Pregenerated sensors for COL9A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028626Ensembl transcript IDs: ENSMUST00000030372.6
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAGAGAAGCTACCCTCTTCCCTTGGGAGGGGTGGCTCTCCAATACTaGGCTCTGTTGGCCTCACCTTTACTCCCGTGCTCTCCCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: KRSYPLPLGGVALQY*ALLASPLLPCSPSP Trigger: GGGGGAGGGAGAGCACGGGAGTAAAGGTGAGGCCAACAGAGCCAAGTATTGGAGAGCCACCCCTCCCAAGGGAAGAGGGTAGCTTCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR TCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATGCTGAAAGGCATGGGTaGGGGGTAGTTGGTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: GWETGNSRAGLRTATSRYAERHG*GVVGTP Trigger: TGGAGTACCAACTACCCCTCACCCATGCCTTTCAGC...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCCTAGCCTCCTGGGTCTaGAGTACATGTCCACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ETGNSRAGLRTATSRYSPLASWV*STCPPR Trigger: TCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAG...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCGCTACCCTCTTCCCTTaGGAGGGGTGGCTCTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAATLFP*EGWLSN Trigger: ATTGGAGAGCCACCCCTCCCAAGGGAAGAGGGTAGC...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR TCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAGGGATGGCCCAGTGCTaGAAGGCATGGGTGAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PTEELLFTQRPEWCGQKRGMAQC*KAWVRG Trigger: ACCCCTCACCCATGCCTTTCAGCACTGGGCCATCCC...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATAGAAATCTAGCCTCCTaGGTCTGGAGTACATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GWETGNSRAGLRTATSRYRNLAS*VWSTCP Trigger: TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCT...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAACCCCTGCCCCGAGGGTaGGATGGCCCAGTGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKPLPRG*DGPVLK Trigger: TTTCAGCACTGGGCCATCCCACCCTCGGGGCAGGGG...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAGCCCCGAGGGTGGGATaGCCCAGTGCTGAAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKAPRVG*PSAERH Trigger: ATGCCTTTCAGCACTGGGCCATCCCACCCTCGGGGC...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGATGGATGTTTAAATACTaGGATGGGAGACAGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: PTEELLFTQRPEWCGQKRWMFKY*DGRQAI Trigger: TATTGCCTGTCTCCCATCCCAGTATTTAAACATCCA...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR TCA 72 bp | CCGAGGGTGGGATGGCCCAGTGCTGAAAGGCATGGGTaGGGGGTAGTTGGTACTCCAGGAAGAGAAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: PRVGWPSAERHG*GVVGTPGREAT Trigger: GGTAGCTTCTCTTCCTGGAGTACCAACTACCCCTCACCCATGCCTTTCAGCACTGGGCCATCCCACCCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR CCA 72 bp | ACCCTCTTCCCTTGGGAGGGGTGGCTCTCCAATACTTaGCTCTGTTGGCCTCACCTTTACTCCCGTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: TLFPWEGWLSNT*LCWPHLYSRAL Trigger: GAGAGCACGGGAGTAAAGGTGAGGCCAACAGAGCCAAGTATTGGAGAGCCACCCCTCCCAAGGGAAGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR CCA 72 bp | GTTGGTACTCCAGGAAGAGAAGCTACCCTCTTCCCTTaGGAGGGGTGGCTCTCCAATACTTGGCTCTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: VGTPGREATLFP*EGWLSNTWLCW Trigger: CCAACAGAGCCAAGTATTGGAGAGCCACCCCTCCCAAGGGAAGAGGGTAGCTTCTCTTCCTGGAGTACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CAA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCCAATACTTGGCTCTGTaGGCCTCACCTTTACTCCCG | + |
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Preference number: 3 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAQYLAL*ASPLLP Trigger: CGGGAGTAAAGGTGAGGCCAACAGAGCCAAGTATTG...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CAA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAAGCTACCCTCTTCCCTaGGGAGGGGTGGCTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: PTEELLFTQRPEWCGQKRSYPLP*GGVALQ Trigger: TTGGAGAGCCACCCCTCCCAAGGGAAGAGGGTAGCT...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR CCA 72 bp | TTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTaGAGTACATGTCCACCCAGAAGTGACCCTAGACAC | + |
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Preference number: 3 (lower is better) Translates to: FQKILRNLASWV*STCPPRSDPRH Trigger: GTGTCTAGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR-3UTR CAA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAGTGGCTCTCCAATACTaGGCTCTGTTGGCCTCACCT | + |
