Pregenerated sensors for COLCA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079559Ensembl transcript IDs: ENSMUST00000114427.4, ENSMUST00000215038.3, ENSMUST00000239415.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGGAAGTGTCATCAAGATaGAGTAGAGAAAGAGATAGA | + |
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Preference number: 2 (lower is better) Translates to: GHCVDSYASSQVIENGETEVSSR*SRERDR Trigger: TCTATCTCTTTCTCTACTGCATCTTGATGACACTTC...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGTGTGAAAGGGTTGAATaGTTGAAGTGTCATCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: GHCVDSYASSQVIENGETCERVE*LKCHQD Trigger: ATCTTGATGACACTTCAACCATTCAACCCTTTCACA...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR-3UTR TCA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACACGCTAGCTCTCAGGTaGTTGAAAATGGTGAAACGT | + |
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Preference number: 2 (lower is better) Translates to: YKRVCLLYREGRHWKKPYTLALR*LKMVKR Trigger: ACGTTTCACCATTTTCAATCACCTGAGAGCTAGCGT...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCAACGCTAGCTCTCAGGTaGTTGAAAATGGTGAAACGT | + |
|
Preference number: 2 (lower is better) Translates to: VYKRVCLLYREGRHWKKPTLALR*LKMVKR Trigger: ACGTTTCACCATTTTCAATCACCTGAGAGCTAGCGT...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAGAAGTGTCATCAAGATaGAGTAGAGAAAGAGATAGA | + |
|
Preference number: 2 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTEVSSR*SRERDR Trigger: TCTATCTCTTTCTCTACTGCATCTTGATGACACTTC...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATGTGAAAGGGTTGAATaGTTGAAGTGTCATCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VYKRVCLLYREGRHWKKPCERVE*LKCHQD Trigger: ATCTTGATGACACTTCAACCATTCAACCCTTTCACA...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAGAAAGGGTTGAATGGTaGAAGTGTCATCAAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTERVEW*KCHQDA Trigger: TGCATCTTGATGACACTTCAACCATTCAACCCTTTC...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR-3UTR CAA 90 bp | TTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATAGAAAGGGTTGAATGGTaGAAGTGTCATCAAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LQKSLFVIPRRKALEKAIERVEW*KCHQDA Trigger: TGCATCTTGATGACACTTCAACCATTCAACCCTTTC...TATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCGGTTTGCCCCTGAGGTaGCCTGGTGTGCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DCHKTKFEGIVLTPTLALGLPLR*PGVPFF Trigger: AAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACC...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR TCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGCAATCTGTGCAGAGTTaGGCAAAGGCTCCGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHCVDSYASSQVIENGETQSVQS*AKAPGV Trigger: CACTCCCGGAGCCTTTGCTCAACTCTGCACAGATTG...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCCTCTGCCTCACAGGATaGATAGTAGCAGACCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DCHKTKFEGIVLTPTLALLCLTG*IVADRG Trigger: TCCTCGGTCTGCTACTATGCATCCTGTGAGGCAGAG...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGCTGAGGGCATCCAGATaGTCTGCCTCACAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHCVDSYASSQVIENGETLRASR*SASQDA Trigger: TGCATCCTGTGAGGCAGAGCATCTGGATGCCCTCAG...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCTGGTGTGCCCTTCTTTaGTGCAGAAGCTCTTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: DCHKTKFEGIVLTPTLALWCALL*CRSSFT Trigger: CGTGAAAGAGCTTCTGCAGCAAAGAAGGGCACACCA...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGCTCTGCCTCACAGGATaGATAGTAGCAGACCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHCVDSYASSQVIENGETLCLTG*IVADRG Trigger: TCCTCGGTCTGCTACTATGCATCCTGTGAGGCAGAG...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGCAGTCCTGCGGAAGATaGCATGGTAGTGTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHCVDSYASSQVIENGETQSCGR*HGSVWK Trigger: CTTCCAGACACTACCATGCCATCTTCCGCAGGACTG...