAATGAATCCTCACAAGCAGTGAAGAGTTGCTCTCGCATTGCAACATTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS-3UTR CAA 90 bp | AGACCTTGCTACCTTCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGCAGATGGTACCTGCTTaGCCTTTTTCTCCAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: RPCYLLNMHSRELSAYTRQMVPA*PFSPGI Trigger: AATTCCTGGAGAAAAAGGCAAAGCAGGTACCATCTG...CCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGAAGGTAGCAAGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS-3UTR CAA 90 bp | TCTAAATATGCATTCCAGGGAACTTTCAGCTTATACCAGGATAGGAACTTGCTTAACACTAATATCCAGTaGTCCAACCACTTTCCGGTA | + |
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Preference number: 5 (lower is better) Translates to: SKYAFQGTFSLYQDRNLLNTNIQ*SNHFPV Trigger: TACCGGAAAGTGGTTGGACAACTGGATATTAGTGTT...AAGCAAGTTCCTATCCTGGTATAAGCTGAAAGTTCCCTGGAATGCATATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS CAA 72 bp | TCTCCTTTCACTCCTTTTGGTCCCTGGCGTCCCACTTaGCCATCCTTGCCTTCTTCTCCTGTGTCACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SPFTPFGPWRPT*PSLPSSPVSPL Trigger: AAGAGGTGACACAGGAGAAGAAGGCAAGGATGGCAAAGTGGGACGCCAGGGACCAAAAGGAGTGAAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS CCA 72 bp | TTCTTGCCAATAGGGCCAGACTTGCCAATATTACCCTaGGCTCCCATATCACCCAGCTCTCCTTTCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: FLPIGPDLPILP*APISPSSPFTP Trigger: AGGAGTGAAAGGAGAGCTGGGTGATATGGGAGCCCAGGGTAATATTGGCAAGTCTGGCCCTATTGGCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS TCA 72 bp | GCAGCTGATCGACTATCAACATCCAGACCCAGACTCTaGAAGTGCAAGAGAGCTAGCAGCAACAGCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: AADRLSTSRPRL*KCKRASSNSMD Trigger: ATCCATGCTGTTGCTGCTAGCTCTCTTGCACTTTCAGAGTCTGGGTCTGGATGTTGATAGTCGATCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS CAA 90 bp | CCAGTTGCTGTAGTTCTGCAATGGAGTGTTATCTGTGAACACATATaGCCCCTCCCTCTCAAGGTCATTGACCCCAATGAACACTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PVAVVLQWSVICEHI*PLPLKVIDPNEHSE Trigger: TTCAGAGTGTTCATTGGGGTCAATGACCTTGAGAGGGAGGGGCAATATGTGTTCACAGATAACACTCCATTGCAGAACTACAGCAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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| CDS CAA 72 bp | GTAGTTCTGCAATGGAGTGTTATCTGTGAACACATATaGCCCCTCCCTCTCAAGGTCATTGACCCCAATGAA | + |
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Preference number: 6 (lower is better) Translates to: VVLQWSVICEHI*PLPLKVIDPNE Trigger: TTCATTGGGGTCAATGACCTTGAGAGGGAGGGGCAATATGTGTTCACAGATAACACTCCATTGCAGAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036737.4 |
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