Pregenerated sensors for COL9A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027570Ensembl transcript IDs: ENSMUST00000103059.2, ENSMUST00000132527.9
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAATCTTaGAGATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGC | + |
Preference number: 1 (lower is better) Translates to: PSLRPVSEVLGCHKS*RWDSDSAANRCSWG Trigger: GCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR CCA 90 bp | CTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATaGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCA | + |
Preference number: 1 (lower is better) Translates to: LRPVSEVLGCHKSWR*DSDSAANRCSWGQA Trigger: TGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAGGCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR GCA 90 bp | ATTTCTGTCCATAGCCACACCGCTCATCCCTGCTGCCTGCTGGAGTaGTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACTGAA | + |
Preference number: 1 (lower is better) Translates to: ISVHSHTAHPCCLLE*SRISVGNMEPFPTE Trigger: TTCAGTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGATGAGCGGTGTGGCTATGGACAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR GCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTaGCATAAATCTTGGAGATGGGACAGTGACAGTGCTGCCAATAGA | + |
Preference number: 1 (lower is better) Translates to: GLKSPSLRPVSEVLG*HKSWRWDSDSAANR Trigger: TCTATTGGCAGCACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR-3UTR GCA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACACCGCTCATCCCTGCTaGCTGCTGGAGTGCTCTCGT | + |
Preference number: 2 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDTAHPC*LLECSR Trigger: ACGAGAGCACTCCAGCAGGCAGCAGGGATGAGCGGT...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR-3UTR CCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACAATCCCTGCTGCCTGCTaGAGTGCTCTCGTATTTCAG | + |
Preference number: 2 (lower is better) Translates to: GHEGPTVASHCPFLSIATIPAAC*SALVFQ Trigger: CTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGAT...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR CAA 90 bp | ATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATaGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGCTGCC | + |
Preference number: 2 (lower is better) Translates to: MLGLKSPSLRPVSEV*GCHKSWRWDSDSAA Trigger: GGCAGCACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACCCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR-3UTR CCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAAGCCAATAGATGTTCTTaGGGCCAAGCAGCAGGCCAT | + |
Preference number: 2 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKANRCS*GQAAGH Trigger: ATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGC...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR-3UTR TCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCCAAGCAGCAGGCCATaGAGGACCAACTGTAGCCAG | + |
Preference number: 2 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVPSSRP*RTNCSQ Trigger: CTGGCTACAGTTGGTCCTTCATGGCCTGCTGCTTGG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR-3UTR CCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGATCCCTGCTGCCTGCTaGAGTGCTCTCGTATTTCAG | + |
Preference number: 2 (lower is better) Translates to: QYIALMPTFPYCEAVLYVIPAAC*SALVFQ Trigger: CTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGAT...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR-3UTR CCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGGCCAATAGATGTTCTTaGGGCCAAGCAGCAGGCCAT | + |
Preference number: 2 (lower is better) Translates to: QYIALMPTFPYCEAVLYVANRCS*GQAAGH Trigger: ATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGC...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR GCA 72 bp | CATAGCCACACCGCTCATCCCTGCTGCCTGCTGGAGTaGTCTCGTATTTCAGTAGGAAATATGGAGCCATTT | + |
Preference number: 3 (lower is better) Translates to: HSHTAHPCCLLE*SRISVGNMEPF Trigger: AAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGATGAGCGGTGTGGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR GCA 72 bp | TCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTaGCATAAATCTTGGAGATGGGACAGTGACAGTGCT | + |
Preference number: 3 (lower is better) Translates to: SPSLRPVSEVLG*HKSWRWDSDSA Trigger: AGCACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR CCA 72 bp | AGGCCTGTGTCTGAGGTATTGGGCTGCCATAAATCTTaGAGATGGGACAGTGACAGTGCTGCCAATAGATGT | + |
Preference number: 3 (lower is better) Translates to: RPVSEVLGCHKS*RWDSDSAANRC Trigger: ACATCTATTGGCAGCACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR TCA 72 bp | TGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTaGGTCGCTTTATTTATTTTAACAGATGGTGCAGTG | + |
Preference number: 3 (lower is better) Translates to: CNKLYVWNKGSQ*VALFILTDGAV Trigger: CACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCGGCCCTGGATGCCTTTaGGGCCCAGTTCCCCTCGGC | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAGPGCL*GPVPLG Trigger: GCCGAGGGGAACTGGGCCCCAAAGGCATCCAGGGCC...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCCACGGAGCCCCTGTaGCCAGCCTCACCACGCTCC | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATPTEPL*PASPRS Trigger: GGAGCGTGGTGAGGCTGGTCACAGGGGCTCCGTGGG...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCCTCGCCTTTGGACCCTaGTCGTCCAGGGAGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLILAFGP*SSREPR Trigger: CCGGGGCTCCCTGGACGAGCAGGGTCCAAAGGCGAG...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCCTTTCTGCGCGGAGGTaGCCGTCAGGAGCTGCCCCA | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQALSARR*PSGAAP Trigger: TGGGGCAGCTCCTGACGGCCACCTCCGCGCAGAAAG...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCGAGGCCACTCACTCCTaGCTCTCCAGGAGGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAEATHS*LSRRSR Trigger: CCTGGACCTCCTGGAGAGGCAGGAGTGAGTGGCCTC...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCCATCCTTGCCTGGCATaGCTGGTTCTCCGCCTGGCC | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAHPCLA*LVLRLA Trigger: GGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATG...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCTACACCAGGCAGTCCTaGCAGTCCTGCCTCTCCCGG | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAYTRQS*QSCLSR Trigger: CCGGGAGAGGCAGGACTGCCAGGACTGCCTGGTGTA...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCGGCCTGGCGGGCAGATaGCGGGACACTGCAGATCAG | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLIGLAGR*RDTADQ Trigger: CTGATCTGCAGTGTCCCGCCATCTGCCCGCCAGGCC...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCGCCTGGTTCTCCGCCTaGCCCAGCCATTCCAGGGAT | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAAWFSA*PSHSRD Trigger: ATCCCTGGAATGGCTGGGCCAGGCGGAGAACCAGGC...