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Preference number: 3 (lower is better) Translates to: PTEELLFTQRPEWCGQKRVALQY*ALLASP Trigger: AGGTGAGGCCAACAGAGCCAAGTATTGGAGAGCCAC...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATGGAGAACGAACAGGCTaGGGGGCGCGGGCACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYGERTG*GARARR Trigger: CCGCCGTGCCCGCGCCCCGCAGCCTGTTCGTTCTCC...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCGCCTGGCTGTCCCACTaGCCCCCTCTCGCCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPAWLSH*PPLALV Trigger: GACCAGGGCGAGAGGGGGCCAGTGGGACAGCCAGGC...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCCCGGCCAGGAAGACCTaGGATCCCTGGGGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPPARKT*DPWGPR Trigger: CCTGGGCCCCCAGGGATCCCAGGTCTTCCTGGCCGG...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCCCTGGGAGCCCAGGCTaGCCCTTGACTCCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPPGSPG*PLTPGV Trigger: GACCCCTGGAGTCAAGGGCCAGCCTGGGCTCCCAGG...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCCCCTGGTGGACCTCTaGTCTGAGCCAGGGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPPLVDL*SEPGRA Trigger: GGCTCGCCCTGGCTCAGATCAGAGGTCCACCAGGGG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCATGCCCGGGTAGCCCCTaGTGCCTTGGGGGCCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPCPGSP*CLGGPV Trigger: CACCGGGCCCCCAAGGCATCAGGGGCTACCCGGGCA...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCTCTCCCTTGGGTCCTaGCATGCCCGGGTAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYLSLGS*HARVAP Trigger: AGGGGCTACCCGGGCATGGCAGGACCCAAGGGAGAG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCCCACTGCTCCCACGATaGCAGGAATGCCTCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPPLLPR*QECLGG Trigger: GCCCCCGAGGCATTCCTGGCATCGTGGGAGCAGTGG...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTGGTGGACCTCTGATCTaGGCCAGGGCGAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPGGPLI*ARASHS Trigger: GCTGTGGCTCGCCCTGGCTCAGATCAGAGGTCCACC...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCACTCCCGGCAAGCCCTaGTGGCCTGGTTCACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPTPGKP*WPGSPL Trigger: CAAGGGTGAACCAGGCCAGCAGGGCTTGCCGGGAGT...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCACCCACATCTCCCTTaGGACCTGGCTTCCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYHPHLP*DLASPG Trigger: GCCAGGGGAAGCCAGGTCCCAAGGGAGATGTGGGTG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTACCGGCTCGGCCTGGTaGCCCTCTTGGGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPTGSAW*PSWAFF Trigger: GAAGAAGGCCCAAGAGGGCCACCAGGCCGAGCCGGT...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTGGGCCCCTGTTTGCCTaGATATCCAGGGGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPGPLFA*ISRGPR Trigger: CCTGGGCCCCCTGGATATCCAGGCAAACAGGGGCCC...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATACCGTCGATGCCATCTaGACCAGGCACTCCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYTVDAI*TRHSWW Trigger: CCACCAGGAGTGCCTGGTTCAGATGGCATCGACGGT...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCTCGGGGGCCGGGATaGCCATTGGGCCCCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPPRGPG*PLGPCL Trigger: CAAACAGGGGCCCAATGGGCATCCCGGCCCCCGAGG...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCTGGTCCCTCTGGTCCTaGATCCCCCTTGGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAWSLWS*IPLGAW Trigger: CCAGGCCCCAAGGGGGATCCAGGACCAGAGGGACCA...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCACACCCGCTAAGCCCTaGTGGCCTGGGCTTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLATPAKP*WPGLPG Trigger: GCCAGGAAGCCCAGGCCACCAGGGCTTAGCGGGTGT...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCAAGCCCTGCTGGCCTaGTTCACCCTTGTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYQALLA*FTLVSR Trigger: CCTGGAGACAAGGGTGAACCAGGCCAGCAGGGCTTG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCTCGTCCTTGAGGGCCTaGCTGTCCCACTGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLASSLRA*LSHWPP Trigger: AGGGGGCCAGTGGGACAGCCAGGCCCTCAAGGACGA...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTGGCCCTGCTCTCCTTTaGGGCCCTGTCGTCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPGPALL*GPVVLE Trigger: CTCAAGGACGACAGGGCCCCAAAGGAGAGCAGGGCC...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCAAAGACCTGGGATCCCTaGGGGCCCAGGCATCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPKTWDP*GPRHPG Trigger: CCCGGGATGCCTGGGCCCCCAGGGATCCCAGGTCTT...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCCCAGTGTTGCCAATCTaGCCCACTGCTCCCACGATG | + |
