Pregenerated sensors for COL8A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056174Ensembl transcript IDs: ENSMUST00000070132.7, ENSMUST00000128435.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTCCCGGGGAGCTGGAAGAGACCCAGCGAACACAGGAAGCCCTaGGCTCATTCCATGCCATCGAAGGCCAACAGGAAAACCATCTCT | + |
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Preference number: 1 (lower is better) Translates to: RLPGSWKRPSEHRKP*AHSMPSKANRKTIS Trigger: AGAGATGGTTTTCCTGTTGGCCTTCGATGGCATGGAATGAGCCCAGGGCTTCCTGTGTTCGCTGGGTCTCTTCCAGCTCCCCGGGAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 90 bp | TCACTCGGGCAGCTGACTGTGCCCAAATTGGAGCCCAAGCTGGGTTaGCTATTCGATGTCCCAGATTCCCACTTGGTCAGGGAAGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: SLGQLTVPKLEPKLG*LFDVPDSHLVREVG Trigger: GCCCACTTCCCTGACCAAGTGGGAATCTGGGACATCGAATAGGCAACCCAGCTTGGGCTCCAATTTGGGCACAGTCAGCTGCCCGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 90 bp | GACCAGCTTGCCCCTGATCCATGTCCTCTCACGGATCTCCACAGATaGCTGCTTCAGGAGTCTTCCAGAGGCCATACAACTGTCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: DQLAPDPCPLTDLHR*LLQESSRGHTTVPT Trigger: GGTGGGGACAGTTGTATGGCCTCTGGAAGACTCCTGAAGCAGTCATCTGTGGAGATCCGTGAGAGGACATGGATCAGGGGCAAGCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 90 bp | TATGCAAGAATGTCCACCATCCCTACCCCCAGCATTGAGCCCAGCTaGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATCCTGATTAGG | + |
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Preference number: 1 (lower is better) Translates to: YARMSTIPTPSIEPS*EASPPVSCRSILIR Trigger: CCTAATCAGGATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCTGGGGGTAGGGATGGTGGACATTCTTGCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 90 bp | AATCCTTCTCTAAAGGCTTTGGGGTGGGGTCTGGCAGCTCTGCCCTaGACCAGCCTTCAGGGCTCCCTCTGGGAGTTGACTAATCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: NPSLKALGWGLAALP*TSLQGSLWELTNLL Trigger: TAAGAGATTAGTCAACTCCCAGAGGGAGCCCTGAAGGCTGGTTCAGGGCAGAGCTGCCAGACCCCACCCCAAAGCCTTTAGAGAAGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 90 bp | ATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATaGAGACAGCCAGGGAAACGGAAGAGTGACCAGCTTGCCCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: ISAHVSTLILKNQSQ*RQPGKRKSDQLAPD Trigger: ATCAGGGGCAAGCTGGTCACTCTTCCGTTTCCCTGGCTGTCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 90 bp | ACACTACACAGAGTCCCATCTCAGCCCATGTGTCCACCCTCATACTaGAGAACCAGAGCCAATGGAGACAGCCAGGGAAACGGAAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: TLHRVPSQPMCPPSY*RTRANGDSQGNGRV Trigger: CACTCTTCCGTTTCCCTGGCTGTCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGGACTCTGTGTAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 90 bp | CCAAACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTaGTTGATCATCAGTCCTGGTTGGCTCTGCAATCTGTATAGACAC | + |
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Preference number: 1 (lower is better) Translates to: PNPQQVRRKREGHRV*LIISPGWLCNLYRH Trigger: GTGTCTATACAGATTGCAGAGCCAACCAGGACTGATGATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 90 bp | AGGAAATTGGAAGCGGAGGGTGGAGAGGGAGGAAGTGCCCACAGATaGGCCCCTCTAGTAGACACTAAATACCCACAGCATGGTTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: RKLEAEGGEGGSAHR*APLVDTKYPQHGSY Trigger: ATAAGAACCATGCTGTGGGTATTTAGTGTCTACTAGAGGGGCTCATCTGTGGGCACTTCCTCCCTCTCCACCCTCCGCTTCCAATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 90 bp | ACTAATCTCTTACCGCCAGAACCCATTGGATTAGTGGCTTTGACCTaGGGAAGGAGGAGACTGAAAAGGCCCCACAGGGATACTAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: TNLLPPEPIGLVALT*GRRRLKRPHRDTSL Trigger: GAGACTAGTATCCCTGTGGGGCCTTTTCAGTCTCCTCCTTCCCCAGGTCAAAGCCACTAATCCAATGGGTTCTGGCGGTAAGAGATTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 90 bp | TGGTCTGAGCTCACAACATCACTCCAGGCATCTATCCATATGGACTaGCTCTATGGTCCCCATTCCCTTCTTCCTTTCTCCCAACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: WSELTTSLQASIHMD*LYGPHSLLPFSQQE Trigger: TTCCTGTTGGGAGAAAGGAAGAAGGGAATGGGGACCATAGAGGCAGTCCATATGGATAGATGCCTGGAGTGATGTTGTGAGCTCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 90 bp | AGAAAGAGGGAGGGGCATCGTGTTTGCTTGATCATCAGTCCTGGTTaGCTCTGCAATCTGTATAGACACTACACAGAGTCCCATCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: RKREGHRVCLIISPG*LCNLYRHYTESHLS Trigger: GCTGAGATGGGACTCTGTGTAGTGTCTATACAGATTGCAGAGCCAACCAGGACTGATGATCAAGCAAACACGATGCCCCTCCCTCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 90 bp | AATACAAAAATGCACAAGGTAAGTGGAGTTGTCATAGTTAAAGCCTaGCATTGTTTGTCAACGCTGGTCAGTGACATCTACAGCTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: NTKMHKVSGVVIVKA*HCLSTLVSDIYSSN Trigger: ATTGGAGCTGTAGATGTCACTGACCAGCGTTGACAAACAATGTCAGGCTTTAACTATGACAACTCCACTTACCTTGTGCATTTTTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR-3UTR GCA 90 bp | AGGAGACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAAAGTACTCTGGGGTGCTaGCTGCAGACCAGGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RRLGPHPQCVTRAADCAQSTLGC*LQTRQV Trigger: GACCTGCCTGGTCTGCAGGCAGCACCCCAGAGTACT...TTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CAA 90 bp | GCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAAATaGGAGCCCAAGCTGGGTTGCCTATTCGATGTCCCAGATTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: ALILSVSLGQLTVPK*EPKLGCLFDVPDSH Trigger: GTGGGAATCTGGGACATCGAATAGGCAACCCAGCTTGGGCTCCAATTTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAACCCTGTTCAGCTTTTTaGTTCTTTCCTTCCGATGGA | + |
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Preference number: 2 (lower is better) Translates to: RRLGPHPQCVTRAADCAQPCSAF*FFPSDG Trigger: TCCATCGGAAGGAAAGAACCAAAAAGCTGAACAGGG...TTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGTCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTGACATCTACAGCTCCAATCCACAGACGTTTCAGAATCCTTCTCTAAAGAGGCTCCCGGGGAGCTaGAAGAGACCCAGCGAACAC | + |