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATCGAGGAGGGGGTGGCTaGGGACGAGTGGTTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDRGGGG*GRVVVL Trigger: CAGTACAACCACTCGTCCCCAGCCACCCCCTCCTCG...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGTGGTGTGCCCTTCTTTaGTGCAGAAGCTCTTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GHCVDSYASSQVIENGETWCALL*CRSSFT Trigger: CGTGAAAGAGCTTCTGCAGCAAAGAAGGGCACACCA...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACACGAGGAGGGGGTGGCTaGGGACGAGTGGTTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTRGGGG*GRVVVL Trigger: CAGTACAACCACTCGTCCCCAGCCACCCCCTCCTCG...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAAGACCGAGGAGGGGGTaGCTGGGGACGAGTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTRPRRG*LGTSGC Trigger: ACAACCACTCGTCCCCAGCCACCCCCTCCTCGGTCT...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAGACCGAGGAGGGGGTaGCTGGGGACGAGTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKRVCLLYREGRHWKKPYRPRRG*LGTSGC Trigger: ACAACCACTCGTCCCCAGCCACCCCCTCCTCGGTCT...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATGGTTTGCCCCTGAGGTaGCCTGGTGTGCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDGLPLR*PGVPFF Trigger: AAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACC...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGGGGTGTGGAAGACGTTaGTTCAGGCTCAAAATACAG | + |
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Preference number: 4 (lower is better) Translates to: GHCVDSYASSQVIENGETGCGRR*FRLKIQ Trigger: CTGTATTTTGAGCCTGAACCAACGTCTTCCACACCC...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATCCTGGAATCAGGCTCTaGTTGTGGCAGAAAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDPGIRL*LWQKGA Trigger: GGCCCCTTTCTGCCACAACCAGAGCCTGATTCCAGG...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | TTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATCGAGGAGGGGGTGGCTaGGGACGAGTGGTTGTACTG | + |
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Preference number: 4 (lower is better) Translates to: FTKEFVCYTEKEGTGKSHRGGGG*GRVVVL Trigger: CAGTACAACCACTCGTCCCCAGCCACCCCCTCCTCG...ATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | TCAAGATGCAGTAGAGAAAGAGATAGACTCATGACACATTCTATCATGGTTTCTAGACCGAGGAGGGGGTaGCTGGGGACGAGTGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SRCSRERDRLMTHSIMVSRPRRG*LGTSGC Trigger: ACAACCACTCGTCCCCAGCCACCCCCTCCTCGGTCT...AGAAACCATGATAGAATGTGTCATGAGTCTATCTCTTTCTCTACTGCATCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR TCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATCAATCTGTGCAGAGTTaGGCAAAGGCTCCGGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDQSVQS*AKAPGV Trigger: CACTCCCGGAGCCTTTGCTCAACTCTGCACAGATTG...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGGAGTTGGTGAGTAACTaGAATCAAAGGAGCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GHCVDSYASSQVIENGETELVSN*NQRSQR Trigger: TCTCTGGCTCCTTTGATTGCAGTTACTCACCAACTC...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATCTGAGGGCATCCAGATaGTCTGCCTCACAGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDLRASR*SASQDA Trigger: TGCATCCTGTGAGGCAGAGCATCTGGATGCCCTCAG...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATGTAGTGTCTGGAAGGTaGAGACCGCTGCTTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDVVSGR*RPLLPD Trigger: GTCAGGAAGCAGCGGTCTCCACCTTCCAGACACTAC...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACACCTGGAATCAGGCTCTaGTTGTGGCAGAAAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTPGIRL*LWQKGA Trigger: GGCCCCTTTCTGCCACAACCAGAGCCTGATTCCAGG...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACCCTGGAATCAGGCTCTaGTTGTGGCAGAAAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: YKRVCLLYREGRHWKKPYPGIRL*LWQKGA Trigger: GGCCCCTTTCTGCCACAACCAGAGCCTGATTCCAGG...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACCTGAGGGCATCCAGATaGTCTGCCTCACAGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: YKRVCLLYREGRHWKKPYLRASR*SASQDA Trigger: TGCATCCTGTGAGGCAGAGCATCTGGATGCCCTCAG...