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Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPPVLPI*PTAPTM Trigger: CATCGTGGGAGCAGTGGGTCAGATTGGCAACACTGG...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCCATCCTTGCCATTaGTTGCCTGGCCAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPPHPCH*LPGQAG Trigger: GCCGGCCTGGCCAGGCAATCAATGGCAAGGATGGGG...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCCCGGTGGTCCAGGGATaGCTTGCTCTCCAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAPVVQG*LALQRH Trigger: GTGCCTCTGGAGAGCAAGGCATCCCTGGACCACCGG...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCTGGGGTCCCATCCTTaGCATCAATGCCTGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYLGSHP*HQCLVD Trigger: GTCCACCAGGCATTGATGGCAAGGATGGGACCCCAG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCCCTTCATGCCAGGAATaGCTGGGGTCCCATCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPPSCQE*LGSHPC Trigger: GCAAGGATGGGACCCCAGGCATTCCTGGCATGAAGG...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTATTCCTGGAGGGCCCTaGTCTCCTTTGGGGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPIPGGP*SPLGPC Trigger: ACAGGGCCCCAAAGGAGAGCAGGGCCCTCCAGGAAT...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTACCACATCCACGATGTaGTGGTCACTGGCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPTTSTM*WSLAAR Trigger: CCGAGCCGCCAGTGACCAGCACATCGTGGATGTGGT...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCGCCCACCATCCCTGCTaGACCCAGGGCTTCTCGCTT | + |
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Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAAHHPC*TQGFSL Trigger: AAGCGAGAAGCCCTGGGTGCAGCAGGGATGGTGGGC...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGATGGCCCTGGTGGCCCTaGAGGACCCGGCTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PTEELLFTQRPEWCGQKRWPWWP*RTRLPW Trigger: CCAGGGGAGCCGGGTCCTCCAGGGCCACCAGGGCCA...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCCCATCTGGACCATCTaGGCCAGGTTTGCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPPIWTI*ARFARL Trigger: GAGCCTGGCAAACCTGGCCCAGATGGTCCAGATGGG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTGCCCAGCAGCCCCGATaGAGCCCACCATGCCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPAQQPR*SPPCLY Trigger: ATAAAGGCATGGTGGGCTCCATCGGGGCTGCTGGGC...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCGGGCCCGGTCTTCCCTaGGGAACCCTTATCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETGNSRAGLRTATSRYSPGPGLP*GTLISF Trigger: AAAGGAGATAAGGGTTCCCCAGGGAAGACCGGGCCC...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCACATCCACGATGTGCTaGTCACTGGCGGCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLATSTMC*SLAARP Trigger: GGGCCGAGCCGCCAGTGACCAGCACATCGTGGATGT...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCCAGGCATCCCGGGATaGCCACGACCCATTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPPGIPG*PRPISP Trigger: AGGAGAAATGGGTCGTGGCCATCCCGGGATGCCTGG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| 3UTR CAA 72 bp | TACCCTCTTCCCTTGGGAGGGGTGGCTCTCCAATACTaGGCTCTGTTGGCCTCACCTTTACTCCCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPLPLGGVALQY*ALLASPLLPCS Trigger: AGAGCACGGGAGTAAAGGTGAGGCCAACAGAGCCAAGTATTGGAGAGCCACCCCTCCCAAGGGAAGAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCCCTTTTGTTCCAGGCTaGCCCGGCACACCCGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAPFVPG*PGTPAK Trigger: CTTAGCGGGTGTGCCGGGTCAGCCTGGAACAAAAGG...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCAATCTCCCTTGGGACCTaGCTTCCCCTGGCGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPISLGT*LPLATR Trigger: CCTGGTCGCCAGGGGAAGCCAGGTCCCAAGGGAGAT...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCATGCCAGGAATGCCTaGGGTCCCATCCTTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPHARNA*GPILAI Trigger: GATGGCAAGGATGGGACCCCAGGCATTCCTGGCATG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTTTGCCATTGATTGCCTaGCCAGGCCGGCCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPLPLIA*PGRPGR Trigger: TCTTCCTGGCCGGCCTGGCCAGGCAATCAATGGCAA...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCACCCTTCTGTCCCATaGTGCCCTGTGGACCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYHPSVP*CPVDQF Trigger: AAATTGGTCCACAGGGCATCATGGGACAGAAGGGTG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAGGGCCCTGTCGTCCTTaGGGGCCTGGCTGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PTEELLFTQRPEWCGQKRGPCRP*GPGCPT Trigger: AGTGGGACAGCCAGGCCCTCAAGGACGACAGGGCCC...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACTGCACTGCCCTTCATaGCAGGAATGCCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPLHCPS*QECLGS Trigger: GGACCCCAGGCATTCCTGGCATGAAGGGCAGTGCAG...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCCACTTGTCCTGCACTaGCCTTCATGCCAGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPPLVLH*PSCQEC Trigger: GCATTCCTGGCATGAAGGGCAGTGCAGGACAAGTGG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTTGCCAGGCTCTCCTTTaGATCCCGGAGGACCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPCQALL*IPEDQL Trigger: AAGTTGGTCCTCCGGGATCCAAAGGAGAGCCTGGCA...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTGCCAGGTTTCCCATCTaGACCATCTGGGCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLASWVWSTCPPRSDPARFPI*TIWARF Trigger: AAACCTGGCCCAGATGGTCCAGATGGGAAACCTGGC...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCAATCCCCCTTGGGGCCTaGGGTTCCAATCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPIPLGA*GSNLTR Trigger: CCTGGTGAGATTGGAACCCCAGGCCCCAAGGGGGAT...