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCGCCTGTGGCACCTCCTaGACCCCGGTCACCCACATC | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLIACGTS*TPVTHI Trigger: GATGTGGGTGACCGGGGTCCAGGAGGTGCCACAGGC...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCAGCTCCTTGGCAGGCTaGAGTGTCGCAGATCCCTGG | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQASSLAG*SVADPW Trigger: CCAGGGATCTGCGACACTTCAGCCTGCCAAGGAGCT...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCCCTGGACTCCACTGGTaGCATTGGGGCCCTGGATGC | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLIPGLHW*HWGPGC Trigger: GCATCCAGGGCCCCAATGGCACCAGTGGAGTCCAGG...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCAGGCCCATCCAGCCCTaGACCTGTTGCTCCCTTGTC | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQARPIQP*TCCSLV Trigger: GACAAGGGAGCAACAGGTGCAGGGCTGGATGGGCCT...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACTTGCCTGGCATGCCTaGTTCTCCGCCTGGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATLAWHA*FSAWPS Trigger: GCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAG...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACGTGCCATTGGGGCCCTaGATGCCTTTGGGGCCCAGT | + |
Preference number: 4 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDVPLGP*MPLGPS Trigger: ACTGGGCCCCAAAGGCATCCAGGGCCCCAATGGCAC...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACACCTTGGAGGCCCAGTaGACCTGGGGGACCAGGTAC | + |
Preference number: 4 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDTLEAQ*TWGTRY Trigger: GTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGT...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCCTTCCCGGTGATGCCTaGGACACCCTGCACACCTTG | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQALPGDA*DTLHTL Trigger: CAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAG...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACAGTGGCCAATAGAGCCTaGAGGGCCTGGAGGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATVANRA*RAWRAW Trigger: CCAGGCCCTCCAGGCCCTCCAGGCTCTATTGGCCAC...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACTTCCCTGGCTTCCCTaGGGTCCCTTTGGGTCCTGG | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATLPWLP*GPFGSW Trigger: CCAGGACCCAAAGGGACCTCAGGGAAGCCAGGGAAG...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACCCCCGCATAGCTCCCTaGTGCGCTGTTCACTGGCTT | + |
Preference number: 4 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDPRIAP*CAVHWL Trigger: AAGCCAGTGAACAGCGCATCAGGGAGCTATGCGGGG...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCAGGCCAGGCTCACCATaGGCACCATCTCGACCATCT | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQARPGSP*APSRPS Trigger: AGATGGTCGAGATGGTGCTCATGGTGAGCCTGGCCT...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACAATCCCTGGGGTACCCTaGGCACCAGCAGCTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATIPGVP*APAAPG Trigger: TCCTGGAGCTGCTGGTGCTCAGGGTACCCCAGGGAT...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACAGCTCCTTGGCAGGCTaGAGTGTCGCAGATCCCTGG | + |
Preference number: 4 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDSSLAG*SVADPW Trigger: CCAGGGATCTGCGACACTTCAGCCTGCCAAGGAGCT...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTCGGGGTCCCACTTTCTaGGCGGAGGTGGCCGTCAGG | + |
Preference number: 4 (lower is better) Translates to: ITPSLPDAGFKVSIPKACRGPTF*AEVAVR Trigger: CCTGACGGCCACCTCCGCGCAGAAAGTGGGACCCCG...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACATTGGGGCCCTGGATaGCTTTGGGGCCCAGTTCCC | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATHWGPG*LWGPVP Trigger: GGGAACTGGGCCCCAAAGGCATCCAGGGCCCCAATG...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCCAGCCCTGCACCTGTTaGTCCCTTGTCCCCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLIQPCTC*SLVPSV Trigger: GACAGAGGGGACAAGGGAGCAACAGGTGCAGGGCTG...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CATCCCTGCTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCACTTGCCTGGCATGCCTaGTTCTCCGCCTGGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: HPCCLLECSRISVGNMEPLAWHA*FSAWPS Trigger: GCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAG...TGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCCTCCACTGGTGCCATTaGGGCCCTGGATGCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLILHWCH*GPGCLW Trigger: CCAAAGGCATCCAGGGCCCCAATGGCACCAGTGGAG...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACACCCTGGACTCCACTaGTGCCATTGGGGCCCTGGA | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATHPGLH*CHWGPG Trigger: TCCAGGGCCCCAATGGCACCAGTGGAGTCCAGGGTG...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAAGTGGCCGTCAGGAGCTaGCCCAGCAGCAGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKVAVRS*PSSSRA Trigger: AGCCCTGCTGCTGCTGGGGCAGCTCCTGACGGCCAC...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
||
CDS-3UTR GCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGACCCACTTTCCCAGGTaGTCCTGGGGTCCCAGGGGG | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVTHFPR*SWGPRG Trigger: CCCCCTGGGACCCCAGGAGCACCTGGGAAAGTGGGT...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCCTCCTTGGCCACCATTaGGACCAGCCTCTCCCTTCT | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLILLGHH*DQPLPS Trigger: AGAAGGGAGAGGCTGGTCGCAATGGTGGCCAAGGAG...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCGGCCAGGGTCTCCTGTaGTGCCTTTTTGTCCCTGAA | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAGQGLL*CLFVPE Trigger: TTCAGGGACAAAAAGGCAGCACAGGAGACCCTGGCC...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTGGCCTGGCGGGCAGATaGCGGGACACTGCAGATCAG | + |
Preference number: 4 (lower is better) Translates to: ITPSLPDAGFKVSIPKACGLAGR*RDTADQ Trigger: CTGATCTGCAGTGTCCCGCCATCTGCCCGCCAGGCC...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACGGCCCTGGATGCCTTTaGGGCCCAGTTCCCCTCGGC | + |
Preference number: 4 (lower is better) Translates to: LPAGVLSYFSRKYGAISYGPGCL*GPVPLG Trigger: GCCGAGGGGAACTGGGCCCCAAAGGCATCCAGGGCC...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGGAGGCCCAGTGGACCTaGGGGACCAGGTACACCCTG | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVEAQWT*GTRYTL Trigger: CAGGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTC...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTGTGGCCAATAGAGCCTaGAGGGCCTGGAGGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: ITPSLPDAGFKVSIPKACVANRA*RAWRAW Trigger: CCAGGCCCTCCAGGCCCTCCAGGCTCTATTGGCCAC...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACATCCCCTCTGTCACCCTaGCTCCCTCTTGGTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATSPLSP*LPLGPG Trigger: TCCTGGACCAAGAGGGAGCCAGGGTGACAGAGGGGA...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACAAGGCCAGGCTCACCATaGGCACCATCTCGACCATCT | + |