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | TTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATAGGTTTGCCCCTGAGGTaGCCTGGTGTGCCCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LQKSLFVIPRRKALEKAIGLPLR*PGVPFF Trigger: AAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACC...TATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | CAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAAGTAGTGTCTGGAAGGTaGAGACCGCTGCTTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: QKSLFVIPRRKALEKAIQVVSGR*RPLLPD Trigger: GTCAGGAAGCAGCGGTCTCCACCTTCCAGACACTAC...TTGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCCACAAGAGACACAGGTaGAAAATTCTCGAGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: DCHKTKFEGIVLTPTLALHKRHR*KILEFE Trigger: TTCAAACTCGAGAATTTTCCACCTGTGTCTCTTGTG...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | CAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAAATCCGAAGGCGACCCTaGAATCAGGCTCTGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: QKSLFVIPRRKALEKAIQIRRRP*NQALVV Trigger: CACAACCAGAGCCTGATTCCAGGGTCGCCTTCGGAT...TTGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCAAGAAATCGCCAGTGGTaGCCACAGGAGGGGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: VYKRVCLLYREGRHWKKPRNRQW*PQEGQS Trigger: ACTTTGCCCCTCCTGTGGCCACCACTGGCGATTTCT...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAAGAAATCGCCAGTGGTaGCCACAGGAGGGGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTRNRQW*PQEGQS Trigger: ACTTTGCCCCTCCTGTGGCCACCACTGGCGATTTCT...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR TCA 90 bp | TCAAGATGCAGTAGAGAAAGAGATAGACTCATGACACATTCTATCATGGTTTCTCAATCTGTGCAGAGTTaGGCAAAGGCTCCGGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: SRCSRERDRLMTHSIMVSQSVQS*AKAPGV Trigger: CACTCCCGGAGCCTTTGCTCAACTCTGCACAGATTG...AGAAACCATGATAGAATGTGTCATGAGTCTATCTCTTTCTCTACTGCATCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR GCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATTGGTGTGCCCTTCTTTaGTGCAGAAGCTCTTTCACG | + |
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Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDWCALL*CRSSFT Trigger: CGTGAAAGAGCTTCTGCAGCAAAGAAGGGCACACCA...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCACAGTCCTGCGGAAGATaGCATGGTAGTGTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYKRVCLLYREGRHWKKPQSCGR*HGSVWK Trigger: CTTCCAGACACTACCATGCCATCTTCCGCAGGACTG...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACCAGTCCTGCGGAAGATaGCATGGTAGTGTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKRVCLLYREGRHWKKPYQSCGR*HGSVWK Trigger: CTTCCAGACACTACCATGCCATCTTCCGCAGGACTG...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | TTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATAATCCGAAGGCGACCCTaGAATCAGGCTCTGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQKSLFVIPRRKALEKAIIRRRP*NQALVV Trigger: CACAACCAGAGCCTGATTCCAGGGTCGCCTTCGGAT...TATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | TTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATAAGAAATCGCCAGTGGTaGCCACAGGAGGGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQKSLFVIPRRKALEKAIRNRQW*PQEGQS Trigger: ACTTTGCCCCTCCTGTGGCCACCACTGGCGATTTCT...TATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAATATAGAAATCGCCAGTaGTGGCCACAGGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSLFVIPRRKALEKAIQYRNRQ*WPQEGQ Trigger: TTGCCCCTCCTGTGGCCACCACTGGCGATTTCTATA...TTGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR GCA 90 bp | TTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACTCTGCCTCACAGGATaGATAGTAGCAGACCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQKSLFVIPRRKALEKAILCLTG*IVADRG Trigger: TCCTCGGTCTGCTACTATGCATCCTGTGAGGCAGAG...TATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAAGGCATCCAGATGCTCTaGCTCACAGGATGCATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKSLFVIPRRKALEKAIQGIQML*LTGCIV Trigger: TACTATGCATCCTGTGAGGCAGAGCATCTGGATGCC...TTGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACGGCATCCAGATGCTCTaGCTCACAGGATGCATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YKRVCLLYREGRHWKKPYGIQML*LTGCIV Trigger: TACTATGCATCCTGTGAGGCAGAGCATCTGGATGCC...