Pregenerated sensors for COL9A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026147Ensembl transcript IDs: ENSMUST00000054588.15, ENSMUST00000088349.3
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACCTACCTTCCTTCCATaGACAAGGAACAAGACTTAC | + |
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Preference number: 2 (lower is better) Translates to: HHAMYRDHFWDTALMKILPTFLP*TRNKTY Trigger: GTAAGTCTTGTTCCTTGTCCATGGAAGGAAGGTAGG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATGTTGTTGTTGTTGTTaGCACAGTGACCCACAACAC | + |
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Preference number: 2 (lower is better) Translates to: HHAMYRDHFWDTALMKILCCCCC*HSDPQH Trigger: GTGTTGTGGGTCACTGTGCCAACAACAACAACAACA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATTGTTGTTGGCACAGTaGCCCACAACACATCATATA | + |
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Preference number: 2 (lower is better) Translates to: HHAMYRDHFWDTALMKILLLLAQ*PTTHHI Trigger: TATATGATGTGTTGTGGGTCACTGTGCCAACAACAA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGCAACTGAGGTAATGTaGACAGCTTGTTGTTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: HHAMYRDHFWDTALMKILATEVM*TACCCC Trigger: ACAACAACAACAAGCTGTTCACATTACCTCAGTTGC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAAACCTTTGAGGCTTTaGCCCAGTTTTGGTATCGTT | + |
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Preference number: 2 (lower is better) Translates to: HHAMYRDHFWDTALMKILKPLRL*PSFGIV Trigger: AACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAATAATGACAGCAACTaGGGTAATGTGAACAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: HHAMYRDHFWDTALMKILNNDSN*GNVNSL Trigger: CAAGCTGTTCACATTACCTCAGTTGCTGTCATTATT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATTTGACTCTTGTCTGTaGACTCTCCTACCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: HHAMYRDHFWDTALMKILFDSCL*TLLPSF Trigger: GAAGGAAGGTAGGAGAGTCAACAGACAAGAGTCAAA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGTGAACAGCTTGTTGTaGTTGTTGTTGTTGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: HHAMYRDHFWDTALMKILVNSLL*LLLLAQ Trigger: CTGTGCCAACAACAACAACAACAACAAGCTGTTCAC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR TCA 72 bp | CCTACCTTCCTTCCATGGACAAGGAACAAGACTTACTaGATAGCACCAGTTGCTCTAAATCTGATTGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: PTFLPWTRNKTY*IAPVALNLIVK Trigger: CTTGACAATCAGATTTAGAGCAACTGGTGCTATTCAGTAAGTCTTGTTCCTTGTCCATGGAAGGAAGGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR TCA 72 bp | GTGAACAGCTTGTTGTTGTTGTTGTTGTTGGCACAGTaGCCCACAACACATCATATATCCATTCATAGCACA | + |
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Preference number: 3 (lower is better) Translates to: VNSLLLLLLLAQ*PTTHHISIHST Trigger: TGTGCTATGAATGGATATATGATGTGTTGTGGGTCACTGTGCCAACAACAACAACAACAACAAGCTGTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR TCA 72 bp | TTGGCTAAAGAGAAATTGAATTTGACTCTTGTCTGTTaGCTCTCCTACCTTCCTTCCATGGACAAGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: LAKEKLNLTLVC*LSYLPSMDKEQ Trigger: TTGTTCCTTGTCCATGGAAGGAAGGTAGGAGAGTCAACAGACAAGAGTCAAATTCAATTTCTCTTTAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR GCA 72 bp | GCCACAAAACATATGTGTGTCAGGGTATTACTTCTTTaGTTTCACGTGGATTTTAGAATACAAATGGGATTG | + |
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Preference number: 3 (lower is better) Translates to: ATKHMCVRVLLL*FHVDFRIQMGL Trigger: CAATCCCATTTGTATTCTAAAATCCACGTGAAAGCAAAGAAGTAATACCCTGACACACATATGTTTTGTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| 3UTR CCA 72 bp | TACTTCTTTGCTTTCACGTGGATTTTAGAATACAAATaGGATTGGATGCAGTACACACTATTCACAAATTCA | + |
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Preference number: 3 (lower is better) Translates to: YFFAFTWILEYK*DWMQYTLFTNS Trigger: TGAATTTGTGAATAGTGTGTACTGCATCCAATCCCATTTGTATTCTAAAATCCACGTGAAAGCAAAGAAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAGGCCCAGGAGGCCCTaGAGGCCCCTGCTCACCCGG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSRPRRP*RPLLTR Trigger: CCGGGTGAGCAGGGGCCTCCAGGGCCTCCTGGGCCT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGGCCCTGGAGGCCCCTaGTCACCCGGAGGACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSGPGGP*SPGGPL Trigger: GAGAGGTCCTCCGGGTGAGCAGGGGCCTCCAGGGCC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCGGGCCTCTACTGCCTaGAAGGCCCCTGGGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSRASTA*KAPGSP Trigger: CGGGGACCCAGGGGCCTTCCAGGCAGTAGAGGCCCG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACGGGCCTCTACTGCCTaGAAGGCCCCTGGGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILRASTA*KAPGSP Trigger: CGGGGACCCAGGGGCCTTCCAGGCAGTAGAGGCCCG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAGCCCAGTGGCACCCTaGTCTCCCTGCATGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSPVAP*SPCMPR Trigger: CCGGGGCATGCAGGGAGATCAGGGTGCCACTGGGCT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAGCCCAGTGGCACCCTaGTCTCCCTGCATGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSPVAP*SPCMPR Trigger: CCGGGGCATGCAGGGAGATCAGGGTGCCACTGGGCT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGGCCCTGGAGGCCCCTaGTCACCCGGAGGACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILGPGGP*SPGGPL Trigger: AAGAGGTCCTCCGGGTGAGCAGGGGCCTCCAGGGCC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTGCCCGGAGGGCCCTaGATACCAGGCAGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILLPGGP*IPGSPV Trigger: CACTGGGCTGCCTGGTATCCAGGGCCCTCCGGGCAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGCCTGGCTTGCCTGGTaGTCCTGGCTTGCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILAWLAW*SWLAWV Trigger: GACCCAGGCAAGCCAGGAGCACCAGGCAAGCCAGGC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGCCTGGCTTGCCTGGTaGTCCTGGCTTGCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSAWLAW*SWLAWV Trigger: GACCCAGGCAAGCCAGGAGCACCAGGCAAGCCAGGC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTACCGGGCCTCTACTaGCTGGAAGGCCCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILLPGLY*LEGPWV