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Preference number: 2 (lower is better) Translates to: VSDIYSSNPQTFQNPSLKRLPGS*KRPSEH Trigger: GTGTTCGCTGGGTCTCTTCCAGCTCCCCGGGAGCCT...CTTTAGAGAAGGATTCTGAAACGTCTGTGGATTGGAGCTGTAGATGTCACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CAA 90 bp | AACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTaGATCATCAGTCCTGGTTGGCTCTGCAATCTGTATAGACACTAC | + |
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Preference number: 2 (lower is better) Translates to: NPQQVRRKREGHRVC*IISPGWLCNLYRHY Trigger: GTAGTGTCTATACAGATTGCAGAGCCAACCAGGACTGATGATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTGACATCTACAGCTCCAATCCACAGACGTTTCAGAATCCTTCTCTAAAGATCATCAGTCCTGGTTaGCTCTGCAATCTGTATAGA | + |
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Preference number: 2 (lower is better) Translates to: VSDIYSSNPQTFQNPSLKIISPG*LCNLYR Trigger: TCTATACAGATTGCAGAGCCAACCAGGACTGATGAT...CTTTAGAGAAGGATTCTGAAACGTCTGTGGATTGGAGCTGTAGATGTCACTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 72 bp | GGACTCATGAGGGGGCCCAGGCTGAGTACTCTGGGGTaGTGCCTGCAGACCAGGCAGGTCCAGAACAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GLMRGPRLSTLG*CLQTRQVQNRG Trigger: CCCTCTGTTCTGGACCTGCCTGGTCTGCAGGCAGCACCCCAGAGTACTCAGCCTGGGCCCCCTCATGAGTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 72 bp | CTCATGAGGGGGCCCAGGCTGAGTACTCTGGGGTGCTaGCTGCAGACCAGGCAGGTCCAGAACAGAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: LMRGPRLSTLGC*LQTRQVQNRGT Trigger: TGTCCCTCTGTTCTGGACCTGCCTGGTCTGCAGGCAGCACCCCAGAGTACTCAGCCTGGGCCCCCTCATGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 72 bp | CTAAAGGCTTTGGGGTGGGGTCTGGCAGCTCTGCCCTaGACCAGCCTTCAGGGCTCCCTCTGGGAGTTGACT | + |
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Preference number: 3 (lower is better) Translates to: LKALGWGLAALP*TSLQGSLWELT Trigger: AGTCAACTCCCAGAGGGAGCCCTGAAGGCTGGTTCAGGGCAGAGCTGCCAGACCCCACCCCAAAGCCTTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | ATGTCCACCATCCCTACCCCCAGCATTGAGCCCAGCTaGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATC | + |
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Preference number: 3 (lower is better) Translates to: MSTIPTPSIEPS*EASPPVSCRSI Trigger: GATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCTGGGGGTAGGGATGGTGGACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 72 bp | ACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTaGCTGTGCCCAAATTGGAGCCCAAGCTGGGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: TRPSSSVCHSGS*LCPNWSPSWVA Trigger: GGCAACCCAGCTTGGGCTCCAATTTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 72 bp | GTGAGCAGTCCACTAGGCTGCCTTGCAGTTGCAGGCTaGGGGAAGGAGACTAGGCCCTCATCCTCAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VSSPLGCLAVAG*GKETRPSSSVC Trigger: ACACACTGAGGATGAGGGCCTAGTCTCCTTCCCGCAGCCTGCAACTGCAAGGCAGCCTAGTGGACTGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | GGGAGCTGGAAGAGACCCAGCGAACACAGGAAGCCCTaGGCTCATTCCATGCCATCGAAGGCCAACAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: GSWKRPSEHRKP*AHSMPSKANRK Trigger: TTTCCTGTTGGCCTTCGATGGCATGGAATGAGCCCAGGGCTTCCTGTGTTCGCTGGGTCTCTTCCAGCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR-3UTR CAA 90 bp | TGCTGTCTCAGGCAGATTCCCCCTTTGGAAACTGAAGTGAGCAGTCCACTAGGCTCCCTACCCCCAGCATaGAGCCCAGCTGGGAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: CCLRQIPPLETEVSSPLGSLPPA*SPAGKQ Trigger: TTGCTTCCCAGCTGGGCTCAATGCTGGGGGTAGGGA...GCCTAGTGGACTGCTCACTTCAGTTTCCAAAGGGGGAATCTGCCTGAGACAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 72 bp | GAAGCGGAGGGTGGAGAGGGAGGAAGTGCCCACAGATaGGCCCCTCTAGTAGACACTAAATACCCACAGCAT | + |
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Preference number: 3 (lower is better) Translates to: EAEGGEGGSAHR*APLVDTKYPQH Trigger: ATGCTGTGGGTATTTAGTGTCTACTAGAGGGGCTCATCTGTGGGCACTTCCTCCCTCTCCACCCTCCGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 72 bp | CAGCTGACTGTGCCCAAATTGGAGCCCAAGCTGGGTTaGCTATTCGATGTCCCAGATTCCCACTTGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: QLTVPKLEPKLG*LFDVPDSHLVR Trigger: CCTGACCAAGTGGGAATCTGGGACATCGAATAGGCAACCCAGCTTGGGCTCCAATTTGGGCACAGTCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 72 bp | TCCTTGCTGTCTCAGGCAGATTCCCCCTTTGGAAACTaGAGTGAGCAGTCCACTAGGCTGCCTTGCAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: SLLSQADSPFGN*SEQSTRLPCSC Trigger: GCAACTGCAAGGCAGCCTAGTGGACTGCTCACTTCAGTTTCCAAAGGGGGAATCTGCCTGAGACAGCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | GTCTTCCAGAGGCCATACAACTGTCCCCACCAGGACTaGTCTGAGCTCACAACATCACTCCAGGCATCTATC | + |
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Preference number: 3 (lower is better) Translates to: VFQRPYNCPHQD*SELTTSLQASI Trigger: GATAGATGCCTGGAGTGATGTTGTGAGCTCAGACCAGTCCTGGTGGGGACAGTTGTATGGCCTCTGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | TTACCGCCAGAACCCATTGGATTAGTGGCTTTGACCTaGGGAAGGAGGAGACTGAAAAGGCCCCACAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LPPEPIGLVALT*GRRRLKRPHRD Trigger: ATCCCTGTGGGGCCTTTTCAGTCTCCTCCTTCCCCAGGTCAAAGCCACTAATCCAATGGGTTCTGGCGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 72 bp | CCAGAGGCCATACAACTGTCCCCACCAGGACTGGTCTaGGCTCACAACATCACTCCAGGCATCTATCCATAT | + |
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Preference number: 3 (lower is better) Translates to: PEAIQLSPPGLV*AHNITPGIYPY Trigger: ATATGGATAGATGCCTGGAGTGATGTTGTGAGCTCAGACCAGTCCTGGTGGGGACAGTTGTATGGCCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 72 bp | CAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTaGTTGATCATCAGTCCTGGTTGGCTCTGCAATCTG | + |