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAGGCATCCAGATGCTCTaGCTCACAGGATGCATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTGIQML*LTGCIV Trigger: TACTATGCATCCTGTGAGGCAGAGCATCTGGATGCC...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATTATAGAAATCGCCAGTaGTGGCCACAGGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTKEFVCYTEKEGTGKSHYRNRQ*WPQEGQ Trigger: TTGCCCCTCCTGTGGCCACCACTGGCGATTTCTATA...ATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR GCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATGAGTTGGTGAGTAACTaGAATCAAAGGAGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDELVSN*NQRSQR Trigger: TCTCTGGCTCCTTTGATTGCAGTTACTCACCAACTC...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCAGGGTGTGGAAGACGTTaGTTCAGGCTCAAAATACAG | + |
|
Preference number: 4 (lower is better) Translates to: VYKRVCLLYREGRHWKKPGCGRR*FRLKIQ Trigger: CTGTATTTTGAGCCTGAACCAACGTCTTCCACACCC...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATGAAAATAACTGGGTGTaGAAGACGTTGGTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDENNWV*KTLVQA Trigger: AGCCTGAACCAACGTCTTCCACACCCAGTTATTTTC...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCACACTTGACAGCTCTCTaGGAAATAGTGGGGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VYKRVCLLYREGRHWKKPHLTAL*EIVGSN Trigger: ATTGCTCCCCACTATTTCCCAGAGAGCTGTCAAGTG...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAACACTTGACAGCTCTCTaGGAAATAGTGGGGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKSLFVIPRRKALEKAIQHLTAL*EIVGSN Trigger: ATTGCTCCCCACTATTTCCCAGAGAGCTGTCAAGTG...TTGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACCTCAAAATACAGTCCTaGGGAAGATGGCATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKRVCLLYREGRHWKKPYLKIQS*GRWHGS Trigger: ACTACCATGCCATCTTCCGCAGGACTGTATTTTGAG...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR GCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCACTCAAAATACAGTCCTaGGGAAGATGGCATGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VYKRVCLLYREGRHWKKPLKIQS*GRWHGS Trigger: ACTACCATGCCATCTTCCGCAGGACTGTATTTTGAG...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAGAAAATAACTGGGTGTaGAAGACGTTGGTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTENNWV*KTLVQA Trigger: AGCCTGAACCAACGTCTTCCACACCCAGTTATTTTC...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | TCAAGATGCAGTAGAGAAAGAGATAGACTCATGACACATTCTATCATGGTTTCTCACTTGACAGCTCTCTaGGAAATAGTGGGGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRCSRERDRLMTHSIMVSHLTAL*EIVGSN Trigger: ATTGCTCCCCACTATTTCCCAGAGAGCTGTCAAGTG...AGAAACCATGATAGAATGTGTCATGAGTCTATCTCTTTCTCTACTGCATCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGATGCAGTAGAGAAAGAGATAGACTCATGACACATTCTATCATGGTTTCTGAAAATAACTGGGTGTaGAAGACGTTGGTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCSRERDRLMTHSIMVSENNWV*KTLVQA Trigger: AGCCTGAACCAACGTCTTCCACACCCAGTTATTTTC...AGAAACCATGATAGAATGTGTCATGAGTCTATCTCTTTCTCTACTGCATCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATCACAAGAGACACAGGTaGAAAATTCTCGAGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TICGVVCERVEWLKCHQDHKRHR*KILEFE Trigger: TTCAAACTCGAGAATTTTCCACCTGTGTCTCTTGTG...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| 3UTR CAA 72 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTaGAAGTGTCATCAAGATGCAGTAGAGAAAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TICGVVCERVEW*KCHQDAVEKEI Trigger: TATCTCTTTCTCTACTGCATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAGAGTTTGAAAATAACTaGGTGTGGAAGACGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTEFENN*VWKTLV Trigger: AACCAACGTCTTCCACACCCAGTTATTTTCAAACTC...