Trigger: GACCCAGGGGCCTTCCAGGCAGTAGAGGCCCGGTAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCCTGATCTCCCTGCATaGCCCGGGGTCCAGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSPDLPA*PGVQVV Trigger: GACCACCTGGACCCCGGGGCATGCAGGGAGATCAGG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACCTGATCTCCCTGCATaGCCCGGGGTCCAGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILPDLPA*PGVQVV Trigger: GACCACCTGGACCCCGGGGCATGCAGGGAGATCAGG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGCCCCGGGGTCCAGGTaGTCCTCTTGGTCCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILAPGSR*SSWSFH Trigger: GTGGAAGGACCAAGAGGACCACCTGGACCCCGGGGC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGCCCCGGGGTCCAGGTaGTCCTCTTGGTCCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSAPGSR*SSWSFH Trigger: GTGGAAGGACCAAGAGGACCACCTGGACCCCGGGGC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTTGCCTGGTGCTCCTaGCTTGCCTGGGTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILLAWCS*LAWVSR Trigger: CCTGGAGACCCAGGCAAGCCAGGAGCACCAGGCAAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAGCTCCTGGTGTGCCTaGCTTGCCTGGTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSSWCA*LAWCSW Trigger: CCAGGAGCACCAGGCAAGCCAGGCACACCAGGAGCT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAGCTCCTGGTGTGCCTaGCTTGCCTGGTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSSWCA*LAWCSW Trigger: CCAGGAGCACCAGGCAAGCCAGGCACACCAGGAGCT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTGTTCCACTGGGTCCTaGAGGTCCAGGAGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSCSTGS*RSRRAR Trigger: CCTGGCCCTCCTGGACCTCCAGGACCCAGTGGAACA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATGTTCCACTGGGTCCTaGAGGTCCAGGAGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILCSTGS*RSRRAR Trigger: CCTGGCCCTCCTGGACCTCCAGGACCCAGTGGAACA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAGGGCCTGGGTCACCTaGGAGACCTATCGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILRAWVT*ETYRSR Trigger: CCTGGAGCGATAGGTCTCCCAGGTGACCCAGGCCCT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAGGGCCTGGGTCACCTaGGAGACCTATCGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSRAWVT*ETYRSR Trigger: CCTGGAGCGATAGGTCTCCCAGGTGACCCAGGCCCT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCATCAGCTCCTGGTGTaGCTGGCTTGCCTGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSHQLLV*LACLVL Trigger: GAGCACCAGGCAAGCCAGGCACACCAGGAGCTGATG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCAGCTGCACCTGGAATaGCCTGAGGTCCAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSQLHLE*PEVQAL Trigger: GAGAGCCTGGACCTCAGGGCATTCCAGGTGCAGCTG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCACACCAGGAATTCCTaGCACTCCCGGGGGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSHTRNS*HSRGTL Trigger: CAAGGTCCCCCGGGAGTGGCAGGAATTCCTGGTGTG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTCCAGGAGGGCCAGGTaGTCCTCTTTTCCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSRRAR*SSFPRV Trigger: GACCCTGGGAAAAGAGGACCACCTGGCCCTCCTGGA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATCCAGGAGGGCCAGGTaGTCCTCTTTTCCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSRRAR*SSFPRV Trigger: GACCCTGGGAAAAGAGGACCACCTGGCCCTCCTGGA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGGTCCTGGAGGTCCTTaGTCGCCAACTTCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILGPGGP*SPTSPS Trigger: ACTGGGAGAAGTTGGCGATCAAGGACCTCCAGGACC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCCTGAACTTCCCAACTaGCCGGGCTTTCCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSPELPN*PGFPGA Trigger: TGCTCCAGGAAAGCCCGGTCAGTTGGGAAGTTCAGG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATCATGCAAACCTGCTTaGTGTGCTGGTCGGTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSCKPA*CAGRSA Trigger: CGCCGACCGACCAGCACATCAAGCAGGTTTGCATGA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTCATGCAAACCTGCTTaGTGTGCTGGTCGGTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSCKPA*CAGRSA Trigger: CGCCGACCGACCAGCACATCAAGCAGGTTTGCATGA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCAAACCTGCTTGATGTaGTGGTCGGTCGGCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSQTCLM*WSVGAL Trigger: CAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAGGACCAGGGGGTCCTaGAATACCACGGCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSRTRGS*NTTAWK Trigger: TTTCCAGGCCGTGGTATTCCAGGACCCCCTGGTCCT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAGGACCAGGGGGTCCTaGAATACCACGGCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILRTRGS*NTTAWK Trigger: TTTCCAGGCCGTGGTATTCCAGGACCCCCTGGTCCT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACCTTTCGCCCCTTTATaGCCCCTCATGCCTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILPFAPL*PLMPGR Trigger: CCTACCAGGCATGAGGGGCCATAAAGGGGCGAAAGG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATCTCCCAGTTCCCCCTaGTCACCCTCTTCACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSPSSP*SPSSPL Trigger: CAAGGGTGAAGAGGGTGACCAGGGGGAACTGGGAGA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTCTCCCAGTTCCCCCTaGTCACCCTCTTCACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSPSSP*SPSSPL Trigger: CAAGGGTGAAGAGGGTGACCAGGGGGAACTGGGAGA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAGGACCTGTTTCTCCTaGAGGGCCTCGCTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILRTCFS*RASLSL Trigger: CAAGGACAGCGAGGCCCTCCAGGAGAAACAGGTCCT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGCCCGTGTCTCCTTTTaGCCCTGGGGATCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILARVSF*PWGSRN Trigger: ATTCCTGGATCCCCAGGGCCAAAAGGAGACACGGGC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTCGGGAACCTTGAATaGCTCTGTCTCCCTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLGNLE*LCLPQD Trigger: GTCCTGAGGGAGACAGAGGCATTCAAGGTTCCCGAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTACCGGCAACACCTTTTaGACCAGGGATTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSTGNTF*TRDSRD