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Preference number: 3 (lower is better) Translates to: QQVRRKREGHRV*LIISPGWLCNL Trigger: CAGATTGCAGAGCCAACCAGGACTGATGATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 72 bp | CTTTCTTTCAGAGCCTTAGCCTCCTGGGCCCTCCACTaGTTAAAACAGGAAATTGGAAGCGGAGGGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LSFRALASWALH*LKQEIGSGGWR Trigger: TCTCCACCCTCCGCTTCCAATTTCCTGTTTTAAGCAGTGGAGGGCCCAGGAGGCTAAGGCTCTGAAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | CAAGAAGAAGGCCGCCGCTGCCCCTGTTCAGCTTTTTaGTTCTTTCCTTCCGATGGAAATCTCTGTAACTGG | + |
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Preference number: 3 (lower is better) Translates to: QEEGRRCPCSAF*FFPSDGNLCNW Trigger: CCAGTTACAGAGATTTCCATCGGAAGGAAAGAACCAAAAAGCTGAACAGGGGCAGCGGCGGCCTTCTTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR GCA 72 bp | CTCACAACATCACTCCAGGCATCTATCCATATGGACTaGCTCTATGGTCCCCATTCCCTTCTTCCTTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LTTSLQASIHMD*LYGPHSLLPFS Trigger: GGAGAAAGGAAGAAGGGAATGGGGACCATAGAGGCAGTCCATATGGATAGATGCCTGGAGTGATGTTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | CTGAGCTCACAACATCACTCCAGGCATCTATCCATATaGACTGCCTCTATGGTCCCCATTCCCTTCTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LSSQHHSRHLSI*TASMVPIPFFL Trigger: AAGGAAGAAGGGAATGGGGACCATAGAGGCAGTCCATATGGATAGATGCCTGGAGTGATGTTGTGAGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | GAGGGGCATCGTGTTTGCTTGATCATCAGTCCTGGTTaGCTCTGCAATCTGTATAGACACTACACAGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: EGHRVCLIISPG*LCNLYRHYTES Trigger: GGACTCTGTGTAGTGTCTATACAGATTGCAGAGCCAACCAGGACTGATGATCAAGCAAACACGATGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CCA 72 bp | TTTTGGTTCTTTCCTTCCGATGGAAATCTCTGTAACTaGAAAGGTCTCTCTATCGCTAAAGAGGAGGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: FWFFPSDGNLCN*KGLSIAKEEEA Trigger: GGCCTCCTCCTCTTTAGCGATAGAGAGACCTTTCCAGTTACAGAGATTTCCATCGGAAGGAAAGAACCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 72 bp | ATGCACAAGGTAAGTGGAGTTGTCATAGTTAAAGCCTaGCATTGTTTGTCAACGCTGGTCAGTGACATCTAC | + |
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Preference number: 3 (lower is better) Translates to: MHKVSGVVIVKA*HCLSTLVSDIY Trigger: GTAGATGTCACTGACCAGCGTTGACAAACAATGTCAGGCTTTAACTATGACAACTCCACTTACCTTGTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR TCA 72 bp | TCTGATTCCCGGTGCATTTTTCCTGAACCTGATATGTaGTATGTGGTAAGTAGAGAGGAACTTCCTGTACCA | + |
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Preference number: 3 (lower is better) Translates to: SDSRCIFPEPDM*YVVSREELPVP Trigger: TGGTACAGGAAGTTCCTCTCTACTTACCACATATCACATATCAGGTTCAGGAAAAATGCACCGGGAATCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | GCAGCTTCCAGGACTCATGAGGGGGCCCAGGCTGAGTACTCTGGGGTGCTGCCTGGGGCCAGCAGGGCCTaGCTGTCCATGAACCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AASRTHEGAQAEYSGVLPGASRA*LSMNPR Trigger: CCTGGGGTTCATGGACAGCCAGGCCCTGCTGGCCCC...AGGCAGCACCCCAGAGTACTCAGCCTGGGCCCCCTCATGAGTCCTGGAAGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | AGCATTGAGCCCAGCTGGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATCCTGCCCCTCAAGCCAGGCTaGCCAGGAAGCCCCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SIEPSWEASPPVSCRSILPLKPG*PGSPKS Trigger: TGACTTGGGGCTTCCTGGGCAGCCTGGCTTGAGGGG...CAGGATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CCCATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATGGAGAGGCTCCTGCCACCCCTaGCCCTCCAGGGCGACCTGT | + |
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Preference number: 4 (lower is better) Translates to: PISAHVSTLILKNQSQWRGSCHP*PSRATC Trigger: ACAGGTCGCCCTGGAGGGCCAGGGGTGGCAGGAGCC...TCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AGGAGACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAATCATTGGGCCGCAGCTaGAGCACAGCCCCTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: RRLGPHPQCVTRAADCAQSLGRS*STAPPE Trigger: TTCGGGAGGGGCTGTGCTCCAGCTGCGGCCCAATGA...TTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR TCA 90 bp | AGCATTGAGCCCAGCTGGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATCCTGACCATTGGCCTGATCTaGGGGCATCTGCACCCACAC | + |
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Preference number: 4 (lower is better) Translates to: SIEPSWEASPPVSCRSILTIGLI*GHLHPH Trigger: GTGTGGGTGCAGATGCCCTCAGATCAGGCCAATGGT...CAGGATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | ACCAGAGAAGGCAGCCATCCCTACATATGCAAGAATGTCCACCATCCCTACCCCCCCTGGCACCCCTGCTaGCCCTGGTATCCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: TREGSHPYICKNVHHPYPPWHPC*PWYPHT Trigger: GGTGTGGGGATACCAGGGGCAGCAGGGGTGCCAGGG...GGGGTAGGGATGGTGGACATTCTTGCATATGTAGGGATGGCTGCCTTCTCTGGT 60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AACACAGGAAGCCCTGGGCTCATTCCATGCCATCGAAGGCCAACAGGAAAACCAGGCCCTGGAGCCCCCTaGGCACCTGGTTTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTGSPGLIPCHRRPTGKPGPGAP*APGFPG Trigger: CCCTGGAAAACCAGGTGCCCAGGGGGCTCCAGGGCC...TGGTTTTCCTGTTGGCCTTCGATGGCATGGAATGAGCCCAGGGCTTCCTGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | GCAGCTTCCAGGACTCATGAGGGGGCCCAGGCTGAGTACTCTGGGGTGCTGCCTTATCCCATCCAAACCTaGTTTGCCCAAGCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AASRTHEGAQAEYSGVLPYPIQT*FAQASW Trigger: CCAGCTGGCTTGGGCAAACCAGGTTTGGATGGGATA...AGGCAGCACCCCAGAGTACTCAGCCTGGGCCCCCTCATGAGTCCTGGAAGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AATGGAGACAGCCAGGGAAACGGAAGAGTGACCAGCTTGCCCCTGATCCATGTCCCCAGGAAGGCCAGGTaGACCCCCAAGTCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGDSQGNGRVTSLPLIHVPRKAR*TPKSLW Trigger: CCACAGGGACTTGGGGGTCCACCTGGCCTTCCTGGG...GACATGGATCAGGGGCAAGCTGGTCACTCTTCCGTTTCCCTGGCTGTCTCCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CCCAAACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTTGATCCCAATAGGGCCAGCTaGGCCCTGGAGCCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKPPAGEKKEGGASCLLDPNRAS*ALEPWD Trigger: ATCCCAGGGCTCCAGGGCCCAGCTGGCCCTATTGGG...ATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTTTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AGGAGACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAACCTCCACGCCACCATTaGGCAGATGCAAGCCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRLGPHPQCVTRAADCAQPPRHH*ADASLR Trigger: TCGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGG...TTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTCAGGCAGATTCCCCCTTTGGAAACTGAAGTGAGCAGTCCACTAGGCCTGGTGGTCCAACCTTaGCTGGGAGCCCTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CCLRQIPPLETEVSSPLGLVVQP*LGALGD Trigger: GTCCCCCAGGGCTCCCAGGCAAGGTTGGACCACCAG...GCCTAGTGGACTGCTCACTTCAGTTTCCAAAGGGGGAATCTGCCTGAGACAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CCCAAACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTTGATCTTGCCTGGGAGCCCTaGGGGACCAGCTTTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKPPAGEKKEGGASCLLDLAWEP*GTSFAH Trigger: ATGGGCAAAGCTGGTCCCCCAGGGCTCCCAGGCAAG...ATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | TCCAGAGGCCATACAACTGTCCCCACCAGGACTGGTCTGAGCTCACAACATCACAGGACCTGTGAGTCCTaGGGAGCCAGGGACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGHTTVPTRTGLSSQHHRTCES*GARDSR Trigger: CCTGGAGTCCCTGGCTCCCCAGGACTCACAGGTCCT...GTGATGTTGTGAGCTCAGACCAGTCCTGGTGGGGACAGTTGTATGGCCTCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR TCA 90 bp | TCCAGAGGCCATACAACTGTCCCCACCAGGACTGGTCTGAGCTCACAACATCACGGGCCTGGCTGTCCATaGACCCCAGGTTTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGHTTVPTRTGLSSQHHGPGCP*TPGFPV Trigger: CACTGGAAAACCTGGGGTTCATGGACAGCCAGGCCC...GTGATGTTGTGAGCTCAGACCAGTCCTGGTGGGGACAGTTGTATGGCCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR TCA 90 bp | TGCTGTCTCAGGCAGATTCCCCCTTTGGAAACTGAAGTGAGCAGTCCACTAGGCCCTAACCGGCATGCCTaGGGCAGGGAAGGGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCLRQIPPLETEVSSPLGPNRHA*GREGGS Trigger: ACTTCCCCCTTCCCTGCCTCAGGCATGCCGGTTAGG...GCCTAGTGGACTGCTCACTTCAGTTTCCAAAGGGGGAATCTGCCTGAGACAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR GCA 90 bp | AGCATTGAGCCCAGCTGGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATCCTGCCTTTCTGCATGGGCTaGACATACTTTACCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIEPSWEASPPVSCRSILPFCMG*TYFTGA Trigger: TGCCCCGGTAAAGTATGTGCAGCCCATGCAGAAAGG...CAGGATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AGGAGACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAAAGCCCCCTGGGCACCTaGTTTTCCAGGGACAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLGPHPQCVTRAADCAQSPLGT*FSRDSN Trigger: ATTACTGTCCCTGGAAAACCAGGTGCCCAGGGGGCT...TTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | TGCTGTCTCAGGCAGATTCCCCCTTTGGAAACTGAAGTGAGCAGTCCACTAGGCACCCCCAAGTCCCTGTaGACCCTGCTCCCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCLRQIPPLETEVSSPLGTPKSL*TLLPWL Trigger: AAGCCAGGGGAGCAGGGTCCACAGGGACTTGGGGGT...GCCTAGTGGACTGCTCACTTCAGTTTCCAAAGGGGGAATCTGCCTGAGACAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AATGGAGACAGCCAGGGAAACGGAAGAGTGACCAGCTTGCCCCTGATCCATGTCAATGCCAGGCACTCCTaGGGGACCTCCAGGTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NGDSQGNGRVTSLPLIHVNARHS*GTSRSY Trigger: GTAGGACCTGGAGGTCCCCCAGGAGTGCCTGGCATT...GACATGGATCAGGGGCAAGCTGGTCACTCTTCCGTTTCCCTGGCTGTCTCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | ACCAGAGAAGGCAGCCATCCCTACATATGCAAGAATGTCCACCATCCCTACCCCCTCTCCAGGAGGCCCTaGAAGGCCCGGTTCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TREGSHPYICKNVHHPYPLSRRP*KARFTL Trigger: AAGGGTGAACCGGGCCTTCCAGGGCCTCCTGGAGAG...GGGGTAGGGATGGTGGACATTCTTGCATATGTAGGGATGGCTGCCTTCTCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CAA 72 bp | CCTGTGTTCAGAGGGCCTAGCGAGAGGCTCTCTGCCTaGAAGACACTTAGTTTGGGGTTGCCAAGCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVFRGPSERLSA*KTLSLGLPSLP Trigger: GGGGAGGCTTGGCAACCCCAAACTAAGTGTCTTCAAGGCAGAGAGCCTCTCGCTAGGCCCTCTGAACACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | TTGCCCCTGATCCATGTCCTCTCACGGATCTCCACAGATGACTGCTTCAGGAGTCTTGGTCTCCTCGAATaGCAGGCACTCCTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLIHVLSRISTDDCFRSLGLLE*QALLGD Trigger: GTCCCCCAGGAGTGCCTGGCATTCGAGGAGACCAAG...ACTCCTGAAGCAGTCATCTGTGGAGATCCGTGAGAGGACATGGATCAGGGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | ACCAGAGAAGGCAGCCATCCCTACATATGCAAGAATGTCCACCATCCCTACCCCTCCTTTAGCCCCTACTaGACCCTGTGGCCCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TREGSHPYICKNVHHPYPSFSPY*TLWPWH Trigger: GTGCCAGGGCCACAGGGTCCAGTAGGGGCTAAAGGA...GGGGTAGGGATGGTGGACATTCTTGCATATGTAGGGATGGCTGCCTTCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CCCAAACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTTGATAGGCCATTAGGCCCTTaGTCTCCTCGAATGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPPAGEKKEGGASCLLDRPLGP*SPRMPG Trigger: GCCTGGCATTCGAGGAGACCAAGGGCCTAATGGCCT...ATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | ACCAGAGAAGGCAGCCATCCCTACATATGCAAGAATGTCCACCATCCCTACCCCGAAGATGCCAGTGGCTaGGTTGTAGCCGCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TREGSHPYICKNVHHPYPEDASG*VVAAVA Trigger: GGCCACAGCGGCTACAACCCAGCCACTGGCATCTTC...GGGGTAGGGATGGTGGACATTCTTGCATATGTAGGGATGGCTGCCTTCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CAA 72 bp | CTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAAATaGGAGCCCAAGCTGGGTTGCCTATTCGATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVSLGQLTVPK*EPKLGCLFDVP