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCACTCCTTGCAAACCCTaGGGACCCTTCACACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLATPCKP*GPFTPA Trigger: AGCTGGTGTGAAGGGTCCTCAGGGTTTGCAAGGAGT...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCCCAGAATCCCCCGTTTaGCTGGATGACCCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAPESPV*LDDPSL Trigger: GAGTGAAGGGTCATCCAGGCAAACGGGGGATTCTGG...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCGCCAATCTGACCCACTaGTCCCACGATGCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAANLTH*SHDARN Trigger: ATTCCTGGCATCGTGGGAGCAGTGGGTCAGATTGGC...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAACCCGCTAAGCCCTGGTaGCCTGGGCTTCCTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKPAKPW*PGLPGR Trigger: ACGGCCAGGAAGCCCAGGCCACCAGGGCTTAGCGGG...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCAGGGCTTCTCGCTTaGCACTCACAGCTACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPPGLLA*HSQLPQ Trigger: CTGAGGTAGCTGTGAGTGCCAAGCGAGAAGCCCTGG...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAGGACCTGGCTTCCCCTaGCGACCAGGATCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTEELLFTQRPEWCGQKRGPGFP*RPGSPR Trigger: TCTGGGTGATCCTGGTCGCCAGGGGAAGCCAGGTCC...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCAATCTCCTTTGATGCCTaGCAAGCCTTGGGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPISFDA*QALGSW Trigger: CCAGGACCCCAAGGCTTGCCAGGCATCAAAGGAGAT...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCAAACCCTTATCTCCTTTaGTGCCTGGCAAGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPNPYLL*CLASLG Trigger: CCCAAGGCTTGCCAGGCATCAAAGGAGATAAGGGTT...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCCATTAAACCATCAATaGCAGGTTTCCCATCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWETGNSRAGLRTATSRYPLNHQ*QVSHLD Trigger: GTCCAGATGGGAAACCTGGCATTGATGGTTTAATGG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAACCCGGCTCCCCTGGTaGACCTCTGATCTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKTRLPW*TSDLSQ Trigger: CTGGCTCAGATCAGAGGTCCACCAGGGGAGCCGGGT...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCAAATCCCCCGTTTGCCTaGATGACCCTTCACTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFQKILRNLASWVWSTCPNPPFA*MTLHSL Trigger: CAAGGAGTGAAGGGTCATCCAGGCAAACGGGGGATT...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAGACCCATCTCTCCCTTaGGTCCTGCCATGCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKDPSLP*VLPCPG Trigger: ACCCGGGCATGGCAGGACCCAAGGGAGAGATGGGTC...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGATTCTCCTCGAGGCCCTaGCTCCCCTTCTTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTEELLFTQRPEWCGQKRFSSRP*LPFFPR Trigger: CCTGGGAAAGAAGGGGAGCCAGGGCCTCGAGGAGAA...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAGGTCCAGGGATGCCTTaGTCTCCAGAGGCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKGPGMP*SPEAPT Trigger: TGTGGGTGCCTCTGGAGAGCAAGGCATCCCTGGACC...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAGCGAGCCACAGCACCTaGAGGAGAACGAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKASHST*RRTNRL Trigger: CAGCCTGTTCGTTCTCCTCCAGGTGCTGTGGCTCGC...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGACATCTGGGCCAGGTTTaGCAGGCTCTCCTTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PTEELLFTQRPEWCGQKRHLGQV*QALLWI Trigger: GATCCAAAGGAGAGCCTGGCAAACCTGGCCCAGATG...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAACCGGTTGTTCCCTTTaGGCCTGTTATCCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKTGCSL*ACYPLG Trigger: CCCCAGGGGATAACAGGCCCAAAGGGAACAACCGGT...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR GCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAACCTTGGGTCCAGTGTTaGCAATCTGACCCACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKPWVQC*QSDPLL Trigger: GAGCAGTGGGTCAGATTGGCAACACTGGACCCAAGG...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAATGCCTGGCAAGCCTTaGGGTCCTGGAATTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKMPGKP*GPGIPG Trigger: TCCAGGAATTCCAGGACCCCAAGGCTTGCCAGGCAT...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CCA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAACCCTTCACACCAGCTaGACAGTTGGTTGGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: PTEELLFTQRPEWCGQKRTLHTS*TVGWTQ Trigger: TTGTGTCCAACCAACTGTCCAGCTGGTGTGAAGGGT...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR TCA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAATCAGCAAGTTGCTCTTaGATCATCTTCAGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKSASCS*IIFSTT Trigger: TGTGGTGCTGAAGATGATTCAAGAGCAACTTGCTGA...