Trigger: GTCCCTGGAATCCCTGGTGCAAAAGGTGTTGCCGGT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAACCGGCAACACCTTTTaGACCAGGGATTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILTGNTF*TRDSRD Trigger: GTCCCTGGAATCCCTGGTGCAAAAGGTGTTGCCGGT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCCAGTTTCCCTGGTATaGCTGGAGACCCTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSPVSLV*LETLLV Trigger: GACCAGAAGGGTCTCCAGGCATACCAGGGAAACTGG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACCAGTTTCCCTGGTATaGCTGGAGACCCTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILPVSLV*LETLLV Trigger: GACCAGAAGGGTCTCCAGGCATACCAGGGAAACTGG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCCACTTGTAAGGCTGTaGATCCCACCACCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSPLVRL*IPPPSG Trigger: TCCAGAGGGTGGTGGGATCCACAGCCTTACAAGTGG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAAGAAGGCAGCCGTTTaGAGACTCCCATCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSKKAAV*RLPSSP Trigger: GGGACTGGATGGGAGTCTCCAAACGGCTGCCTTCTT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATCCTGGGGGACCCTTTaGACCTCGGTCACCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSWGTL*TSVTIN Trigger: ATTGATGGTGACCGAGGTCCAAAGGGTCCCCCAGGA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTGGTGGGCAGGAATTaGGGCACAATGGGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLVGRN*GTMGLH Trigger: ATGGAGACCCATTGTGCCCCAATTCCTGCCCACCAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTGGTGGGCAGGAATTaGGGCACAATGGGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILLVGRN*GTMGLH Trigger: ATGGAGACCCATTGTGCCCCAATTCCTGCCCACCAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGTCTCCTTTTGGCCCTaGGGATCCAGGAATTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSVSFWP*GSRNSS Trigger: CGAGGAATTCCTGGATCCCCAGGGCCAAAAGGAGAC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATCGGCCATCTACACCTaGCAAGCCCGTGTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSAIYT*QARVSF Trigger: AAAGGAGACACGGGCTTGCCAGGTGTAGATGGCCGA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTCCAGGTGGTCCTCTTaGTCCTTCCACTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSRWSS*SFHSRK Trigger: CTTCCTGGAGTGGAAGGACCAAGAGGACCACCTGGA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGGGACCCTTAATGCCTaGGAGACCACGGATTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSGTLNA*ETTDSH Trigger: ATGGGAATCCGTGGTCTCCCAGGCATTAAGGGTCCC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATTTCCACGCCAATCATaGGCTTATGCCACCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILFPRQS*AYATGS Trigger: ACTCCCGGTGGCATAAGCTCATGATTGGCGTGGAAA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTCAGGGGGTCACAATaGATCAGCATCCACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLRGSQ*ISIHWS Trigger: ACTCCAGTGGATGCTGATTCATTGTGACCCCCTGAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTGATTGGCAGCTCATaGCAGGTTTCTCTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLIGSS*QVSLLG Trigger: ACCCAGGAGAGAAACCTGTCATGAGCTGCCAATCAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAATTCCTCGGGAACCTTaGATGCCTCTGTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILIPREP*MPLSPS Trigger: TGAGGGAGACAGAGGCATTCAAGGTTCCCGAGGAAT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCCACGGATTCCCATCTaGCCAGGGAAACCATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSPRIPI*PGKPFS Trigger: AGAGAATGGTTTCCCTGGTCAGATGGGAATCCGTGG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAACTTGCTCTCTCCCTaGGGAATCCTGGATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSNLLSP*GILDLP Trigger: TGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTTTATGGCCCCTCATaGCTGGTAGGCCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILLYGPS*LVGLDI Trigger: GATATCCAGGCCTACCAGGCATGAGGGGCCATAAAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTTTATGGCCCCTCATaGCTGGTAGGCCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLYGPS*LVGLDI Trigger: GATATCCAGGCCTACCAGGCATGAGGGGCCATAAAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATCCAAGGTCACCCCTTaGTCCTGCTTCACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILSKVTP*SCFTFF Trigger: GAAGAAGGTGAAGCAGGAGCAAGGGGTGACCTTGGA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTCCCTGCGGAATCCTaGATCTGCCAAATGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLPAES*ICQMFQ Trigger: CTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGACAGGTTTCTCTCCTaGGTCTCAGGGGGTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILDRFLS*VSGGHN Trigger: ATTGTGACCCCCTGAGACCCAGGAGAGAAACCTGTC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTATCCAATTGTTCCACTaGGTCCTGGAGGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSIQLFH*VLEVQE Trigger: CTCCTGGACCTCCAGGACCCAGTGGAACAATTGGAT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATTTCCCTGGTATGCCTaGAGACCCTTCTGGTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILFPWYA*RPFWSY Trigger: GTAGGACCAGAAGGGTCTCCAGGCATACCAGGGAAA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCACCCTGTTCACCCTTaGGACCCGGTTCACCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSHPVHP*DPVHQI Trigger: TATTTGGTGAACCGGGTCCCAAGGGTGAACAGGGTG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACACCCTGTTCACCCTTaGGACCCGGTTCACCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILHPVHP*DPVHQI Trigger: TATTTGGTGAACCGGGTCCCAAGGGTGAACAGGGTG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAACCCACAGATCCCTTTaGGCCAGGTTGTCCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILTHRSL*ARLSHI Trigger: GATATGGGACAACCTGGCCCAAAGGGATCTGTGGGT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR TCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACATCTTGGCCAATCCTaGTCTTGGGACACAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILHLGQS*SWDTVH Trigger: GTGAACTGTGTCCCAAGATCAGGATTGGCCAAGATG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACGGCCCTTTGCTAAATaGTCTTTGACCAGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILRPFAK*SLTRLQ Trigger: CTGCAGTCTGGTCAAAGAGCATTTAGCAAAGGGCCG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCGGCCCTTTGCTAAATaGTCTTTGACCAGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSRPFAK*SLTRLQ Trigger: CTGCAGTCTGGTCAAAGAGCATTTAGCAAAGGGCCG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGTGTCCTTGTCTTCCTaGCTCGCCGATTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILVSLSS*LADFSF Trigger: AAAGGAGAAATCGGCGAGCCAGGAAGACAAGGACAC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTTAGGACCTCTTCCTaGAGGACCACGTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLRTSS*RTTFSF Trigger: AAAGGAGAACGTGGTCCTCCAGGAAGAGGTCCTAAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGCGGAATCCTGGATCTaGCAAATGTTCCAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILAESWI*QMFQCF Trigger: AAAGCACTGGAACATTTGGCAGATCCAGGATTCCGC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTTCAGGCAGTCCACTaGGATACAAATGCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLQAVH*DTNALL Trigger: CAACAAGGCATTTGTATCCCAGTGGACTGCCTGAAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACCATCCGCATCAATCTaGCCTCTTGGCTTTATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILPSASI*PLGFIG Trigger: ACCTATAAAGCCAAGAGGCCAGATTGATGCGGATGG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGCCTTGTTGGAATCCTaGAGTCTACATTACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSALLES*SLHYFP Trigger: TGGGAAGTAATGTAGACTTCAGGATTCCAACAAGGC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTATTGGCAGGAAATCTTaGACGACGCTTAAGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSIGRKS*TTLKSC Trigger: GCAACTCTTAAGCGTCGTGCAAGATTTCCTGCCAAT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR GCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAAGTTTTCCCAGCACTaGAAAGCCATCCGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILKFSQH*KAIRIN Trigger: ATTGATGCGGATGGCTTTGCAGTGCTGGGAAAACTT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR CCA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGCGACAGACTTTGTTTaGCCATTTATCTTCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHAMYRDHFWDTALMKILATDFV*PFIFTP Trigger: TGGCGTGAAGATAAATGGCCAAACAAAGTCTGTCGC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTATCCAGTCCCTTGTATaGAAATGCGACAGACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSIQSLV*KCDRLC Trigger: ACAAAGTCTGTCGCATTTTCATACAAGGGACTGGAT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAATGGGTCTCCATCATaGAATCCAATTGTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSNGSPS*NPIVPL Trigger: CAGTGGAACAATTGGATTTCATGATGGAGACCCATT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTGCCAAATGTTCCAGTaGTTTTCAAGTGTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSCQMFQ*FSSVLP Trigger: TGGAAGCACACTTGAAAAGCACTGGAACATTTGGCA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR TCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTTCTCAATTTGGAACTaGGAAATCAGGTCAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSFSIWN*EIRSNP Trigger: AGGGTTTGACCTGATTTCTCAGTTCCAAATTGAGAA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR CCA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTATACAAATGCCTTGTTaGAATCCTGAAGTCTACATT | + |
|
Preference number: 4 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSIQMPC*NPEVYI Trigger: AATGTAGACTTCAGGATTCCAACAAGGCATTTGTAT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CCA 90 bp | CGGTCGGCGCTCTGCCCGGAGGGCCCTGGATACCAGGCAGCCCAGTaGCACCCTGATCTCCCTGCATGCCCCGGGGTCCAGGTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSALCPEGPGYQAAQ*HPDLPACPGVQVVL Trigger: GAGGACCACCTGGACCCCGGGGCATGCAGGGAGATCAGGGTGCCACTGGGCTGCCTGGTATCCAGGGCCCTCCGGGCAGAGCGCCGACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS GCA 90 bp | TCCCTGGTATGCCTGGAGACCCTTCTGGTCCTACCGGGCCTCTACTaGCTGGAAGGCCCCTGGGTCCCCGAGGTCCAACCTCTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVCLETLLVLPGLY*LEGPWVPEVQPLLG Trigger: CCCCAGGAGAGGTTGGACCTCGGGGACCCAGGGGCCTTCCAGGCAGTAGAGGCCCGGTAGGACCAGAAGGGTCTCCAGGCATACCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 90 bp | CAGCCCAGTGGCACCCTGATCTCCCTGCATGCCCCGGGGTCCAGGTaGTCCTCTTGGTCCTTCCACTCCAGGAAGCCCTCTGATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPSGTLISLHAPGSR*SSWSFHSRKPSDSF Trigger: GAAGGAATCAGAGGGCTTCCTGGAGTGGAAGGACCAAGAGGACCACCTGGACCCCGGGGCATGCAGGGAGATCAGGGTGCCACTGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS GCA 90 bp | TCCGCAAAATGCTCTTGCACGACTCTCATGCAAACCTGCTTGATGTaGTGGTCGGTCGGCGCTCTGCCCGGAGGGCCCTGGATACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAKCSCTTLMQTCLM*WSVGALPGGPWIPG Trigger: GCCTGGTATCCAGGGCCCTCCGGGCAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS GCA 90 bp | GCTGCCATTTCCGCAAAATGCTCTTGCACGACTCTCATGCAAACCTaGTTGATGTGCTGGTCGGTCGGCGCTCTGCCCGGAGGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAISAKCSCTTLMQT*LMCWSVGALPGGPW Trigger: CCAGGGCCCTCCGGGCAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 90 bp | GCAAAATGCTCTTGCACGACTCTCATGCAAACCTGCTTGATGTGCTaGTCGGTCGGCGCTCTGCCCGGAGGGCCCTGGATACCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKCSCTTLMQTCLMC*SVGALPGGPWIPGS Trigger: GCTGCCTGGTATCCAGGGCCCTCCGGGCAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS TCA 90 bp | CCATTTCCGCAAAATGCTCTTGCACGACTCTCATGCAAACCTGCTTaGTGTGCTGGTCGGTCGGCGCTCTGCCCGGAGGGCCCTGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: PFPQNALARLSCKPA*CAGRSALCPEGPGY Trigger: GTATCCAGGGCCCTCCGGGCAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 90 bp | TCGGGAACCTTGAATGCCTCTGTCTCCCTCAGGACCTGTTTCTCCTaGAGGGCCTCGCTGTCCTTGATCACCAGCTGCACCTGGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGTLNASVSLRTCFS*RASLSLITSCTWNA Trigger: GGCATTCCAGGTGCAGCTGGTGATCAAGGACAGCGAGGCCCTCCAGGAGAAACAGGTCCTGAGGGAGACAGAGGCATTCAAGGTTCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 90 bp | ATCTCGGCCATCTACACCTGGCAAGCCCGTGTCTCCTTTTGGCCCTaGGGATCCAGGAATTCCTCGGGAACCTTGAATGCCTCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISAIYTWQARVSFWP*GSRNSSGTLNASVS Trigger: GGAGACAGAGGCATTCAAGGTTCCCGAGGAATTCCTGGATCCCCAGGGCCAAAAGGAGACACGGGCTTGCCAGGTGTAGATGGCCGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 90 bp | CTTTGTCCCGGGCATTCCTGGTATTCCATCTCGGCCATCTACACCTaGCAAGCCCGTGTCTCCTTTTGGCCCTGGGGATCCAGGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCPGHSWYSISAIYT*QARVSFWPWGSRNS Trigger: GGAATTCCTGGATCCCCAGGGCCAAAAGGAGACACGGGCTTGCCAGGTGTAGATGGCCGAGATGGAATACCAGGAATGCCCGGGACAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS GCA 90 bp | GTGTCTGGTCTCTTGAGGCTGGCTGCCATTTCCGCAAAATGCTCTTaGACGACTCTCATGCAAACCTGCTTGATGTGCTGGTCGGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSGLLRLAAISAKCS*TTLMQTCLMCWSVG Trigger: GCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGGCAGCCAGCCTCAAGAGACCAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 90 bp | CGGAGGACCTCTCTCATCAGTGGTCTGGCTGGTTGTGATTCTGATTaGCAGCTCATGACAGGTTTCTCTCCTGGGTCTCAGGGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RRTSLISGLAGCDSD*QLMTGFSPGSQGVT Trigger: TGTGACCCCCTGAGACCCAGGAGAGAAACCTGTCATGAGCTGCCAATCAGAATCACAACCAGCCAGACCACTGATGAGAGAGGTCCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS GCA 90 bp | GCTCCTGTGTCTGGTCTCTTGAGGCTGGCTGCCATTTCCGCAAAATaGTCTTGCACGACTCTCATGCAAACCTGCTTGATGTGCTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: APVSGLLRLAAISAK*SCTTLMQTCLMCWS Trigger: CGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGGCAGCCAGCCTCAAGAGACCAGACACAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTAGGGCCTCGCTGTCCTaGATCACCAGCTGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSRASLS*ITSCTW Trigger: CCAGGTGCAGCTGGTGATCAAGGACAGCGAGGCCCT...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGTCCTGGGGGACCCTTaGGACCTCGGTCACCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILVLGDP*DLGHHQ Trigger: TTGATGGTGACCGAGGTCCAAAGGGTCCCCCAGGAC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGTCCTGGGGGACCCTTaGGACCTCGGTCACCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSVLGDP*DLGHHQ Trigger: TTGATGGTGACCGAGGTCCAAAGGGTCCCCCAGGAC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAGCCCGTGTCTCCTTTaGGCCCTGGGGATCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILSPCLL*ALGIQE Trigger: TTCCTGGATCCCCAGGGCCAAAAGGAGACACGGGCT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS GCA 90 bp | TTTATCTTCACGCCAACTTGCTCTCTCCCTGCGGAATCCTGGATCTaGCAAATGTTCCAGTGCTTTTCAAGTGTGCTTCCAGTCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FIFTPTCSLPAESWI*QMFQCFSSVLPVIR Trigger: CCGGATGACTGGAAGCACACTTGAAAAGCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CCA 90 bp | TGGCCATTTATCTTCACGCCAACTTGCTCTCTCCCTGCGGAATCCTaGATCTGCCAAATGTTCCAGTGCTTTTCAAGTGTGCTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WPFIFTPTCSLPAES*ICQMFQCFSSVLPV Trigger: GACTGGAAGCACACTTGAAAAGCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAATGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CCA 90 bp | CACCGGGAGTCAAACAAGGACGGCAAATTCAAGAAGGCAGCCGTTTaGAGACTCCCATCCAGTCCCTTGTATGAAAATGCGACAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: HRESNKDGKFKKAAV*RLPSSPLYENATDF Trigger: AAAGTCTGTCGCATTTTCATACAAGGGACTGGATGGGAGTCTCCAAACGGCTGCCTTCTTGAATTTGCCGTCCTTGTTTGACTCCCGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACAAGAAGGCAGCCGTTaGGAGACTCCCATCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILQEGSR*ETPIQS Trigger: GGACTGGATGGGAGTCTCCAAACGGCTGCCTTCTTG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTCCTTTTTGTCCCCTaGGTCCAACAGAGCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILLLFVP*VQQSQG Trigger: CCCCTGGCTCTGTTGGACCAAGGGGACAAAAAGGAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTCCTTTTTGTCCCCTaGGTCCAACAGAGCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLLFVP*VQQSQG Trigger: CCCCTGGCTCTGTTGGACCAAGGGGACAAAAAGGAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAGGTCCTGGAGGTCCTaGATCGCCAACTTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILRSWRS*IANFSQ Trigger: CTGGGAGAAGTTGGCGATCAAGGACCTCCAGGACCT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTCCCTGCTTCACCCTTaGTCCCGGGCATTCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSLLHP*SRAFLV Trigger: TACCAGGAATGCCCGGGACAAAGGGTGAAGCAGGGA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATCCCTGCTTCACCCTTaGTCCCGGGCATTCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILSLLHP*SRAFLV Trigger: TACCAGGAATGCCCGGGACAAAGGGTGAAGCAGGGA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCACCGGCAACACCTTTaGCACCAGGGATTCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSHRQHL*HQGFQG Trigger: TCCCTGGAATCCCTGGTGCAAAAGGTGTTGCCGGTG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGTCCAGGTGGTCCTCTaGGTCCTTCCACTCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSVQVVL*VLPLQE Trigger: TTCCTGGAGTGGAAGGACCAAGAGGACCACCTGGAC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTCATGCAAACCTGCTaGATGTGCTGGTCGGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILLMQTC*MCWSVG Trigger: GCCGACCGACCAGCACATCAAGCAGGTTTGCATGAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACCTGTGTCTGGTCTCTaGAGGCTGGCTGCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILPVSGL*RLAAIS Trigger: GGAAATGGCAGCCAGCCTCAAGAGACCAGACACAGG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCCTGTGTCTGGTCTCTaGAGGCTGGCTGCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSPVSGL*RLAAIS Trigger: GGAAATGGCAGCCAGCCTCAAGAGACCAGACACAGG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS GCA 90 bp | GAAAATGCGACAGACTTTGTTTGGCCATTTATCTTCACGCCAACTTaGTCTCTCCCTGCGGAATCCTGGATCTGCCAAATGTTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ENATDFVWPFIFTPT*SLPAESWICQMFQC Trigger: GCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAATGGCCAAACAAAGTCTGTCGCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS GCA 90 bp | ATAAAAAGAGTGGCGCTTGTTCTTTCCACGCCAATCATGAGCTTATaGCACCGGGAGTCAAACAAGGACGGCAAATTCAAGAAGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IKRVALVLSTPIMSL*HRESNKDGKFKKAA Trigger: GGCTGCCTTCTTGAATTTGCCGTCCTTGTTTGACTCCCGGTGGCATAAGCTCATGATTGGCGTGGAAAGAACAAGCGCCACTCTTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATTCACCCTTGTGTCCTaGTCTTCCTGGCTCGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILFTLVS*SSWLAD Trigger: ATCGGCGAGCCAGGAAGACAAGGACACAAGGGTGAA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTCACCCTCTTCACCCTaGTGTCCTTGTCTTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSPSSP*CPCLPG Trigger: GCCAGGAAGACAAGGACACAAGGGTGAAGAGGGTGA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTCCAAGGTCACCCCTaGCTCCTGCTTCACCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILLQGHP*LLLHLL Trigger: AAGAAGGTGAAGCAGGAGCAAGGGGTGACCTTGGAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCTCCAAGGTCACCCCTaGCTCCTGCTTCACCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSLQGHP*LLLHLL Trigger: AAGAAGGTGAAGCAGGAGCAAGGGGTGACCTTGGAG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTCCCTTTGGGCCAGGTaGTCCCATATCTCCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSSLWAR*SHISKV Trigger: GACCTTGGAGATATGGGACAACCTGGCCCAAAGGGA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS TCA 90 bp | ACCCTCTGGATAGTCCTTCGAGATGCAGCCTTCTCAATTTGGAACTaGGAAATCAGGTCAAACCCTGGTAAGTCATCTTGGCCAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLWIVLRDAAFSIWN*EIRSNPGKSSWPIL Trigger: CAGGATTGGCCAAGATGACTTACCAGGGTTTGACCTGATTTCTCAGTTCCAAATTGAGAAGGCTGCATCTCGAAGGACTATCCAGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTACCCACAGATCCCTTaGGGCCAGGTTGTCCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSYPQIP*GQVVPY Trigger: ATATGGGACAACCTGGCCCAAAGGGATCTGTGGGTA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS TCA 90 bp | ATTCAAGAAGGCAGCCGTTTGGAGACTCCCATCCAGTCCCTTGTATaGAAATGCGACAGACTTTGTTTGGCCATTTATCTTCACGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQEGSRLETPIQSLV*KCDRLCLAIYLHAN Trigger: GTTGGCGTGAAGATAAATGGCCAAACAAAGTCTGTCGCATTTTCATACAAGGGACTGGATGGGAGTCTCCAAACGGCTGCCTTCTTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS GCA 90 bp | ACTTGCTCTCTCCCTGCGGAATCCTGGATCTGCCAAATGTTCCAGTaGTTTTCAAGTGTGCTTCCAGTCATCCGGAAAGTAGTTAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TCSLPAESWICQMFQ*FSSVLPVIRKVVKK Trigger: CTTTTTAACTACTTTCCGGATGACTGGAAGCACACTTGAAAAGCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS GCA 90 bp | AGACTTTGTTTGGCCATTTATCTTCACGCCAACTTGCTCTCTCCCTaGGGAATCCTGGATCTGCCAAATGTTCCAGTGCTTTTCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLCLAIYLHANLLSP*GILDLPNVPVLFKC Trigger: ACACTTGAAAAGCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAATGGCCAAACAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTACTCCCATCCAGTCCCTaGTATGAAAATGCGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILLPSSP*YENATD Trigger: GTCTGTCGCATTTTCATACAAGGGACTGGATGGGAG...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAACCAGGTTCTCCTTTTaGTCCCCTTGGTCCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILTRFSF*SPWSNR Trigger: TCTGTTGGACCAAGGGGACAAAAAGGAGAACCTGGT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAGCACCCTTTTCTCCTTaGTCTCCAACTATGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILAPFSP*SPTMPV Trigger: CACTGGCATAGTTGGAGACAAAGGAGAAAAGGGTGC...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTGCACCCTTTTCTCCTTaGTCTCCAACTATGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSAPFSP*SPTMPV Trigger: CACTGGCATAGTTGGAGACAAAGGAGAAAAGGGTGC...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTTGCGACAGACTTTGTTaGGCCATTTATCTTCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSCDRLC*AIYLHA Trigger: GGCGTGAAGATAAATGGCCAAACAAAGTCTGTCGCA...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCATCATGAAATCCAATaGTTCCACTGGGTCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSHHEIQ*FHWVLE Trigger: CTCCAGGACCCAGTGGAACAATTGGATTTCATGATG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATTCCGCAAAATGCTCTaGCACGACTCTCATGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILFRKML*HDSHAN Trigger: GTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTATGCAGCCTTCTCAATTaGGAACTGAGAAATCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILCSLLN*ELRNQV Trigger: GACCTGATTTCTCAGTTCCAAATTGAGAAGGCTGCA...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCAGAGGTGAAACCTTTGAGGCTTTGCCCCAGTTTTGGTATCGTTTCTCCATTAGAAATGGAATaGGCAGGAAATCTTGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: MMSEVKPLRLCPSFGIVSPLEME*AGNLAR Trigger: TCGTGCAAGATTTCCTGCCAATTCCATTTCTAATGG...AGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGGTTTCACCTCTGACATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS-3UTR CAA 90 bp | CACCATGCGATGTATAGAGACCACTTTTGGGACACAGCCCTGATGAAGATTTTAAAAATGCGACAGACTTaGTTTGGCCATTTATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HHAMYRDHFWDTALMKILKMRQT*FGHLSS Trigger: TGAAGATAAATGGCCAAACAAAGTCTGTCGCATTTT...TAAAATCTTCATCAGGGCTGTGTCCCAAAAGTGGTCTCTATACATCGCATGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS CCA 72 bp | CTCTGCCCGGAGGGCCCTGGATACCAGGCAGCCCAGTaGCACCCTGATCTCCCTGCATGCCCCGGGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCPEGPGYQAAQ*HPDLPACPGVQ Trigger: CTGGACCCCGGGGCATGCAGGGAGATCAGGGTGCCACTGGGCTGCCTGGTATCCAGGGCCCTCCGGGCAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS TCA 72 bp | GGCCCTGGAGGCCCCTGCTCACCCGGAGGACCTCTTTaGGCAGCACACAAGCGGAGCCCAGACAGCATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GPGGPCSPGGPL*AAHKRSPDSIS Trigger: ACTGATGCTGTCTGGGCTCCGCTTGTGTGCTGCTCAAAGAGGTCCTCCGGGTGAGCAGGGGCCTCCAGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088349.3 |