Preference number: 4 (lower is better) Translates to: GHEGPTVASHCPFLSIATRPGSP*APSRPS Trigger: AGATGGTCGAGATGGTGCTCATGGTGAGCCTGGCCT...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACCAGTCCTGGCAGTCCTaGCTCTCCCGGCTTCCCTGG | + |
Preference number: 4 (lower is better) Translates to: LPAGVLSYFSRKYGAISYQSWQS*LSRLPW Trigger: CCAGGGAAGCCGGGAGAGGCAGGACTGCCAGGACTG...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTGAGGCCACTCACTCCTaGCTCTCCAGGAGGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: ITPSLPDAGFKVSIPKACEATHS*LSRRSR Trigger: CCTGGACCTCCTGGAGAGGCAGGAGTGAGTGGCCTC...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCCATCTTTGCCATCCTTaGCTGGCATGCCTGGTTCTC | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAHLCHP*LACLVL Trigger: GAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATG...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACGAGGCCCAGTGGACCTaGGGGACCAGGTACACCCTG | + |
Preference number: 4 (lower is better) Translates to: LPAGVLSYFSRKYGAISYEAQWT*GTRYTL Trigger: CAGGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTC...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGACACCCTGCACACCTTaGAGGCCCAGTGGACCTGGG | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVTPCTP*RPSGPG Trigger: CCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGT...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CATCCCTGCTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCAAGTGTCGCAGATCCCTaGGGTACCCTGAGCACCAGC | + |
Preference number: 4 (lower is better) Translates to: HPCCLLECSRISVGNMEPSVADP*GTLSTS Trigger: GCTGGTGCTCAGGGTACCCCAGGGATCTGCGACACT...TGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAACTTCCCTGGCTTCCCTaGGGTCCCTTTGGGTCCTGG | + |
Preference number: 4 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKLPWLP*GPFGSW Trigger: CCAGGACCCAAAGGGACCTCAGGGAAGCCAGGGAAG...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAAATCCCTGGGGTACCCTaGGCACCAGCAGCTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKIPGVP*APAAPG Trigger: TCCTGGAGCTGCTGGTGCTCAGGGTACCCCAGGGAT...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCCAGCTTCTCCATCAATaGCATCCTTGCCGGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAQLLHQ*HPCRVF Trigger: GAAAACCCGGCAAGGATGGCATTGATGGAGAAGCTG...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGATGCCTGGGACACCCTaGACACCTTGGAGGCCCAGT | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVMPGTP*TPWRPS Trigger: ACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCAT...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACCAGCTGGACCAGGCCTaGCGATGGAGCCTGGTGCTA | + |
Preference number: 4 (lower is better) Translates to: LPAGVLSYFSRKYGAISYQLDQA*RWSLVL Trigger: TAGCACCAGGCTCCATCGGCAGGCCTGGTCCAGCTG...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAACTCCAGGGGCACCTTTaGGTCCTGCGGGTCCATCTC | + |
Preference number: 4 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKLQGHL*VLRVHL Trigger: GAGATGGACCCGCAGGACCCAAAGGTGCCCCTGGAG...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGCTCCTAGTTCCCCAGTaGGACCACGGTATCCAGGGG | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVLLVPQ*DHGIQG Trigger: CCCCTGGATACCGTGGTCCCACTGGGGAACTAGGAG...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGTCCCCTCTGTCACCCTaGCTCCCTCTTGGTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVSPLSP*LPLGPG Trigger: TCCTGGACCAAGAGGGAGCCAGGGTGACAGAGGGGA...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR TCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTCCCACGGAGCCCCTGTaGCCAGCCTCACCACGCTCC | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLPTEPL*PASPRS Trigger: GGAGCGTGGTGAGGCTGGTCACAGGGGCTCCGTGGG...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCCAGCTTCTCCATCAATaGCATCCTTGCCGGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLIQLLHQ*HPCRVF Trigger: GAAAACCCGGCAAGGATGGCATTGATGGAGAAGCTG...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCTCGCCTTTGGACCCTaGTCGTCCAGGGAGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVLAFGP*SSREPR Trigger: CCGGGGCTCCCTGGACGAGCAGGGTCCAAAGGCGAG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACCCTGAAAGCCACGGATaGCAGGAGCACCAGGAGGAC | + |
Preference number: 4 (lower is better) Translates to: LPAGVLSYFSRKYGAISYPESHG*QEHQED Trigger: GTCCTCCTGGTGCTCCTGGCATCCGTGGCTTTCAGG...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCGCCAACTGTGCAATTTaGTCACTGATCATACCCCCG | + |
Preference number: 4 (lower is better) Translates to: GPTVASHCPFLSIATPLIANCAI*SLIIPP Trigger: CGGGGGTATGATCAGTGAGCAAATTGCACAGTTGGC...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGGAACCCCGGCATTCCTaGGGGTCCCGGAGGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVEPRHS*GSRRAW Trigger: CCAGGCCCTCCGGGACCCCCAGGAATGCCGGGGTTC...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTGAACCCCGGCATTCCTaGGGGTCCCGGAGGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLEPRHS*GSRRAW Trigger: CCAGGCCCTCCGGGACCCCCAGGAATGCCGGGGTTC...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACGGGCCTTTCTCTCCTTaGCCACCATTGCGACCAGCC | + |
Preference number: 4 (lower is better) Translates to: LPAGVLSYFSRKYGAISYGPFSP*PPLRPA Trigger: GGCTGGTCGCAATGGTGGCCAAGGAGAGAAAGGCCC...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGCTCACCACGCTCCCCTaGAACACCAACATCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVLTTLP*NTNISR Trigger: CCTGGAGATGTTGGTGTTCCAGGGGAGCGTGGTGAG...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTGAACCTGCAATGCCCTaGTCTCCCTTAGGGCCTGTG | + |
Preference number: 4 (lower is better) Translates to: ITPSLPDAGFKVSIPKACEPAMP*SPLGPV Trigger: CACAGGCCCTAAGGGAGACCAGGGCATTGCAGGTTC...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCCCCGAGCGCCAGGGTaGCCAATAGAGCCTGGAGGG | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVPRAPG*PIEPGG Trigger: CCCTCCAGGCTCTATTGGCCACCCTGGCGCTCGGGG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTGTGGCCGTCAGGAGCTaGCCCAGCAGCAGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLVAVRS*PSSSRA Trigger: AGCCCTGCTGCTGCTGGGGCAGCTCCTGACGGCCAC...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCAGTCCTGGCAGTCCTaGCTCTCCCGGCTTCCCTGG | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVQSWQS*LSRLPW Trigger: CCAGGGAAGCCGGGAGAGGCAGGACTGCCAGGACTG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCCTGTAGCCCCACGGTaGCTGGGATTCCAGGAGGCC | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVPVAPR*LGFQEA Trigger: GGCCTCCTGGAATCCCAGGCACCGTGGGGCTACAGG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAACCGGCACACCATCTTTaGCATCCTTGCCTGGCATGC | + |