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CCA 90 bp | TCTGGCACCTTGGCTCCCCACATCCCCCTTCTCACCGGCTCGGCCTaGTGGCCCTCTTGGGCCTTCTTCACCCGGTGGCCCAGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGTLAPHIPLLTGSA*WPSWAFFTRWPSSP Trigger: GGGGCTGCTGGGCCACCGGGTGAAGAAGGCCCAAGAGGGCCACCAGGCCGAGCCGGTGAGAAGGGGGATGTGGGGAGCCAAGGTGCCAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CCA 90 bp | TGGAGGGCCCTGCTCTCCTTTGGGGCCCTGTCGTCCTTGAGGGCCTaGCTGTCCCACTGGCCCCCTCTCGCCCTGGTCACCCTTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WRALLSFGALSSLRA*LSHWPPLALVTLLS Trigger: GGACAGAAGGGTGACCAGGGCGAGAGGGGGCCAGTGGGACAGCCAGGCCCTCAAGGACGACAGGGCCCCAAAGGAGAGCAGGGCCCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CCA 90 bp | GTGGCCCTCTTGGGCCTTCTTCACCCGGTGGCCCAGCAGCCCCGATaGAGCCCACCATGCCTTTATAGCCACGAGGACCCATCTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VALLGLLHPVAQQPR*SPPCLYSHEDPSLP Trigger: AGGGAGAGATGGGTCCTCGTGGCTATAAAGGCATGGTGGGCTCCATCGGGGCTGCTGGGCCACCGGGTGAAGAAGGCCCAAGAGGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS TCA 90 bp | TCCCCCTTCTCTCCACGCTTTCCCTTGGGTCCAGTGTTGCCAATCTaGCCCACTGCTCCCACGATGCCAGGAATGCCTCGGGGGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPFSPRFPLGPVLPI*PTAPTMPGMPRGPG Trigger: TCCCGGCCCCCGAGGCATTCCTGGCATCGTGGGAGCAGTGGGTCAGATTGGCAACACTGGACCCAAGGGAAAGCGTGGAGAGAAGGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS GCA 90 bp | GTCCAGTGTTGCCAATCTGACCCACTGCTCCCACGATGCCAGGAATaGCTCGGGGGCCGGGATGCCCATTGGGCCCCTGTTTGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VQCCQSDPLLPRCQE*LGGRDAHWAPVCLD Trigger: ATCCAGGCAAACAGGGGCCCAATGGGCATCCCGGCCCCCGAGGCATTCCTGGCATCGTGGGAGCAGTGGGTCAGATTGGCAACACTGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 90 bp | TGGCCCCCTCTCGCCCTGGTCACCCTTCTGTCCCATGATGCCCTGTaGACCAATTTCTCCTCGAGGCCCTGGCTCCCCTTCTTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPPLALVTLLSHDAL*TNFSSRPWLPFFPR Trigger: CCTGGGAAAGAAGGGGAGCCAGGGCCTCGAGGAGAAATTGGTCCACAGGGCATCATGGGACAGAAGGGTGACCAGGGCGAGAGGGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS-3UTR CAA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATGGGGCCCTGTCGTCCTaGAGGGCCTGGCTGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GWETGNSRAGLRTATSRYGALSS*RAWLSH Trigger: GTGGGACAGCCAGGCCCTCAAGGACGACAGGGCCCC...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 90 bp | TGGCCGTCCCACTTGTCCTGCACTGCCCTTCATGCCAGGAATGCCTaGGGTCCCATCCTTGCCATCAATGCCTGGTGGACCGGTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPSHLSCTALHARNA*GPILAINAWWTGCS Trigger: GGAACAACCGGTCCACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATTCCTGGCATGAAGGGCAGTGCAGGACAAGTGGGACGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 90 bp | CTTATCTCCTTTGATGCCTGGCAAGCCTTGGGGTCCTGGAATTCCTaGAGGGCCCTGCTCTCCTTTGGGGCCCTGTCGTCCTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LISFDAWQALGSWNS*RALLSFGALSSLRA Trigger: GGCCCTCAAGGACGACAGGGCCCCAAAGGAGAGCAGGGCCCTCCAGGAATTCCAGGACCCCAAGGCTTGCCAGGCATCAAAGGAGATAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 90 bp | TGCCCTTCATGCCAGGAATGCCTGGGGTCCCATCCTTGCCATCAATaGCTGGTGGACCGGTTGTTCCCTTTGGGCCTGTTATCCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CPSCQECLGSHPCHQ*LVDRLFPLGLLSPG Trigger: CCCAGGGGATAACAGGCCCAAAGGGAACAACCGGTCCACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATTCCTGGCATGAAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 90 bp | GTCCTGCACTGCCCTTCATGCCAGGAATGCCTGGGGTCCCATCCTTaGCATCAATGCCTGGTGGACCGGTTGTTCCCTTTGGGCCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VLHCPSCQECLGSHP*HQCLVDRLFPLGLL Trigger: TAACAGGCCCAAAGGGAACAACCGGTCCACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATTCCTGGCATGAAGGGCAGTGCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 90 bp | GTTTCCCATCTGGACCATCTGGGCCAGGTTTGCCAGGCTCTCCTTTaGATCCCGGAGGACCAACTTTACCTGGAGGCCCCTTGTCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSHLDHLGQVCQALL*IPEDQLYLEAPCHR Trigger: ACGGTGACAAGGGGCCTCCAGGTAAAGTTGGTCCTCCGGGATCCAAAGGAGAGCCTGGCAAACCTGGCCCAGATGGTCCAGATGGGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCAAGCCCAGGCTGGCCCTaGACTCCAGGGGTCCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GFQKILRNLASWVWSTCPSPGWP*TPGVPT Trigger: CGTGGGGACCCCTGGAGTCAAGGGCCAGCCTGGGCT...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTACCCTGTCTCCCGGGTaGTCCTGGCACGCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LRNLASWVWSTCPPRSDPTLSPG*SWHASI Trigger: GATCGAGGCGTGCCAGGACAACCCGGGAGACAGGGT...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCTCCCCATCCTTGCCATaGATTGCCTGGCCAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ETGNSRAGLRTATSRYSPSPSLP*IAWPGR Trigger: CCGGCCTGGCCAGGCAATCAATGGCAAGGATGGGGA...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCCCTGGGGTCCCATCCTaGCCATCAATGCCTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ETGNSRAGLRTATSRYSPPGVPS*PSMPGG Trigger: TCCACCAGGCATTGATGGCAAGGATGGGACCCCAGG...