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| CDS GCA 72 bp | TACCAGGCAGCCCAGTGGCACCCTGATCTCCCTGCATaGCCCGGGGTCCAGGTGGTCCTCTTGGTCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: YQAAQWHPDLPA*PGVQVVLLVLP Trigger: TGGAAGGACCAAGAGGACCACCTGGACCCCGGGGCATGCAGGGAGATCAGGGTGCCACTGGGCTGCCTGGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 72 bp | GGCACCCTGATCTCCCTGCATGCCCCGGGGTCCAGGTaGTCCTCTTGGTCCTTCCACTCCAGGAAGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GTLISLHAPGSR*SSWSFHSRKPS Trigger: AGAGGGCTTCCTGGAGTGGAAGGACCAAGAGGACCACCTGGACCCCGGGGCATGCAGGGAGATCAGGGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CAA 72 bp | AGGCCCTGGAGGCCCCTGCTCACCCGGAGGACCTCTTaGAGCAGCACACAAGCGGAGCCCAGACAGCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPWRPLLTRRTS*SSTQAEPRQHQ Trigger: CTGATGCTGTCTGGGCTCCGCTTGTGTGCTGCTCAAAGAGGTCCTCCGGGTGAGCAGGGGCCTCCAGGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088349.3 |
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| CDS GCA 72 bp | TGCTCTTGCACGACTCTCATGCAAACCTGCTTGATGTaGTGGTCGGTCGGCGCTCTGCCCGGAGGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CSCTTLMQTCLM*WSVGALPGGPW Trigger: CCAGGGCCCTCCGGGCAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS TCA 72 bp | TTGAGCAGCACACAAGCGGAGCCCAGACAGCATCAGTaGCAGCCCAAGCACTCCTCGTCCCCAGGCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSTQAEPRQHQ*QPKHSSSPGSP Trigger: TGGGCTGCCTGGGGACGAGGAGTGCTTGGGCTGTCACTGATGCTGTCTGGGCTCCGCTTGTGTGCTGCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088349.3 |
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| CDS CCA 72 bp | AGGAAGGCCAGGGCTGCCAACAGATCCCAGTTTCCCTaGTATGCCTGGAGACCCTTCTGGTCCTACCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKARAANRSQFP*YAWRPFWSYRA Trigger: GGCCCGGTAGGACCAGAAGGGTCTCCAGGCATACCAGGGAAACTGGGATCTGTTGGCAGCCCTGGCCTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CAA 72 bp | TCAGACCCGGCTCCCCGGGGTTACCCACAGATCCCTTaGGGCCAGGTTGTCCCATATCTCCAAGGTCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: SDPAPRGYPQIP*GQVVPYLQGHP Trigger: GGGGTGACCTTGGAGATATGGGACAACCTGGCCCAAAGGGATCTGTGGGTAACCCCGGGGAGCCGGGTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS GCA 72 bp | GGCCTCGCTGTCCTTGATCACCAGCTGCACCTGGAATaGCCTGAGGTCCAGGCTCTCCATCAAATCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLAVLDHQLHLE*PEVQALHQIPE Trigger: CTCGGGGATTTGATGGAGAGCCTGGACCTCAGGGCATTCCAGGTGCAGCTGGTGATCAAGGACAGCGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 72 bp | ATCTCCCTGCATGCCCCGGGGTCCAGGTGGTCCTCTTaGTCCTTCCACTCCAGGAAGCCCTCTGATTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISLHAPGSRWSS*SFHSRKPSDSF Trigger: GAAGGAATCAGAGGGCTTCCTGGAGTGGAAGGACCAAGAGGACCACCTGGACCCCGGGGCATGCAGGGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CCA 72 bp | GACCTTGCTCTCCGTCACGGCCATTTTTCCCATAGCTaGCAGGGCCTGGGTCACCTGGGAGACCTATCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLALRHGHFSHS*QGLGHLGDLSL Trigger: GAGCGATAGGTCTCCCAGGTGACCCAGGCCCTGCCAGCTATGGGAAAAATGGCCGTGACGGAGAGCAAGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS TCA 72 bp | CAAAATGCTCTTGCACGACTCTCATGCAAACCTGCTTaGTGTGCTGGTCGGTCGGCGCTCTGCCCGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QNALARLSCKPA*CAGRSALCPEG Trigger: GCCCTCCGGGCAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS CCA 72 bp | GGGCATTCCTGGTATTCCATCTCGGCCATCTACACCTaGCAAGCCCGTGTCTCCTTTTGGCCCTGGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GHSWYSISAIYT*QARVSFWPWGS Trigger: GGATCCCCAGGGCCAAAAGGAGACACGGGCTTGCCAGGTGTAGATGGCCGAGATGGAATACCAGGAATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS CAA 90 bp | GCCATTTCCGCAAAATGCTCTTGCACGACTCTCATGCAAACCTGCTaGATGTGCTGGTCGGTCGGCGCTCTGCCCGGAGGGCCCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: AISAKCSCTTLMQTC*MCWSVGALPGGPWI Trigger: TATCCAGGGCCCTCCGGGCAGAGCGCCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS CCA 72 bp | TTGAATGCCTCTGTCTCCCTCAGGACCTGTTTCTCCTaGAGGGCCTCGCTGTCCTTGATCACCAGCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: LNASVSLRTCFS*RASLSLITSCT Trigger: GGTGCAGCTGGTGATCAAGGACAGCGAGGCCCTCCAGGAGAAACAGGTCCTGAGGGAGACAGAGGCATTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS CAA 72 bp | GAGCACCCGTGTTACCCTTTTCACCGGCAACACCTTTaGCACCAGGGATTCCAGGGACACCTGGTAAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EHPCYPFHRQHL*HQGFQGHLVSP Trigger: AGGGCTTACCAGGTGTCCCTGGAATCCCTGGTGCAAAAGGTGTTGCCGGTGAAAAGGGTAACACGGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS CAA 72 bp | CTCCCAGGAAGACCAGAGGCTCCTGTGTCTGGTCTCTaGAGGCTGGCTGCCATTTCCGCAAAATGCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPGRPEAPVSGL*RLAAISAKCSC Trigger: GCAAGAGCATTTTGCGGAAATGGCAGCCAGCCTCAAGAGACCAGACACAGGAGCCTCTGGTCTTCCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS TCA 72 bp | TTTGGCCCTGGGGATCCAGGAATTCCTCGGGAACCTTaGATGCCTCTGTCTCCCTCAGGACCTGTTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FGPGDPGIPREP*MPLSPSGPVSP Trigger: AGGAGAAACAGGTCCTGAGGGAGACAGAGGCATTCAAGGTTCCCGAGGAATTCCTGGATCCCCAGGGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS TCA 72 bp | TCCCAGGAAGACCAGAGGCTCCTGTGTCTGGTCTCTTaGGGCTGGCTGCCATTTCCGCAAAATGCTCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SQEDQRLLCLVS*GWLPFPQNALA Trigger: TGCAAGAGCATTTTGCGGAAATGGCAGCCAGCCTCAAGAGACCAGACACAGGAGCCTCTGGTCTTCCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS CAA 72 bp | TTTTGGCCCTGGGGATCCAGGAATTCCTCGGGAACCTaGAATGCCTCTGTCTCCCTCAGGACCTGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWPWGSRNSSGT*NASVSLRTCFS Trigger: GGAGAAACAGGTCCTGAGGGAGACAGAGGCATTCAAGGTTCCCGAGGAATTCCTGGATCCCCAGGGCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS CAA 90 bp | TGTGTCTGGTCTCTTGAGGCTGGCTGCCATTTCCGCAAAATGCTCTaGCACGACTCTCATGCAAACCTGCTTGATGTGCTGGTCGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CVWSLEAGCHFRKML*HDSHANLLDVLVGR Trigger: CCGACCGACCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGGCAGCCAGCCTCAAGAGACCAGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS TCA 72 bp | GTGGTCTGGCTGGTTGTGATTCTGATTGGCAGCTCATaGCAGGTTTCTCTCCTGGGTCTCAGGGGGTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: VVWLVVILIGSS*QVSLLGLRGSQ Trigger: TTGTGACCCCCTGAGACCCAGGAGAGAAACCTGTCATGAGCTGCCAATCAGAATCACAACCAGCCAGACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS TCA 72 bp | GGTGGGCAGGAATTGGGGCACAATGGGTCTCCATCATaGAATCCAATTGTTCCACTGGGTCCTGGAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGQELGHNGSPS*NPIVPLGPGGP Trigger: TGGACCTCCAGGACCCAGTGGAACAATTGGATTTCATGATGGAGACCCATTGTGCCCCAATTCCTGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS GCA 72 bp | CTCTTGAGGCTGGCTGCCATTTCCGCAAAATGCTCTTaGACGACTCTCATGCAAACCTGCTTGATGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLRLAAISAKCS*TTLMQTCLMCW Trigger: CCAGCACATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGGCAGCCAGCCTCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