Preference number: 4 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKPAHHL*HPCLAC Trigger: GCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGG...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAACTCGCCTTTGTCCCCTaGAAGACCATCGGAACCTGC | + |
Preference number: 4 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKLAFVP*KTIGTC Trigger: GCAGGTTCCGATGGTCTTCCAGGGGACAAAGGCGAG...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGCCTGTAGCCCCACGGTaGCTGGGATTCCAGGAGGCC | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVPVAPR*LGFQEA Trigger: GGCCTCCTGGAATCCCAGGCACCGTGGGGCTACAGG...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGCAGGGTCTCCTGTGCTaGCTTTTTGTCCCTGAAAGC | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVQGLLC*LFVPES Trigger: GCTTTCAGGGACAAAAAGGCAGCACAGGAGACCCTG...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGAAGACCATCGGAACCTaGAATGCCCTGGTCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: LCLRYWAAINLGDGTVTVKTIGT*NALVSL Trigger: AAGGGAGACCAGGGCATTGCAGGTTCCGATGGTCTT...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCCTGGACTCCACTGGTaGCATTGGGGCCCTGGATGC | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVPGLHW*HWGPGC Trigger: GCATCCAGGGCCCCAATGGCACCAGTGGAGTCCAGG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTCCCCGAGCGCCAGGGTaGCCAATAGAGCCTGGAGGG | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSPRAPG*PIEPGG Trigger: CCCTCCAGGCTCTATTGGCCACCCTGGCGCTCGGGG...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACCAGGGTCTCCTGTGCTaGCTTTTTGTCCCTGAAAGC | + |
Preference number: 4 (lower is better) Translates to: LPAGVLSYFSRKYGAISYQGLLC*LFVPES Trigger: GCTTTCAGGGACAAAAAGGCAGCACAGGAGACCCTG...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTCAGCTGGACCAGGCCTaGCGATGGAGCCTGGTGCTA | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLQLDQA*RWSLVL Trigger: TAGCACCAGGCTCCATCGGCAGGCCTGGTCCAGCTG...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTGCCACGGAACCCTTCTaGTCCCCTTTCACCCCTGTC | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVATEPF*SPFTPV Trigger: GACAGGGGTGAAAGGGGACCAGAAGGGTTCCGTGGC...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTACCAGGAGGACCTTGTaGGCCAAGAGCTCCCACGGA | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVTRRTL*AKSSHG Trigger: TCCGTGGGAGCTCTTGGCCCACAAGGTCCTCCTGGT...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTGTGCCATTGGGGCCCTaGATGCCTTTGGGGCCCAGT | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLVPLGP*MPLGPS Trigger: ACTGGGCCCCAAAGGCATCCAGGGCCCCAATGGCAC...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCTCCACTGGTGCCATTaGGGCCCTGGATGCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVLHWCH*GPGCLW Trigger: CCAAAGGCATCCAGGGCCCCAATGGCACCAGTGGAG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTCACCCTGGACTCCACTaGTGCCATTGGGGCCCTGGA | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLHPGLH*CHWGPG Trigger: TCCAGGGCCCCAATGGCACCAGTGGAGTCCAGGGTG...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGACACCCTGCACACCTTaGAGGCCCAGTGGACCTGGG | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVTPCTP*RPSGPG Trigger: CCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGT...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTAGTGTCGCAGATCCCTaGGGTACCCTGAGCACCAGC | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVSVADP*GTLSTS Trigger: GCTGGTGCTCAGGGTACCCCAGGGATCTGCGACACT...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCTCCTTGGCCACCATTaGGACCAGCCTCTCCCTTCT | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVLLGHH*DQPLPS Trigger: AGAAGGGAGAGGCTGGTCGCAATGGTGGCCAAGGAG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTCATTGGGGCCCTGGATaGCTTTGGGGCCCAGTTCCC | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSHWGPG*LWGPVP Trigger: GGGAACTGGGCCCCAAAGGCATCCAGGGCCCCAATG...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTCCCTGAGGTCCCTTTaGGTCCTGGAAGGCCAGGCA | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVSLRSL*VLEGQA Trigger: TGCCTGGCCTTCCAGGACCCAAAGGGACCTCAGGGA...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTCTCCAGGGGCACCTTTaGGTCCTGCGGGTCCATCTC | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSLQGHL*VLRVHL Trigger: GAGATGGACCCGCAGGACCCAAAGGTGCCCCTGGAG...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTGCCACGGAACCCTTCTaGTCCCCTTTCACCCCTGTC | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLATEPF*SPFTPV Trigger: GACAGGGGTGAAAGGGGACCAGAAGGGTTCCGTGGC...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTCTCCCTTCTCGCCTTTaGACCCTGCTCGTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLLPSRL*TLLVQG Trigger: TCCCTGGACGAGCAGGGTCCAAAGGCGAGAAGGGAG...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGCTCCCTTCTCGCCTTTaGACCCTGCTCGTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVLPSRL*TLLVQG Trigger: TCCCTGGACGAGCAGGGTCCAAAGGCGAGAAGGGAG...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGATCTCCAGGGATACCTaGCTCTCCAGAGGGGCCAGC | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVISRDT*LSRGAS Trigger: GCTGGCCCCTCTGGAGAGCCAGGTATCCCTGGAGAT...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTATCTCCAGGGATACCTaGCTCTCCAGAGGGGCCAGC | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLISRDT*LSRGAS Trigger: GCTGGCCCCTCTGGAGAGCCAGGTATCCCTGGAGAT...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCTCACCACGCTCCCCTaGAACACCAACATCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVLTTLP*NTNISR Trigger: CCTGGAGATGTTGGTGTTCCAGGGGAGCGTGGTGAG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCTCGCCTTTGTCCCCTaGAAGACCATCGGAACCTGC | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVLAFVP*KTIGTC Trigger: GCAGGTTCCGATGGTCTTCCAGGGGACAAAGGCGAG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTACCTTGGAGGCCCAGTaGACCTGGGGGACCAGGTAC | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSTLEAQ*TWGTRY Trigger: GTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGT...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTCTTCCCGGTGATGCCTaGGACACCCTGCACACCTTG | + |
Preference number: 4 (lower is better) Translates to: FSQYIALMPTFPYCEAVLLPGDA*DTLHTL Trigger: CAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAG...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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3UTR CAA 72 bp | TTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATaGGGCTGCCATAAATCTTGGAGATGGGACAGTGAC | + |