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCCTGGCCGTCCCACTaGTCCTGCACTGCCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GWETGNSRAGLRTATSRYSWPSH*SCTALH Trigger: ATGAAGGGCAGTGCAGGACAAGTGGGACGGCCAGGA...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCGATGCCTGGCAAGCCTaGGGGTCCTGGAATTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ETGNSRAGLRTATSRYSPDAWQA*GSWNSW Trigger: CCAGGAATTCCAGGACCCCAAGGCTTGCCAGGCATC...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCTCTCCACGGACTCCTaGCTGTCCCTTAAGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWETGNSRAGLRTATSRYLSTDS*LSLKPW Trigger: CCAGGGCTTAAGGGACAGCAAGGAGTCCGTGGAGAG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCCATTGGGCCCCTGTTaGCCTGGATATCCAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRNLASWVWSTCPPRSDPPLGPC*PGYPGG Trigger: GCCCCCTGGATATCCAGGCAAACAGGGGCCCAATGG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATCCTCGGTCCCCATCCTaGCCATTGATTGCCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWETGNSRAGLRTATSRYPRSPS*PLIAWP Trigger: TGGCCAGGCAATCAATGGCAAGGATGGGGACCGAGG...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGATGGATGTTTAAATACTGGGATGGGAGACAGGCAATAGCAGGGCTGGCCTGGTCCAGGGATGCCTaGCTCTCCAGAGGCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRWMFKYWDGRQAIAGLAWSRDA*LSRGTH Trigger: GTGGGTGCCTCTGGAGAGCAAGGCATCCCTGGACCA...GGCCAGCCCTGCTATTGCCTGTCTCCCATCCCAGTATTTAAACATCCATCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCCCAGGGCTTCTCGCTaGGCACTCACAGCTACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRNLASWVWSTCPPRSDPPRASR*ALTATS Trigger: TGAGGTAGCTGTGAGTGCCAAGCGAGAAGCCCTGGG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 90 bp | TCACTCCTTGCAAACCCTGAGGACCCTTCACACCAGCTGGACAGTTaGTTGGACACAAGAAATCCGCACTCCCTTCCAAGCCCTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLANPEDPSHQLDS*LDTRNPHSLPSPGW Trigger: CCATCCAGGGCTTGGAAGGGAGTGCGGATTTCTTGTGTCCAACCAACTGTCCAGCTGGTGTGAAGGGTCCTCAGGGTTTGCAAGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCCGGACCAGGCTCTCCCTaGGCTCCCATTAAACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ETGNSRAGLRTATSRYSPGPGSP*APIKPS Trigger: TGATGGTTTAATGGGAGCCAAGGGAGAGCCTGGTCC...GGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GGATGGGAGACAGGCAATAGCAGGGCTGGCCTAAGAACTGCCACCTCAAGGTATTCTCCACGCTTTCCCTaGGGTCCAGTGTTGCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: GWETGNSRAGLRTATSRYSPRFP*GPVLPI Trigger: GATTGGCAACACTGGACCCAAGGGAAAGCGTGGAGA...ATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCCTGTCTCCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAGTAGCCCCTGATGCCTaGGGGGCCCGGTGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKVAPDA*GARWSR Trigger: CCTGGACCACCGGGCCCCCAAGGCATCAGGGGCTAC...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAGGGCCGGGATGCCCATaGGGCCCCTGTTTGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PTEELLFTQRPEWCGQKRGPGCP*GPCLPG Trigger: TCCAGGCAAACAGGGGCCCAATGGGCATCCCGGCCC...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAGCACCCACATCTCCCTaGGGACCTGGCTTCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKAPTSP*GPGFPW Trigger: CCAGGGGAAGCCAGGTCCCAAGGGAGATGTGGGTGC...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | GGTTTCCAGAAGATCCTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCATGGCCTGGTTCACCCTaGTCTCCAGGACCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GFQKILRNLASWVWSTCPWPGSP*SPGPPF Trigger: AAAAGGAGGTCCTGGAGACAAGGGTGAACCAGGCCA...TGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAGGATCTTCTGGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGACTCCAGGACCTCCTTTaGTTCCAGGCTGACCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTEELLFTQRPEWCGQKRLQDLL*FQADPA Trigger: TGCCGGGTCAGCCTGGAACAAAAGGAGGTCCTGGAG...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAATCTAGCCTCCTGGGTCTGGAGTACATGTCCACCCAGAAGTGACCCTCTCAGCAAGTTGCTCTaGAATCATCTTCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRNLASWVWSTCPPRSDPLSKLL*NHLQHH Trigger: GTGGTGCTGAAGATGATTCAAGAGCAACTTGCTGAG...AGGGTCACTTCTGGGTGGACATGTACTCCAGACCCAGGAGGCTAGATTTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | CCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAAGAGAACACCAGCTGGACAGTaGGTTGGACACAAGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PTEELLFTQRPEWCGQKRTPAGQ*VGHKKS Trigger: GGATTTCTTGTGTCCAACCAACTGTCCAGCTGGTGT...TCTCTTTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS-3UTR CAA 90 bp | TGTAACCAACTGAGGAACTTTTATTTACACAAAGGCCAGAGTGGTGTGGGCAAAGAACCCTTATCTCCTTaGATGCCTGGCAAGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CNQLRNFYLHKGQSGVGKEPLSP*MPGKPW Trigger: CCAAGGCTTGCCAGGCATCAAAGGAGATAAGGGTTC...TTTGCCCACACCACTCTGGCCTTTGTGTAAATAAAAGTTCCTCAGTTGGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | GGTAGCCCTGCACTCCTGGGGCACCGGCATCTCCGCTaGGGCCGGGGTAGCCGGTCTCTCCACGGACTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSPALLGHRHLR*GRGSRSLHGLL