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | CAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAAGAGTTTGAAAATAACTaGGTGTGGAAGACGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKSLFVIPRRKALEKAIQEFENN*VWKTLV Trigger: AACCAACGTCTTCCACACCCAGTTATTTTCAAACTC...TTGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCACACAAGAGACACAGGTaGAAAATTCTCGAGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VYKRVCLLYREGRHWKKPHKRHR*KILEFE Trigger: TTCAAACTCGAGAATTTTCCACCTGTGTCTCTTGTG...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CCA 90 bp | TTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATGAGTTTGAAAATAACTaGGTGTGGAAGACGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTKEFVCYTEKEGTGKSHEFENN*VWKTLV Trigger: AACCAACGTCTTCCACACCCAGTTATTTTCAAACTC...ATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 90 bp | CTCTGCCTCACAGGATGCATAGTAGCAGACCGAGGAGGGGGTGGCTaGGGACGAGTGGTTGTACTGGGGGTGAGAAGGCCAATGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLTGCIVADRGGGG*GRVVVLGVRRPMLA Trigger: TGCCAACATTGGCCTTCTCACCCCCAGTACAACCACTCGTCCCCAGCCACCCCCTCCTCGGTCTGCTACTATGCATCCTGTGAGGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS GCA 90 bp | GAACTCTGTGGTTCTGAGGGCATCCAGATGCTCTGCCTCACAGGATaGATAGTAGCAGACCGAGGAGGGGGTGGCTGGGGACGAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELCGSEGIQMLCLTG*IVADRGGGGWGRVV Trigger: AACCACTCGTCCCCAGCCACCCCCTCCTCGGTCTGCTACTATGCATCCTGTGAGGCAGAGCATCTGGATGCCCTCAGAACCACAGAGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 90 bp | CTGGAAGGTGGAGACCGCTGCTTCCTGACAGGTTTGCCCCTGAGGTaGCCTGGTGTGCCCTTCTTTGCTGCAGAAGCTCTTTCACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEGGDRCFLTGLPLR*PGVPFFAAEALSRS Trigger: TGACCGTGAAAGAGCTTCTGCAGCAAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCAGCGGTCTCCACCTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 90 bp | AGCAGGCATCACAGCTTGTCTCCCTCTTATAGAAATCGCCAGTGGTaGCCACAGGAGGGGCAAAGTCCGCACAGTCCATGCCCGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRHHSLSPSYRNRQW*PQEGQSPHSPCPSR Trigger: CCTACTCGGGCATGGACTGTGCGGACTTTGCCCCTCCTGTGGCCACCACTGGCGATTTCTATAAGAGGGAGACAAGCTGTGATGCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 90 bp | AGGTGGAGACCGCTGCTTCCTGACAGGTTTGCCCCTGAGGTGGCCTaGTGTGCCCTTCTTTGCTGCAGAAGCTCTTTCACGGTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RWRPLLPDRFAPEVA*CALLCCRSSFTVIF Trigger: GAAGATGACCGTGAAAGAGCTTCTGCAGCAAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCAGCGGTCTCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239415.2 |
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| CDS CCA 90 bp | TATAGCAGGCATCACAGCTTGTCTCCCTCTTATAGAAATCGCCAGTaGTGGCCACAGGAGGGGCAAAGTCCGCACAGTCCATGCCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YSRHHSLSPSYRNRQ*WPQEGQSPHSPCPS Trigger: ACTCGGGCATGGACTGTGCGGACTTTGCCCCTCCTGTGGCCACCACTGGCGATTTCTATAAGAGGGAGACAAGCTGTGATGCCTGCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS TCA 90 bp | AGTCCGCACAGTCCATGCCCGAGTAGGAGAAGAACTCTGTGGTTCTaGGGGCATCCAGATGCTCTGCCTCACAGGATGCATAGTAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPHSPCPSRRRTLWF*GHPDALPHRMHSSR Trigger: TCTGCTACTATGCATCCTGTGAGGCAGAGCATCTGGATGCCCTCAGAACCACAGAGTTCTTCTCCTACTCGGGCATGGACTGTGCGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 90 bp | AATCAGGCTCTGGTTGTGGCAGAAAGGGGCCACTTGACAGCTCTCTaGGAAATAGTGGGGAGCAATCTGTGCAGAGTTGAGCAAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NQALVVAERGHLTAL*EIVGSNLCRVEQRL Trigger: GAGCCTTTGCTCAACTCTGCACAGATTGCTCCCCACTATTTCCCAGAGAGCTGTCAAGTGGCCCCTTTCTGCCACAACCAGAGCCTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 90 bp | GGTGAGAAGGCCAATGTTGGCAGAAGTAGCCTTCTTCGGGGAGGCTaGAGTGTAGGGAATCCAGAGAAGGAGGCGAGCTGTAATTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GEKANVGRSSLLRGG*SVGNPEKEASCNFL Trigger: CAGAAAATTACAGCTCGCCTCCTTCTCTGGATTCCCTACACTCCAGCCTCCCCGAAGAAGGCTACTTCTGCCAACATTGGCCTTCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CAA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCGGAATCAGGCTCTGGTaGTGGCAGAAAGGGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DCHKTKFEGIVLTPTLALGIRLW*WQKGAT Trigger: AGTGGCCCCTTTCTGCCACAACCAGAGCCTGATTCC...