Preference number: 4 (lower is better) Translates to: LKSPSLRPVSEV*GCHKSWRWDSD Trigger: GTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGGTTCACTGGCTTCCTTaGCCGGAACTCCAGGCTTCC | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVVHWLP*PELQAS Trigger: GGAAGCCTGGAGTTCCGGGCAAGGAAGCCAGTGAAC...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTCAGCCCTGCACCTGTTaGTCCCTTGTCCCCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSQPCTC*SLVPSV Trigger: GACAGAGGGGACAAGGGAGCAACAGGTGCAGGGCTG...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTAGGCCCATCCAGCCCTaGACCTGTTGCTCCCTTGTC | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSRPIQP*TCCSLV Trigger: GACAAGGGAGCAACAGGTGCAGGGCTGGATGGGCCT...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTACTTTCTGCGCGGAGGTaGCCGTCAGGAGCTGCCCCA | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLLSARR*PSGAAP Trigger: TGGGGCAGCTCCTGACGGCCACCTCCGCGCAGAAAG...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTGGGCCTTTCTCTCCTTaGCCACCATTGCGACCAGCC | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSGPFSP*PPLRPA Trigger: GGCTGGTCGCAATGGTGGCCAAGGAGAGAAAGGCCC...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTAGCCTGTGGCACCTCCTaGACCCCGGTCACCCACATC | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLACGTS*TPVTHI Trigger: GATGTGGGTGACCGGGGTCCAGGAGGTGCCACAGGC...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TCATGGAATTGTACAAAACTCTTAGATAACACCATCCCTCCCAGATGCTGGGTTCCTAACACAGCTCCTTaGCAGGCTGAAGTGTCGCAG | + |
Preference number: 4 (lower is better) Translates to: SWNCTKLLDNTIPPRCWVPNTAP*QAEVSQ Trigger: CTGCGACACTTCAGCCTGCCAAGGAGCTGTGTTAGG...AACCCAGCATCTGGGAGGGATGGTGTTATCTAAGAGTTTTGTACAATTCCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTACATCCTTGCCTGGCATaGCTGGTTCTCCGCCTGGCC | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLHPCLA*LVLRLA Trigger: GGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATG...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTCCGGCACACCATCTTTaGCATCCTTGCCTGGCATGC | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSPAHHL*HPCLAC Trigger: GCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGG...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTAGCCTGGTTCTCCGCCTaGCCCAGCCATTCCAGGGAT | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLAWFSA*PSHSRD Trigger: ATCCCTGGAATGGCTGGGCCAGGCGGAGAACCAGGC...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTGAACCTGCAATGCCCTaGTCTCCCTTAGGGCCTGTG | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSEPAMP*SPLGPV Trigger: CACAGGCCCTAAGGGAGACCAGGGCATTGCAGGTTC...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGCATCTTTGCCATCCTTaGCTGGCATGCCTGGTTCTC | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVHLCHP*LACLVL Trigger: GAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATG...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGAAGACCATCGGAACCTaGAATGCCCTGGTCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVKTIGT*NALVSL Trigger: AAGGGAGACCAGGGCATTGCAGGTTCCGATGGTCTT...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTAATGCCTGGGACACCCTaGACACCTTGGAGGCCCAGT | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLMPGTP*TPWRPS Trigger: ACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCAT...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGGGGCTTCCTCAGGTGTaGAGCCAACTGTGCAATTTG | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVGLPQV*SQLCNL Trigger: CAAATTGCACAGTTGGCTGCACACCTGAGGAAGCCC...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATCCCTGAGGTCCCTTTaGGTCCTGGAAGGCCAGGCA | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLSLRSL*VLEGQA Trigger: TGCCTGGCCTTCCAGGACCCAAAGGGACCTCAGGGA...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTAACCAGGAGGACCTTGTaGGCCAAGAGCTCCCACGGA | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLTRRTL*AKSSHG Trigger: TCCGTGGGAGCTCTTGGCCCACAAGGTCCTCCTGGT...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTACTCCTAGTTCCCCAGTaGGACCACGGTATCCAGGGG | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLLLVPQ*DHGIQG Trigger: CCCCTGGATACCGTGGTCCCACTGGGGAACTAGGAG...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTCCTAACACAGCTCCTTaGCAGGCTGAAGTGTCGCAG | + |
Preference number: 4 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSPNTAP*QAEVSQ Trigger: CTGCGACACTTCAGCCTGCCAAGGAGCTGTGTTAGG...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTAGTTCACTGGCTTCCTTaGCCGGAACTCCAGGCTTCC | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLVHWLP*PELQAS Trigger: GGAAGCCTGGAGTTCCGGGCAAGGAAGCCAGTGAAC...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGGCCAACTGTGCAATTTaGTCACTGATCATACCCCCG | + |
Preference number: 4 (lower is better) Translates to: QYIALMPTFPYCEAVLYVANCAI*SLIIPP Trigger: CGGGGGTATGATCAGTGAGCAAATTGCACAGTTGGC...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTCCAGGGATTCCTTTaGGACCAGGCCTGCCCAGGT | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLFQGFL*DQACPG Trigger: ACCTGGGCAGGCCTGGTCCCAAAGGAATCCCTGGAA...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR GCA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTAGGGCTTCCTCAGGTGTaGAGCCAACTGTGCAATTTG | + |
Preference number: 4 (lower is better) Translates to: CVINCMFGTKVPSESLYLGLPQV*SQLCNL Trigger: CAAATTGCACAGTTGGCTGCACACCTGAGGAAGCCC...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 90 bp | TCCTTGCCCGGAACTCCAGGCTTCCCGGTGATGCCTGGGACACCCTaGACACCTTGGAGGCCCAGTGGACCTGGGGGACCAGGTACACCC | + |
Preference number: 5 (lower is better) Translates to: SLPGTPGFPVMPGTP*TPWRPSGPGGPGTP Trigger: GGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAGCCTGGAGTTCCGGGCAAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 90 bp | GGTGATGCCTGGGACACCCTGCACACCTTGGAGGCCCAGTGGACCTaGGGGACCAGGTACACCCTGGACTCCACTGGTGCCATTGGGGCC | + |
Preference number: 5 (lower is better) Translates to: GDAWDTLHTLEAQWT*GTRYTLDSTGAIGA Trigger: GGCCCCAATGGCACCAGTGGAGTCCAGGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 90 bp | GGGACCAGGCCTGCCCAGGTCACCCTTAGGGCCACGGAACCCTTCTaGTCCCCTTTCACCCCTGTCACCCACTTTCCCAGGTGCTCCTGG | + |
Preference number: 5 (lower is better) Translates to: GTRPAQVTLRATEPF*SPFTPVTHFPRCSW Trigger: CCAGGAGCACCTGGGAAAGTGGGTGACAGGGGTGAAAGGGGACCAGAAGGGTTCCGTGGCCCTAAGGGTGACCTGGGCAGGCCTGGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 90 bp | GGAACTCCAGGCTTCCCGGTGATGCCTGGGACACCCTGCACACCTTaGAGGCCCAGTGGACCTGGGGGACCAGGTACACCCTGGACTCCA | + |
Preference number: 5 (lower is better) Translates to: GTPGFPVMPGTPCTP*RPSGPGGPGTPWTP Trigger: TGGAGTCCAGGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAGCCTGGAGTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 90 bp | CTTCCCGGTGATGCCTGGGACACCCTGCACACCTTGGAGGCCCAGTaGACCTGGGGGACCAGGTACACCCTGGACTCCACTGGTGCCATT | + |