Trigger: AAGGAGTCCGTGGAGAGACCGGCTACCCCGGCCCCAGCGGAGATGCCGGTGCCCCAGGAGTGCAGGGCTACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CAA 72 bp | CATCCCCCTTCTCACCGGCTCGGCCTGGTGGCCCTCTaGGGCCTTCTTCACCCGGTGGCCCAGCAGCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HPPSHRLGLVAL*GLLHPVAQQPR Trigger: TCGGGGCTGCTGGGCCACCGGGTGAAGAAGGCCCAAGAGGGCCACCAGGCCGAGCCGGTGAGAAGGGGGATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS TCA 72 bp | GTGGCCCTGGAGGACCCGGCTCCCCTGGTGGACCTCTaGTCTGAGCCAGGGCGAGCCACAGCACCTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VALEDPAPLVDL*SEPGRATAPGG Trigger: TCCTCCAGGTGCTGTGGCTCGCCCTGGCTCAGATCAGAGGTCCACCAGGGGAGCCGGGTCCTCCAGGGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CCA 72 bp | TTGGCTCCCCACATCCCCCTTCTCACCGGCTCGGCCTaGTGGCCCTCTTGGGCCTTCTTCACCCGGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LAPHIPLLTGSA*WPSWAFFTRWP Trigger: GGGCCACCGGGTGAAGAAGGCCCAAGAGGGCCACCAGGCCGAGCCGGTGAGAAGGGGGATGTGGGGAGCCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS TCA 72 bp | TCTCTCCCTTGGGTCCTGCCATGCCCGGGTAGCCCCTaGTGCCTTGGGGGCCCGGTGGTCCAGGGATGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLPWVLPCPGSP*CLGGPVVQGCL Trigger: AAGGCATCCCTGGACCACCGGGCCCCCAAGGCATCAGGGGCTACCCGGGCATGGCAGGACCCAAGGGAGAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | AGGGGGCCCAGGAGGTCCTGGAAGGCCCACCATCCCTaGTGCACCCAGGGCTTCTCGCTTGGCACTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGPRRSWKAHHP*CTQGFSLGTHS Trigger: GCTGTGAGTGCCAAGCGAGAAGCCCTGGGTGCAGCAGGGATGGTGGGCCTTCCAGGACCTCCTGGGCCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | TCGGCCTGGTGGCCCTCTTGGGCCTTCTTCACCCGGTaGCCCAGCAGCCCCGATGGAGCCCACCATGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SAWWPSWAFFTR*PSSPDGAHHAF Trigger: AAAGGCATGGTGGGCTCCATCGGGGCTGCTGGGCCACCGGGTGAAGAAGGCCCAAGAGGGCCACCAGGCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | CCCTGGGGATCCTCGGTCCCCATCCTTGCCATTGATTaGCTGGCCAGGCCGGCCAGGAAGACCTGGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PWGSSVPILAID*LARPARKTWDP Trigger: GGGATCCCAGGTCTTCCTGGCCGGCCTGGCCAGGCAATCAATGGCAAGGATGGGGACCGAGGATCCCCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | GGGGATCCTCGGTCCCCATCCTTGCCATTGATTGCCTaGCCAGGCCGGCCAGGAAGACCTGGGATCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GDPRSPSLPLIA*PGRPGRPGIPG Trigger: CCCAGGGATCCCAGGTCTTCCTGGCCGGCCTGGCCAGGCAATCAATGGCAAGGATGGGGACCGAGGATCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | TGCCAATCTGACCCACTGCTCCCACGATGCCAGGAATaGCTCGGGGGCCGGGATGCCCATTGGGCCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CQSDPLLPRCQE*LGGRDAHWAPV Trigger: AACAGGGGCCCAATGGGCATCCCGGCCCCCGAGGCATTCCTGGCATCGTGGGAGCAGTGGGTCAGATTGGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | AGACCTGGGATCCCTGGGGGCCCAGGCATCCCGGGATaGCCACGACCCATTTCTCCTCGATCCCCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPGIPGGPGIPG*PRPISPRSPFS Trigger: AGAGAAGGGGGATCGAGGAGAAATGGGTCGTGGCCATCCCGGGATGCCTGGGCCCCCAGGGATCCCAGGTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | TCTTTCCCAGGGGGACCAGAGACTCCCGGCAAGCCCTaGTGGCCTGGTTCACCCTTGTCTCCAGGACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SFPGGPETPGKP*WPGSPLSPGPP Trigger: AGGAGGTCCTGGAGACAAGGGTGAACCAGGCCAGCAGGGCTTGCCGGGAGTCTCTGGTCCCCCTGGGAAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | GTCCAGTGTTGCCAATCTGACCCACTGCTCCCACGATaGCAGGAATGCCTCGGGGGCCGGGATGCCCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: VQCCQSDPLLPR*QECLGGRDAHW Trigger: CCAATGGGCATCCCGGCCCCCGAGGCATTCCTGGCATCGTGGGAGCAGTGGGTCAGATTGGCAACACTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | TTGGGCCTTCTTCACCCGGTGGCCCAGCAGCCCCGATaGAGCCCACCATGCCTTTATAGCCACGAGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGLLHPVAQQPR*SPPCLYSHEDP Trigger: TGGGTCCTCGTGGCTATAAAGGCATGGTGGGCTCCATCGGGGCTGCTGGGCCACCGGGTGAAGAAGGCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | CTCGCCCTGGTCACCCTTCTGTCCCATGATGCCCTGTaGACCAATTTCTCCTCGAGGCCCTGGCTCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LALVTLLSHDAL*TNFSSRPWLPF Trigger: GAAGGGGAGCCAGGGCCTCGAGGAGAAATTGGTCCACAGGGCATCATGGGACAGAAGGGTGACCAGGGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CAA 90 bp | GGCTCTCCTTTGGATCCCGGAGGACCAACTTTACCTGGAGGCCCCTaGTCACCGTCGATGCCATCTGAACCAGGCACTCCTGGTGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPLDPGGPTLPGGP*SPSMPSEPGTPGGP Trigger: AGGGCCACCAGGAGTGCCTGGTTCAGATGGCATCGACGGTGACAAGGGGCCTCCAGGTAAAGTTGGTCCTCCGGGATCCAAAGGAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | GACCAACTTTACCTGGAGGCCCCTTGTCACCGTCGATaGCATCTGAACCAGGCACTCCTGGTGGCCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DQLYLEAPCHRR*HLNQALLVALV Trigger: CACCAGGGCCACCAGGAGTGCCTGGTTCAGATGGCATCGACGGTGACAAGGGGCCTCCAGGTAAAGTTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | GTTGGACACAAGAAATCCGCACTCCCTTCCAAGCCCTaGATGGTTCCTGGTCGGCCTGGTTTCCCAGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGHKKSALPSKP*MVPGRPGFPGG Trigger: GCCCCCTGGGAAACCAGGCCGACCAGGAACCATCCAGGGCTTGGAAGGGAGTGCGGATTTCTTGTGTCCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CAA 90 bp | GGTTTCCCATCTGGACCATCTGGGCCAGGTTTGCCAGGCTCTCCTTaGGATCCCGGAGGACCAACTTTACCTGGAGGCCCCTTGTCACCG | + |