Trigger: TGGGACATCGAATAGGCAACCCAGCTTGGGCTCCAATTTGGGCACAGTCAGCTGCCCGAGTGACACACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | ACCAGAGAAGGCAGCCATCCCTACATATGCAAGAATGTCCACCATCCCTACCCCCATCCAAACCTGGTTTaGCCAAGCCAGCTGGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TREGSHPYICKNVHHPYPHPNLV*PSQLDR Trigger: CCGGTCCAGCTGGCTTGGGCAAACCAGGTTTGGATG...GGGGTAGGGATGGTGGACATTCTTGCATATGTAGGGATGGCTGCCTTCTCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | CCCATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATGGAGAGTGGCTTGCCTCCTTTaGCCAGTACAGCTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PISAHVSTLILKNQSQWRVACLL*PVQLPP Trigger: TGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCAC...TCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | CCCATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATGGAGAGGGGGAAGTGAGCACTaGAGTAAAGGCTGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PISAHVSTLILKNQSQWRGGSEH*SKGWSG Trigger: GCCACTCCAGCCTTTACTGCAGTGCTCACTTCCCCC...TCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | AGCATTGAGCCCAGCTGGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATCCTGGACATGCACATGGTATaGAAAGTAGTAGACCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIEPSWEASPPVSCRSILDMHMV*KVVDPS Trigger: GGAGGGGTCTACTACTTTGCATACCATGTGCATGTC...CAGGATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CAGAAACAACTTCAGCCTACAGAAAGCAGGTCAGTCTTCTCGGGGCAAGAAGAATGGTCCAACCTTGCCTaGGAGCCCTGGGGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKQLQPTESRSVFSGQEEWSNLA*EPWGTS Trigger: GCTGGTCCCCCAGGGCTCCCAGGCAAGGTTGGACCA...TTCTTCTTGCCCCGAGAAGACTGACCTGCTTTCTGTAGGCTGAAGTTGTTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | TTTCCTTCCGATGGAAATCTCTGTAACTGGAAAGGTCTCTCTATCGCTAAAGAGGGCCCCCGGAGGCCCTaGTCCCCTCGTATCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSDGNLCNWKGLSIAKEGPRRP*SPRIPG Trigger: GCCAGGGATACGAGGGGACCAGGGCCTCCGGGGGCC...CTCTTTAGCGATAGAGAGACCTTTCCAGTTACAGAGATTTCCATCGGAAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CCCATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATGGAGAACCGAGCCCAAACTGTaGCTTGCCTCCTTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PISAHVSTLILKNQSQWRTEPKL*LASFAQ Trigger: CTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGT...TCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | TCCAGAGGCCATACAACTGTCCCCACCAGGACTGGTCTGAGCTCACAACATCACCCCACGGGTCCTTTCTaGATGGGCTGCACATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGHTTVPTRTGLSSQHHPTGPF*MGCTYF Trigger: AAAGTATGTGCAGCCCATGCAGAAAGGACCCGTGGG...GTGATGTTGTGAGCTCAGACCAGTCCTGGTGGGGACAGTTGTATGGCCTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | TGCTGTCTCAGGCAGATTCCCCCTTTGGAAACTGAAGTGAGCAGTCCACTAGGCGGGCAGATGCAAGCCTaGGATACCAGTCTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCLRQIPPLETEVSSPLGGQMQA*DTSLIQ Trigger: CTGGATGAGACTGGTATCGCAGGCTTGCATCTGCCC...GCCTAGTGGACTGCTCACTTCAGTTTCCAAAGGGGGAATCTGCCTGAGACAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | AACACAGGAAGCCCTGGGCTCATTCCATGCCATCGAAGGCCAACAGGAAAACCACCACCATTGGGCAGATaGAAGCCTGCGATACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NTGSPGLIPCHRRPTGKPPPLGR*KPAIPV Trigger: GACTGGTATCGCAGGCTTGCATCTGCCCAATGGTGG...TGGTTTTCCTGTTGGCCTTCGATGGCATGGAATGAGCCCAGGGCTTCCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR GCA 90 bp | TTGCCCCTGATCCATGTCCTCTCACGGATCTCCACAGATGACTGCTTCAGGAGTGCCCAAACTGTGGCTTaGCTCCTTTGCCCAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLIHVLSRISTDDCFRSAQTVA*LLCPVQ Trigger: CTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGC...ACTCCTGAAGCAGTCATCTGTGGAGATCCGTGAGAGGACATGGATCAGGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | GTCAGTGACATCTACAGCTCCAATCCACAGACGTTTCAGAATCCTTCTCTAAAGCCCTACTGGACCCTGTaGCCCTGGCACCCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSDIYSSNPQTFQNPSLKPYWTL*PWHPCC Trigger: GCAGCAGGGGTGCCAGGGCCACAGGGTCCAGTAGGG...CTTTAGAGAAGGATTCTGAAACGTCTGTGGATTGGAGCTGTAGATGTCACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AGGAGACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAAAATGGATGTACTCGGTaGAGTAGAGACCATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLGPHPQCVTRAADCAQNGCTR*SRDHWP Trigger: AGGCCAATGGTCTCTACTCCACCGAGTACATCCATT...TTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CCCATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATGGAGAAGGTTTTCCAGTGCCTaGTTTTCCTGGGAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PISAHVSTLILKNQSQWRRFSSA*FSWEAR Trigger: CCTGGCTTCCCAGGAAAACCAGGCACTGGAAAACCT...TCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AATGGAGACAGCCAGGGAAACGGAAGAGTGACCAGCTTGCCCCTGATCCATGTCGTCTCCCTTAGGTCCTaGTTTTCCTGGCATCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: NGDSQGNGRVTSLPLIHVVSLRS*FSWHPI Trigger: TATGGGATGCCAGGAAAACCAGGACCTAAGGGAGAC...GACATGGATCAGGGGCAAGCTGGTCACTCTTCCGTTTCCCTGGCTGTCTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| 3UTR CAA 72 bp | CCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTaGCTTGATCATCAGTCCTGGTTGGCTCTGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGEKKEGGASC*LDHQSWLALQS Trigger: AGATTGCAGAGCCAACCAGGACTGATGATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR TCA 90 bp | CAGAAACAACTTCAGCCTACAGAAAGCAGGTCAGTCTTCTCGGGGCAAGAAGAACTCCATTATCCCCTTTaGGGCCCCTATCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKQLQPTESRSVFSGQEELHYPL*GPYLLG Trigger: CCCGAGGAGATAGGGGCCTCAAAGGGGATAATGGAG...TTCTTCTTGCCCCGAGAAGACTGACCTGCTTTCTGTAGGCTGAAGTTGTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | CAGAAACAACTTCAGCCTACAGAAAGCAGGTCAGTCTTCTCGGGGCAAGAAGAATTCACCCTTCAGGCCTaGCAGACCCTGAGGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKQLQPTESRSVFSGQEEFTLQA*QTLRPN