Preference number: 5 (lower is better) Translates to: LPGDAWDTLHTLEAQ*TWGTRYTLDSTGAI Trigger: AATGGCACCAGTGGAGTCCAGGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 90 bp | CACCATCAAGTCCCGGCACACCATCTTTGCCATCCTTGCCTGGCATaGCTGGTTCTCCGCCTGGCCCAGCCATTCCAGGGATTCCTTTGG | + |
Preference number: 5 (lower is better) Translates to: HHQVPAHHLCHPCLA*LVLRLAQPFQGFLW Trigger: CCAAAGGAATCCCTGGAATGGCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGGACTTGATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 90 bp | CTTCTCACCATCAAGTCCCGGCACACCATCTTTGCCATCCTTGCCTaGCATGCCTGGTTCTCCGCCTGGCCCAGCCATTCCAGGGATTCC | + |
Preference number: 5 (lower is better) Translates to: LLTIKSRHTIFAILA*HAWFSAWPSHSRDS Trigger: GGAATCCCTGGAATGGCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGGACTTGATGGTGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCTACACCTTGAGGCCCTaGGTAGCCCTGGTCCCCAGC | + |
Preference number: 5 (lower is better) Translates to: DGTVTVLPIDVLGAKQQAYTLRP*VALVPS Trigger: GCTGGGGACCAGGGCTACCAAGGGCCTCAAGGTGTA...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CATCCCTGCTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCAGGTCCAGGGAGGCCTTaGCCCCCAAGTCCTGGTGGC | + |
Preference number: 5 (lower is better) Translates to: HPCCLLECSRISVGNMEPGPGRP*PPSPGG Trigger: GCCACCAGGACTTGGGGGCAAAGGCCTCCCTGGACC...TGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCTCTCCTTGGCCACCATaGCGACCAGCCTCTCCCTTC | + |
Preference number: 5 (lower is better) Translates to: DGTVTVLPIDVLGAKQQASPWPP*RPASPF Trigger: GAAGGGAGAGGCTGGTCGCAATGGTGGCCAAGGAGA...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACGGGGCCTTTCTCTCCTaGGCCACCATTGCGACCAGC | + |
Preference number: 5 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDGAFLS*ATIATS Trigger: GCTGGTCGCAATGGTGGCCAAGGAGAGAAAGGCCCC...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCGGACCCAGCTCGCCTTaGTCCCCTGGAAGACCATCG | + |
Preference number: 5 (lower is better) Translates to: GPTVASHCPFLSIATPLIGPSSP*SPGRPS Trigger: CGATGGTCTTCCAGGGGACAAAGGCGAGCTGGGTCC...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCACTCCACTGGTGCCATaGGGGCCCTGGATGCCTTTG | + |
Preference number: 5 (lower is better) Translates to: DGTVTVLPIDVLGAKQQATPLVP*GPWMPL Trigger: CAAAGGCATCCAGGGCCCCAATGGCACCAGTGGAGT...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACCCAGCCCTGCACCTGTaGCTCCCTTGTCCCCTCTGT | + |
Preference number: 5 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDPALHL*LPCPLC Trigger: ACAGAGGGGACAAGGGAGCAACAGGTGCAGGGCTGG...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCTCTCCTTGGCCACCATaGCGACCAGCCTCTCCCTTC | + |
Preference number: 5 (lower is better) Translates to: GPTVASHCPFLSIATPLISPWPP*RPASPF Trigger: GAAGGGAGAGGCTGGTCGCAATGGTGGCCAAGGAGA...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACATCTCCCTTCTCGCCTTaGGACCCTGCTCGTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: GHEGPTVASHCPFLSIATSPFSP*DPARPG Trigger: CCCTGGACGAGCAGGGTCCAAAGGCGAGAAGGGAGA...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGCCATGAAGGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACATACACCTTGAGGCCCTaGGTAGCCCTGGTCCCCAGC | + |
Preference number: 5 (lower is better) Translates to: GHEGPTVASHCPFLSIATYTLRP*VALVPS Trigger: GCTGGGGACCAGGGCTACCAAGGGCCTCAAGGTGTA...TGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCCTTCATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACGATGCCAGGTACACCTaGAGGCCCTTGGTAGCCCTG | + |
Preference number: 5 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDDARYT*RPLVAL Trigger: CAGGGCTACCAAGGGCCTCAAGGTGTACCTGGCATC...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CATCCCTGCTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTCCCTGAGGTCCCTTaGGGTCCTGGAAGGCCAGGC | + |
Preference number: 5 (lower is better) Translates to: HPCCLLECSRISVGNMEPFPEVP*GPGRPG Trigger: GCCTGGCCTTCCAGGACCCAAAGGGACCTCAGGGAA...TGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CATCCCTGCTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCACCAGCCCTGCACCTGTaGCTCCCTTGTCCCCTCTGT | + |
Preference number: 5 (lower is better) Translates to: HPCCLLECSRISVGNMEPPALHL*LPCPLC Trigger: ACAGAGGGGACAAGGGAGCAACAGGTGCAGGGCTGG...TGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAGCAGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTTTCCCTGAGGTCCCTTaGGGTCCTGGAAGGCCAGGC | + |
Preference number: 5 (lower is better) Translates to: ITPSLPDAGFKVSIPKACFPEVP*GPGRPG Trigger: GCCTGGCCTTCCAGGACCCAAAGGGACCTCAGGGAA...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGTCTCCAGGGGCACCTTaGGGTCCTGCGGGTCCATCT | + |
Preference number: 5 (lower is better) Translates to: LCLRYWAAINLGDGTVTVSPGAP*GPAGPS Trigger: AGATGGACCCGCAGGACCCAAAGGTGCCCCTGGAGA...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CTGTGTCTGAGGTATTGGGCTGCCATAAATCTTGGAGATGGGACAGTGACAGTGGGGGCCTTTCTCTCCTaGGCCACCATTGCGACCAGC | + |
Preference number: 5 (lower is better) Translates to: LCLRYWAAINLGDGTVTVGAFLS*ATIATS Trigger: GCTGGTCGCAATGGTGGCCAAGGAGAGAAAGGCCCC...CACTGTCACTGTCCCATCTCCAAGATTTATGGCAGCCCAATACCTCAGACACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GATGGGACAGTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCTCCTGTGCTGCCTTTTaGTCCCTGAAAGCCACGGAT | + |
Preference number: 5 (lower is better) Translates to: DGTVTVLPIDVLGAKQQASCAAF*SLKATD Trigger: ATCCGTGGCTTTCAGGGACAAAAAGGCAGCACAGGA...GGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCACTGTCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACTCTCCAGGGGCACCTTaGGGTCCTGCGGGTCCATCT | + |
Preference number: 5 (lower is better) Translates to: LPAGVLSYFSRKYGAISYSPGAP*GPAGPS Trigger: AGATGGACCCGCAGGACCCAAAGGTGCCCCTGGAGA...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGACCAACTGTAGCCAGCCACTGTCCATTTCTGTCCATAGCCACACCGCTCATCTCCTGTGCTGCCTTTTaGTCCCTGAAAGCCACGGAT | + |
Preference number: 5 (lower is better) Translates to: GPTVASHCPFLSIATPLISCAAF*SLKATD Trigger: ATCCGTGGCTTTCAGGGACAAAAAGGCAGCACAGGA...GATGAGCGGTGTGGCTATGGACAGAAATGGACAGTGGCTGGCTACAGTTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAAGCACCTGTTGCTCCCTaGTCCCCTCTGTCACCCTGG | + |
Preference number: 5 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKAPVAP*SPLSPW Trigger: CCAGGGTGACAGAGGGGACAAGGGAGCAACAGGTGC...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAACCCGGCACACCATCTTaGCCATCCTTGCCTGGCATG | + |