|
Preference number: 6 (lower is better) Translates to: GFPSGPSGPGLPGSP*DPGGPTLPGGPLSP Trigger: CGGTGACAAGGGGCCTCCAGGTAAAGTTGGTCCTCCGGGATCCAAAGGAGAGCCTGGCAAACCTGGCCCAGATGGTCCAGATGGGAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | TCCCCTGGCGACCAGGATCACCCAGAATCCCCCGTTTaGCTGGATGACCCTTCACTCCTTGCAAACCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPGDQDHPESPV*LDDPSLLANPE Trigger: CTCAGGGTTTGCAAGGAGTGAAGGGTCATCCAGGCAAACGGGGGATTCTGGGTGATCCTGGTCGCCAGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | GTCCCACTTGTCCTGCACTGCCCTTCATGCCAGGAATaGCTGGGGTCCCATCCTTGCCATCAATGCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPLVLHCPSCQE*LGSHPCHQCLV Trigger: CACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATTCCTGGCATGAAGGGCAGTGCAGGACAAGTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS GCA 72 bp | CCCCCTTCTCTCCACGCTTTCCCTTGGGTCCAGTGTTaGCAATCTGACCCACTGCTCCCACGATGCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPSLHAFPWVQC*QSDPLLPRCQE Trigger: TTCCTGGCATCGTGGGAGCAGTGGGTCAGATTGGCAACACTGGACCCAAGGGAAAGCGTGGAGAGAAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
||
| CDS CCA 72 bp | GGTCTTCCCTGGGGAACCCTTATCTCCTTTGATGCCTaGCAAGCCTTGGGGTCCTGGAATTCCTGGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLPWGTLISFDA*QALGSWNSWRA Trigger: GGCCCTCCAGGAATTCCAGGACCCCAAGGCTTGCCAGGCATCAAAGGAGATAAGGGTTCCCCAGGGAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CAA 72 bp | CCTTGCCATCAATGCCTGGTGGACCGGTTGTTCCCTTaGGGCCTGTTATCCCCTGGGGTCCTCTGGCACCTT | + |
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Preference number: 6 (lower is better) Translates to: PCHQCLVDRLFP*GLLSPGVLWHL Trigger: AAGGTGCCAGAGGACCCCAGGGGATAACAGGCCCAAAGGGAACAACCGGTCCACCAGGCATTGATGGCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CAA 90 bp | TGTCCTGCACTGCCCTTCATGCCAGGAATGCCTGGGGTCCCATCCTaGCCATCAATGCCTGGTGGACCGGTTGTTCCCTTTGGGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: CPALPFMPGMPGVPS*PSMPGGPVVPFGPV Trigger: AACAGGCCCAAAGGGAACAACCGGTCCACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATTCCTGGCATGAAGGGCAGTGCAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS GCA 72 bp | TGCCAGGAATGCCTGGGGTCCCATCCTTGCCATCAATaGCTGGTGGACCGGTTGTTCCCTTTGGGCCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: CQECLGSHPCHQ*LVDRLFPLGLL Trigger: TAACAGGCCCAAAGGGAACAACCGGTCCACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATTCCTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CCA 72 bp | AATGCCTGGGGTCCCATCCTTGCCATCAATGCCTGGTaGACCGGTTGTTCCCTTTGGGCCTGTTATCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: NAWGPILAINAW*TGCSLWACYPL Trigger: CAGGGGATAACAGGCCCAAAGGGAACAACCGGTCCACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CCA 72 bp | AGGAATGCCTGGGGTCCCATCCTTGCCATCAATGCCTaGTGGACCGGTTGTTCCCTTTGGGCCTGTTATCCC | + |
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Preference number: 6 (lower is better) Translates to: RNAWGPILAINA*WTGCSLWACYP Trigger: GGGATAACAGGCCCAAAGGGAACAACCGGTCCACCAGGCATTGATGGCAAGGATGGGACCCCAGGCATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CAA 72 bp | TTGGATCCCGGAGGACCAACTTTACCTGGAGGCCCCTaGTCACCGTCGATGCCATCTGAACCAGGCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LDPGGPTLPGGP*SPSMPSEPGTP Trigger: AGGAGTGCCTGGTTCAGATGGCATCGACGGTGACAAGGGGCCTCCAGGTAAAGTTGGTCCTCCGGGATCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CAA 72 bp | CAGAATCCCCCGTTTGCCTGGATGACCCTTCACTCCTaGCAAACCCTGAGGACCCTTCACACCAGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: QNPPFAWMTLHS*QTLRTLHTSWT Trigger: TGTCCAGCTGGTGTGAAGGGTCCTCAGGGTTTGCAAGGAGTGAAGGGTCATCCAGGCAAACGGGGGATTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS GCA 72 bp | GACCAGGCTCTCCCTTGGCTCCCATTAAACCATCAATaGCAGGTTTCCCATCTGGACCATCTGGGCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: DQALPWLPLNHQ*QVSHLDHLGQV Trigger: AACCTGGCCCAGATGGTCCAGATGGGAAACCTGGCATTGATGGTTTAATGGGAGCCAAGGGAGAGCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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| CDS CAA 72 bp | AACCCTGAGGACCCTTCACACCAGCTGGACAGTTGGTaGGACACAAGAAATCCGCACTCCCTTCCAAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: NPEDPSHQLDSW*DTRNPHSLPSP Trigger: AGGGCTTGGAAGGGAGTGCGGATTTCTTGTGTCCAACCAACTGTCCAGCTGGTGTGAAGGGTCCTCAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030372.6 |
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