Trigger: ATTGGGCCTCAGGGTCTGCCAGGCCTGAAGGGTGAA...TTCTTCTTGCCCCGAGAAGACTGACCTGCTTTCTGTAGGCTGAAGTTGTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CCA 90 bp | AACACAGGAAGCCCTGGGCTCATTCCATGCCATCGAAGGCCAACAGGAAAACCATGGAGTAGAGACCATTaGCCTGATCTGAGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGSPGLIPCHRRPTGKPWSRDH*PDLRAS Trigger: AGATGCCCTCAGATCAGGCCAATGGTCTCTACTCCA...TGGTTTTCCTGTTGGCCTTCGATGGCATGGAATGAGCCCAGGGCTTCCTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGAAGGCAGCCATCCCTACATATGCAAGAATGTCCACCATCCCTACCCCACACATTGGTGCCCTTaGCATGCACATGGTATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TREGSHPYICKNVHHPYPTHWCP*HAHGMQ Trigger: TTGCATACCATGTGCATGTCAAGGGCACCAATGTGT...GGGGTAGGGATGGTGGACATTCTTGCATATGTAGGGATGGCTGCCTTCTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGACATCTACAGCTCCAATCCACAGACGTTTCAGAATCCTTCTCTAAAGCTGGGGGACCAGCTTTaGCCATTCGGGAGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSDIYSSNPQTFQNPSLKLGDQL*PFGRSQ Trigger: CTGGCTTCTCCCGAATGGGCAAAGCTGGTCCCCCAG...CTTTAGAGAAGGATTCTGAAACGTCTGTGGATTGGAGCTGTAGATGTCACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR CCA 90 bp | GTCAGTGACATCTACAGCTCCAATCCACAGACGTTTCAGAATCCTTCTCTAAAGTGGACCCACAGCTCCTaGCTCTCCCCTAGAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDIYSSNPQTFQNPSLKWTHSS*LSPRTW Trigger: CCAGGTTCTAGGGGAGAGCCAGGAGCTGTGGGTCCA...CTTTAGAGAAGGATTCTGAAACGTCTGTGGATTGGAGCTGTAGATGTCACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCAACAGGAAACAAAAACCTCAGAGAACCTAATGTCGTATCAGATGCTGATCTGCACCCACACCTaGTCATTGGGCCGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQQETKTSENLMSYQMLICTHT*SLGRSW Trigger: CCAGCTGCGGCCCAATGACCAGGTGTGGGTGCAGAT...CAGCATCTGATACGACATTAGGTTCTCTGAGGTTTTTGTTTCCTGTTGGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| 3UTR CAA 72 bp | CAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTaGATCATCAGTCCTGGTTGGCTCTGCAATCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QVRRKREGHRVC*IISPGWLCNLY Trigger: ATACAGATTGCAGAGCCAACCAGGACTGATGATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTCCGATGGAAATCTCTGTAACTGGAAAGGTCTCTCTATCGCTAAAGAGAGGGACAGTAATACCTaGGGGACCAGGAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSDGNLCNWKGLSIAKERDSNT*GTRKAR Trigger: CCTGGCCTTCCTGGTCCCTCAGGTATTACTGTCCCT...CTCTTTAGCGATAGAGAGACCTTTCCAGTTACAGAGATTTCCATCGGAAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCAACAGGAAACAAAAACCTCAGAGAACCTAATGTCGTATCAGATGCTGCCAAGTACTGGCCTTTaGCCTCTCGGAAAGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSQQETKTSENLMSYQMLPSTGL*PLGKAV Trigger: GACCGCCTTTCCGAGAGGGCAAAGGCCAGTACTTGG...CAGCATCTGATACGACATTAGGTTCTCTGAGGTTTTTGTTTCCTGTTGGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS TCA 90 bp | AATGCCAGGCACTCCTGGGGGACCTCCAGGTCCTACCTCTCCCTTTaGCCCAGGGGGCCCACGTCTACCAGGAAGCCCTGCAGACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NARHSWGTSRSYLSL*PRGPTSTRKPCRPR Trigger: CCTGGGTCTGCAGGGCTTCCTGGTAGACGTGGGCCCCCTGGGTCAAAGGGAGAGGTAGGACCTGGAGGTCCCCCAGGAGTGCCTGGCATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 90 bp | CTCTCACCAGGGAGCCCAGGCTTCCCAGCCAGGCCATTAGGCCCTTaGTCTCCTCGAATGCCAGGCACTCCTGGGGGACCTCCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LSPGSPGFPARPLGP*SPRMPGTPGGPPGP Trigger: AGGACCTGGAGGTCCCCCAGGAGTGCCTGGCATTCGAGGAGACCAAGGGCCTAATGGCCTGGCTGGGAAGCCTGGGCTCCCTGGTGAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 90 bp | TCCTTTCTGCATGGGCTGCACATACTTTACCGGGGCATAGCCCGCTaGACCCCCAGCTCCGCCGCCAGAGGACACTCTTGGCCCACACCC | + |
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Preference number: 5 (lower is better) Translates to: SFLHGLHILYRGIAR*TPSSAARGHSWPTP Trigger: GGGTGTGGGCCAAGAGTGTCCTCTGGCGGCGGAGCTGGGGGTGCAGCGGGCTATGCCCCGGTAAAGTATGTGCAGCCCATGCAGAAAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070132.7 ENSMUST00000128435.2 |
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| CDS CCA 90 bp | GGCCTTTGCCCTCTCGGAAAGGCGGTCCCACGGGTCCTTTCTGCATaGGCTGCACATACTTTACCGGGGCATAGCCCGCTGCACCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GLCPLGKAVPRVLSA*AAHTLPGHSPLHPQ Trigger: CTGGGGGTGCAGCGGGCTATGCCCCGGTAAAGTATGTGCAGCCCATGCAGAAAGGACCCGTGGGACCGCCTTTCCGAGAGGGCAAAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 90 bp | CCTCCTTTGCCCAGTACAGCTCCCTCCACGCCACCATTGGGCAGATaGAAGCCTGCGATACCAGTCTCATCCAGGGCTCCGGGGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: PPLPSTAPSTPPLGR*KPAIPVSSRAPGAP Trigger: TGGTGCCCCCGGAGCCCTGGATGAGACTGGTATCGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 90 bp | CTGGAGTGGCGTGGGCTGACAGCTCACCGAGCCCAAACTGTGGCTTaGCTCCTTTGCCCAGTACAGCTCCCTCCACGCCACCATTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LEWRGLTAHRAQTVA*LLCPVQLPPRHHWA Trigger: TGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGTCAGCCCACGCCACTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 90 bp | AGAATCACCTTTGTCTCCTGGGGCTCCTGGTATCCCATCCAAACCTaGTTTGCCCAAGCCAGCTGGACCGGGCAGCCCAGGGGGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RITFVSWGSWYPIQT*FAQASWTGQPRGPR Trigger: CCTGGGCCCCCTGGGCTGCCCGGTCCAGCTGGCTTGGGCAAACCAGGTTTGGATGGGATACCAGGAGCCCCAGGAGACAAAGGTGATTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 90 bp | CGTGGGCTGACAGCTCACCGAGCCCAAACTGTGGCTTGCCTCCTTTaGCCAGTACAGCTCCCTCCACGCCACCATTGGGCAGATGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: RGLTAHRAQTVACLL*PVQLPPRHHWADAS Trigger: GCTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGTCAGCCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 90 bp | GTGGCTTGCCTCCTTTGCCCAGTACAGCTCCCTCCACGCCACCATTaGGCAGATGCAAGCCTGCGATACCAGTCTCATCCAGGGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: VACLLCPVQLPPRHH*ADASLRYQSHPGLR Trigger: CCGGAGCCCTGGATGAGACTGGTATCGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | AGCATTGAGCCCAGCTGGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATCCTGCCTGGGGGACCAGCTTaGCCCATTCGGGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SIEPSWEASPPVSCRSILPGGPA*PIREKP Trigger: TGGCTTCTCCCGAATGGGCAAAGCTGGTCCCCCAGG...CAGGATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | CCCAAACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTTGATCCTGGTGGTCCAACCTaGCCTGGGAGCCCTGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: PKPPAGEKKEGGASCLLDPGGPT*PGSPGG Trigger: TCCCCCAGGGCTCCCAGGCAAGGTTGGACCACCAGG...ATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | AGCATTGAGCCCAGCTGGGAAGCAAGCCCGCCTGTTTCCTGCAGGAGCATCCTGGGGCCAGAATCACCTTaGTCTCCTGGGGCTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SIEPSWEASPPVSCRSILGPESP*SPGAPG Trigger: ACCAGGAGCCCCAGGAGACAAAGGTGATTCTGGCCC...CAGGATGCTCCTGCAGGAAACAGGCGGGCTTGCTTCCCAGCTGGGCTCAATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | AGGAGACTAGGCCCTCATCCTCAGTGTGTCACTCGGGCAGCTGACTGTGCCCAACCATCCAAACCTGGTTaGCCCAAGCCAGCTGGACCG | + |
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Preference number: 5 (lower is better) Translates to: RRLGPHPQCVTRAADCAQPSKPG*PKPAGP Trigger: CGGTCCAGCTGGCTTGGGCAAACCAGGTTTGGATGG...TTGGGCACAGTCAGCTGCCCGAGTGACACACTGAGGATGAGGGCCTAGTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | TCCAGAGGCCATACAACTGTCCCCACCAGGACTGGTCTGAGCTCACAACATCACCGCCAGAGGACACTCTaGGCCCACACCCCAACAGCA | + |
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Preference number: 5 (lower is better) Translates to: SRGHTTVPTRTGLSSQHHRQRTL*AHTPTA Trigger: TGCTGTTGGGGTGTGGGCCAAGAGTGTCCTCTGGCG...GTGATGTTGTGAGCTCAGACCAGTCCTGGTGGGGACAGTTGTATGGCCTCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | CCCAAACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTTGATTCCAGGCAGCCCTGGTaGGCCCACTCCATTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKPPAGEKKEGGASCLLDSRQPW*AHSIIP Trigger: GGGGATAATGGAGTGGGCCAACCAGGGCTGCCTGGA...ATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | TTGCCCCTGATCCATGTCCTCTCACGGATCTCCACAGATGACTGCTTCAGGAGTGTCCTACCTCTCCCTTaGACCCAGGGGGCCCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLIHVLSRISTDDCFRSVLPLP*TQGAHV Trigger: GACGTGGGCCCCCTGGGTCAAAGGGAGAGGTAGGAC...ACTCCTGAAGCAGTCATCTGTGGAGATCCGTGAGAGGACATGGATCAGGGGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | CCCATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATGGAGAACCCACACCTGGTCATaGGGCCGCAGCTGGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PISAHVSTLILKNQSQWRTHTWS*GRSWST Trigger: TGTGCTCCAGCTGCGGCCCAATGACCAGGTGTGGGT...TCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | CCCATCTCAGCCCATGTGTCCACCCTCATACTGAAGAACCAGAGCCAATGGAGACAGGCCATTAGGCCCTaGGTCTCCTCGAATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PISAHVSTLILKNQSQWRQAIRP*VSSNAR Trigger: CCTGGCATTCGAGGAGACCAAGGGCCTAATGGCCTG...TCTCCATTGGCTCTGGTTCTTCAGTATGAGGGTGGACACATGGGCTGAGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | ACCAGAGAAGGCAGCCATCCCTACATATGCAAGAATGTCCACCATCCCTACCCCTCCAAGTACTGGCCTTaGCCCTCTCGGAAAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TREGSHPYICKNVHHPYPSKYWP*PSRKGG Trigger: ACCGCCTTTCCGAGAGGGCAAAGGCCAGTACTTGGA...GGGGTAGGGATGGTGGACATTCTTGCATATGTAGGGATGGCTGCCTTCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | TCCAGAGGCCATACAACTGTCCCCACCAGGACTGGTCTGAGCTCACAACATCACAGGGCTACCCACACATaGGTGCCCTTGACATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SRGHTTVPTRTGLSSQHHRATHT*VPLTCT Trigger: TGTGCATGTCAAGGGCACCAATGTGTGGGTAGCCCT...GTGATGTTGTGAGCTCAGACCAGTCCTGGTGGGGACAGTTGTATGGCCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | CCCAAACCCCCAGCAGGTGAGAAGAAAGAGGGAGGGGCATCGTGTTTGCTTGATCTCCTTTCAAGTCCATaGGCAGCATCGGTAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PKPPAGEKKEGGASCLLDLLSSP*AASVEA Trigger: TGCCTCTACCGATGCTGCCAATGGACTTGAAAGGAG...ATCAAGCAAACACGATGCCCCTCCCTCTTTCTTCTCACCTGCTGGGGGTTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | TTGCCCCTGATCCATGTCCTCTCACGGATCTCCACAGATGACTGCTTCAGGAGTAGCCCAAACTGTGGCTaGCCTCCTTTGCCCAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: LPLIHVLSRISTDDCFRSSPNCG*PPLPST Trigger: TGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCT...ACTCCTGAAGCAGTCATCTGTGGAGATCCGTGAGAGGACATGGATCAGGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | TTCTCCCAACAGGAAACAAAAACCTCAGAGAACCTAATGTCGTATCAGATGCTGCCCTCCACGCCACCATaGGGCAGATGCAAGCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSQQETKTSENLMSYQMLPSTPP*GRCKPA Trigger: CGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGGG...CAGCATCTGATACGACATTAGGTTCTCTGAGGTTTTTGTTTCCTGTTGGGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS-3UTR CAA 90 bp | GTCAGTGACATCTACAGCTCCAATCCACAGACGTTTCAGAATCCTTCTCTAAAGCACACATTGGTGCCCTaGACATGCACATGGTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSDIYSSNPQTFQNPSLKHTLVP*TCTWYA Trigger: TGCATACCATGTGCATGTCAAGGGCACCAATGTGTG...CTTTAGAGAAGGATTCTGAAACGTCTGTGGATTGGAGCTGTAGATGTCACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 72 bp | AGGAGGCCCTGGAAGGCCCGGTTCACCCTTCAGGCCTaGCAGACCCTGAGGCCCAATAGGGCCAGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRPWKARFTLQA*QTLRPNRASWA Trigger: GGCCCAGCTGGCCCTATTGGGCCTCAGGGTCTGCCAGGCCTGAAGGGTGAACCGGGCCTTCCAGGGCCTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 72 bp | CGCTGCACCCCCAGCTCCGCCGCCAGAGGACACTCTTaGCCCACACCCCAACAGCAACAGCAGCAGCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RCTPSSAARGHS*PTPQQQQQQRR Trigger: CCTTCGCTGCTGCTGTTGCTGTTGGGGTGTGGGCCAAGAGTGTCCTCTGGCGGCGGAGCTGGGGGTGCAGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070132.7 ENSMUST00000128435.2 |