Preference number: 5 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKPGTPS*PSLPGM Trigger: CATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGG...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTGGGCCCTGGATGCCTTaGGGGCCCAGTTCCCCTCGG | + |
Preference number: 5 (lower is better) Translates to: FSQYIALMPTFPYCEAVLGPWMP*GPSSPR Trigger: CCGAGGGGAACTGGGCCCCAAAGGCATCCAGGGCCC...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTTGTTCACTGGCTTCCTaGCCCGGAACTCCAGGCTTC | + |
Preference number: 5 (lower is better) Translates to: ITPSLPDAGFKVSIPKACCSLAS*PGTPGF Trigger: GAAGCCTGGAGTTCCGGGCAAGGAAGCCAGTGAACA...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GTGACAGTGCTGCCAATAGATGTTCTTGGGGCCAAGCAGCAGGCCATGAAGGACTTTGCCAACTTCTCCTaGTTCCCCTTTGTAGCCAGT | + |
Preference number: 5 (lower is better) Translates to: VTVLPIDVLGAKQQAMKDFANFS*FPFVAS Trigger: ACTGGCTACAAAGGGGAACAAGGAGAAGTTGGCAAA...GTCCTTCATGGCCTGCTGCTTGGCCCCAAGAACATCTATTGGCAGCACTGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTGGGCCCTGGATGCCTTaGGGGCCCAGTTCCCCTCGG | + |
Preference number: 5 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSGPWMP*GPSSPR Trigger: CCGAGGGGAACTGGGCCCCAAAGGCATCCAGGGCCC...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAATGTTCACTGGCTTCCTaGCCCGGAACTCCAGGCTTC | + |
Preference number: 5 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKCSLAS*PGTPGF Trigger: GAAGCCTGGAGTTCCGGGCAAGGAAGCCAGTGAACA...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAACCATCTTTGCCATCCTaGCCTGGCATGCCTGGTTCT | + |
Preference number: 5 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKPSLPS*PGMPGS Trigger: AGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGG...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | GGTTTAAAGTCTCCATCCCTAAGGCCTGTGTCTGAGGTATTGGGCTGCCATAAAGCCAGACTCTCCTTTTaGTCCAACGGGGCCATTAGG | + |
Preference number: 5 (lower is better) Translates to: GLKSPSLRPVSEVLGCHKARLSF*SNGAIR Trigger: CCTAATGGCCCCGTTGGACAAAAAGGAGAGTCTGGC...TTTATGGCAGCCCAATACCTCAGACACAGGCCTTAGGGATGGAGACTTTAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | ATAACACCATCCCTCCCAGATGCTGGGTTTAAAGTCTCCATCCCTAAGGCCTGTCCCTTCTCACCATCTTaGCCAACTTCTCCTTGTTCC | + |
Preference number: 5 (lower is better) Translates to: ITPSLPDAGFKVSIPKACPFSPS*PTSPCS Trigger: GGAACAAGGAGAAGTTGGCAAAGATGGTGAGAAGGG...ACAGGCCTTAGGGATGGAGACTTTAAACCCAGCATCTGGGAGGGATGGTGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGGGACCCAGCTCGCCTTaGTCCCCTGGAAGACCATCG | + |
Preference number: 5 (lower is better) Translates to: QYIALMPTFPYCEAVLYVGPSSP*SPGRPS Trigger: CGATGGTCTTCCAGGGGACAAAGGCGAGCTGGGTCC...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTGCACCTGTTGCTCCCTaGTCCCCTCTGTCACCCTGG | + |
Preference number: 5 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSAPVAP*SPLSPW Trigger: CCAGGGTGACAGAGGGGACAAGGGAGCAACAGGTGC...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CTGCCTGCTGGAGTGCTCTCGTATTTCAGTAGGAAATATGGAGCCATTTCCTACTTTGCCAACTTCTCCTaGTTCCCCTTTGTAGCCAGT | + |
Preference number: 5 (lower is better) Translates to: LPAGVLSYFSRKYGAISYFANFS*FPFVAS Trigger: ACTGGCTACAAAGGGGAACAAGGAGAAGTTGGCAAA...GTAGGAAATGGCTCCATATTTCCTACTGAAATACGAGAGCACTCCAGCAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTCCCGGCACACCATCTTaGCCATCCTTGCCTGGCATG | + |
Preference number: 5 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSPGTPS*PSLPGM Trigger: CATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGG...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTACTCCACTGGTGCCATaGGGGCCCTGGATGCCTTTG | + |
Preference number: 5 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSTPLVP*GPWMPL Trigger: CAAAGGCATCCAGGGCCCCAATGGCACCAGTGGAGT...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTCACCCTGGCTCCCTCTaGGTCCAGGATCTCCTAGTT | + |
Preference number: 5 (lower is better) Translates to: FSQYIALMPTFPYCEAVLHPGSL*VQDLLV Trigger: AACTAGGAGATCCTGGACCAAGAGGGAGCCAGGGTG...AAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | CAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGCACCCTGGCTCCCTCTaGGTCCAGGATCTCCTAGTT | + |
Preference number: 5 (lower is better) Translates to: QYIALMPTFPYCEAVLYVHPGSL*VQDLLV Trigger: AACTAGGAGATCCTGGACCAAGAGGGAGCCAGGGTG...CACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTGATGCCAGGTACACCTaGAGGCCCTTGGTAGCCCTG | + |
Preference number: 5 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSDARYT*RPLVAL Trigger: CAGGGCTACCAAGGGCCTCAAGGTGTACCTGGCATC...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATCTCCCTTCTCGCCTTaGGACCCTGCTCGTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: CVINCMFGTKVPSESLYLSPFSP*DPARPG Trigger: CCCTGGACGAGCAGGGTCCAAAGGCGAGAAGGGAGA...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTATTTTAACAGATGGTGCAGTGCCAGACTCTCCTTTTaGTCCAACGGGGCCATTAGG | + |
Preference number: 5 (lower is better) Translates to: LEQRFPVSRFIYFNRWCSARLSF*SNGAIR Trigger: CCTAATGGCCCCGTTGGACAAAAAGGAGAGTCTGGC...ACTGCACCATCTGTTAAAATAAATAAAGCGACTCACTGGGAACCTTTGTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTACCATCTTTGCCATCCTaGCCTGGCATGCCTGGTTCT | + |
Preference number: 5 (lower is better) Translates to: CVINCMFGTKVPSESLYLPSLPS*PGMPGS Trigger: AGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGG...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS-3UTR CAA 90 bp | TGTGTAATAAACTGTATGTTTGGAACAAAGGTTCCCAGTGAGTCGCTTTATTTACCCTTCTCACCATCTTaGCCAACTTCTCCTTGTTCC | + |
Preference number: 5 (lower is better) Translates to: CVINCMFGTKVPSESLYLPFSPS*PTSPCS Trigger: GGAACAAGGAGAAGTTGGCAAAGATGGTGAGAAGGG...TAAATAAAGCGACTCACTGGGAACCTTTGTTCCAAACATACAGTTTATTACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 72 bp | GGTCCCACTTTCTGCGCGGAGGTGGCCGTCAGGAGCTaGCCCAGCAGCAGCAGGGCTAGGGCAGGCGCTCCG | + |
Preference number: 6 (lower is better) Translates to: GPTFCAEVAVRS*PSSSRARAGAP Trigger: CGGAGCGCCTGCCCTAGCCCTGCTGCTGCTGGGGCAGCTCCTGACGGCCACCTCCGCGCAGAAAGTGGGACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 72 bp | GGTCCCGGAGGGCCTGGCGGGCAGATGGCGGGACACTaGAGATCAGTAGCACCTTCAGGGAGGACTCCAGGG | + |
Preference number: 6 (lower is better) Translates to: GPGGPGGQMAGH*RSVAPSGRTPG Trigger: CCCTGGAGTCCTCCCTGAAGGTGCTACTGATCTGCAGTGTCCCGCCATCTGCCCGCCAGGCCCTCCGGGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | CTTGAACCCCGGCATTCCTGGGGGTCCCGGAGGGCCTaGCGGGCAGATGGCGGGACACTGCAGATCAGTAGC | + |
Preference number: 6 (lower is better) Translates to: LEPRHSWGSRRA*RADGGTLQISS Trigger: GCTACTGATCTGCAGTGTCCCGCCATCTGCCCGCCAGGCCCTCCGGGACCCCCAGGAATGCCGGGGTTCAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | GGCTTCCCGGTGATGCCTGGGACACCCTGCACACCTTaGAGGCCCAGTGGACCTGGGGGACCAGGTACACCC | + |