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS GCA 90 bp | ATAACTGGGTGTGGAAGACGTTGGTTCAGGCTCAAAATACAGTCCTaGGGAAGATGGCATGGTAGTGTCTGGAAGGTGGAGACCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITGCGRRWFRLKIQS*GRWHGSVWKVETAA Trigger: AGCAGCGGTCTCCACCTTCCAGACACTACCATGCCATCTTCCGCAGGACTGTATTTTGAGCCTGAACCAACGTCTTCCACACCCAGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CAA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCGCAATCTGTGCAGAGTaGAGCAAAGGCTCCGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DCHKTKFEGIVLTPTLALAICAE*SKGSGS Trigger: ACTCCCGGAGCCTTTGCTCAACTCTGCACAGATTGC...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CAA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGAAGGCAGCTGAGTaGGTGAGTAACTGCAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: DCHKTKFEGIVLTPTLALRKAAE*VSNCNQ Trigger: TTGATTGCAGTTACTCACCAACTCAGCTGCCTTCCT...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CAA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACTGCTTCCTGACAGGTTaGCCCCTGAGGTGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YKRVCLLYREGRHWKKPYCFLTG*PLRWPG Trigger: ACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCA...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACATGCTTCCTGACAGGTTaGCCCCTGAGGTGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTCFLTG*PLRWPG Trigger: ACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCA...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
||
| CDS-3UTR CAA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATGGAATCAGGCTCTGGTaGTGGCAGAAAGGGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TICGVVCERVEWLKCHQDGIRLW*WQKGAT Trigger: AGTGGCCCCTTTCTGCCACAACCAGAGCCTGATTCC...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGAGGAAGGCAGCTGAGTaGGTGAGTAACTGCAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: GHCVDSYASSQVIENGETRKAAE*VSNCNQ Trigger: TTGATTGCAGTTACTCACCAACTCAGCTGCCTTCCT...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | GACTGTCACAAGACCAAGTTTGAGGGCATTGTGTTGACTCCTACGCTAGCTCTCAGCAGGCATCACAGCTaGTCTCCCTCTTATAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: DCHKTKFEGIVLTPTLALSRHHS*SPSYRN Trigger: ATTTCTATAAGAGGGAGACAAGCTGTGATGCCTGCT...GAGAGCTAGCGTAGGAGTCAACACAATGCCCTCAAACTTGGTCTTGTGACAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | TCAAGATGCAGTAGAGAAAGAGATAGACTCATGACACATTCTATCATGGTTTCTTGCTTCCTGACAGGTTaGCCCCTGAGGTGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRCSRERDRLMTHSIMVSCFLTG*PLRWPG Trigger: ACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCA...AGAAACCATGATAGAATGTGTCATGAGTCTATCTCTTTCTCTACTGCATCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | TACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACGCAATCTGTGCAGAGTaGAGCAAAGGCTCCGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YKRVCLLYREGRHWKKPYAICAE*SKGSGS Trigger: ACTCCCGGAGCCTTTGCTCAACTCTGCACAGATTGC...GTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCAGCAATCTGTGCAGAGTaGAGCAAAGGCTCCGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VYKRVCLLYREGRHWKKPAICAE*SKGSGS Trigger: ACTCCCGGAGCCTTTGCTCAACTCTGCACAGATTGC...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | ACCATATGTGGGGTAGTTTGTGAAAGGGTTGAATGGTTGAAGTGTCATCAAGATGCAGAAAGGGGCCACTaGACAGCTCTCTGGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: TICGVVCERVEWLKCHQDAERGH*TALWEI Trigger: TATTTCCCAGAGAGCTGTCAAGTGGCCCCTTTCTGC...ATCTTGATGACACTTCAACCATTCAACCCTTTCACAAACTACCCCACATATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | TTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATAGGAATCAGGCTCTGGTaGTGGCAGAAAGGGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQKSLFVIPRRKALEKAIGIRLW*WQKGAT Trigger: AGTGGCCCCTTTCTGCCACAACCAGAGCCTGATTCC...TATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | GGGCATTGTGTTGACTCCTACGCTAGCTCTCAGGTGATTGAAAATGGTGAAACGGGAAAATTCTCGAGTTaGAAAATAACTGGGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHCVDSYASSQVIENGETGKFSS*KITGCG Trigger: TCCACACCCAGTTATTTTCAAACTCGAGAATTTTCC...CGTTTCACCATTTTCAATCACCTGAGAGCTAGCGTAGGAGTCAACACAATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | TTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATAGCAGAAAGGGGCCACTaGACAGCTCTCTGGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: LQKSLFVIPRRKALEKAIAERGH*TALWEI Trigger: TATTTCCCAGAGAGCTGTCAAGTGGCCCCTTTCTGC...TATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACATGGGTGTGGAAGACGTaGGTTCAGGCTCAAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTWVWKT*VQAQNT Trigger: TGTATTTTGAGCCTGAACCAACGTCTTCCACACCCA...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCAAGGAAGGCAGCTGAGTaGGTGAGTAACTGCAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: VYKRVCLLYREGRHWKKPRKAAE*VSNCNQ Trigger: TTGATTGCAGTTACTCACCAACTCAGCTGCCTTCCT...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | TTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATGTGAGAAGGCCAATGTaGGCAGAAGTAGCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTKEFVCYTEKEGTGKSHVRRPM*AEVAFF Trigger: GAAGAAGGCTACTTCTGCCAACATTGGCCTTCTCAC...ATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | TCAAGATGCAGTAGAGAAAGAGATAGACTCATGACACATTCTATCATGGTTTCTGTGAGAAGGCCAATGTaGGCAGAAGTAGCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRCSRERDRLMTHSIMVSVRRPM*AEVAFF Trigger: GAAGAAGGCTACTTCTGCCAACATTGGCCTTCTCAC...AGAAACCATGATAGAATGTGTCATGAGTCTATCTCTTTCTCTACTGCATCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | TTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATTGGGTGTGGAAGACGTaGGTTCAGGCTCAAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: FTKEFVCYTEKEGTGKSHWVWKT*VQAQNT Trigger: TGTATTTTGAGCCTGAACCAACGTCTTCCACACCCA...ATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCAAGCAGGCATCACAGCTaGTCTCCCTCTTATAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VYKRVCLLYREGRHWKKPSRHHS*SPSYRN Trigger: ATTTCTATAAGAGGGAGACAAGCTGTGATGCCTGCT...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCATACAGGAAAATTCTCGAGTTaGAAAATAACTGGGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TKEFVCYTEKEGTGKSHTGKFSS*KITGCG Trigger: TCCACACCCAGTTATTTTCAAACTCGAGAATTTTCC...TGTATGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS-3UTR CAA 90 bp | GTTTACAAAAGAGTTTGTTTGTTATACCGAGAAGGAAGGCACTGGAAAAAGCCAGGAAAATTCTCGAGTTaGAAAATAACTGGGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VYKRVCLLYREGRHWKKPGKFSS*KITGCG Trigger: TCCACACCCAGTTATTTTCAAACTCGAGAATTTTCC...TGGCTTTTTCCAGTGCCTTCCTTCTCGGTATAACAAACAAACTCTTTTGTAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | ACAGGATGCATAGTAGCAGACCGAGGAGGGGGTGGCTaGGGACGAGTGGTTGTACTGGGGGTGAGAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGCIVADRGGGG*GRVVVLGVRRP Trigger: TGGCCTTCTCACCCCCAGTACAACCACTCGTCCCCAGCCACCCCCTCCTCGGTCTGCTACTATGCATCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | CCGCTGCTTCCTGACAGGTTTGCCCCTGAGGTGGCCTaGTGTGCCCTTCTTTGCTGCAGAAGCTCTTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: PLLPDRFAPEVA*CALLCCRSSFT Trigger: CGTGAAAGAGCTTCTGCAGCAAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | GGAGACCGCTGCTTCCTGACAGGTTTGCCCCTGAGGTaGCCTGGTGTGCCCTTCTTTGCTGCAGAAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GDRCFLTGLPLR*PGVPFFAAEAL Trigger: AAGAGCTTCTGCAGCAAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCAGCGGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CAA 72 bp | TGTCTGGAAGGTGGAGACCGCTGCTTCCTGACAGGTTaGCCCCTGAGGTGGCCTGGTGTGCCCTTCTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLEGGDRCFLTG*PLRWPGVPFFA Trigger: AGCAAAGAAGGGCACACCAGGCCACCTCAGGGGCAAACCTGTCAGGAAGCAGCGGTCTCCACCTTCCAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CAA 72 bp | GGACGAGTGGTTGTACTGGGGGTGAGAAGGCCAATGTaGGCAGAAGTAGCCTTCTTCGGGGAGGCTGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRVVVLGVRRPM*AEVAFFGEAGV Trigger: CACTCCAGCCTCCCCGAAGAAGGCTACTTCTGCCAACATTGGCCTTCTCACCCCCAGTACAACCACTCGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | GCCAATGTTGGCAGAAGTAGCCTTCTTCGGGGAGGCTaGAGTGTAGGGAATCCAGAGAAGGAGGCGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ANVGRSSLLRGG*SVGNPEKEASC Trigger: ACAGCTCGCCTCCTTCTCTGGATTCCCTACACTCCAGCCTCCCCGAAGAAGGCTACTTCTGCCAACATTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | CATCACAGCTTGTCTCCCTCTTATAGAAATCGCCAGTaGTGGCCACAGGAGGGGCAAAGTCCGCACAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HHSLSPSYRNRQ*WPQEGQSPHSP Trigger: TGGACTGTGCGGACTTTGCCCCTCCTGTGGCCACCACTGGCGATTTCTATAAGAGGGAGACAAGCTGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS TCA 72 bp | AGTCCATGCCCGAGTAGGAGAAGAACTCTGTGGTTCTaGGGGCATCCAGATGCTCTGCCTCACAGGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPCPSRRRTLWF*GHPDALPHRMH Trigger: ATGCATCCTGTGAGGCAGAGCATCTGGATGCCCTCAGAACCACAGAGTTCTTCTCCTACTCGGGCATGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | CGTTGGTTCAGGCTCAAAATACAGTCCTGCGGAAGATaGCATGGTAGTGTCTGGAAGGTGGAGACCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RWFRLKIQSCGR*HGSVWKVETAA Trigger: AGCAGCGGTCTCCACCTTCCAGACACTACCATGCCATCTTCCGCAGGACTGTATTTTGAGCCTGAACCAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | CTGGTTGTGGCAGAAAGGGGCCACTTGACAGCTCTCTaGGAAATAGTGGGGAGCAATCTGTGCAGAGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVVAERGHLTAL*EIVGSNLCRVE Trigger: CTCAACTCTGCACAGATTGCTCCCCACTATTTCCCAGAGAGCTGTCAAGTGGCCCCTTTCTGCCACAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS GCA 72 bp | TTGACAGCTCTCTGGGAAATAGTGGGGAGCAATCTGTaGAGAGTTGAGCAAAGGCTCCGGGAGTGTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LTALWEIVGSNL*RVEQRLRECVC Trigger: ACAGACACACTCCCGGAGCCTTTGCTCAACTCTGCACAGATTGCTCCCCACTATTTCCCAGAGAGCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS GCA 72 bp | TGTGGAAGACGTTGGTTCAGGCTCAAAATACAGTCCTaGGGAAGATGGCATGGTAGTGTCTGGAAGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CGRRWFRLKIQS*GRWHGSVWKVE Trigger: CTCCACCTTCCAGACACTACCATGCCATCTTCCGCAGGACTGTATTTTGAGCCTGAACCAACGTCTTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CAA 90 bp | AAGGAGGCGAGCTGTAATTTTCTGGAGTGTAGGAAGGCAGCTGAGTaGGTGAGTAACTGCAATCAAAGGAGCCAGAGAGACTGGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KEASCNFLECRKAAE*VSNCNQRSQRDWKN Trigger: ATTCTTCCAGTCTCTCTGGCTCCTTTGATTGCAGTTACTCACCAACTCAGCTGCCTTCCTACACTCCAGAAAATTACAGCTCGCCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS TCA 72 bp | GTAATTTTCTGGAGTGTAGGAAGGCAGCTGAGTTGGTaGGTAACTGCAATCAAAGGAGCCAGAGAGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VIFWSVGRQLSW*VTAIKGARETG Trigger: TCCAGTCTCTCTGGCTCCTTTGATTGCAGTTACTCACCAACTCAGCTGCCTTCCTACACTCCAGAAAATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CCA 72 bp | TTCTCGAGTTTGAAAATAACTGGGTGTGGAAGACGTTaGTTCAGGCTCAAAATACAGTCCTGCGGAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: FSSLKITGCGRR*FRLKIQSCGRW Trigger: CCATCTTCCGCAGGACTGTATTTTGAGCCTGAACCAACGTCTTCCACACCCAGTTATTTTCAAACTCGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CAA 72 bp | ATTCTCGAGTTTGAAAATAACTGGGTGTGGAAGACGTaGGTTCAGGCTCAAAATACAGTCCTGCGGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: ILEFENNWVWKT*VQAQNTVLRKM Trigger: CATCTTCCGCAGGACTGTATTTTGAGCCTGAACCAACGTCTTCCACACCCAGTTATTTTCAAACTCGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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| CDS CAA 72 bp | TTCTTCACAAGAGACACAGGTGGAAAATTCTCGAGTTaGAAAATAACTGGGTGTGGAAGACGTTGGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FFTRDTGGKFSS*KITGCGRRWFR Trigger: CCTGAACCAACGTCTTCCACACCCAGTTATTTTCAAACTCGAGAATTTTCCACCTGTGTCTCTTGTGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114427.4 ENSMUST00000215038.3 ENSMUST00000239415.2 |
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