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| CDS TCA 72 bp | CACTCCTGGGGGACCTCCAGGTCCTACCTCTCCCTTTaGCCCAGGGGGCCCACGTCTACCAGGAAGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HSWGTSRSYLSL*PRGPTSTRKPC Trigger: GCAGGGCTTCCTGGTAGACGTGGGCCCCCTGGGTCAAAGGGAGAGGTAGGACCTGGAGGTCCCCCAGGAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 72 bp | GGGAGCCCAGGCTTCCCAGCCAGGCCATTAGGCCCTTaGTCTCCTCGAATGCCAGGCACTCCTGGGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPGFPARPLGP*SPRMPGTPGGP Trigger: AGGTCCCCCAGGAGTGCCTGGCATTCGAGGAGACCAAGGGCCTAATGGCCTGGCTGGGAAGCCTGGGCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CAA 90 bp | GAATGCCAGGCACTCCTGGGGGACCTCCAGGTCCTACCTCTCCCTTaGACCCAGGGGGCCCACGTCTACCAGGAAGCCCTGCAGACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ECQALLGDLQVLPLP*TQGAHVYQEALQTQ Trigger: CTGGGTCTGCAGGGCTTCCTGGTAGACGTGGGCCCCCTGGGTCAAAGGGAGAGGTAGGACCTGGAGGTCCCCCAGGAGTGCCTGGCATTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 72 bp | CATGGGCTGCACATACTTTACCGGGGCATAGCCCGCTaGACCCCCAGCTCCGCCGCCAGAGGACACTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HGLHILYRGIAR*TPSSAARGHSW Trigger: CCAAGAGTGTCCTCTGGCGGCGGAGCTGGGGGTGCAGCGGGCTATGCCCCGGTAAAGTATGTGCAGCCCATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070132.7 ENSMUST00000128435.2 |
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| CDS CAA 90 bp | GCTGGAGTGGCGTGGGCTGACAGCTCACCGAGCCCAAACTGTGGCTaGCCTCCTTTGCCCAGTACAGCTCCCTCCACGCCACCATTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGVAWADSSPSPNCG*PPLPSTAPSTPPLG Trigger: GCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGTCAGCCCACGCCACTCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 72 bp | CGTGGGCTGACAGCTCACCGAGCCCAAACTGTGGCTTaGCTCCTTTGCCCAGTACAGCTCCCTCCACGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RGLTAHRAQTVA*LLCPVQLPPRH Trigger: GTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGTCAGCCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CAA 72 bp | GCGTGGGCTGACAGCTCACCGAGCCCAAACTGTGGCTaGCCTCCTTTGCCCAGTACAGCTCCCTCCACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AWADSSPSPNCG*PPLPSTAPSTP Trigger: TGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGTCAGCCCACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CAA 90 bp | GCGTGGGCTGACAGCTCACCGAGCCCAAACTGTGGCTTGCCTCCTTaGCCCAGTACAGCTCCCTCCACGCCACCATTGGGCAGATGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: AWADSSPSPNCGLPP*PSTAPSTPPLGRCK Trigger: CTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGTCAGCCCACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 72 bp | CCCAGTACAGCTCCCTCCACGCCACCATTGGGCAGATaGAAGCCTGCGATACCAGTCTCATCCAGGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PSTAPSTPPLGR*KPAIPVSSRAP Trigger: CGGAGCCCTGGATGAGACTGGTATCGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CAA 90 bp | TGTGGCTTGCCTCCTTTGCCCAGTACAGCTCCCTCCACGCCACCATaGGGCAGATGCAAGCCTGCGATACCAGTCTCATCCAGGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CGLPPLPSTAPSTPP*GRCKPAIPVSSRAP Trigger: CGGAGCCCTGGATGAGACTGGTATCGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS TCA 72 bp | AGTGAGCACTGCAGTAAAGGCTGGAGTGGCGTGGGCTaGCAGCTCACCGAGCCCAAACTGTGGCTTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SEHCSKGWSGVG*QLTEPKLWLAS Trigger: GGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGTCAGCCCACGCCACTCCAGCCTTTACTGCAGTGCTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 72 bp | ACAGCTCACCGAGCCCAAACTGTGGCTTGCCTCCTTTaGCCAGTACAGCTCCCTCCACGCCACCATTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TAHRAQTVACLL*PVQLPPRHHWA Trigger: TGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGGCAAGCCACAGTTTGGGCTCGGTGAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 72 bp | AACTGGGCCCCTGTCTCCCTTAGGTCCTGGTTTTCCTaGCATCCCATAGCCAACAGGGCCTATCAGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NWAPVSLRSWFS*HPIANRAYQAR Trigger: CCTGGCCTGATAGGCCCTGTTGGCTATGGGATGCCAGGAAAACCAGGACCTAAGGGAGACAGGGGCCCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CAA 72 bp | CCTCCTTTGCCCAGTACAGCTCCCTCCACGCCACCATaGGGCAGATGCAAGCCTGCGATACCAGTCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLPSTAPSTPP*GRCKPAIPVSS Trigger: GGATGAGACTGGTATCGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CAA 90 bp | GAGGTCCCGGCTTCCCAGGGGGACCTGGCTCTCCTTTCAAGTCCATaGGCAGCATCGGTAGAGGCATTTCCAAGTACTGGCCTTTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EVPASQGDLALLSSP*AASVEAFPSTGLCP Trigger: AGGGCAAAGGCCAGTACTTGGAAATGCCTCTACCGATGCTGCCAATGGACTTGAAAGGAGAGCCAGGTCCCCCTGGGAAGCCGGGACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS GCA 72 bp | GCAGCATCGGTAGAGGCATTTCCAAGTACTGGCCTTTaGCCTCTCGGAAAGGCGGTCCCACGGGTCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AASVEAFPSTGL*PLGKAVPRVLS Trigger: AGAAAGGACCCGTGGGACCGCCTTTCCGAGAGGGCAAAGGCCAGTACTTGGAAATGCCTCTACCGATGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CCA 72 bp | CTCCTTTGCCCAGTACAGCTCCCTCCACGCCACCATTaGGCAGATGCAAGCCTGCGATACCAGTCTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLCPVQLPPRHH*ADASLRYQSHP Trigger: TGGATGAGACTGGTATCGCAGGCTTGCATCTGCCCAATGGTGGCGTGGAGGGAGCTGTACTGGGCAAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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| CDS CAA 72 bp | GCTTCCCAGGGGGACCTGGCTCTCCTTTCAAGTCCATaGGCAGCATCGGTAGAGGCATTTCCAAGTACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASQGDLALLSSP*AASVEAFPSTG Trigger: GCCAGTACTTGGAAATGCCTCTACCGATGCTGCCAATGGACTTGAAAGGAGAGCCAGGTCCCCCTGGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070132.7 |
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