||
| CDS GCA 72 bp | ACGCCAACTTGCTCTCTCCCTGCGGAATCCTGGATCTaGCAAATGTTCCAGTGCTTTTCAAGTGTGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPTCSLPAESWI*QMFQCFSSVLP Trigger: TGGAAGCACACTTGAAAAGCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
||
| CDS GCA 72 bp | GTGGCGCTTGTTCTTTCCACGCCAATCATGAGCTTATaGCACCGGGAGTCAAACAAGGACGGCAAATTCAAG | + |
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Preference number: 6 (lower is better) Translates to: VALVLSTPIMSL*HRESNKDGKFK Trigger: CTTGAATTTGCCGTCCTTGTTTGACTCCCGGTGGCATAAGCTCATGATTGGCGTGGAAAGAACAAGCGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS GCA 72 bp | TCTGGTCTCTTGAGGCTGGCTGCCATTTCCGCAAAATaGTCTTGCACGACTCTCATGCAAACCTGCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: SGLLRLAAISAK*SCTTLMQTCLM Trigger: CATCAAGCAGGTTTGCATGAGAGTCGTGCAAGAGCATTTTGCGGAAATGGCAGCCAGCCTCAAGAGACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054588.15 ENSMUST00000088349.3 |
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| CDS GCA 72 bp | TGTGGATCCCACCACCCTCTGGATAGTCCTTCGAGATaGAGCCTTCTCAATTTGGAACTGAGAAATCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CGSHHPLDSPSR*SLLNLELRNQV Trigger: GACCTGATTTCTCAGTTCCAAATTGAGAAGGCTGCATCTCGAAGGACTATCCAGAGGGTGGTGGGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS GCA 72 bp | TTGGCCATTTATCTTCACGCCAACTTGCTCTCTCCCTaGGGAATCCTGGATCTGCCAAATGTTCCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LAIYLHANLLSP*GILDLPNVPVL Trigger: AAGCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAATGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CCA 72 bp | ATCTTCACGCCAACTTGCTCTCTCCCTGCGGAATCCTaGATCTGCCAAATGTTCCAGTGCTTTTCAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: IFTPTCSLPAES*ICQMFQCFSSV Trigger: CACACTTGAAAAGCACTGGAACATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CAA 90 bp | TTTGGAGACTCCCATCCAGTCCCTTGTATGAAAATGCGACAGACTTaGTTTGGCCATTTATCTTCACGCCAACTTGCTCTCTCCCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: FGDSHPVPCMKMRQT*FGHLSSRQLALSLR Trigger: CCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAATGGCCAAACAAAGTCTGTCGCATTTTCATACAAGGGACTGGATGGGAGTCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS GCA 72 bp | ACAGACTTTGTTTGGCCATTTATCTTCACGCCAACTTaGTCTCTCCCTGCGGAATCCTGGATCTGCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: TDFVWPFIFTPT*SLPAESWICQM Trigger: CATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAATGGCCAAACAAAGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CCA 72 bp | TCAAACAAGGACGGCAAATTCAAGAAGGCAGCCGTTTaGAGACTCCCATCCAGTCCCTTGTATGAAAATGCG | + |
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Preference number: 6 (lower is better) Translates to: SNKDGKFKKAAV*RLPSSPLYENA Trigger: CGCATTTTCATACAAGGGACTGGATGGGAGTCTCCAAACGGCTGCCTTCTTGAATTTGCCGTCCTTGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CAA 72 bp | GACAGACTTTGTTTGGCCATTTATCTTCACGCCAACTaGCTCTCTCCCTGCGGAATCCTGGATCTGCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: DRLCLAIYLHAN*LSPCGILDLPN Trigger: ATTTGGCAGATCCAGGATTCCGCAGGGAGAGAGCAAGTTGGCGTGAAGATAAATGGCCAAACAAAGTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS TCA 72 bp | GGCAGCCGTTTGGAGACTCCCATCCAGTCCCTTGTATaGAAATGCGACAGACTTTGTTTGGCCATTTATCTT | + |
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Preference number: 6 (lower is better) Translates to: GSRLETPIQSLV*KCDRLCLAIYL Trigger: AAGATAAATGGCCAAACAAAGTCTGTCGCATTTTCATACAAGGGACTGGATGGGAGTCTCCAAACGGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CAA 90 bp | GAAATCAGGTCAAACCCTGGTAAGTCATCTTGGCCAATCCTGATCTaGGGACACAGTTCACTTCCACCATTAGAAATGGAATTGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EIRSNPGKSSWPILI*GHSSLPPLEMELAG Trigger: TCCTGCCAATTCCATTTCTAATGGTGGAAGTGAACTGTGTCCCAAGATCAGGATTGGCCAAGATGACTTACCAGGGTTTGACCTGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS TCA 72 bp | GCAGTCCACTGGGATACAAATGCCTTGTTGGAATCCTaGAGTCTACATTACTTCCCAGCTTGTAAGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: AVHWDTNALLES*SLHYFPACKPL Trigger: AAGTGGCTTACAAGCTGGGAAGTAATGTAGACTTCAGGATTCCAACAAGGCATTTGTATCCCAGTGGACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS TCA 72 bp | ATCAGCATCCACTGGAGTTCAAAAGGAACAGAAACCTaGGGATTGTCCACAAGTTTTCCCAGCACTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ISIHWSSKGTET*GLSTSFPSTAK Trigger: CTTTGCAGTGCTGGGAAAACTTGTGGACAATCCTCAGGTTTCTGTTCCTTTTGAACTCCAGTGGATGCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS CAA 72 bp | TCCCATCCAGTCCCTTGTATGAAAATGCGACAGACTTaGTTTGGCCATTTATCTTCACGCCAACTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SHPVPCMKMRQT*FGHLSSRQLAL Trigger: GAGAGCAAGTTGGCGTGAAGATAAATGGCCAAACAAAGTCTGTCGCATTTTCATACAAGGGACTGGATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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| CDS TCA 72 bp | ATAGTCCTTCGAGATGCAGCCTTCTCAATTTGGAACTaGGAAATCAGGTCAAACCCTGGTAAGTCATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: IVLRDAAFSIWN*EIRSNPGKSSW Trigger: CCAAGATGACTTACCAGGGTTTGACCTGATTTCTCAGTTCCAAATTGAGAAGGCTGCATCTCGAAGGACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054588.15 |
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