Preference number: 6 (lower is better) Translates to: GFPVMPGTPCTP*RPSGPGGPGTP Trigger: GGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 90 bp | CGGAACTCCAGGCTTCCCGGTGATGCCTGGGACACCCTGCACACCTaGGAGGCCCAGTGGACCTGGGGGACCAGGTACACCCTGGACTCC | + |
Preference number: 6 (lower is better) Translates to: RNSRLPGDAWDTLHT*EAQWTWGTRYTLDS Trigger: GGAGTCCAGGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAGCCTGGAGTTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 72 bp | GGAACTCCAGGCTTCCCGGTGATGCCTGGGACACCCTaGACACCTTGGAGGCCCAGTGGACCTGGGGGACCA | + |
Preference number: 6 (lower is better) Translates to: GTPGFPVMPGTP*TPWRPSGPGGP Trigger: TGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAGCCTGGAGTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | TGGAGGCCCAGTGGACCTGGGGGACCAGGTACACCCTaGACTCCACTGGTGCCATTGGGGCCCTGGATGCCT | + |
Preference number: 6 (lower is better) Translates to: WRPSGPGGPGTP*TPLVPLGPWMP Trigger: AGGCATCCAGGGCCCCAATGGCACCAGTGGAGTCCAGGGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 72 bp | AGGCTTCCCGGTGATGCCTGGGACACCCTGCACACCTaGGAGGCCCAGTGGACCTGGGGGACCAGGTACACC | + |
Preference number: 6 (lower is better) Translates to: RLPGDAWDTLHT*EAQWTWGTRYT Trigger: GGTGTACCTGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | ACGCTCCCCTGGAACACCAACATCTCCAGGGATACCTaGCTCTCCAGAGGGGCCAGCCTCACCCAGCTCGCC | + |
Preference number: 6 (lower is better) Translates to: TLPWNTNISRDT*LSRGASLTQLA Trigger: GGCGAGCTGGGTGAGGCTGGCCCCTCTGGAGAGCCAGGTATCCCTGGAGATGTTGGTGTTCCAGGGGAGCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | TTCCTTGCCCGGAACTCCAGGCTTCCCGGTGATGCCTaGGACACCCTGCACACCTTGGAGGCCCAGTGGACC | + |
Preference number: 6 (lower is better) Translates to: FLARNSRLPGDA*DTLHTLEAQWT Trigger: GGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAAGCCTGGAGTTCCGGGCAAGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 72 bp | CTGAAAGCCACGGATGCCAGGAGCACCAGGAGGACCTaGTGGGCCAAGAGCTCCCACGGAGCCCCTGTGACC | + |
Preference number: 6 (lower is better) Translates to: LKATDARSTRRT*WAKSSHGAPVT Trigger: GGTCACAGGGGCTCCGTGGGAGCTCTTGGCCCACAAGGTCCTCCTGGTGCTCCTGGCATCCGTGGCTTTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 72 bp | GACCTGGAGGGCCAGCTTCTCCATCAATGCCATCCTTaGCGGGTTTTCCAGGAGGCCCTTGGGGACCAGGGG | + |
Preference number: 6 (lower is better) Translates to: DLEGQLLHQCHP*RVFQEALGDQG Trigger: CCCCTGGTCCCCAAGGGCCTCCTGGAAAACCCGGCAAGGATGGCATTGATGGAGAAGCTGGCCCTCCAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 72 bp | GTCCCGGCACACCATCTTTGCCATCCTTGCCTGGCATaGCTGGTTCTCCGCCTGGCCCAGCCATTCCAGGGA | + |
Preference number: 6 (lower is better) Translates to: VPAHHLCHPCLA*LVLRLAQPFQG Trigger: TCCCTGGAATGGCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 72 bp | GTAGGCCTTGGGGGCCCGGAAGGCCAGGGTCTCCTGTaGTGCCTTTTTGTCCCTGAAAGCCACGGATGCCAG | + |
Preference number: 6 (lower is better) Translates to: VGLGGPEGQGLL*CLFVPESHGCQ Trigger: CTGGCATCCGTGGCTTTCAGGGACAAAAAGGCAGCACAGGAGACCCTGGCCTTCCGGGCCCCCAAGGCCTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | CACGGAGCCCCTGTGACCAGCCTCACCACGCTCCCCTaGAACACCAACATCTCCAGGGATACCTGGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: HGAPVTSLTTLP*NTNISRDTWLS Trigger: GGAGAGCCAGGTATCCCTGGAGATGTTGGTGTTCCAGGGGAGCGTGGTGAGGCTGGTCACAGGGGCTCCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 90 bp | TTTTTGTCCCTGAAAGCCACGGATGCCAGGAGCACCAGGAGGACCTaGTGGGCCAAGAGCTCCCACGGAGCCCCTGTGACCAGCCTCACC | + |
Preference number: 6 (lower is better) Translates to: FLSLKATDARSTRRT*WAKSSHGAPVTSLT Trigger: GGTGAGGCTGGTCACAGGGGCTCCGTGGGAGCTCTTGGCCCACAAGGTCCTCCTGGTGCTCCTGGCATCCGTGGCTTTCAGGGACAAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS GCA 72 bp | CACCATCAAGTCCCGGCACACCATCTTTGCCATCCTTaGCTGGCATGCCTGGTTCTCCGCCTGGCCCAGCCA | + |
Preference number: 6 (lower is better) Translates to: HHQVPAHHLCHP*LACLVLRLAQP Trigger: TGGCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGGACTTGATGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 72 bp | AGACCTGGAGGGCCAGCTTCTCCATCAATGCCATCCTaGCCGGGTTTTCCAGGAGGCCCTTGGGGACCAGGG | + |
Preference number: 6 (lower is better) Translates to: RPGGPASPSMPS*PGFPGGPWGPG Trigger: CCCTGGTCCCCAAGGGCCTCCTGGAAAACCCGGCAAGGATGGCATTGATGGAGAAGCTGGCCCTCCAGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 72 bp | TCACCATCAAGTCCCGGCACACCATCTTTGCCATCCTaGCCTGGCATGCCTGGTTCTCCGCCTGGCCCAGCC | + |
Preference number: 6 (lower is better) Translates to: SPSSPGTPSLPS*PGMPGSPPGPA Trigger: GGCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGGACTTGATGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 72 bp | ACCATCTTTGCTGATGCCAGGTACACCTTGAGGCCCTaGGTAGCCCTGGTCCCCAGCAGGCCCATCCAGCCC | + |
Preference number: 6 (lower is better) Translates to: TIFADARYTLRP*VALVPSRPIQP Trigger: GGGCTGGATGGGCCTGCTGGGGACCAGGGCTACCAAGGGCCTCAAGGTGTACCTGGCATCAGCAAAGATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | ATCAAGTCCCGGCACACCATCTTTGCCATCCTTGCCTaGCATGCCTGGTTCTCCGCCTGGCCCAGCCATTCC | + |
Preference number: 6 (lower is better) Translates to: IKSRHTIFAILA*HAWFSAWPSHS Trigger: GGAATGGCTGGGCCAGGCGGAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGGACTTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CCA 72 bp | AACGGGGCCATTAGGACCCAGCTCGCCTTTGTCCCCTaGAAGACCATCGGAACCTGCAATGCCCTGGTCTCC | + |
Preference number: 6 (lower is better) Translates to: NGAIRTQLAFVP*KTIGTCNALVS Trigger: GGAGACCAGGGCATTGCAGGTTCCGATGGTCTTCCAGGGGACAAAGGCGAGCTGGGTCCTAATGGCCCCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 72 bp | TCTCCCTTCTCACCATCAAGTCCCGGCACACCATCTTaGCCATCCTTGCCTGGCATGCCTGGTTCTCCGCCT | + |
Preference number: 6 (lower is better) Translates to: SPFSPSSPGTPS*PSLPGMPGSPP Trigger: AGGCGGAGAACCAGGCATGCCAGGCAAGGATGGCAAAGATGGTGTGCCGGGACTTGATGGTGAGAAGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS TCA 72 bp | CAGGCTCACCATGAGCACCATCTCGACCATCTTTGCTaGTGCCAGGTACACCTTGAGGCCCTTGGTAGCCCT | + |
Preference number: 6 (lower is better) Translates to: QAHHEHHLDHLC*CQVHLEALGSP Trigger: AGGGCTACCAAGGGCCTCAAGGTGTACCTGGCATCAGCAAAGATGGTCGAGATGGTGCTCATGGTGAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |
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CDS CAA 72 bp | AGGACTACCCTTCTCACCATCTTTGCCAACTTCTCCTaGTTCCCCTTTGTAGCCAGTAGGCCCCTTGAACCC | + |
Preference number: 6 (lower is better) Translates to: RTTLLTIFANFS*FPFVASRPLEP Trigger: GGGTTCAAGGGGCCTACTGGCTACAAAGGGGAACAAGGAGAAGTTGGCAAAGATGGTGAGAAGGGTAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103059.2 ENSMUST00000132527.9 |